data_6ANY # _entry.id 6ANY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6ANY pdb_00006any 10.2210/pdb6any/pdb WWPDB D_1000229527 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6ANY _pdbx_database_status.recvd_initial_deposition_date 2017-08-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Asojo, O.A.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID 0000-0002-4043-2700 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Int. J. Parasitol.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1879-0135 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 48 _citation.language ? _citation.page_first 371 _citation.page_last 378 _citation.title 'Crystal structure of Brugia malayi venom allergen-like protein-1 (BmVAL-1), a vaccine candidate for lymphatic filariasis.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.ijpara.2017.12.003 _citation.pdbx_database_id_PubMed 29501266 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Darwiche, R.' 1 ? primary 'Lugo, F.' 2 ? primary 'Drurey, C.' 3 ? primary 'Varossieau, K.' 4 ? primary 'Smant, G.' 5 ? primary 'Wilbers, R.H.P.' 6 ? primary 'Maizels, R.M.' 7 ? primary 'Schneiter, R.' 8 ? primary 'Asojo, O.A.' 9 ? # _cell.entry_id 6ANY _cell.length_a 85.790 _cell.length_b 85.790 _cell.length_c 66.670 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ANY _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Bm4233, isoform b' 23330.713 1 ? ? 'residues 17-220' ? 2 branched man 'alpha-L-fucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose' 367.349 1 ? ? ? ? 3 branched man ;beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 732.682 1 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 5 water nat water 18.015 175 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Venom allergen antigen-like protein 1,Vespid allergen antigen homolog' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;FECPGGRLTPQQRKDIVRQNNKFRSLLIHGKLKNRNGTYMPRGKNMLLLKWSCQLENSAQRWANQCVFGHSPRNQRQGIG ENVYAYWSSESVEKLRNTAGTEAGKSWWSELPKLYKQNPSNNLTDDVARQGVLHFTQMAWGKTHKIGCGIATNCDGGRTL IAICHYSPAGNMLKELIYELGEPCKTDSDCNTKKCAKKSGLCRKEL ; _entity_poly.pdbx_seq_one_letter_code_can ;FECPGGRLTPQQRKDIVRQNNKFRSLLIHGKLKNRNGTYMPRGKNMLLLKWSCQLENSAQRWANQCVFGHSPRNQRQGIG ENVYAYWSSESVEKLRNTAGTEAGKSWWSELPKLYKQNPSNNLTDDVARQGVLHFTQMAWGKTHKIGCGIATNCDGGRTL IAICHYSPAGNMLKELIYELGEPCKTDSDCNTKKCAKKSGLCRKEL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PHE n 1 2 GLU n 1 3 CYS n 1 4 PRO n 1 5 GLY n 1 6 GLY n 1 7 ARG n 1 8 LEU n 1 9 THR n 1 10 PRO n 1 11 GLN n 1 12 GLN n 1 13 ARG n 1 14 LYS n 1 15 ASP n 1 16 ILE n 1 17 VAL n 1 18 ARG n 1 19 GLN n 1 20 ASN n 1 21 ASN n 1 22 LYS n 1 23 PHE n 1 24 ARG n 1 25 SER n 1 26 LEU n 1 27 LEU n 1 28 ILE n 1 29 HIS n 1 30 GLY n 1 31 LYS n 1 32 LEU n 1 33 LYS n 1 34 ASN n 1 35 ARG n 1 36 ASN n 1 37 GLY n 1 38 THR n 1 39 TYR n 1 40 MET n 1 41 PRO n 1 42 ARG n 1 43 GLY n 1 44 LYS n 1 45 ASN n 1 46 MET n 1 47 LEU n 1 48 LEU n 1 49 LEU n 1 50 LYS n 1 51 TRP n 1 52 SER n 1 53 CYS n 1 54 GLN n 1 55 LEU n 1 56 GLU n 1 57 ASN n 1 58 SER n 1 59 ALA n 1 60 GLN n 1 61 ARG n 1 62 TRP n 1 63 ALA n 1 64 ASN n 1 65 GLN n 1 66 CYS n 1 67 VAL n 1 68 PHE n 1 69 GLY n 1 70 HIS n 1 71 SER n 1 72 PRO n 1 73 ARG n 1 74 ASN n 1 75 GLN n 1 76 ARG n 1 77 GLN n 1 78 GLY n 1 79 ILE n 1 80 GLY n 1 81 GLU n 1 82 ASN n 1 83 VAL n 1 84 TYR n 1 85 ALA n 1 86 TYR n 1 87 TRP n 1 88 SER n 1 89 SER n 1 90 GLU n 1 91 SER n 1 92 VAL n 1 93 GLU n 1 94 LYS n 1 95 LEU n 1 96 ARG n 1 97 ASN n 1 98 THR n 1 99 ALA n 1 100 GLY n 1 101 THR n 1 102 GLU n 1 103 ALA n 1 104 GLY n 1 105 LYS n 1 106 SER n 1 107 TRP n 1 108 TRP n 1 109 SER n 1 110 GLU n 1 111 LEU n 1 112 PRO n 1 113 LYS n 1 114 LEU n 1 115 TYR n 1 116 LYS n 1 117 GLN n 1 118 ASN n 1 119 PRO n 1 120 SER n 1 121 ASN n 1 122 ASN n 1 123 LEU n 1 124 THR n 1 125 ASP n 1 126 ASP n 1 127 VAL n 1 128 ALA n 1 129 ARG n 1 130 GLN n 1 131 GLY n 1 132 VAL n 1 133 LEU n 1 134 HIS n 1 135 PHE n 1 136 THR n 1 137 GLN n 1 138 MET n 1 139 ALA n 1 140 TRP n 1 141 GLY n 1 142 LYS n 1 143 THR n 1 144 HIS n 1 145 LYS n 1 146 ILE n 1 147 GLY n 1 148 CYS n 1 149 GLY n 1 150 ILE n 1 151 ALA n 1 152 THR n 1 153 ASN n 1 154 CYS n 1 155 ASP n 1 156 GLY n 1 157 GLY n 1 158 ARG n 1 159 THR n 1 160 LEU n 1 161 ILE n 1 162 ALA n 1 163 ILE n 1 164 CYS n 1 165 HIS n 1 166 TYR n 1 167 SER n 1 168 PRO n 1 169 ALA n 1 170 GLY n 1 171 ASN n 1 172 MET n 1 173 LEU n 1 174 LYS n 1 175 GLU n 1 176 LEU n 1 177 ILE n 1 178 TYR n 1 179 GLU n 1 180 LEU n 1 181 GLY n 1 182 GLU n 1 183 PRO n 1 184 CYS n 1 185 LYS n 1 186 THR n 1 187 ASP n 1 188 SER n 1 189 ASP n 1 190 CYS n 1 191 ASN n 1 192 THR n 1 193 LYS n 1 194 LYS n 1 195 CYS n 1 196 ALA n 1 197 LYS n 1 198 LYS n 1 199 SER n 1 200 GLY n 1 201 LEU n 1 202 CYS n 1 203 ARG n 1 204 LYS n 1 205 GLU n 1 206 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 206 _entity_src_gen.gene_src_common_name 'Filarial nematode worm' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Bm4233, BM_Bm4233' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Brugia malayi' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6279 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Nicotiana benthamiana' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4100 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O44932_BRUMA _struct_ref.pdbx_db_accession O44932 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;FECPGGRLTPQQRKDIVRQNNKFRSLLIHGKLKNRNGTYMPRGKNMLLLKWSCQLENSAQRWANQCVFGHSPRNQRQGIG ENVYAYWSSESVEKLRNTAGTEAGKSWWSELPKLYKQNPSNNLTDDVARQGVLHFTQMAWGKTHKIGCGIATNCDGGRTL IAICHYSPAGNMLKELIYELGEPCKTDSDCNTKKCAKKSGLCRK ; _struct_ref.pdbx_align_begin 17 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6ANY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 204 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O44932 _struct_ref_seq.db_align_beg 17 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 220 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 17 _struct_ref_seq.pdbx_auth_seq_align_end 220 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6ANY GLU A 205 ? UNP O44932 ? ? 'expression tag' 221 1 1 6ANY LEU A 206 ? UNP O44932 ? ? 'expression tag' 222 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6ANY _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.63 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 53.21 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'PEGS 2 #67' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.diffrn_id 1 _diffrn_detector.type RIGAKU _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-08-17 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU FR-E+ SUPERBRIGHT' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6ANY _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.25 _reflns.d_resolution_low 60.66 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all 22409 _reflns.number_obs 11799 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 96.4 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.1 _reflns.pdbx_Rmerge_I_obs 0.03196 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.0452 _reflns.pdbx_Rpim_I_all 0.03196 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high . _reflns_shell.d_res_low ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs 1735 _reflns_shell.number_possible ? _reflns_shell.number_unique_all 997 _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.1561 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.2207 _reflns_shell.pdbx_Rpim_I_all 0.1561 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.927 _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 6ANY _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 10814 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 44.87 _refine.ls_d_res_high 2.25 _refine.ls_percent_reflns_obs 95.82 _refine.ls_R_factor_obs 0.18316 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18025 _refine.ls_R_factor_R_free 0.21430 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 8.3 _refine.ls_number_reflns_R_free 977 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.941 _refine.correlation_coeff_Fo_to_Fc_free 0.911 _refine.B_iso_mean 20.949 _refine.aniso_B[1][1] -0.09 _refine.aniso_B[2][2] -0.09 _refine.aniso_B[3][3] 0.18 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 1u53 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.067 _refine.pdbx_overall_ESU_R_Free 0.044 _refine.overall_SU_ML 0.090 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 3.437 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 1630 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 78 _refine_hist.number_atoms_solvent 175 _refine_hist.number_atoms_total 1883 _refine_hist.d_res_high 2.25 _refine_hist.d_res_low 44.87 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.020 0.019 ? 1741 'X-RAY DIFFRACTION' ? r_bond_other_d 0.003 0.020 ? 1574 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.787 1.989 ? 2354 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.106 3.000 ? 3682 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.414 5.000 ? 205 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.921 23.974 ? 78 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 18.274 15.000 ? 308 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.673 15.000 ? 13 'X-RAY DIFFRACTION' ? r_chiral_restr 0.113 0.200 ? 255 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.009 0.020 ? 1871 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 343 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.647 1.814 ? 823 'X-RAY DIFFRACTION' ? r_mcbond_other 1.638 1.812 ? 822 'X-RAY DIFFRACTION' ? r_mcangle_it 2.397 2.714 ? 1027 'X-RAY DIFFRACTION' ? r_mcangle_other 2.399 2.716 ? 1028 'X-RAY DIFFRACTION' ? r_scbond_it 2.739 2.298 ? 918 'X-RAY DIFFRACTION' ? r_scbond_other 2.737 2.292 ? 914 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other 4.204 3.301 ? 1322 'X-RAY DIFFRACTION' ? r_long_range_B_refined 5.397 23.028 ? 2041 'X-RAY DIFFRACTION' ? r_long_range_B_other 5.298 22.714 ? 1998 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.250 _refine_ls_shell.d_res_low 2.308 _refine_ls_shell.number_reflns_R_work 687 _refine_ls_shell.R_factor_R_work 0.205 _refine_ls_shell.percent_reflns_obs 83.41 _refine_ls_shell.R_factor_R_free 0.251 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 62 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 6ANY _struct.title 'Structure of BmVAL-1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6ANY _struct_keywords.text ;Venom allergen-like, VAL, Ancylostoma secreted protein, ASP, sperm coating protein, SCP, TAPs, testis specific proteins, Tpx, antigen 5, Ag5, pathogenesis related-1, PR-1, Sc7, CAP, cysteine-rich secretory protein, CRISP, venom antigen 5, Excretory-secretory products, sterol binding, LIPID TRANSPORT ; _struct_keywords.pdbx_keywords 'LIPID TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.details 'Monomer as determined by native gel electrophoresis' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 9 ? HIS A 29 ? THR A 25 HIS A 45 1 ? 21 HELX_P HELX_P2 AA2 SER A 52 ? ASN A 64 ? SER A 68 ASN A 80 1 ? 13 HELX_P HELX_P3 AA3 PRO A 72 ? ARG A 76 ? PRO A 88 ARG A 92 5 ? 5 HELX_P HELX_P4 AA4 VAL A 92 ? ASN A 97 ? VAL A 108 ASN A 113 5 ? 6 HELX_P HELX_P5 AA5 THR A 98 ? SER A 109 ? THR A 114 SER A 125 1 ? 12 HELX_P HELX_P6 AA6 SER A 109 ? TYR A 115 ? SER A 125 TYR A 131 1 ? 7 HELX_P HELX_P7 AA7 THR A 124 ? ARG A 129 ? THR A 140 ARG A 145 1 ? 6 HELX_P HELX_P8 AA8 VAL A 132 ? ALA A 139 ? VAL A 148 ALA A 155 1 ? 8 HELX_P HELX_P9 AA9 CYS A 154 ? ARG A 158 ? CYS A 170 ARG A 174 1 ? 5 HELX_P HELX_P10 AB1 THR A 186 ? CYS A 190 ? THR A 202 CYS A 206 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 53 SG ? ? A CYS 19 A CYS 69 1_555 ? ? ? ? ? ? ? 2.006 ? ? disulf2 disulf ? ? A CYS 66 SG ? ? ? 1_555 A CYS 154 SG ? ? A CYS 82 A CYS 170 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf3 disulf ? ? A CYS 148 SG ? ? ? 1_555 A CYS 164 SG ? ? A CYS 164 A CYS 180 1_555 ? ? ? ? ? ? ? 1.973 ? ? disulf4 disulf ? ? A CYS 184 SG ? ? ? 1_555 A CYS 195 SG ? ? A CYS 200 A CYS 211 1_555 ? ? ? ? ? ? ? 2.103 ? ? disulf5 disulf ? ? A CYS 190 SG ? ? ? 1_555 A CYS 202 SG ? ? A CYS 206 A CYS 218 1_555 ? ? ? ? ? ? ? 2.245 ? ? covale1 covale one ? A ASN 36 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 52 B NAG 1 1_555 ? ? ? ? ? ? ? 1.523 ? N-Glycosylation covale2 covale one ? A ASN 122 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 138 C NAG 1 1_555 ? ? ? ? ? ? ? 1.484 ? N-Glycosylation covale3 covale both ? B NAG . O3 ? ? ? 1_555 B FUC . C1 ? ? B NAG 1 B FUC 2 1_555 ? ? ? ? ? ? ? 1.439 ? ? covale4 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.443 ? ? covale5 covale both ? C NAG . O3 ? ? ? 1_555 C FUC . C1 ? ? C NAG 1 C FUC 4 1_555 ? ? ? ? ? ? ? 1.438 ? ? covale6 covale both ? C NAG . O4 ? ? ? 1_555 C BMA . C1 ? ? C NAG 2 C BMA 3 1_555 ? ? ? ? ? ? ? 1.443 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 167 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 183 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 168 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 184 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.00 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 4 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLY A 43 ? LYS A 44 ? GLY A 59 LYS A 60 AA1 2 GLU A 179 ? LEU A 180 ? GLU A 195 LEU A 196 AA2 1 LYS A 50 ? TRP A 51 ? LYS A 66 TRP A 67 AA2 2 LYS A 145 ? ASN A 153 ? LYS A 161 ASN A 169 AA2 3 THR A 159 ? SER A 167 ? THR A 175 SER A 183 AA2 4 GLY A 80 ? TRP A 87 ? GLY A 96 TRP A 103 AA3 1 CYS A 195 ? ALA A 196 ? CYS A 211 ALA A 212 AA3 2 LEU A 201 ? CYS A 202 ? LEU A 217 CYS A 218 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LYS A 44 ? N LYS A 60 O GLU A 179 ? O GLU A 195 AA2 1 2 N LYS A 50 ? N LYS A 66 O ILE A 146 ? O ILE A 162 AA2 2 3 N GLY A 147 ? N GLY A 163 O HIS A 165 ? O HIS A 181 AA2 3 4 O TYR A 166 ? O TYR A 182 N GLY A 80 ? N GLY A 96 AA3 1 2 N ALA A 196 ? N ALA A 212 O LEU A 201 ? O LEU A 217 # _atom_sites.entry_id 6ANY _atom_sites.fract_transf_matrix[1][1] 0.011656 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011656 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014999 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PHE 1 17 17 PHE PHE A . n A 1 2 GLU 2 18 18 GLU GLU A . n A 1 3 CYS 3 19 19 CYS CYS A . n A 1 4 PRO 4 20 20 PRO PRO A . n A 1 5 GLY 5 21 21 GLY GLY A . n A 1 6 GLY 6 22 22 GLY GLY A . n A 1 7 ARG 7 23 23 ARG ARG A . n A 1 8 LEU 8 24 24 LEU LEU A . n A 1 9 THR 9 25 25 THR THR A . n A 1 10 PRO 10 26 26 PRO PRO A . n A 1 11 GLN 11 27 27 GLN GLN A . n A 1 12 GLN 12 28 28 GLN GLN A . n A 1 13 ARG 13 29 29 ARG ARG A . n A 1 14 LYS 14 30 30 LYS LYS A . n A 1 15 ASP 15 31 31 ASP ASP A . n A 1 16 ILE 16 32 32 ILE ILE A . n A 1 17 VAL 17 33 33 VAL VAL A . n A 1 18 ARG 18 34 34 ARG ARG A . n A 1 19 GLN 19 35 35 GLN GLN A . n A 1 20 ASN 20 36 36 ASN ASN A . n A 1 21 ASN 21 37 37 ASN ASN A . n A 1 22 LYS 22 38 38 LYS LYS A . n A 1 23 PHE 23 39 39 PHE PHE A . n A 1 24 ARG 24 40 40 ARG ARG A . n A 1 25 SER 25 41 41 SER SER A . n A 1 26 LEU 26 42 42 LEU LEU A . n A 1 27 LEU 27 43 43 LEU LEU A . n A 1 28 ILE 28 44 44 ILE ILE A . n A 1 29 HIS 29 45 45 HIS HIS A . n A 1 30 GLY 30 46 46 GLY GLY A . n A 1 31 LYS 31 47 47 LYS LYS A . n A 1 32 LEU 32 48 48 LEU LEU A . n A 1 33 LYS 33 49 49 LYS LYS A . n A 1 34 ASN 34 50 50 ASN ASN A . n A 1 35 ARG 35 51 51 ARG ARG A . n A 1 36 ASN 36 52 52 ASN ASN A . n A 1 37 GLY 37 53 53 GLY GLY A . n A 1 38 THR 38 54 54 THR THR A . n A 1 39 TYR 39 55 55 TYR TYR A . n A 1 40 MET 40 56 56 MET MET A . n A 1 41 PRO 41 57 57 PRO PRO A . n A 1 42 ARG 42 58 58 ARG ARG A . n A 1 43 GLY 43 59 59 GLY GLY A . n A 1 44 LYS 44 60 60 LYS LYS A . n A 1 45 ASN 45 61 61 ASN ASN A . n A 1 46 MET 46 62 62 MET MET A . n A 1 47 LEU 47 63 63 LEU LEU A . n A 1 48 LEU 48 64 64 LEU LEU A . n A 1 49 LEU 49 65 65 LEU LEU A . n A 1 50 LYS 50 66 66 LYS LYS A . n A 1 51 TRP 51 67 67 TRP TRP A . n A 1 52 SER 52 68 68 SER SER A . n A 1 53 CYS 53 69 69 CYS CYS A . n A 1 54 GLN 54 70 70 GLN GLN A . n A 1 55 LEU 55 71 71 LEU LEU A . n A 1 56 GLU 56 72 72 GLU GLU A . n A 1 57 ASN 57 73 73 ASN ASN A . n A 1 58 SER 58 74 74 SER SER A . n A 1 59 ALA 59 75 75 ALA ALA A . n A 1 60 GLN 60 76 76 GLN GLN A . n A 1 61 ARG 61 77 77 ARG ARG A . n A 1 62 TRP 62 78 78 TRP TRP A . n A 1 63 ALA 63 79 79 ALA ALA A . n A 1 64 ASN 64 80 80 ASN ASN A . n A 1 65 GLN 65 81 81 GLN GLN A . n A 1 66 CYS 66 82 82 CYS CYS A . n A 1 67 VAL 67 83 83 VAL VAL A . n A 1 68 PHE 68 84 84 PHE PHE A . n A 1 69 GLY 69 85 85 GLY GLY A . n A 1 70 HIS 70 86 86 HIS HIS A . n A 1 71 SER 71 87 87 SER SER A . n A 1 72 PRO 72 88 88 PRO PRO A . n A 1 73 ARG 73 89 89 ARG ARG A . n A 1 74 ASN 74 90 90 ASN ASN A . n A 1 75 GLN 75 91 91 GLN GLN A . n A 1 76 ARG 76 92 92 ARG ARG A . n A 1 77 GLN 77 93 93 GLN GLN A . n A 1 78 GLY 78 94 94 GLY GLY A . n A 1 79 ILE 79 95 95 ILE ILE A . n A 1 80 GLY 80 96 96 GLY GLY A . n A 1 81 GLU 81 97 97 GLU GLU A . n A 1 82 ASN 82 98 98 ASN ASN A . n A 1 83 VAL 83 99 99 VAL VAL A . n A 1 84 TYR 84 100 100 TYR TYR A . n A 1 85 ALA 85 101 101 ALA ALA A . n A 1 86 TYR 86 102 102 TYR TYR A . n A 1 87 TRP 87 103 103 TRP TRP A . n A 1 88 SER 88 104 104 SER SER A . n A 1 89 SER 89 105 105 SER SER A . n A 1 90 GLU 90 106 106 GLU GLU A . n A 1 91 SER 91 107 107 SER SER A . n A 1 92 VAL 92 108 108 VAL VAL A . n A 1 93 GLU 93 109 109 GLU GLU A . n A 1 94 LYS 94 110 110 LYS LYS A . n A 1 95 LEU 95 111 111 LEU LEU A . n A 1 96 ARG 96 112 112 ARG ARG A . n A 1 97 ASN 97 113 113 ASN ASN A . n A 1 98 THR 98 114 114 THR THR A . n A 1 99 ALA 99 115 115 ALA ALA A . n A 1 100 GLY 100 116 116 GLY GLY A . n A 1 101 THR 101 117 117 THR THR A . n A 1 102 GLU 102 118 118 GLU GLU A . n A 1 103 ALA 103 119 119 ALA ALA A . n A 1 104 GLY 104 120 120 GLY GLY A . n A 1 105 LYS 105 121 121 LYS LYS A . n A 1 106 SER 106 122 122 SER SER A . n A 1 107 TRP 107 123 123 TRP TRP A . n A 1 108 TRP 108 124 124 TRP TRP A . n A 1 109 SER 109 125 125 SER SER A . n A 1 110 GLU 110 126 126 GLU GLU A . n A 1 111 LEU 111 127 127 LEU LEU A . n A 1 112 PRO 112 128 128 PRO PRO A . n A 1 113 LYS 113 129 129 LYS LYS A . n A 1 114 LEU 114 130 130 LEU LEU A . n A 1 115 TYR 115 131 131 TYR TYR A . n A 1 116 LYS 116 132 132 LYS LYS A . n A 1 117 GLN 117 133 133 GLN GLN A . n A 1 118 ASN 118 134 134 ASN ASN A . n A 1 119 PRO 119 135 135 PRO PRO A . n A 1 120 SER 120 136 136 SER SER A . n A 1 121 ASN 121 137 137 ASN ASN A . n A 1 122 ASN 122 138 138 ASN ASN A . n A 1 123 LEU 123 139 139 LEU LEU A . n A 1 124 THR 124 140 140 THR THR A . n A 1 125 ASP 125 141 141 ASP ASP A . n A 1 126 ASP 126 142 142 ASP ASP A . n A 1 127 VAL 127 143 143 VAL VAL A . n A 1 128 ALA 128 144 144 ALA ALA A . n A 1 129 ARG 129 145 145 ARG ARG A . n A 1 130 GLN 130 146 146 GLN GLN A . n A 1 131 GLY 131 147 147 GLY GLY A . n A 1 132 VAL 132 148 148 VAL VAL A . n A 1 133 LEU 133 149 149 LEU LEU A . n A 1 134 HIS 134 150 150 HIS HIS A . n A 1 135 PHE 135 151 151 PHE PHE A . n A 1 136 THR 136 152 152 THR THR A . n A 1 137 GLN 137 153 153 GLN GLN A . n A 1 138 MET 138 154 154 MET MET A . n A 1 139 ALA 139 155 155 ALA ALA A . n A 1 140 TRP 140 156 156 TRP TRP A . n A 1 141 GLY 141 157 157 GLY GLY A . n A 1 142 LYS 142 158 158 LYS LYS A . n A 1 143 THR 143 159 159 THR THR A . n A 1 144 HIS 144 160 160 HIS HIS A . n A 1 145 LYS 145 161 161 LYS LYS A . n A 1 146 ILE 146 162 162 ILE ILE A . n A 1 147 GLY 147 163 163 GLY GLY A . n A 1 148 CYS 148 164 164 CYS CYS A . n A 1 149 GLY 149 165 165 GLY GLY A . n A 1 150 ILE 150 166 166 ILE ILE A . n A 1 151 ALA 151 167 167 ALA ALA A . n A 1 152 THR 152 168 168 THR THR A . n A 1 153 ASN 153 169 169 ASN ASN A . n A 1 154 CYS 154 170 170 CYS CYS A . n A 1 155 ASP 155 171 171 ASP ASP A . n A 1 156 GLY 156 172 172 GLY GLY A . n A 1 157 GLY 157 173 173 GLY GLY A . n A 1 158 ARG 158 174 174 ARG ARG A . n A 1 159 THR 159 175 175 THR THR A . n A 1 160 LEU 160 176 176 LEU LEU A . n A 1 161 ILE 161 177 177 ILE ILE A . n A 1 162 ALA 162 178 178 ALA ALA A . n A 1 163 ILE 163 179 179 ILE ILE A . n A 1 164 CYS 164 180 180 CYS CYS A . n A 1 165 HIS 165 181 181 HIS HIS A . n A 1 166 TYR 166 182 182 TYR TYR A . n A 1 167 SER 167 183 183 SER SER A . n A 1 168 PRO 168 184 184 PRO PRO A . n A 1 169 ALA 169 185 185 ALA ALA A . n A 1 170 GLY 170 186 186 GLY GLY A . n A 1 171 ASN 171 187 187 ASN ASN A . n A 1 172 MET 172 188 188 MET MET A . n A 1 173 LEU 173 189 189 LEU LEU A . n A 1 174 LYS 174 190 190 LYS LYS A . n A 1 175 GLU 175 191 191 GLU GLU A . n A 1 176 LEU 176 192 192 LEU LEU A . n A 1 177 ILE 177 193 193 ILE ILE A . n A 1 178 TYR 178 194 194 TYR TYR A . n A 1 179 GLU 179 195 195 GLU GLU A . n A 1 180 LEU 180 196 196 LEU LEU A . n A 1 181 GLY 181 197 197 GLY GLY A . n A 1 182 GLU 182 198 198 GLU GLU A . n A 1 183 PRO 183 199 199 PRO PRO A . n A 1 184 CYS 184 200 200 CYS CYS A . n A 1 185 LYS 185 201 201 LYS LYS A . n A 1 186 THR 186 202 202 THR THR A . n A 1 187 ASP 187 203 203 ASP ASP A . n A 1 188 SER 188 204 204 SER SER A . n A 1 189 ASP 189 205 205 ASP ASP A . n A 1 190 CYS 190 206 206 CYS CYS A . n A 1 191 ASN 191 207 207 ASN ASN A . n A 1 192 THR 192 208 208 THR THR A . n A 1 193 LYS 193 209 209 LYS LYS A . n A 1 194 LYS 194 210 210 LYS LYS A . n A 1 195 CYS 195 211 211 CYS CYS A . n A 1 196 ALA 196 212 212 ALA ALA A . n A 1 197 LYS 197 213 213 LYS LYS A . n A 1 198 LYS 198 214 214 LYS LYS A . n A 1 199 SER 199 215 215 SER SER A . n A 1 200 GLY 200 216 216 GLY GLY A . n A 1 201 LEU 201 217 217 LEU LEU A . n A 1 202 CYS 202 218 218 CYS CYS A . n A 1 203 ARG 203 219 219 ARG ARG A . n A 1 204 LYS 204 220 220 LYS LYS A . n A 1 205 GLU 205 221 221 GLU GLU A . n A 1 206 LEU 206 222 222 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 SO4 1 307 1 SO4 SO4 A . E 5 HOH 1 401 189 HOH HOH A . E 5 HOH 2 402 132 HOH HOH A . E 5 HOH 3 403 61 HOH HOH A . E 5 HOH 4 404 184 HOH HOH A . E 5 HOH 5 405 101 HOH HOH A . E 5 HOH 6 406 133 HOH HOH A . E 5 HOH 7 407 146 HOH HOH A . E 5 HOH 8 408 18 HOH HOH A . E 5 HOH 9 409 60 HOH HOH A . E 5 HOH 10 410 9 HOH HOH A . E 5 HOH 11 411 157 HOH HOH A . E 5 HOH 12 412 186 HOH HOH A . E 5 HOH 13 413 71 HOH HOH A . E 5 HOH 14 414 11 HOH HOH A . E 5 HOH 15 415 20 HOH HOH A . E 5 HOH 16 416 15 HOH HOH A . E 5 HOH 17 417 125 HOH HOH A . E 5 HOH 18 418 36 HOH HOH A . E 5 HOH 19 419 188 HOH HOH A . E 5 HOH 20 420 4 HOH HOH A . E 5 HOH 21 421 65 HOH HOH A . E 5 HOH 22 422 24 HOH HOH A . E 5 HOH 23 423 109 HOH HOH A . E 5 HOH 24 424 35 HOH HOH A . E 5 HOH 25 425 66 HOH HOH A . E 5 HOH 26 426 73 HOH HOH A . E 5 HOH 27 427 139 HOH HOH A . E 5 HOH 28 428 76 HOH HOH A . E 5 HOH 29 429 41 HOH HOH A . E 5 HOH 30 430 10 HOH HOH A . E 5 HOH 31 431 118 HOH HOH A . E 5 HOH 32 432 2 HOH HOH A . E 5 HOH 33 433 8 HOH HOH A . E 5 HOH 34 434 113 HOH HOH A . E 5 HOH 35 435 104 HOH HOH A . E 5 HOH 36 436 111 HOH HOH A . E 5 HOH 37 437 117 HOH HOH A . E 5 HOH 38 438 149 HOH HOH A . E 5 HOH 39 439 6 HOH HOH A . E 5 HOH 40 440 78 HOH HOH A . E 5 HOH 41 441 31 HOH HOH A . E 5 HOH 42 442 144 HOH HOH A . E 5 HOH 43 443 100 HOH HOH A . E 5 HOH 44 444 3 HOH HOH A . E 5 HOH 45 445 12 HOH HOH A . E 5 HOH 46 446 21 HOH HOH A . E 5 HOH 47 447 129 HOH HOH A . E 5 HOH 48 448 48 HOH HOH A . E 5 HOH 49 449 164 HOH HOH A . E 5 HOH 50 450 46 HOH HOH A . E 5 HOH 51 451 23 HOH HOH A . E 5 HOH 52 452 178 HOH HOH A . E 5 HOH 53 453 175 HOH HOH A . E 5 HOH 54 454 72 HOH HOH A . E 5 HOH 55 455 114 HOH HOH A . E 5 HOH 56 456 1 HOH HOH A . E 5 HOH 57 457 84 HOH HOH A . E 5 HOH 58 458 160 HOH HOH A . E 5 HOH 59 459 85 HOH HOH A . E 5 HOH 60 460 5 HOH HOH A . E 5 HOH 61 461 112 HOH HOH A . E 5 HOH 62 462 172 HOH HOH A . E 5 HOH 63 463 83 HOH HOH A . E 5 HOH 64 464 204 HOH HOH A . E 5 HOH 65 465 57 HOH HOH A . E 5 HOH 66 466 33 HOH HOH A . E 5 HOH 67 467 122 HOH HOH A . E 5 HOH 68 468 40 HOH HOH A . E 5 HOH 69 469 54 HOH HOH A . E 5 HOH 70 470 80 HOH HOH A . E 5 HOH 71 471 141 HOH HOH A . E 5 HOH 72 472 74 HOH HOH A . E 5 HOH 73 473 37 HOH HOH A . E 5 HOH 74 474 38 HOH HOH A . E 5 HOH 75 475 63 HOH HOH A . E 5 HOH 76 476 195 HOH HOH A . E 5 HOH 77 477 105 HOH HOH A . E 5 HOH 78 478 145 HOH HOH A . E 5 HOH 79 479 135 HOH HOH A . E 5 HOH 80 480 92 HOH HOH A . E 5 HOH 81 481 19 HOH HOH A . E 5 HOH 82 482 70 HOH HOH A . E 5 HOH 83 483 124 HOH HOH A . E 5 HOH 84 484 28 HOH HOH A . E 5 HOH 85 485 123 HOH HOH A . E 5 HOH 86 486 39 HOH HOH A . E 5 HOH 87 487 16 HOH HOH A . E 5 HOH 88 488 51 HOH HOH A . E 5 HOH 89 489 45 HOH HOH A . E 5 HOH 90 490 126 HOH HOH A . E 5 HOH 91 491 120 HOH HOH A . E 5 HOH 92 492 187 HOH HOH A . E 5 HOH 93 493 7 HOH HOH A . E 5 HOH 94 494 199 HOH HOH A . E 5 HOH 95 495 102 HOH HOH A . E 5 HOH 96 496 69 HOH HOH A . E 5 HOH 97 497 95 HOH HOH A . E 5 HOH 98 498 59 HOH HOH A . E 5 HOH 99 499 49 HOH HOH A . E 5 HOH 100 500 34 HOH HOH A . E 5 HOH 101 501 91 HOH HOH A . E 5 HOH 102 502 89 HOH HOH A . E 5 HOH 103 503 25 HOH HOH A . E 5 HOH 104 504 29 HOH HOH A . E 5 HOH 105 505 68 HOH HOH A . E 5 HOH 106 506 88 HOH HOH A . E 5 HOH 107 507 121 HOH HOH A . E 5 HOH 108 508 56 HOH HOH A . E 5 HOH 109 509 152 HOH HOH A . E 5 HOH 110 510 202 HOH HOH A . E 5 HOH 111 511 82 HOH HOH A . E 5 HOH 112 512 86 HOH HOH A . E 5 HOH 113 513 55 HOH HOH A . E 5 HOH 114 514 176 HOH HOH A . E 5 HOH 115 515 154 HOH HOH A . E 5 HOH 116 516 75 HOH HOH A . E 5 HOH 117 517 52 HOH HOH A . E 5 HOH 118 518 50 HOH HOH A . E 5 HOH 119 519 77 HOH HOH A . E 5 HOH 120 520 27 HOH HOH A . E 5 HOH 121 521 169 HOH HOH A . E 5 HOH 122 522 32 HOH HOH A . E 5 HOH 123 523 81 HOH HOH A . E 5 HOH 124 524 14 HOH HOH A . E 5 HOH 125 525 30 HOH HOH A . E 5 HOH 126 526 119 HOH HOH A . E 5 HOH 127 527 107 HOH HOH A . E 5 HOH 128 528 47 HOH HOH A . E 5 HOH 129 529 205 HOH HOH A . E 5 HOH 130 530 151 HOH HOH A . E 5 HOH 131 531 183 HOH HOH A . E 5 HOH 132 532 140 HOH HOH A . E 5 HOH 133 533 150 HOH HOH A . E 5 HOH 134 534 17 HOH HOH A . E 5 HOH 135 535 58 HOH HOH A . E 5 HOH 136 536 64 HOH HOH A . E 5 HOH 137 537 26 HOH HOH A . E 5 HOH 138 538 155 HOH HOH A . E 5 HOH 139 539 108 HOH HOH A . E 5 HOH 140 540 44 HOH HOH A . E 5 HOH 141 541 156 HOH HOH A . E 5 HOH 142 542 90 HOH HOH A . E 5 HOH 143 543 159 HOH HOH A . E 5 HOH 144 544 193 HOH HOH A . E 5 HOH 145 545 128 HOH HOH A . E 5 HOH 146 546 62 HOH HOH A . E 5 HOH 147 547 115 HOH HOH A . E 5 HOH 148 548 99 HOH HOH A . E 5 HOH 149 549 22 HOH HOH A . E 5 HOH 150 550 131 HOH HOH A . E 5 HOH 151 551 43 HOH HOH A . E 5 HOH 152 552 96 HOH HOH A . E 5 HOH 153 553 53 HOH HOH A . E 5 HOH 154 554 181 HOH HOH A . E 5 HOH 155 555 163 HOH HOH A . E 5 HOH 156 556 87 HOH HOH A . E 5 HOH 157 557 180 HOH HOH A . E 5 HOH 158 558 67 HOH HOH A . E 5 HOH 159 559 194 HOH HOH A . E 5 HOH 160 560 167 HOH HOH A . E 5 HOH 161 561 185 HOH HOH A . E 5 HOH 162 562 116 HOH HOH A . E 5 HOH 163 563 98 HOH HOH A . E 5 HOH 164 564 94 HOH HOH A . E 5 HOH 165 565 165 HOH HOH A . E 5 HOH 166 566 143 HOH HOH A . E 5 HOH 167 567 196 HOH HOH A . E 5 HOH 168 568 13 HOH HOH A . E 5 HOH 169 569 79 HOH HOH A . E 5 HOH 170 570 93 HOH HOH A . E 5 HOH 171 571 137 HOH HOH A . E 5 HOH 172 572 42 HOH HOH A . E 5 HOH 173 573 182 HOH HOH A . E 5 HOH 174 574 173 HOH HOH A . E 5 HOH 175 575 190 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-03-28 2 'Structure model' 1 1 2018-04-25 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2023-10-04 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Atomic model' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Structure summary' 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Database references' 9 4 'Structure model' 'Derived calculations' 10 4 'Structure model' 'Refinement description' 11 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' atom_site 3 3 'Structure model' chem_comp 4 3 'Structure model' entity 5 3 'Structure model' pdbx_branch_scheme 6 3 'Structure model' pdbx_chem_comp_identifier 7 3 'Structure model' pdbx_entity_branch 8 3 'Structure model' pdbx_entity_branch_descriptor 9 3 'Structure model' pdbx_entity_branch_link 10 3 'Structure model' pdbx_entity_branch_list 11 3 'Structure model' pdbx_entity_nonpoly 12 3 'Structure model' pdbx_nonpoly_scheme 13 3 'Structure model' pdbx_struct_assembly_gen 14 3 'Structure model' struct_asym 15 3 'Structure model' struct_conn 16 3 'Structure model' struct_site 17 3 'Structure model' struct_site_gen 18 4 'Structure model' chem_comp 19 4 'Structure model' chem_comp_atom 20 4 'Structure model' chem_comp_bond 21 4 'Structure model' database_2 22 4 'Structure model' pdbx_initial_refinement_model 23 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 3 'Structure model' '_atom_site.auth_asym_id' 5 3 'Structure model' '_atom_site.auth_seq_id' 6 3 'Structure model' '_atom_site.label_asym_id' 7 3 'Structure model' '_atom_site.label_entity_id' 8 3 'Structure model' '_chem_comp.name' 9 3 'Structure model' '_chem_comp.type' 10 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 11 3 'Structure model' '_struct_conn.pdbx_dist_value' 12 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 13 3 'Structure model' '_struct_conn.pdbx_role' 14 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 15 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 16 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 17 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 18 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 19 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 20 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 21 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 22 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 23 4 'Structure model' '_chem_comp.pdbx_synonyms' 24 4 'Structure model' '_database_2.pdbx_DOI' 25 4 'Structure model' '_database_2.pdbx_database_accession' 26 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0158 1 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? CrystalClear ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 ND2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASN _pdbx_validate_close_contact.auth_seq_id_1 90 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 401 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.13 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 145 ? ? CZ A ARG 145 ? ? NH2 A ARG 145 ? ? 116.88 120.30 -3.42 0.50 N 2 1 NE A ARG 174 ? ? CZ A ARG 174 ? ? NH1 A ARG 174 ? ? 123.58 120.30 3.28 0.50 N 3 1 CB A LEU 222 ? ? CG A LEU 222 ? ? CD1 A LEU 222 ? ? 100.40 111.00 -10.60 1.70 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 FUC C1 C N R 112 FUC C2 C N S 113 FUC C3 C N R 114 FUC C4 C N S 115 FUC C5 C N S 116 FUC C6 C N N 117 FUC O1 O N N 118 FUC O2 O N N 119 FUC O3 O N N 120 FUC O4 O N N 121 FUC O5 O N N 122 FUC H1 H N N 123 FUC H2 H N N 124 FUC H3 H N N 125 FUC H4 H N N 126 FUC H5 H N N 127 FUC H61 H N N 128 FUC H62 H N N 129 FUC H63 H N N 130 FUC HO1 H N N 131 FUC HO2 H N N 132 FUC HO3 H N N 133 FUC HO4 H N N 134 GLN N N N N 135 GLN CA C N S 136 GLN C C N N 137 GLN O O N N 138 GLN CB C N N 139 GLN CG C N N 140 GLN CD C N N 141 GLN OE1 O N N 142 GLN NE2 N N N 143 GLN OXT O N N 144 GLN H H N N 145 GLN H2 H N N 146 GLN HA H N N 147 GLN HB2 H N N 148 GLN HB3 H N N 149 GLN HG2 H N N 150 GLN HG3 H N N 151 GLN HE21 H N N 152 GLN HE22 H N N 153 GLN HXT H N N 154 GLU N N N N 155 GLU CA C N S 156 GLU C C N N 157 GLU O O N N 158 GLU CB C N N 159 GLU CG C N N 160 GLU CD C N N 161 GLU OE1 O N N 162 GLU OE2 O N N 163 GLU OXT O N N 164 GLU H H N N 165 GLU H2 H N N 166 GLU HA H N N 167 GLU HB2 H N N 168 GLU HB3 H N N 169 GLU HG2 H N N 170 GLU HG3 H N N 171 GLU HE2 H N N 172 GLU HXT H N N 173 GLY N N N N 174 GLY CA C N N 175 GLY C C N N 176 GLY O O N N 177 GLY OXT O N N 178 GLY H H N N 179 GLY H2 H N N 180 GLY HA2 H N N 181 GLY HA3 H N N 182 GLY HXT H N N 183 HIS N N N N 184 HIS CA C N S 185 HIS C C N N 186 HIS O O N N 187 HIS CB C N N 188 HIS CG C Y N 189 HIS ND1 N Y N 190 HIS CD2 C Y N 191 HIS CE1 C Y N 192 HIS NE2 N Y N 193 HIS OXT O N N 194 HIS H H N N 195 HIS H2 H N N 196 HIS HA H N N 197 HIS HB2 H N N 198 HIS HB3 H N N 199 HIS HD1 H N N 200 HIS HD2 H N N 201 HIS HE1 H N N 202 HIS HE2 H N N 203 HIS HXT H N N 204 HOH O O N N 205 HOH H1 H N N 206 HOH H2 H N N 207 ILE N N N N 208 ILE CA C N S 209 ILE C C N N 210 ILE O O N N 211 ILE CB C N S 212 ILE CG1 C N N 213 ILE CG2 C N N 214 ILE CD1 C N N 215 ILE OXT O N N 216 ILE H H N N 217 ILE H2 H N N 218 ILE HA H N N 219 ILE HB H N N 220 ILE HG12 H N N 221 ILE HG13 H N N 222 ILE HG21 H N N 223 ILE HG22 H N N 224 ILE HG23 H N N 225 ILE HD11 H N N 226 ILE HD12 H N N 227 ILE HD13 H N N 228 ILE HXT H N N 229 LEU N N N N 230 LEU CA C N S 231 LEU C C N N 232 LEU O O N N 233 LEU CB C N N 234 LEU CG C N N 235 LEU CD1 C N N 236 LEU CD2 C N N 237 LEU OXT O N N 238 LEU H H N N 239 LEU H2 H N N 240 LEU HA H N N 241 LEU HB2 H N N 242 LEU HB3 H N N 243 LEU HG H N N 244 LEU HD11 H N N 245 LEU HD12 H N N 246 LEU HD13 H N N 247 LEU HD21 H N N 248 LEU HD22 H N N 249 LEU HD23 H N N 250 LEU HXT H N N 251 LYS N N N N 252 LYS CA C N S 253 LYS C C N N 254 LYS O O N N 255 LYS CB C N N 256 LYS CG C N N 257 LYS CD C N N 258 LYS CE C N N 259 LYS NZ N N N 260 LYS OXT O N N 261 LYS H H N N 262 LYS H2 H N N 263 LYS HA H N N 264 LYS HB2 H N N 265 LYS HB3 H N N 266 LYS HG2 H N N 267 LYS HG3 H N N 268 LYS HD2 H N N 269 LYS HD3 H N N 270 LYS HE2 H N N 271 LYS HE3 H N N 272 LYS HZ1 H N N 273 LYS HZ2 H N N 274 LYS HZ3 H N N 275 LYS HXT H N N 276 MET N N N N 277 MET CA C N S 278 MET C C N N 279 MET O O N N 280 MET CB C N N 281 MET CG C N N 282 MET SD S N N 283 MET CE C N N 284 MET OXT O N N 285 MET H H N N 286 MET H2 H N N 287 MET HA H N N 288 MET HB2 H N N 289 MET HB3 H N N 290 MET HG2 H N N 291 MET HG3 H N N 292 MET HE1 H N N 293 MET HE2 H N N 294 MET HE3 H N N 295 MET HXT H N N 296 NAG C1 C N R 297 NAG C2 C N R 298 NAG C3 C N R 299 NAG C4 C N S 300 NAG C5 C N R 301 NAG C6 C N N 302 NAG C7 C N N 303 NAG C8 C N N 304 NAG N2 N N N 305 NAG O1 O N N 306 NAG O3 O N N 307 NAG O4 O N N 308 NAG O5 O N N 309 NAG O6 O N N 310 NAG O7 O N N 311 NAG H1 H N N 312 NAG H2 H N N 313 NAG H3 H N N 314 NAG H4 H N N 315 NAG H5 H N N 316 NAG H61 H N N 317 NAG H62 H N N 318 NAG H81 H N N 319 NAG H82 H N N 320 NAG H83 H N N 321 NAG HN2 H N N 322 NAG HO1 H N N 323 NAG HO3 H N N 324 NAG HO4 H N N 325 NAG HO6 H N N 326 PHE N N N N 327 PHE CA C N S 328 PHE C C N N 329 PHE O O N N 330 PHE CB C N N 331 PHE CG C Y N 332 PHE CD1 C Y N 333 PHE CD2 C Y N 334 PHE CE1 C Y N 335 PHE CE2 C Y N 336 PHE CZ C Y N 337 PHE OXT O N N 338 PHE H H N N 339 PHE H2 H N N 340 PHE HA H N N 341 PHE HB2 H N N 342 PHE HB3 H N N 343 PHE HD1 H N N 344 PHE HD2 H N N 345 PHE HE1 H N N 346 PHE HE2 H N N 347 PHE HZ H N N 348 PHE HXT H N N 349 PRO N N N N 350 PRO CA C N S 351 PRO C C N N 352 PRO O O N N 353 PRO CB C N N 354 PRO CG C N N 355 PRO CD C N N 356 PRO OXT O N N 357 PRO H H N N 358 PRO HA H N N 359 PRO HB2 H N N 360 PRO HB3 H N N 361 PRO HG2 H N N 362 PRO HG3 H N N 363 PRO HD2 H N N 364 PRO HD3 H N N 365 PRO HXT H N N 366 SER N N N N 367 SER CA C N S 368 SER C C N N 369 SER O O N N 370 SER CB C N N 371 SER OG O N N 372 SER OXT O N N 373 SER H H N N 374 SER H2 H N N 375 SER HA H N N 376 SER HB2 H N N 377 SER HB3 H N N 378 SER HG H N N 379 SER HXT H N N 380 SO4 S S N N 381 SO4 O1 O N N 382 SO4 O2 O N N 383 SO4 O3 O N N 384 SO4 O4 O N N 385 THR N N N N 386 THR CA C N S 387 THR C C N N 388 THR O O N N 389 THR CB C N R 390 THR OG1 O N N 391 THR CG2 C N N 392 THR OXT O N N 393 THR H H N N 394 THR H2 H N N 395 THR HA H N N 396 THR HB H N N 397 THR HG1 H N N 398 THR HG21 H N N 399 THR HG22 H N N 400 THR HG23 H N N 401 THR HXT H N N 402 TRP N N N N 403 TRP CA C N S 404 TRP C C N N 405 TRP O O N N 406 TRP CB C N N 407 TRP CG C Y N 408 TRP CD1 C Y N 409 TRP CD2 C Y N 410 TRP NE1 N Y N 411 TRP CE2 C Y N 412 TRP CE3 C Y N 413 TRP CZ2 C Y N 414 TRP CZ3 C Y N 415 TRP CH2 C Y N 416 TRP OXT O N N 417 TRP H H N N 418 TRP H2 H N N 419 TRP HA H N N 420 TRP HB2 H N N 421 TRP HB3 H N N 422 TRP HD1 H N N 423 TRP HE1 H N N 424 TRP HE3 H N N 425 TRP HZ2 H N N 426 TRP HZ3 H N N 427 TRP HH2 H N N 428 TRP HXT H N N 429 TYR N N N N 430 TYR CA C N S 431 TYR C C N N 432 TYR O O N N 433 TYR CB C N N 434 TYR CG C Y N 435 TYR CD1 C Y N 436 TYR CD2 C Y N 437 TYR CE1 C Y N 438 TYR CE2 C Y N 439 TYR CZ C Y N 440 TYR OH O N N 441 TYR OXT O N N 442 TYR H H N N 443 TYR H2 H N N 444 TYR HA H N N 445 TYR HB2 H N N 446 TYR HB3 H N N 447 TYR HD1 H N N 448 TYR HD2 H N N 449 TYR HE1 H N N 450 TYR HE2 H N N 451 TYR HH H N N 452 TYR HXT H N N 453 VAL N N N N 454 VAL CA C N S 455 VAL C C N N 456 VAL O O N N 457 VAL CB C N N 458 VAL CG1 C N N 459 VAL CG2 C N N 460 VAL OXT O N N 461 VAL H H N N 462 VAL H2 H N N 463 VAL HA H N N 464 VAL HB H N N 465 VAL HG11 H N N 466 VAL HG12 H N N 467 VAL HG13 H N N 468 VAL HG21 H N N 469 VAL HG22 H N N 470 VAL HG23 H N N 471 VAL HXT H N N 472 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 FUC C1 C2 sing N N 107 FUC C1 O1 sing N N 108 FUC C1 O5 sing N N 109 FUC C1 H1 sing N N 110 FUC C2 C3 sing N N 111 FUC C2 O2 sing N N 112 FUC C2 H2 sing N N 113 FUC C3 C4 sing N N 114 FUC C3 O3 sing N N 115 FUC C3 H3 sing N N 116 FUC C4 C5 sing N N 117 FUC C4 O4 sing N N 118 FUC C4 H4 sing N N 119 FUC C5 C6 sing N N 120 FUC C5 O5 sing N N 121 FUC C5 H5 sing N N 122 FUC C6 H61 sing N N 123 FUC C6 H62 sing N N 124 FUC C6 H63 sing N N 125 FUC O1 HO1 sing N N 126 FUC O2 HO2 sing N N 127 FUC O3 HO3 sing N N 128 FUC O4 HO4 sing N N 129 GLN N CA sing N N 130 GLN N H sing N N 131 GLN N H2 sing N N 132 GLN CA C sing N N 133 GLN CA CB sing N N 134 GLN CA HA sing N N 135 GLN C O doub N N 136 GLN C OXT sing N N 137 GLN CB CG sing N N 138 GLN CB HB2 sing N N 139 GLN CB HB3 sing N N 140 GLN CG CD sing N N 141 GLN CG HG2 sing N N 142 GLN CG HG3 sing N N 143 GLN CD OE1 doub N N 144 GLN CD NE2 sing N N 145 GLN NE2 HE21 sing N N 146 GLN NE2 HE22 sing N N 147 GLN OXT HXT sing N N 148 GLU N CA sing N N 149 GLU N H sing N N 150 GLU N H2 sing N N 151 GLU CA C sing N N 152 GLU CA CB sing N N 153 GLU CA HA sing N N 154 GLU C O doub N N 155 GLU C OXT sing N N 156 GLU CB CG sing N N 157 GLU CB HB2 sing N N 158 GLU CB HB3 sing N N 159 GLU CG CD sing N N 160 GLU CG HG2 sing N N 161 GLU CG HG3 sing N N 162 GLU CD OE1 doub N N 163 GLU CD OE2 sing N N 164 GLU OE2 HE2 sing N N 165 GLU OXT HXT sing N N 166 GLY N CA sing N N 167 GLY N H sing N N 168 GLY N H2 sing N N 169 GLY CA C sing N N 170 GLY CA HA2 sing N N 171 GLY CA HA3 sing N N 172 GLY C O doub N N 173 GLY C OXT sing N N 174 GLY OXT HXT sing N N 175 HIS N CA sing N N 176 HIS N H sing N N 177 HIS N H2 sing N N 178 HIS CA C sing N N 179 HIS CA CB sing N N 180 HIS CA HA sing N N 181 HIS C O doub N N 182 HIS C OXT sing N N 183 HIS CB CG sing N N 184 HIS CB HB2 sing N N 185 HIS CB HB3 sing N N 186 HIS CG ND1 sing Y N 187 HIS CG CD2 doub Y N 188 HIS ND1 CE1 doub Y N 189 HIS ND1 HD1 sing N N 190 HIS CD2 NE2 sing Y N 191 HIS CD2 HD2 sing N N 192 HIS CE1 NE2 sing Y N 193 HIS CE1 HE1 sing N N 194 HIS NE2 HE2 sing N N 195 HIS OXT HXT sing N N 196 HOH O H1 sing N N 197 HOH O H2 sing N N 198 ILE N CA sing N N 199 ILE N H sing N N 200 ILE N H2 sing N N 201 ILE CA C sing N N 202 ILE CA CB sing N N 203 ILE CA HA sing N N 204 ILE C O doub N N 205 ILE C OXT sing N N 206 ILE CB CG1 sing N N 207 ILE CB CG2 sing N N 208 ILE CB HB sing N N 209 ILE CG1 CD1 sing N N 210 ILE CG1 HG12 sing N N 211 ILE CG1 HG13 sing N N 212 ILE CG2 HG21 sing N N 213 ILE CG2 HG22 sing N N 214 ILE CG2 HG23 sing N N 215 ILE CD1 HD11 sing N N 216 ILE CD1 HD12 sing N N 217 ILE CD1 HD13 sing N N 218 ILE OXT HXT sing N N 219 LEU N CA sing N N 220 LEU N H sing N N 221 LEU N H2 sing N N 222 LEU CA C sing N N 223 LEU CA CB sing N N 224 LEU CA HA sing N N 225 LEU C O doub N N 226 LEU C OXT sing N N 227 LEU CB CG sing N N 228 LEU CB HB2 sing N N 229 LEU CB HB3 sing N N 230 LEU CG CD1 sing N N 231 LEU CG CD2 sing N N 232 LEU CG HG sing N N 233 LEU CD1 HD11 sing N N 234 LEU CD1 HD12 sing N N 235 LEU CD1 HD13 sing N N 236 LEU CD2 HD21 sing N N 237 LEU CD2 HD22 sing N N 238 LEU CD2 HD23 sing N N 239 LEU OXT HXT sing N N 240 LYS N CA sing N N 241 LYS N H sing N N 242 LYS N H2 sing N N 243 LYS CA C sing N N 244 LYS CA CB sing N N 245 LYS CA HA sing N N 246 LYS C O doub N N 247 LYS C OXT sing N N 248 LYS CB CG sing N N 249 LYS CB HB2 sing N N 250 LYS CB HB3 sing N N 251 LYS CG CD sing N N 252 LYS CG HG2 sing N N 253 LYS CG HG3 sing N N 254 LYS CD CE sing N N 255 LYS CD HD2 sing N N 256 LYS CD HD3 sing N N 257 LYS CE NZ sing N N 258 LYS CE HE2 sing N N 259 LYS CE HE3 sing N N 260 LYS NZ HZ1 sing N N 261 LYS NZ HZ2 sing N N 262 LYS NZ HZ3 sing N N 263 LYS OXT HXT sing N N 264 MET N CA sing N N 265 MET N H sing N N 266 MET N H2 sing N N 267 MET CA C sing N N 268 MET CA CB sing N N 269 MET CA HA sing N N 270 MET C O doub N N 271 MET C OXT sing N N 272 MET CB CG sing N N 273 MET CB HB2 sing N N 274 MET CB HB3 sing N N 275 MET CG SD sing N N 276 MET CG HG2 sing N N 277 MET CG HG3 sing N N 278 MET SD CE sing N N 279 MET CE HE1 sing N N 280 MET CE HE2 sing N N 281 MET CE HE3 sing N N 282 MET OXT HXT sing N N 283 NAG C1 C2 sing N N 284 NAG C1 O1 sing N N 285 NAG C1 O5 sing N N 286 NAG C1 H1 sing N N 287 NAG C2 C3 sing N N 288 NAG C2 N2 sing N N 289 NAG C2 H2 sing N N 290 NAG C3 C4 sing N N 291 NAG C3 O3 sing N N 292 NAG C3 H3 sing N N 293 NAG C4 C5 sing N N 294 NAG C4 O4 sing N N 295 NAG C4 H4 sing N N 296 NAG C5 C6 sing N N 297 NAG C5 O5 sing N N 298 NAG C5 H5 sing N N 299 NAG C6 O6 sing N N 300 NAG C6 H61 sing N N 301 NAG C6 H62 sing N N 302 NAG C7 C8 sing N N 303 NAG C7 N2 sing N N 304 NAG C7 O7 doub N N 305 NAG C8 H81 sing N N 306 NAG C8 H82 sing N N 307 NAG C8 H83 sing N N 308 NAG N2 HN2 sing N N 309 NAG O1 HO1 sing N N 310 NAG O3 HO3 sing N N 311 NAG O4 HO4 sing N N 312 NAG O6 HO6 sing N N 313 PHE N CA sing N N 314 PHE N H sing N N 315 PHE N H2 sing N N 316 PHE CA C sing N N 317 PHE CA CB sing N N 318 PHE CA HA sing N N 319 PHE C O doub N N 320 PHE C OXT sing N N 321 PHE CB CG sing N N 322 PHE CB HB2 sing N N 323 PHE CB HB3 sing N N 324 PHE CG CD1 doub Y N 325 PHE CG CD2 sing Y N 326 PHE CD1 CE1 sing Y N 327 PHE CD1 HD1 sing N N 328 PHE CD2 CE2 doub Y N 329 PHE CD2 HD2 sing N N 330 PHE CE1 CZ doub Y N 331 PHE CE1 HE1 sing N N 332 PHE CE2 CZ sing Y N 333 PHE CE2 HE2 sing N N 334 PHE CZ HZ sing N N 335 PHE OXT HXT sing N N 336 PRO N CA sing N N 337 PRO N CD sing N N 338 PRO N H sing N N 339 PRO CA C sing N N 340 PRO CA CB sing N N 341 PRO CA HA sing N N 342 PRO C O doub N N 343 PRO C OXT sing N N 344 PRO CB CG sing N N 345 PRO CB HB2 sing N N 346 PRO CB HB3 sing N N 347 PRO CG CD sing N N 348 PRO CG HG2 sing N N 349 PRO CG HG3 sing N N 350 PRO CD HD2 sing N N 351 PRO CD HD3 sing N N 352 PRO OXT HXT sing N N 353 SER N CA sing N N 354 SER N H sing N N 355 SER N H2 sing N N 356 SER CA C sing N N 357 SER CA CB sing N N 358 SER CA HA sing N N 359 SER C O doub N N 360 SER C OXT sing N N 361 SER CB OG sing N N 362 SER CB HB2 sing N N 363 SER CB HB3 sing N N 364 SER OG HG sing N N 365 SER OXT HXT sing N N 366 SO4 S O1 doub N N 367 SO4 S O2 doub N N 368 SO4 S O3 sing N N 369 SO4 S O4 sing N N 370 THR N CA sing N N 371 THR N H sing N N 372 THR N H2 sing N N 373 THR CA C sing N N 374 THR CA CB sing N N 375 THR CA HA sing N N 376 THR C O doub N N 377 THR C OXT sing N N 378 THR CB OG1 sing N N 379 THR CB CG2 sing N N 380 THR CB HB sing N N 381 THR OG1 HG1 sing N N 382 THR CG2 HG21 sing N N 383 THR CG2 HG22 sing N N 384 THR CG2 HG23 sing N N 385 THR OXT HXT sing N N 386 TRP N CA sing N N 387 TRP N H sing N N 388 TRP N H2 sing N N 389 TRP CA C sing N N 390 TRP CA CB sing N N 391 TRP CA HA sing N N 392 TRP C O doub N N 393 TRP C OXT sing N N 394 TRP CB CG sing N N 395 TRP CB HB2 sing N N 396 TRP CB HB3 sing N N 397 TRP CG CD1 doub Y N 398 TRP CG CD2 sing Y N 399 TRP CD1 NE1 sing Y N 400 TRP CD1 HD1 sing N N 401 TRP CD2 CE2 doub Y N 402 TRP CD2 CE3 sing Y N 403 TRP NE1 CE2 sing Y N 404 TRP NE1 HE1 sing N N 405 TRP CE2 CZ2 sing Y N 406 TRP CE3 CZ3 doub Y N 407 TRP CE3 HE3 sing N N 408 TRP CZ2 CH2 doub Y N 409 TRP CZ2 HZ2 sing N N 410 TRP CZ3 CH2 sing Y N 411 TRP CZ3 HZ3 sing N N 412 TRP CH2 HH2 sing N N 413 TRP OXT HXT sing N N 414 TYR N CA sing N N 415 TYR N H sing N N 416 TYR N H2 sing N N 417 TYR CA C sing N N 418 TYR CA CB sing N N 419 TYR CA HA sing N N 420 TYR C O doub N N 421 TYR C OXT sing N N 422 TYR CB CG sing N N 423 TYR CB HB2 sing N N 424 TYR CB HB3 sing N N 425 TYR CG CD1 doub Y N 426 TYR CG CD2 sing Y N 427 TYR CD1 CE1 sing Y N 428 TYR CD1 HD1 sing N N 429 TYR CD2 CE2 doub Y N 430 TYR CD2 HD2 sing N N 431 TYR CE1 CZ doub Y N 432 TYR CE1 HE1 sing N N 433 TYR CE2 CZ sing Y N 434 TYR CE2 HE2 sing N N 435 TYR CZ OH sing N N 436 TYR OH HH sing N N 437 TYR OXT HXT sing N N 438 VAL N CA sing N N 439 VAL N H sing N N 440 VAL N H2 sing N N 441 VAL CA C sing N N 442 VAL CA CB sing N N 443 VAL CA HA sing N N 444 VAL C O doub N N 445 VAL C OXT sing N N 446 VAL CB CG1 sing N N 447 VAL CB CG2 sing N N 448 VAL CB HB sing N N 449 VAL CG1 HG11 sing N N 450 VAL CG1 HG12 sing N N 451 VAL CG1 HG13 sing N N 452 VAL CG2 HG21 sing N N 453 VAL CG2 HG22 sing N N 454 VAL CG2 HG23 sing N N 455 VAL OXT HXT sing N N 456 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 223 n B 2 FUC 2 B FUC 2 A FUC 224 n C 3 NAG 1 C NAG 1 A NAG 225 n C 3 NAG 2 C NAG 2 A NAG 226 n C 3 BMA 3 C BMA 3 A BMA 227 n C 3 FUC 4 C FUC 4 A FUC 228 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 LFucpa1-3DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,2,1/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-2/a3-b1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(3+1)][a-L-Fucp]{}}}' LINUCS PDB-CARE ? 4 3 'DManpb1-4DGlcpNAcb1-4[LFucpa1-3]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 5 3 'WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5][a1122h-1b_1-5]/1-2-1-3/a3-b1_a4-c1_c4-d1' WURCS PDB2Glycan 1.1.0 6 3 '[]{[(4+1)][b-D-GlcpNAc]{[(3+1)][a-L-Fucp]{}[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 FUC C1 O1 1 NAG O3 HO3 sing ? 2 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? 3 3 3 BMA C1 O1 2 NAG O4 HO4 sing ? 4 3 4 FUC C1 O1 1 NAG O3 HO3 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 FUC 2 n 3 NAG 1 n 3 NAG 2 n 3 BMA 3 n 3 FUC 4 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'SULFATE ION' SO4 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1U53 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'native gel electrophoresis' _pdbx_struct_assembly_auth_evidence.details ? #