data_6A7K # _entry.id 6A7K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6A7K pdb_00006a7k 10.2210/pdb6a7k/pdb WWPDB D_1300008174 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6A7K _pdbx_database_status.recvd_initial_deposition_date 2018-07-03 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Umeno, K.' 1 ? 'Misumi, Y.' 2 ? 'Tanaka, H.' 3 ? 'Kurisu, G.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Science _citation.journal_id_ASTM SCIEAS _citation.journal_id_CSD 0038 _citation.journal_id_ISSN 1095-9203 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 363 _citation.language ? _citation.page_first 257 _citation.page_last 260 _citation.title 'Structural adaptations of photosynthetic complex I enable ferredoxin-dependent electron transfer.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1126/science.aau3613 _citation.pdbx_database_id_PubMed 30573545 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Schuller, J.M.' 1 0000-0002-9121-1764 primary 'Birrell, J.A.' 2 ? primary 'Tanaka, H.' 3 0000-0003-2035-954X primary 'Konuma, T.' 4 0000-0002-4412-2849 primary 'Wulfhorst, H.' 5 ? primary 'Cox, N.' 6 0000-0002-7815-6115 primary 'Schuller, S.K.' 7 0000-0002-1800-8014 primary 'Thiemann, J.' 8 0000-0003-0286-2862 primary 'Lubitz, W.' 9 0000-0001-7059-5327 primary 'Setif, P.' 10 0000-0002-6101-4006 primary 'Ikegami, T.' 11 0000-0002-1429-1844 primary 'Engel, B.D.' 12 ? primary 'Kurisu, G.' 13 0000-0002-5354-0807 primary 'Nowaczyk, M.M.' 14 0000-0002-9269-0672 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 6A7K _cell.details ? _cell.formula_units_Z ? _cell.length_a 58.850 _cell.length_a_esd ? _cell.length_b 58.850 _cell.length_b_esd ? _cell.length_c 225.150 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 24 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6A7K _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Tlr0636 protein' 8223.556 2 ? ? ? ? 2 non-polymer syn 'ACETIC ACID' 60.052 2 ? ? ? ? 3 water nat water 18.015 106 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name NdhS # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MATDLIMTILPGMTVKVTNPNDTYYQFQGIVQRITDGKVAVLFEGGNWDKLVTFQASELEPVVVTPKEKAKAKK _entity_poly.pdbx_seq_one_letter_code_can MATDLIMTILPGMTVKVTNPNDTYYQFQGIVQRITDGKVAVLFEGGNWDKLVTFQASELEPVVVTPKEKAKAKK _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 THR n 1 4 ASP n 1 5 LEU n 1 6 ILE n 1 7 MET n 1 8 THR n 1 9 ILE n 1 10 LEU n 1 11 PRO n 1 12 GLY n 1 13 MET n 1 14 THR n 1 15 VAL n 1 16 LYS n 1 17 VAL n 1 18 THR n 1 19 ASN n 1 20 PRO n 1 21 ASN n 1 22 ASP n 1 23 THR n 1 24 TYR n 1 25 TYR n 1 26 GLN n 1 27 PHE n 1 28 GLN n 1 29 GLY n 1 30 ILE n 1 31 VAL n 1 32 GLN n 1 33 ARG n 1 34 ILE n 1 35 THR n 1 36 ASP n 1 37 GLY n 1 38 LYS n 1 39 VAL n 1 40 ALA n 1 41 VAL n 1 42 LEU n 1 43 PHE n 1 44 GLU n 1 45 GLY n 1 46 GLY n 1 47 ASN n 1 48 TRP n 1 49 ASP n 1 50 LYS n 1 51 LEU n 1 52 VAL n 1 53 THR n 1 54 PHE n 1 55 GLN n 1 56 ALA n 1 57 SER n 1 58 GLU n 1 59 LEU n 1 60 GLU n 1 61 PRO n 1 62 VAL n 1 63 VAL n 1 64 VAL n 1 65 THR n 1 66 PRO n 1 67 LYS n 1 68 GLU n 1 69 LYS n 1 70 ALA n 1 71 LYS n 1 72 ALA n 1 73 LYS n 1 74 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 74 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene tlr0636 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain BP-1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermosynechococcus elongatus (strain BP-1)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 197221 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8DL61_THEEB _struct_ref.pdbx_db_accession Q8DL61 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MATDLIMTILPGMTVKVTNPNDTYYQFQGIVQRITDGKVAVLFEGGNWDKLVTFQASELEPVVVTPKEKAKAKK _struct_ref.pdbx_align_begin 37 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6A7K A 1 ? 74 ? Q8DL61 37 ? 110 ? 1 74 2 1 6A7K B 1 ? 74 ? Q8DL61 37 ? 110 ? 1 74 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACY non-polymer . 'ACETIC ACID' ? 'C2 H4 O2' 60.052 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6A7K _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.4 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 64.2 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100mM Sodium acetate trihydrate (pH 4.6), 100mM CdCl2, 38 % (v/v) polyethylene glycol (PEG) 400' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX300HE' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-11-14 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL44XU' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL44XU _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6A7K _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.90 _reflns.d_resolution_low 49.71 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 19195 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.6 _reflns.pdbx_Rmerge_I_obs 0.058 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 29.0 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.94 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 8.25 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2520 _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.399 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 11.6 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.985 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 8.77 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] 8.77 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] -17.55 _refine.B_iso_max ? _refine.B_iso_mean 28.596 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.933 _refine.correlation_coeff_Fo_to_Fc_free 0.931 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6A7K _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.90 _refine.ls_d_res_low 49.71 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 18235 _refine.ls_number_reflns_R_free 960 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.95 _refine.ls_percent_reflns_R_free 5.0 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.21957 _refine.ls_R_factor_R_free 0.23783 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.21858 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 3C4S _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.025 _refine.pdbx_overall_ESU_R_Free 0.024 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 1.858 _refine.overall_SU_ML 0.057 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 948 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 106 _refine_hist.number_atoms_total 1062 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 49.71 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.026 0.020 981 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 923 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 2.109 1.965 1335 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.078 3.000 2144 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 7.381 5.000 121 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 47.192 26.190 42 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 13.190 15.000 166 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 5.359 15.000 2 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.168 0.200 158 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.011 0.021 1077 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 181 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 3.206 2.484 489 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 3.053 2.473 486 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 4.415 3.679 607 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 4.428 3.683 608 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 4.930 2.966 492 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 4.925 2.970 493 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 6.929 4.288 729 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 9.987 32.217 1003 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 9.984 32.259 1004 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 'X-RAY DIFFRACTION' 1 1 1 ? 0.15 0.05 ? ? A 2968 'interatomic distance' ? ? ? 'X-RAY DIFFRACTION' 2 1 2 ? 0.15 0.05 ? ? B 2968 'interatomic distance' ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.900 _refine_ls_shell.d_res_low 1.949 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 68 _refine_ls_shell.number_reflns_R_work 1289 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.213 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.190 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 A 1 2 B 1 # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 0 A ASP 4 . A PRO 61 . A ASP 4 A PRO 61 0 ? 1 2 0 B ASP 4 . B PRO 61 . B ASP 4 B PRO 61 0 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 6A7K _struct.title 'X-ray structure of NdhS from T. elongatus' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6A7K _struct_keywords.text 'NADH dehydrogenase-like complex, NDH-1, cyclic electron flow (CEF), Ferredoxin, ELECTRON TRANSPORT' _struct_keywords.pdbx_keywords 'ELECTRON TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLN A 55 ? SER A 57 ? GLN A 55 SER A 57 5 ? 3 HELX_P HELX_P2 AA2 GLN B 55 ? SER B 57 ? GLN B 55 SER B 57 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 59 ? PRO A 61 ? LEU A 59 PRO A 61 AA1 2 THR A 14 ? VAL A 17 ? THR A 14 VAL A 17 AA1 3 GLN A 28 ? THR A 35 ? GLN A 28 THR A 35 AA1 4 LYS A 38 ? GLY A 45 ? LYS A 38 GLY A 45 AA1 5 TRP A 48 ? PHE A 54 ? TRP A 48 PHE A 54 AA1 6 ILE B 6 ? ILE B 9 ? ILE B 6 ILE B 9 AA2 1 TRP B 48 ? PHE B 54 ? TRP B 48 PHE B 54 AA2 2 LYS B 38 ? GLY B 45 ? LYS B 38 GLY B 45 AA2 3 GLN B 28 ? THR B 35 ? GLN B 28 THR B 35 AA2 4 THR B 14 ? VAL B 17 ? THR B 14 VAL B 17 AA2 5 LEU B 59 ? PRO B 61 ? LEU B 59 PRO B 61 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLU A 60 ? O GLU A 60 N LYS A 16 ? N LYS A 16 AA1 2 3 N VAL A 15 ? N VAL A 15 O GLY A 29 ? O GLY A 29 AA1 3 4 N GLN A 32 ? N GLN A 32 O ALA A 40 ? O ALA A 40 AA1 4 5 N VAL A 41 ? N VAL A 41 O VAL A 52 ? O VAL A 52 AA1 5 6 N ASP A 49 ? N ASP A 49 O ILE B 9 ? O ILE B 9 AA2 1 2 O LYS B 50 ? O LYS B 50 N PHE B 43 ? N PHE B 43 AA2 2 3 O ALA B 40 ? O ALA B 40 N GLN B 32 ? N GLN B 32 AA2 3 4 O GLY B 29 ? O GLY B 29 N VAL B 15 ? N VAL B 15 AA2 4 5 N LYS B 16 ? N LYS B 16 O GLU B 60 ? O GLU B 60 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ACY 101 ? 2 'binding site for residue ACY A 101' AC2 Software B ACY 101 ? 2 'binding site for residue ACY B 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 LYS A 16 ? LYS A 16 . ? 1_555 ? 2 AC1 2 GLU A 60 ? GLU A 60 . ? 1_555 ? 3 AC2 2 THR B 35 ? THR B 35 . ? 1_555 ? 4 AC2 2 ASP B 36 ? ASP B 36 . ? 1_555 ? # _atom_sites.entry_id 6A7K _atom_sites.fract_transf_matrix[1][1] 0.016992 _atom_sites.fract_transf_matrix[1][2] 0.009811 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019621 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004441 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 THR 3 3 3 THR THR A . n A 1 4 ASP 4 4 4 ASP ASP A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 MET 7 7 7 MET MET A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 MET 13 13 13 MET MET A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 ASN 19 19 19 ASN ASN A . n A 1 20 PRO 20 20 20 PRO PRO A . n A 1 21 ASN 21 21 21 ASN ASN A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 THR 23 23 23 THR THR A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 TYR 25 25 25 TYR TYR A . n A 1 26 GLN 26 26 26 GLN GLN A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 GLN 28 28 28 GLN GLN A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 GLN 32 32 32 GLN GLN A . n A 1 33 ARG 33 33 33 ARG ARG A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 GLY 37 37 37 GLY GLY A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 PHE 43 43 43 PHE PHE A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 ASN 47 47 47 ASN ASN A . n A 1 48 TRP 48 48 48 TRP TRP A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 THR 53 53 53 THR THR A . n A 1 54 PHE 54 54 54 PHE PHE A . n A 1 55 GLN 55 55 55 GLN GLN A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 VAL 63 63 ? ? ? A . n A 1 64 VAL 64 64 ? ? ? A . n A 1 65 THR 65 65 ? ? ? A . n A 1 66 PRO 66 66 ? ? ? A . n A 1 67 LYS 67 67 ? ? ? A . n A 1 68 GLU 68 68 ? ? ? A . n A 1 69 LYS 69 69 ? ? ? A . n A 1 70 ALA 70 70 ? ? ? A . n A 1 71 LYS 71 71 ? ? ? A . n A 1 72 ALA 72 72 ? ? ? A . n A 1 73 LYS 73 73 ? ? ? A . n A 1 74 LYS 74 74 ? ? ? A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 ALA 2 2 ? ? ? B . n B 1 3 THR 3 3 ? ? ? B . n B 1 4 ASP 4 4 4 ASP ASP B . n B 1 5 LEU 5 5 5 LEU LEU B . n B 1 6 ILE 6 6 6 ILE ILE B . n B 1 7 MET 7 7 7 MET MET B . n B 1 8 THR 8 8 8 THR THR B . n B 1 9 ILE 9 9 9 ILE ILE B . n B 1 10 LEU 10 10 10 LEU LEU B . n B 1 11 PRO 11 11 11 PRO PRO B . n B 1 12 GLY 12 12 12 GLY GLY B . n B 1 13 MET 13 13 13 MET MET B . n B 1 14 THR 14 14 14 THR THR B . n B 1 15 VAL 15 15 15 VAL VAL B . n B 1 16 LYS 16 16 16 LYS LYS B . n B 1 17 VAL 17 17 17 VAL VAL B . n B 1 18 THR 18 18 18 THR THR B . n B 1 19 ASN 19 19 19 ASN ASN B . n B 1 20 PRO 20 20 20 PRO PRO B . n B 1 21 ASN 21 21 21 ASN ASN B . n B 1 22 ASP 22 22 22 ASP ASP B . n B 1 23 THR 23 23 23 THR THR B . n B 1 24 TYR 24 24 24 TYR TYR B . n B 1 25 TYR 25 25 25 TYR TYR B . n B 1 26 GLN 26 26 26 GLN GLN B . n B 1 27 PHE 27 27 27 PHE PHE B . n B 1 28 GLN 28 28 28 GLN GLN B . n B 1 29 GLY 29 29 29 GLY GLY B . n B 1 30 ILE 30 30 30 ILE ILE B . n B 1 31 VAL 31 31 31 VAL VAL B . n B 1 32 GLN 32 32 32 GLN GLN B . n B 1 33 ARG 33 33 33 ARG ARG B . n B 1 34 ILE 34 34 34 ILE ILE B . n B 1 35 THR 35 35 35 THR THR B . n B 1 36 ASP 36 36 36 ASP ASP B . n B 1 37 GLY 37 37 37 GLY GLY B . n B 1 38 LYS 38 38 38 LYS LYS B . n B 1 39 VAL 39 39 39 VAL VAL B . n B 1 40 ALA 40 40 40 ALA ALA B . n B 1 41 VAL 41 41 41 VAL VAL B . n B 1 42 LEU 42 42 42 LEU LEU B . n B 1 43 PHE 43 43 43 PHE PHE B . n B 1 44 GLU 44 44 44 GLU GLU B . n B 1 45 GLY 45 45 45 GLY GLY B . n B 1 46 GLY 46 46 46 GLY GLY B . n B 1 47 ASN 47 47 47 ASN ASN B . n B 1 48 TRP 48 48 48 TRP TRP B . n B 1 49 ASP 49 49 49 ASP ASP B . n B 1 50 LYS 50 50 50 LYS LYS B . n B 1 51 LEU 51 51 51 LEU LEU B . n B 1 52 VAL 52 52 52 VAL VAL B . n B 1 53 THR 53 53 53 THR THR B . n B 1 54 PHE 54 54 54 PHE PHE B . n B 1 55 GLN 55 55 55 GLN GLN B . n B 1 56 ALA 56 56 56 ALA ALA B . n B 1 57 SER 57 57 57 SER SER B . n B 1 58 GLU 58 58 58 GLU GLU B . n B 1 59 LEU 59 59 59 LEU LEU B . n B 1 60 GLU 60 60 60 GLU GLU B . n B 1 61 PRO 61 61 61 PRO PRO B . n B 1 62 VAL 62 62 62 VAL VAL B . n B 1 63 VAL 63 63 ? ? ? B . n B 1 64 VAL 64 64 ? ? ? B . n B 1 65 THR 65 65 ? ? ? B . n B 1 66 PRO 66 66 ? ? ? B . n B 1 67 LYS 67 67 ? ? ? B . n B 1 68 GLU 68 68 ? ? ? B . n B 1 69 LYS 69 69 ? ? ? B . n B 1 70 ALA 70 70 ? ? ? B . n B 1 71 LYS 71 71 ? ? ? B . n B 1 72 ALA 72 72 ? ? ? B . n B 1 73 LYS 73 73 ? ? ? B . n B 1 74 LYS 74 74 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ACY 1 101 1 ACY ACY A . D 2 ACY 1 101 2 ACY ACY B . E 3 HOH 1 201 68 HOH HOH A . E 3 HOH 2 202 90 HOH HOH A . E 3 HOH 3 203 89 HOH HOH A . E 3 HOH 4 204 69 HOH HOH A . E 3 HOH 5 205 26 HOH HOH A . E 3 HOH 6 206 35 HOH HOH A . E 3 HOH 7 207 45 HOH HOH A . E 3 HOH 8 208 103 HOH HOH A . E 3 HOH 9 209 7 HOH HOH A . E 3 HOH 10 210 43 HOH HOH A . E 3 HOH 11 211 46 HOH HOH A . E 3 HOH 12 212 28 HOH HOH A . E 3 HOH 13 213 20 HOH HOH A . E 3 HOH 14 214 47 HOH HOH A . E 3 HOH 15 215 39 HOH HOH A . E 3 HOH 16 216 108 HOH HOH A . E 3 HOH 17 217 16 HOH HOH A . E 3 HOH 18 218 14 HOH HOH A . E 3 HOH 19 219 5 HOH HOH A . E 3 HOH 20 220 41 HOH HOH A . E 3 HOH 21 221 24 HOH HOH A . E 3 HOH 22 222 37 HOH HOH A . E 3 HOH 23 223 84 HOH HOH A . E 3 HOH 24 224 48 HOH HOH A . E 3 HOH 25 225 86 HOH HOH A . E 3 HOH 26 226 36 HOH HOH A . E 3 HOH 27 227 27 HOH HOH A . E 3 HOH 28 228 3 HOH HOH A . E 3 HOH 29 229 75 HOH HOH A . E 3 HOH 30 230 109 HOH HOH A . E 3 HOH 31 231 99 HOH HOH A . E 3 HOH 32 232 60 HOH HOH A . E 3 HOH 33 233 105 HOH HOH A . E 3 HOH 34 234 15 HOH HOH A . E 3 HOH 35 235 106 HOH HOH A . E 3 HOH 36 236 25 HOH HOH A . E 3 HOH 37 237 55 HOH HOH A . E 3 HOH 38 238 87 HOH HOH A . E 3 HOH 39 239 51 HOH HOH A . E 3 HOH 40 240 98 HOH HOH A . E 3 HOH 41 241 63 HOH HOH A . E 3 HOH 42 242 101 HOH HOH A . E 3 HOH 43 243 64 HOH HOH A . E 3 HOH 44 244 9 HOH HOH A . E 3 HOH 45 245 93 HOH HOH A . E 3 HOH 46 246 33 HOH HOH A . E 3 HOH 47 247 80 HOH HOH A . E 3 HOH 48 248 94 HOH HOH A . F 3 HOH 1 201 23 HOH HOH B . F 3 HOH 2 202 78 HOH HOH B . F 3 HOH 3 203 56 HOH HOH B . F 3 HOH 4 204 70 HOH HOH B . F 3 HOH 5 205 6 HOH HOH B . F 3 HOH 6 206 49 HOH HOH B . F 3 HOH 7 207 1 HOH HOH B . F 3 HOH 8 208 8 HOH HOH B . F 3 HOH 9 209 42 HOH HOH B . F 3 HOH 10 210 21 HOH HOH B . F 3 HOH 11 211 2 HOH HOH B . F 3 HOH 12 212 17 HOH HOH B . F 3 HOH 13 213 88 HOH HOH B . F 3 HOH 14 214 31 HOH HOH B . F 3 HOH 15 215 54 HOH HOH B . F 3 HOH 16 216 12 HOH HOH B . F 3 HOH 17 217 29 HOH HOH B . F 3 HOH 18 218 4 HOH HOH B . F 3 HOH 19 219 19 HOH HOH B . F 3 HOH 20 220 18 HOH HOH B . F 3 HOH 21 221 22 HOH HOH B . F 3 HOH 22 222 85 HOH HOH B . F 3 HOH 23 223 79 HOH HOH B . F 3 HOH 24 224 10 HOH HOH B . F 3 HOH 25 225 52 HOH HOH B . F 3 HOH 26 226 100 HOH HOH B . F 3 HOH 27 227 72 HOH HOH B . F 3 HOH 28 228 13 HOH HOH B . F 3 HOH 29 229 97 HOH HOH B . F 3 HOH 30 230 92 HOH HOH B . F 3 HOH 31 231 38 HOH HOH B . F 3 HOH 32 232 50 HOH HOH B . F 3 HOH 33 233 83 HOH HOH B . F 3 HOH 34 234 59 HOH HOH B . F 3 HOH 35 235 102 HOH HOH B . F 3 HOH 36 236 104 HOH HOH B . F 3 HOH 37 237 66 HOH HOH B . F 3 HOH 38 238 53 HOH HOH B . F 3 HOH 39 239 65 HOH HOH B . F 3 HOH 40 240 32 HOH HOH B . F 3 HOH 41 241 81 HOH HOH B . F 3 HOH 42 242 91 HOH HOH B . F 3 HOH 43 243 62 HOH HOH B . F 3 HOH 44 244 74 HOH HOH B . F 3 HOH 45 245 76 HOH HOH B . F 3 HOH 46 246 40 HOH HOH B . F 3 HOH 47 247 58 HOH HOH B . F 3 HOH 48 248 11 HOH HOH B . F 3 HOH 49 249 71 HOH HOH B . F 3 HOH 50 250 30 HOH HOH B . F 3 HOH 51 251 73 HOH HOH B . F 3 HOH 52 252 57 HOH HOH B . F 3 HOH 53 253 44 HOH HOH B . F 3 HOH 54 254 34 HOH HOH B . F 3 HOH 55 255 77 HOH HOH B . F 3 HOH 56 256 107 HOH HOH B . F 3 HOH 57 257 61 HOH HOH B . F 3 HOH 58 258 82 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 3 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E 2 1 B,D,F 3 1 A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 3 'ABSA (A^2)' 1370 ? 3 MORE -0 ? 3 'SSA (A^2)' 7630 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-01-16 2 'Structure model' 1 1 2019-01-30 3 'Structure model' 1 2 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' pdbx_initial_refinement_model 6 3 'Structure model' struct_ncs_dom_lim # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.year' 5 3 'Structure model' '_database_2.pdbx_DOI' 6 3 'Structure model' '_database_2.pdbx_database_accession' 7 3 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 8 3 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 9 3 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 10 3 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 11 3 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 12 3 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 13 3 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 14 3 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0189 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 'VERSION Jan 26, 2018' 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 'VERSION Jan 26, 2018' 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.8.2 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 239 ? ? O B HOH 257 ? ? 1.80 2 1 O B HOH 244 ? ? O B HOH 247 ? ? 1.87 3 1 O B HOH 242 ? ? O B HOH 249 ? ? 1.92 4 1 O B HOH 234 ? ? O B HOH 247 ? ? 1.95 5 1 O A HOH 234 ? ? O A HOH 244 ? ? 2.05 6 1 O A HOH 235 ? ? O A HOH 240 ? ? 2.11 7 1 O A HOH 202 ? ? O A HOH 243 ? ? 2.11 8 1 OE1 A GLU 58 ? ? O A HOH 201 ? ? 2.14 9 1 O B HOH 251 ? ? O B HOH 255 ? ? 2.16 10 1 O A HOH 204 ? ? O A HOH 229 ? ? 2.16 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O B HOH 248 ? ? 1_555 O B HOH 248 ? ? 9_555 1.63 2 1 O B HOH 248 ? ? 1_555 O B HOH 250 ? ? 9_555 1.94 3 1 O A HOH 222 ? ? 1_555 O B HOH 246 ? ? 6_554 2.14 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 49 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 49 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD1 _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 49 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 125.21 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 6.91 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 26 ? ? 78.68 -18.11 2 1 GLN B 26 ? ? 75.12 -10.44 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A VAL 63 ? A VAL 63 2 1 Y 1 A VAL 64 ? A VAL 64 3 1 Y 1 A THR 65 ? A THR 65 4 1 Y 1 A PRO 66 ? A PRO 66 5 1 Y 1 A LYS 67 ? A LYS 67 6 1 Y 1 A GLU 68 ? A GLU 68 7 1 Y 1 A LYS 69 ? A LYS 69 8 1 Y 1 A ALA 70 ? A ALA 70 9 1 Y 1 A LYS 71 ? A LYS 71 10 1 Y 1 A ALA 72 ? A ALA 72 11 1 Y 1 A LYS 73 ? A LYS 73 12 1 Y 1 A LYS 74 ? A LYS 74 13 1 Y 1 B MET 1 ? B MET 1 14 1 Y 1 B ALA 2 ? B ALA 2 15 1 Y 1 B THR 3 ? B THR 3 16 1 Y 1 B VAL 63 ? B VAL 63 17 1 Y 1 B VAL 64 ? B VAL 64 18 1 Y 1 B THR 65 ? B THR 65 19 1 Y 1 B PRO 66 ? B PRO 66 20 1 Y 1 B LYS 67 ? B LYS 67 21 1 Y 1 B GLU 68 ? B GLU 68 22 1 Y 1 B LYS 69 ? B LYS 69 23 1 Y 1 B ALA 70 ? B ALA 70 24 1 Y 1 B LYS 71 ? B LYS 71 25 1 Y 1 B ALA 72 ? B ALA 72 26 1 Y 1 B LYS 73 ? B LYS 73 27 1 Y 1 B LYS 74 ? B LYS 74 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACY C C N N 1 ACY O O N N 2 ACY OXT O N N 3 ACY CH3 C N N 4 ACY HXT H N N 5 ACY H1 H N N 6 ACY H2 H N N 7 ACY H3 H N N 8 ALA N N N N 9 ALA CA C N S 10 ALA C C N N 11 ALA O O N N 12 ALA CB C N N 13 ALA OXT O N N 14 ALA H H N N 15 ALA H2 H N N 16 ALA HA H N N 17 ALA HB1 H N N 18 ALA HB2 H N N 19 ALA HB3 H N N 20 ALA HXT H N N 21 ARG N N N N 22 ARG CA C N S 23 ARG C C N N 24 ARG O O N N 25 ARG CB C N N 26 ARG CG C N N 27 ARG CD C N N 28 ARG NE N N N 29 ARG CZ C N N 30 ARG NH1 N N N 31 ARG NH2 N N N 32 ARG OXT O N N 33 ARG H H N N 34 ARG H2 H N N 35 ARG HA H N N 36 ARG HB2 H N N 37 ARG HB3 H N N 38 ARG HG2 H N N 39 ARG HG3 H N N 40 ARG HD2 H N N 41 ARG HD3 H N N 42 ARG HE H N N 43 ARG HH11 H N N 44 ARG HH12 H N N 45 ARG HH21 H N N 46 ARG HH22 H N N 47 ARG HXT H N N 48 ASN N N N N 49 ASN CA C N S 50 ASN C C N N 51 ASN O O N N 52 ASN CB C N N 53 ASN CG C N N 54 ASN OD1 O N N 55 ASN ND2 N N N 56 ASN OXT O N N 57 ASN H H N N 58 ASN H2 H N N 59 ASN HA H N N 60 ASN HB2 H N N 61 ASN HB3 H N N 62 ASN HD21 H N N 63 ASN HD22 H N N 64 ASN HXT H N N 65 ASP N N N N 66 ASP CA C N S 67 ASP C C N N 68 ASP O O N N 69 ASP CB C N N 70 ASP CG C N N 71 ASP OD1 O N N 72 ASP OD2 O N N 73 ASP OXT O N N 74 ASP H H N N 75 ASP H2 H N N 76 ASP HA H N N 77 ASP HB2 H N N 78 ASP HB3 H N N 79 ASP HD2 H N N 80 ASP HXT H N N 81 GLN N N N N 82 GLN CA C N S 83 GLN C C N N 84 GLN O O N N 85 GLN CB C N N 86 GLN CG C N N 87 GLN CD C N N 88 GLN OE1 O N N 89 GLN NE2 N N N 90 GLN OXT O N N 91 GLN H H N N 92 GLN H2 H N N 93 GLN HA H N N 94 GLN HB2 H N N 95 GLN HB3 H N N 96 GLN HG2 H N N 97 GLN HG3 H N N 98 GLN HE21 H N N 99 GLN HE22 H N N 100 GLN HXT H N N 101 GLU N N N N 102 GLU CA C N S 103 GLU C C N N 104 GLU O O N N 105 GLU CB C N N 106 GLU CG C N N 107 GLU CD C N N 108 GLU OE1 O N N 109 GLU OE2 O N N 110 GLU OXT O N N 111 GLU H H N N 112 GLU H2 H N N 113 GLU HA H N N 114 GLU HB2 H N N 115 GLU HB3 H N N 116 GLU HG2 H N N 117 GLU HG3 H N N 118 GLU HE2 H N N 119 GLU HXT H N N 120 GLY N N N N 121 GLY CA C N N 122 GLY C C N N 123 GLY O O N N 124 GLY OXT O N N 125 GLY H H N N 126 GLY H2 H N N 127 GLY HA2 H N N 128 GLY HA3 H N N 129 GLY HXT H N N 130 HOH O O N N 131 HOH H1 H N N 132 HOH H2 H N N 133 ILE N N N N 134 ILE CA C N S 135 ILE C C N N 136 ILE O O N N 137 ILE CB C N S 138 ILE CG1 C N N 139 ILE CG2 C N N 140 ILE CD1 C N N 141 ILE OXT O N N 142 ILE H H N N 143 ILE H2 H N N 144 ILE HA H N N 145 ILE HB H N N 146 ILE HG12 H N N 147 ILE HG13 H N N 148 ILE HG21 H N N 149 ILE HG22 H N N 150 ILE HG23 H N N 151 ILE HD11 H N N 152 ILE HD12 H N N 153 ILE HD13 H N N 154 ILE HXT H N N 155 LEU N N N N 156 LEU CA C N S 157 LEU C C N N 158 LEU O O N N 159 LEU CB C N N 160 LEU CG C N N 161 LEU CD1 C N N 162 LEU CD2 C N N 163 LEU OXT O N N 164 LEU H H N N 165 LEU H2 H N N 166 LEU HA H N N 167 LEU HB2 H N N 168 LEU HB3 H N N 169 LEU HG H N N 170 LEU HD11 H N N 171 LEU HD12 H N N 172 LEU HD13 H N N 173 LEU HD21 H N N 174 LEU HD22 H N N 175 LEU HD23 H N N 176 LEU HXT H N N 177 LYS N N N N 178 LYS CA C N S 179 LYS C C N N 180 LYS O O N N 181 LYS CB C N N 182 LYS CG C N N 183 LYS CD C N N 184 LYS CE C N N 185 LYS NZ N N N 186 LYS OXT O N N 187 LYS H H N N 188 LYS H2 H N N 189 LYS HA H N N 190 LYS HB2 H N N 191 LYS HB3 H N N 192 LYS HG2 H N N 193 LYS HG3 H N N 194 LYS HD2 H N N 195 LYS HD3 H N N 196 LYS HE2 H N N 197 LYS HE3 H N N 198 LYS HZ1 H N N 199 LYS HZ2 H N N 200 LYS HZ3 H N N 201 LYS HXT H N N 202 MET N N N N 203 MET CA C N S 204 MET C C N N 205 MET O O N N 206 MET CB C N N 207 MET CG C N N 208 MET SD S N N 209 MET CE C N N 210 MET OXT O N N 211 MET H H N N 212 MET H2 H N N 213 MET HA H N N 214 MET HB2 H N N 215 MET HB3 H N N 216 MET HG2 H N N 217 MET HG3 H N N 218 MET HE1 H N N 219 MET HE2 H N N 220 MET HE3 H N N 221 MET HXT H N N 222 PHE N N N N 223 PHE CA C N S 224 PHE C C N N 225 PHE O O N N 226 PHE CB C N N 227 PHE CG C Y N 228 PHE CD1 C Y N 229 PHE CD2 C Y N 230 PHE CE1 C Y N 231 PHE CE2 C Y N 232 PHE CZ C Y N 233 PHE OXT O N N 234 PHE H H N N 235 PHE H2 H N N 236 PHE HA H N N 237 PHE HB2 H N N 238 PHE HB3 H N N 239 PHE HD1 H N N 240 PHE HD2 H N N 241 PHE HE1 H N N 242 PHE HE2 H N N 243 PHE HZ H N N 244 PHE HXT H N N 245 PRO N N N N 246 PRO CA C N S 247 PRO C C N N 248 PRO O O N N 249 PRO CB C N N 250 PRO CG C N N 251 PRO CD C N N 252 PRO OXT O N N 253 PRO H H N N 254 PRO HA H N N 255 PRO HB2 H N N 256 PRO HB3 H N N 257 PRO HG2 H N N 258 PRO HG3 H N N 259 PRO HD2 H N N 260 PRO HD3 H N N 261 PRO HXT H N N 262 SER N N N N 263 SER CA C N S 264 SER C C N N 265 SER O O N N 266 SER CB C N N 267 SER OG O N N 268 SER OXT O N N 269 SER H H N N 270 SER H2 H N N 271 SER HA H N N 272 SER HB2 H N N 273 SER HB3 H N N 274 SER HG H N N 275 SER HXT H N N 276 THR N N N N 277 THR CA C N S 278 THR C C N N 279 THR O O N N 280 THR CB C N R 281 THR OG1 O N N 282 THR CG2 C N N 283 THR OXT O N N 284 THR H H N N 285 THR H2 H N N 286 THR HA H N N 287 THR HB H N N 288 THR HG1 H N N 289 THR HG21 H N N 290 THR HG22 H N N 291 THR HG23 H N N 292 THR HXT H N N 293 TRP N N N N 294 TRP CA C N S 295 TRP C C N N 296 TRP O O N N 297 TRP CB C N N 298 TRP CG C Y N 299 TRP CD1 C Y N 300 TRP CD2 C Y N 301 TRP NE1 N Y N 302 TRP CE2 C Y N 303 TRP CE3 C Y N 304 TRP CZ2 C Y N 305 TRP CZ3 C Y N 306 TRP CH2 C Y N 307 TRP OXT O N N 308 TRP H H N N 309 TRP H2 H N N 310 TRP HA H N N 311 TRP HB2 H N N 312 TRP HB3 H N N 313 TRP HD1 H N N 314 TRP HE1 H N N 315 TRP HE3 H N N 316 TRP HZ2 H N N 317 TRP HZ3 H N N 318 TRP HH2 H N N 319 TRP HXT H N N 320 TYR N N N N 321 TYR CA C N S 322 TYR C C N N 323 TYR O O N N 324 TYR CB C N N 325 TYR CG C Y N 326 TYR CD1 C Y N 327 TYR CD2 C Y N 328 TYR CE1 C Y N 329 TYR CE2 C Y N 330 TYR CZ C Y N 331 TYR OH O N N 332 TYR OXT O N N 333 TYR H H N N 334 TYR H2 H N N 335 TYR HA H N N 336 TYR HB2 H N N 337 TYR HB3 H N N 338 TYR HD1 H N N 339 TYR HD2 H N N 340 TYR HE1 H N N 341 TYR HE2 H N N 342 TYR HH H N N 343 TYR HXT H N N 344 VAL N N N N 345 VAL CA C N S 346 VAL C C N N 347 VAL O O N N 348 VAL CB C N N 349 VAL CG1 C N N 350 VAL CG2 C N N 351 VAL OXT O N N 352 VAL H H N N 353 VAL H2 H N N 354 VAL HA H N N 355 VAL HB H N N 356 VAL HG11 H N N 357 VAL HG12 H N N 358 VAL HG13 H N N 359 VAL HG21 H N N 360 VAL HG22 H N N 361 VAL HG23 H N N 362 VAL HXT H N N 363 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACY C O doub N N 1 ACY C OXT sing N N 2 ACY C CH3 sing N N 3 ACY OXT HXT sing N N 4 ACY CH3 H1 sing N N 5 ACY CH3 H2 sing N N 6 ACY CH3 H3 sing N N 7 ALA N CA sing N N 8 ALA N H sing N N 9 ALA N H2 sing N N 10 ALA CA C sing N N 11 ALA CA CB sing N N 12 ALA CA HA sing N N 13 ALA C O doub N N 14 ALA C OXT sing N N 15 ALA CB HB1 sing N N 16 ALA CB HB2 sing N N 17 ALA CB HB3 sing N N 18 ALA OXT HXT sing N N 19 ARG N CA sing N N 20 ARG N H sing N N 21 ARG N H2 sing N N 22 ARG CA C sing N N 23 ARG CA CB sing N N 24 ARG CA HA sing N N 25 ARG C O doub N N 26 ARG C OXT sing N N 27 ARG CB CG sing N N 28 ARG CB HB2 sing N N 29 ARG CB HB3 sing N N 30 ARG CG CD sing N N 31 ARG CG HG2 sing N N 32 ARG CG HG3 sing N N 33 ARG CD NE sing N N 34 ARG CD HD2 sing N N 35 ARG CD HD3 sing N N 36 ARG NE CZ sing N N 37 ARG NE HE sing N N 38 ARG CZ NH1 sing N N 39 ARG CZ NH2 doub N N 40 ARG NH1 HH11 sing N N 41 ARG NH1 HH12 sing N N 42 ARG NH2 HH21 sing N N 43 ARG NH2 HH22 sing N N 44 ARG OXT HXT sing N N 45 ASN N CA sing N N 46 ASN N H sing N N 47 ASN N H2 sing N N 48 ASN CA C sing N N 49 ASN CA CB sing N N 50 ASN CA HA sing N N 51 ASN C O doub N N 52 ASN C OXT sing N N 53 ASN CB CG sing N N 54 ASN CB HB2 sing N N 55 ASN CB HB3 sing N N 56 ASN CG OD1 doub N N 57 ASN CG ND2 sing N N 58 ASN ND2 HD21 sing N N 59 ASN ND2 HD22 sing N N 60 ASN OXT HXT sing N N 61 ASP N CA sing N N 62 ASP N H sing N N 63 ASP N H2 sing N N 64 ASP CA C sing N N 65 ASP CA CB sing N N 66 ASP CA HA sing N N 67 ASP C O doub N N 68 ASP C OXT sing N N 69 ASP CB CG sing N N 70 ASP CB HB2 sing N N 71 ASP CB HB3 sing N N 72 ASP CG OD1 doub N N 73 ASP CG OD2 sing N N 74 ASP OD2 HD2 sing N N 75 ASP OXT HXT sing N N 76 GLN N CA sing N N 77 GLN N H sing N N 78 GLN N H2 sing N N 79 GLN CA C sing N N 80 GLN CA CB sing N N 81 GLN CA HA sing N N 82 GLN C O doub N N 83 GLN C OXT sing N N 84 GLN CB CG sing N N 85 GLN CB HB2 sing N N 86 GLN CB HB3 sing N N 87 GLN CG CD sing N N 88 GLN CG HG2 sing N N 89 GLN CG HG3 sing N N 90 GLN CD OE1 doub N N 91 GLN CD NE2 sing N N 92 GLN NE2 HE21 sing N N 93 GLN NE2 HE22 sing N N 94 GLN OXT HXT sing N N 95 GLU N CA sing N N 96 GLU N H sing N N 97 GLU N H2 sing N N 98 GLU CA C sing N N 99 GLU CA CB sing N N 100 GLU CA HA sing N N 101 GLU C O doub N N 102 GLU C OXT sing N N 103 GLU CB CG sing N N 104 GLU CB HB2 sing N N 105 GLU CB HB3 sing N N 106 GLU CG CD sing N N 107 GLU CG HG2 sing N N 108 GLU CG HG3 sing N N 109 GLU CD OE1 doub N N 110 GLU CD OE2 sing N N 111 GLU OE2 HE2 sing N N 112 GLU OXT HXT sing N N 113 GLY N CA sing N N 114 GLY N H sing N N 115 GLY N H2 sing N N 116 GLY CA C sing N N 117 GLY CA HA2 sing N N 118 GLY CA HA3 sing N N 119 GLY C O doub N N 120 GLY C OXT sing N N 121 GLY OXT HXT sing N N 122 HOH O H1 sing N N 123 HOH O H2 sing N N 124 ILE N CA sing N N 125 ILE N H sing N N 126 ILE N H2 sing N N 127 ILE CA C sing N N 128 ILE CA CB sing N N 129 ILE CA HA sing N N 130 ILE C O doub N N 131 ILE C OXT sing N N 132 ILE CB CG1 sing N N 133 ILE CB CG2 sing N N 134 ILE CB HB sing N N 135 ILE CG1 CD1 sing N N 136 ILE CG1 HG12 sing N N 137 ILE CG1 HG13 sing N N 138 ILE CG2 HG21 sing N N 139 ILE CG2 HG22 sing N N 140 ILE CG2 HG23 sing N N 141 ILE CD1 HD11 sing N N 142 ILE CD1 HD12 sing N N 143 ILE CD1 HD13 sing N N 144 ILE OXT HXT sing N N 145 LEU N CA sing N N 146 LEU N H sing N N 147 LEU N H2 sing N N 148 LEU CA C sing N N 149 LEU CA CB sing N N 150 LEU CA HA sing N N 151 LEU C O doub N N 152 LEU C OXT sing N N 153 LEU CB CG sing N N 154 LEU CB HB2 sing N N 155 LEU CB HB3 sing N N 156 LEU CG CD1 sing N N 157 LEU CG CD2 sing N N 158 LEU CG HG sing N N 159 LEU CD1 HD11 sing N N 160 LEU CD1 HD12 sing N N 161 LEU CD1 HD13 sing N N 162 LEU CD2 HD21 sing N N 163 LEU CD2 HD22 sing N N 164 LEU CD2 HD23 sing N N 165 LEU OXT HXT sing N N 166 LYS N CA sing N N 167 LYS N H sing N N 168 LYS N H2 sing N N 169 LYS CA C sing N N 170 LYS CA CB sing N N 171 LYS CA HA sing N N 172 LYS C O doub N N 173 LYS C OXT sing N N 174 LYS CB CG sing N N 175 LYS CB HB2 sing N N 176 LYS CB HB3 sing N N 177 LYS CG CD sing N N 178 LYS CG HG2 sing N N 179 LYS CG HG3 sing N N 180 LYS CD CE sing N N 181 LYS CD HD2 sing N N 182 LYS CD HD3 sing N N 183 LYS CE NZ sing N N 184 LYS CE HE2 sing N N 185 LYS CE HE3 sing N N 186 LYS NZ HZ1 sing N N 187 LYS NZ HZ2 sing N N 188 LYS NZ HZ3 sing N N 189 LYS OXT HXT sing N N 190 MET N CA sing N N 191 MET N H sing N N 192 MET N H2 sing N N 193 MET CA C sing N N 194 MET CA CB sing N N 195 MET CA HA sing N N 196 MET C O doub N N 197 MET C OXT sing N N 198 MET CB CG sing N N 199 MET CB HB2 sing N N 200 MET CB HB3 sing N N 201 MET CG SD sing N N 202 MET CG HG2 sing N N 203 MET CG HG3 sing N N 204 MET SD CE sing N N 205 MET CE HE1 sing N N 206 MET CE HE2 sing N N 207 MET CE HE3 sing N N 208 MET OXT HXT sing N N 209 PHE N CA sing N N 210 PHE N H sing N N 211 PHE N H2 sing N N 212 PHE CA C sing N N 213 PHE CA CB sing N N 214 PHE CA HA sing N N 215 PHE C O doub N N 216 PHE C OXT sing N N 217 PHE CB CG sing N N 218 PHE CB HB2 sing N N 219 PHE CB HB3 sing N N 220 PHE CG CD1 doub Y N 221 PHE CG CD2 sing Y N 222 PHE CD1 CE1 sing Y N 223 PHE CD1 HD1 sing N N 224 PHE CD2 CE2 doub Y N 225 PHE CD2 HD2 sing N N 226 PHE CE1 CZ doub Y N 227 PHE CE1 HE1 sing N N 228 PHE CE2 CZ sing Y N 229 PHE CE2 HE2 sing N N 230 PHE CZ HZ sing N N 231 PHE OXT HXT sing N N 232 PRO N CA sing N N 233 PRO N CD sing N N 234 PRO N H sing N N 235 PRO CA C sing N N 236 PRO CA CB sing N N 237 PRO CA HA sing N N 238 PRO C O doub N N 239 PRO C OXT sing N N 240 PRO CB CG sing N N 241 PRO CB HB2 sing N N 242 PRO CB HB3 sing N N 243 PRO CG CD sing N N 244 PRO CG HG2 sing N N 245 PRO CG HG3 sing N N 246 PRO CD HD2 sing N N 247 PRO CD HD3 sing N N 248 PRO OXT HXT sing N N 249 SER N CA sing N N 250 SER N H sing N N 251 SER N H2 sing N N 252 SER CA C sing N N 253 SER CA CB sing N N 254 SER CA HA sing N N 255 SER C O doub N N 256 SER C OXT sing N N 257 SER CB OG sing N N 258 SER CB HB2 sing N N 259 SER CB HB3 sing N N 260 SER OG HG sing N N 261 SER OXT HXT sing N N 262 THR N CA sing N N 263 THR N H sing N N 264 THR N H2 sing N N 265 THR CA C sing N N 266 THR CA CB sing N N 267 THR CA HA sing N N 268 THR C O doub N N 269 THR C OXT sing N N 270 THR CB OG1 sing N N 271 THR CB CG2 sing N N 272 THR CB HB sing N N 273 THR OG1 HG1 sing N N 274 THR CG2 HG21 sing N N 275 THR CG2 HG22 sing N N 276 THR CG2 HG23 sing N N 277 THR OXT HXT sing N N 278 TRP N CA sing N N 279 TRP N H sing N N 280 TRP N H2 sing N N 281 TRP CA C sing N N 282 TRP CA CB sing N N 283 TRP CA HA sing N N 284 TRP C O doub N N 285 TRP C OXT sing N N 286 TRP CB CG sing N N 287 TRP CB HB2 sing N N 288 TRP CB HB3 sing N N 289 TRP CG CD1 doub Y N 290 TRP CG CD2 sing Y N 291 TRP CD1 NE1 sing Y N 292 TRP CD1 HD1 sing N N 293 TRP CD2 CE2 doub Y N 294 TRP CD2 CE3 sing Y N 295 TRP NE1 CE2 sing Y N 296 TRP NE1 HE1 sing N N 297 TRP CE2 CZ2 sing Y N 298 TRP CE3 CZ3 doub Y N 299 TRP CE3 HE3 sing N N 300 TRP CZ2 CH2 doub Y N 301 TRP CZ2 HZ2 sing N N 302 TRP CZ3 CH2 sing Y N 303 TRP CZ3 HZ3 sing N N 304 TRP CH2 HH2 sing N N 305 TRP OXT HXT sing N N 306 TYR N CA sing N N 307 TYR N H sing N N 308 TYR N H2 sing N N 309 TYR CA C sing N N 310 TYR CA CB sing N N 311 TYR CA HA sing N N 312 TYR C O doub N N 313 TYR C OXT sing N N 314 TYR CB CG sing N N 315 TYR CB HB2 sing N N 316 TYR CB HB3 sing N N 317 TYR CG CD1 doub Y N 318 TYR CG CD2 sing Y N 319 TYR CD1 CE1 sing Y N 320 TYR CD1 HD1 sing N N 321 TYR CD2 CE2 doub Y N 322 TYR CD2 HD2 sing N N 323 TYR CE1 CZ doub Y N 324 TYR CE1 HE1 sing N N 325 TYR CE2 CZ sing Y N 326 TYR CE2 HE2 sing N N 327 TYR CZ OH sing N N 328 TYR OH HH sing N N 329 TYR OXT HXT sing N N 330 VAL N CA sing N N 331 VAL N H sing N N 332 VAL N H2 sing N N 333 VAL CA C sing N N 334 VAL CA CB sing N N 335 VAL CA HA sing N N 336 VAL C O doub N N 337 VAL C OXT sing N N 338 VAL CB CG1 sing N N 339 VAL CB CG2 sing N N 340 VAL CB HB sing N N 341 VAL CG1 HG11 sing N N 342 VAL CG1 HG12 sing N N 343 VAL CG1 HG13 sing N N 344 VAL CG2 HG21 sing N N 345 VAL CG2 HG22 sing N N 346 VAL CG2 HG23 sing N N 347 VAL OXT HXT sing N N 348 # _pdbx_audit_support.funding_organization 'Japan Science and Technology' _pdbx_audit_support.country Japan _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ACETIC ACID' ACY 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3C4S _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details 'Purified NdhS sample is a monomer' #