HEADER PROTEIN BINDING 14-JUN-18 6A33 TITLE BINDING AND ENHANCED BINDING BETWEEN KEY IMMUNITY PROTEINS TRAF6 AND TITLE 2 TIFA COMPND MOL_ID: 1; COMPND 2 MOLECULE: TNF RECEPTOR-ASSOCIATED FACTOR 6; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: E3 UBIQUITIN-PROTEIN LIGASE TRAF6,INTERLEUKIN-1 SIGNAL COMPND 5 TRANSDUCER,RING FINGER PROTEIN 85,RING-TYPE E3 UBIQUITIN TRANSFERASE COMPND 6 TRAF6; COMPND 7 EC: 2.3.2.27; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: 15-MER PEPTIDE FROM TRAF-INTERACTING PROTEIN WITH FHA COMPND 11 DOMAIN-CONTAINING PROTEIN A; COMPND 12 CHAIN: I; COMPND 13 SYNONYM: PUTATIVE MAPK-ACTIVATING PROTEIN PM14,PUTATIVE NF-KAPPA-B- COMPND 14 ACTIVATING PROTEIN 20,TRAF2-BINDING PROTEIN; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TRAF6, RNF85; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS COMPLEX, TRAF6, TIFA C-TERMINAL CONSENSUS TRAF-BINDING PEPTIDE 170- KEYWDS 2 184, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR W.C.HUANG,J.H.LIAO,T.C.HSIAO,M.MAESTRE-REYNA,Y.BESSHO,M.D.TSAI REVDAT 3 22-NOV-23 6A33 1 REMARK REVDAT 2 06-FEB-19 6A33 1 JRNL REVDAT 1 05-DEC-18 6A33 0 JRNL AUTH W.C.HUANG,J.H.LIAO,T.C.HSIAO,T.W.WEI,M.MAESTRE-REYNA, JRNL AUTH 2 Y.BESSHO,M.D.TSAI JRNL TITL BINDING AND ENHANCED BINDING BETWEEN KEY IMMUNITY PROTEINS JRNL TITL 2 TRAF6 AND TIFA. JRNL REF CHEMBIOCHEM V. 20 140 2019 JRNL REFN ESSN 1439-7633 JRNL PMID 30378729 JRNL DOI 10.1002/CBIC.201800436 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 16399 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 820 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.4047 - 3.8152 1.00 2882 152 0.1795 0.2054 REMARK 3 2 3.8152 - 3.0286 0.99 2615 138 0.1825 0.3075 REMARK 3 3 3.0286 - 2.6458 0.98 2578 136 0.2067 0.2350 REMARK 3 4 2.6458 - 2.4039 0.98 2523 133 0.2223 0.2566 REMARK 3 5 2.4039 - 2.2316 0.98 2463 130 0.2245 0.3066 REMARK 3 6 2.2316 - 2.1001 0.98 2518 131 0.2493 0.2972 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.090 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.85 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1339 REMARK 3 ANGLE : 0.845 1818 REMARK 3 CHIRALITY : 0.054 196 REMARK 3 PLANARITY : 0.005 237 REMARK 3 DIHEDRAL : 11.296 1103 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 350 THROUGH 376 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.3879 27.3430 -12.0524 REMARK 3 T TENSOR REMARK 3 T11: 0.4698 T22: 0.2377 REMARK 3 T33: 0.3209 T12: 0.0037 REMARK 3 T13: -0.0071 T23: 0.0234 REMARK 3 L TENSOR REMARK 3 L11: 3.9559 L22: 1.2684 REMARK 3 L33: 6.1710 L12: 0.1815 REMARK 3 L13: -1.7470 L23: -0.6185 REMARK 3 S TENSOR REMARK 3 S11: 0.0566 S12: 0.2411 S13: 0.3392 REMARK 3 S21: 0.2055 S22: 0.0336 S23: 0.1710 REMARK 3 S31: -0.6891 S32: 0.0393 S33: -0.0664 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 377 THROUGH 406 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5754 18.7164 -8.6114 REMARK 3 T TENSOR REMARK 3 T11: 0.4555 T22: 0.3019 REMARK 3 T33: 0.3012 T12: -0.0136 REMARK 3 T13: 0.0236 T23: -0.0314 REMARK 3 L TENSOR REMARK 3 L11: 3.6975 L22: 0.8366 REMARK 3 L33: 6.0391 L12: 1.4121 REMARK 3 L13: -3.3178 L23: -2.2142 REMARK 3 S TENSOR REMARK 3 S11: -0.0589 S12: -0.1018 S13: -0.2891 REMARK 3 S21: 0.0608 S22: -0.0712 S23: -0.1233 REMARK 3 S31: -0.1086 S32: 0.4305 S33: 0.1712 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 407 THROUGH 434 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8306 13.4332 -1.5571 REMARK 3 T TENSOR REMARK 3 T11: 0.4261 T22: 0.2386 REMARK 3 T33: 0.2729 T12: 0.0041 REMARK 3 T13: 0.0572 T23: -0.0131 REMARK 3 L TENSOR REMARK 3 L11: 3.0252 L22: 2.5487 REMARK 3 L33: 7.7606 L12: 0.2747 REMARK 3 L13: -1.6947 L23: -3.8294 REMARK 3 S TENSOR REMARK 3 S11: -0.2796 S12: -0.2773 S13: -0.2917 REMARK 3 S21: 0.0338 S22: 0.1027 S23: -0.0338 REMARK 3 S31: 0.2590 S32: -0.2094 S33: 0.1860 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 435 THROUGH 470 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.1087 15.4178 -9.2906 REMARK 3 T TENSOR REMARK 3 T11: 0.3376 T22: 0.2871 REMARK 3 T33: 0.2774 T12: 0.0300 REMARK 3 T13: 0.1058 T23: -0.0447 REMARK 3 L TENSOR REMARK 3 L11: 3.5386 L22: 4.2533 REMARK 3 L33: 5.7425 L12: -0.0907 REMARK 3 L13: 0.4844 L23: -1.9104 REMARK 3 S TENSOR REMARK 3 S11: -0.0128 S12: -0.0269 S13: -0.1924 REMARK 3 S21: -0.0762 S22: 0.0640 S23: 0.2529 REMARK 3 S31: 0.4904 S32: -0.3651 S33: -0.0247 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 471 THROUGH 501 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.6368 24.4026 -16.9930 REMARK 3 T TENSOR REMARK 3 T11: 0.3905 T22: 0.2868 REMARK 3 T33: 0.3177 T12: 0.0103 REMARK 3 T13: 0.0684 T23: -0.0029 REMARK 3 L TENSOR REMARK 3 L11: 2.3530 L22: 3.2606 REMARK 3 L33: 6.2797 L12: 0.8205 REMARK 3 L13: 0.4204 L23: -2.5684 REMARK 3 S TENSOR REMARK 3 S11: -0.0289 S12: 0.0436 S13: 0.2126 REMARK 3 S21: 0.1354 S22: 0.1321 S23: 0.3462 REMARK 3 S31: -0.4249 S32: -0.2027 S33: -0.1481 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'I' AND (RESID 174 THROUGH 184 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.0332 9.4524 -10.8676 REMARK 3 T TENSOR REMARK 3 T11: 0.8934 T22: 0.7622 REMARK 3 T33: 0.6633 T12: 0.0612 REMARK 3 T13: 0.1161 T23: -0.1267 REMARK 3 L TENSOR REMARK 3 L11: 3.6935 L22: 2.7731 REMARK 3 L33: 3.7625 L12: -0.8303 REMARK 3 L13: 0.1828 L23: -1.4930 REMARK 3 S TENSOR REMARK 3 S11: -0.3654 S12: 0.2185 S13: 0.6496 REMARK 3 S21: -0.5162 S22: 0.2391 S23: -1.2137 REMARK 3 S31: -0.0842 S32: 1.9677 S33: -0.2888 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6A33 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1300007646. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL32XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : LIQUID NITROGEN COOLED DOUBLE REMARK 200 CRYSTAL REMARK 200 OPTICS : K-B MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16418 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 41.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.01980 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.4300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.35120 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 5ZUJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES SODIUM, PH 7.5, 1M SODIUM REMARK 280 CITRATE TRIBASIC DIHYDRATE, AND 10 MM TCEP, EVAPORATION, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 112.19000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 224.38000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 168.28500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 280.47500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 56.09500 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 112.19000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 224.38000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 280.47500 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 168.28500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 56.09500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 349 REMARK 465 LEU A 502 REMARK 465 GLU A 503 REMARK 465 HIS A 504 REMARK 465 HIS A 505 REMARK 465 HIS A 506 REMARK 465 HIS A 507 REMARK 465 HIS A 508 REMARK 465 HIS A 509 REMARK 465 SER I 170 REMARK 465 SER I 171 REMARK 465 GLN I 172 REMARK 465 SER I 173 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 356 NZ REMARK 470 LYS A 365 CE NZ REMARK 470 GLN A 401 CG CD OE1 NE2 REMARK 470 ARG A 402 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 439 CG CD OE1 OE2 REMARK 470 MET I 179 CG SD CE REMARK 470 GLU I 183 CG CD OE1 OE2 REMARK 470 SER I 184 CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 437 30.92 -90.77 REMARK 500 THR A 475 60.57 -110.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 717 DISTANCE = 6.05 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5ZUJ RELATED DB: PDB REMARK 900 5ZUJ CONTAINS THE SAME TRAF PROTEIN COMPLEXED WITH TIFA MUTANT C- REMARK 900 TERMINUS CONSENSUS TRAF-BINDING PEPTIDE DBREF 6A33 A 350 501 UNP Q9Y4K3 TRAF6_HUMAN 350 501 DBREF 6A33 I 170 184 UNP Q96CG3 TIFA_HUMAN 170 184 SEQADV 6A33 MET A 349 UNP Q9Y4K3 EXPRESSION TAG SEQADV 6A33 LEU A 502 UNP Q9Y4K3 EXPRESSION TAG SEQADV 6A33 GLU A 503 UNP Q9Y4K3 EXPRESSION TAG SEQADV 6A33 HIS A 504 UNP Q9Y4K3 EXPRESSION TAG SEQADV 6A33 HIS A 505 UNP Q9Y4K3 EXPRESSION TAG SEQADV 6A33 HIS A 506 UNP Q9Y4K3 EXPRESSION TAG SEQADV 6A33 HIS A 507 UNP Q9Y4K3 EXPRESSION TAG SEQADV 6A33 HIS A 508 UNP Q9Y4K3 EXPRESSION TAG SEQADV 6A33 HIS A 509 UNP Q9Y4K3 EXPRESSION TAG SEQRES 1 A 161 MET ASN GLY ILE TYR ILE TRP LYS ILE GLY ASN PHE GLY SEQRES 2 A 161 MET HIS LEU LYS CYS GLN GLU GLU GLU LYS PRO VAL VAL SEQRES 3 A 161 ILE HIS SER PRO GLY PHE TYR THR GLY LYS PRO GLY TYR SEQRES 4 A 161 LYS LEU CYS MET ARG LEU HIS LEU GLN LEU PRO THR ALA SEQRES 5 A 161 GLN ARG CYS ALA ASN TYR ILE SER LEU PHE VAL HIS THR SEQRES 6 A 161 MET GLN GLY GLU TYR ASP SER HIS LEU PRO TRP PRO PHE SEQRES 7 A 161 GLN GLY THR ILE ARG LEU THR ILE LEU ASP GLN SER GLU SEQRES 8 A 161 ALA PRO VAL ARG GLN ASN HIS GLU GLU ILE MET ASP ALA SEQRES 9 A 161 LYS PRO GLU LEU LEU ALA PHE GLN ARG PRO THR ILE PRO SEQRES 10 A 161 ARG ASN PRO LYS GLY PHE GLY TYR VAL THR PHE MET HIS SEQRES 11 A 161 LEU GLU ALA LEU ARG GLN ARG THR PHE ILE LYS ASP ASP SEQRES 12 A 161 THR LEU LEU VAL ARG CYS GLU VAL SER THR LEU GLU HIS SEQRES 13 A 161 HIS HIS HIS HIS HIS SEQRES 1 I 15 SER SER GLN SER SER SER PRO THR GLU MET ASP GLU ASN SEQRES 2 I 15 GLU SER FORMUL 3 HOH *123(H2 O) HELIX 1 AA1 ASN A 359 GLU A 369 1 11 HELIX 2 AA2 TYR A 418 LEU A 422 5 5 HELIX 3 AA3 GLU A 439 ARG A 443 5 5 HELIX 4 AA4 LEU A 456 GLN A 460 5 5 HELIX 5 AA5 GLU A 480 GLN A 484 5 5 SHEET 1 AA1 4 GLY A 351 ILE A 357 0 SHEET 2 AA1 4 LEU A 493 SER A 500 -1 O VAL A 495 N TRP A 355 SHEET 3 AA1 4 THR A 429 ILE A 434 -1 N THR A 429 O SER A 500 SHEET 4 AA1 4 HIS A 446 ASP A 451 -1 O HIS A 446 N ILE A 434 SHEET 1 AA2 3 VAL A 373 HIS A 376 0 SHEET 2 AA2 3 LYS A 388 LEU A 395 -1 O LEU A 393 N ILE A 375 SHEET 3 AA2 3 PHE A 380 TYR A 381 -1 N PHE A 380 O LEU A 389 SHEET 1 AA3 5 VAL A 373 HIS A 376 0 SHEET 2 AA3 5 LYS A 388 LEU A 395 -1 O LEU A 393 N ILE A 375 SHEET 3 AA3 5 TYR A 406 MET A 414 -1 O PHE A 410 N ARG A 392 SHEET 4 AA3 5 LYS A 469 HIS A 478 -1 O MET A 477 N ILE A 407 SHEET 5 AA3 5 THR I 177 ASP I 180 -1 O MET I 179 N GLY A 470 CISPEP 1 LYS A 384 PRO A 385 0 10.27 CISPEP 2 TRP A 424 PRO A 425 0 0.36 CRYST1 51.430 51.430 336.570 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019444 0.011226 0.000000 0.00000 SCALE2 0.000000 0.022452 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002971 0.00000