data_6AVS # _entry.id 6AVS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6AVS pdb_00006avs 10.2210/pdb6avs/pdb WWPDB D_1000229910 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6AVS _pdbx_database_status.recvd_initial_deposition_date 2017-09-04 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Lee, S.' 1 ? 'Liu, H.' 2 ? 'Wang, Y.' 3 ? 'Dai, S.' 4 ? 'Zhang, G.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Sci Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2045-2322 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 8 _citation.language ? _citation.page_first 3275 _citation.page_last 3275 _citation.title 'Specific Recognition of Arginine Methylated Histone Tails by JMJD5 and JMJD7.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41598-018-21432-8 _citation.pdbx_database_id_PubMed 29459673 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Liu, H.' 1 ? primary 'Wang, C.' 2 ? primary 'Lee, S.' 3 ? primary 'Ning, F.' 4 ? primary 'Wang, Y.' 5 ? primary 'Zhang, Q.' 6 ? primary 'Chen, Z.' 7 ? primary 'Zang, J.' 8 ? primary 'Nix, J.' 9 ? primary 'Dai, S.' 10 ? primary 'Marrack, P.' 11 ? primary 'Hagman, J.' 12 ? primary 'Kappler, J.' 13 ? primary 'Zhang, G.' 14 ? # _cell.entry_id 6AVS _cell.length_a 49.685 _cell.length_b 65.063 _cell.length_c 78.139 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AVS _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Lysine-specific demethylase 8' 27288.898 1 1.14.11.27 ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 3 non-polymer man '(2S)-2-amino-5-[(N-methylcarbamimidoyl)amino]pentanoic acid' 188.228 1 ? ? ? ? 4 water nat water 18.015 89 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'JmjC domain-containing protein 5,Jumonji domain-containing protein 5' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GGTVPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGSRYTDEEWSQTLMTVNEFIS KYIVNEPRDVGYLAQHQLFDQIPELKQDISIPDYCSLGDGEEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYIRL YSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWWS ; _entity_poly.pdbx_seq_one_letter_code_can ;GGTVPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGSRYTDEEWSQTLMTVNEFIS KYIVNEPRDVGYLAQHQLFDQIPELKQDISIPDYCSLGDGEEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYIRL YSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWWS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLY n 1 3 THR n 1 4 VAL n 1 5 PRO n 1 6 ARG n 1 7 LEU n 1 8 HIS n 1 9 ARG n 1 10 PRO n 1 11 SER n 1 12 LEU n 1 13 GLN n 1 14 HIS n 1 15 PHE n 1 16 ARG n 1 17 GLU n 1 18 GLN n 1 19 PHE n 1 20 LEU n 1 21 VAL n 1 22 PRO n 1 23 GLY n 1 24 ARG n 1 25 PRO n 1 26 VAL n 1 27 ILE n 1 28 LEU n 1 29 LYS n 1 30 GLY n 1 31 VAL n 1 32 ALA n 1 33 ASP n 1 34 HIS n 1 35 TRP n 1 36 PRO n 1 37 CYS n 1 38 MET n 1 39 GLN n 1 40 LYS n 1 41 TRP n 1 42 SER n 1 43 LEU n 1 44 GLU n 1 45 TYR n 1 46 ILE n 1 47 GLN n 1 48 GLU n 1 49 ILE n 1 50 ALA n 1 51 GLY n 1 52 CYS n 1 53 ARG n 1 54 THR n 1 55 VAL n 1 56 PRO n 1 57 VAL n 1 58 GLU n 1 59 VAL n 1 60 GLY n 1 61 SER n 1 62 ARG n 1 63 TYR n 1 64 THR n 1 65 ASP n 1 66 GLU n 1 67 GLU n 1 68 TRP n 1 69 SER n 1 70 GLN n 1 71 THR n 1 72 LEU n 1 73 MET n 1 74 THR n 1 75 VAL n 1 76 ASN n 1 77 GLU n 1 78 PHE n 1 79 ILE n 1 80 SER n 1 81 LYS n 1 82 TYR n 1 83 ILE n 1 84 VAL n 1 85 ASN n 1 86 GLU n 1 87 PRO n 1 88 ARG n 1 89 ASP n 1 90 VAL n 1 91 GLY n 1 92 TYR n 1 93 LEU n 1 94 ALA n 1 95 GLN n 1 96 HIS n 1 97 GLN n 1 98 LEU n 1 99 PHE n 1 100 ASP n 1 101 GLN n 1 102 ILE n 1 103 PRO n 1 104 GLU n 1 105 LEU n 1 106 LYS n 1 107 GLN n 1 108 ASP n 1 109 ILE n 1 110 SER n 1 111 ILE n 1 112 PRO n 1 113 ASP n 1 114 TYR n 1 115 CYS n 1 116 SER n 1 117 LEU n 1 118 GLY n 1 119 ASP n 1 120 GLY n 1 121 GLU n 1 122 GLU n 1 123 GLU n 1 124 GLU n 1 125 ILE n 1 126 THR n 1 127 ILE n 1 128 ASN n 1 129 ALA n 1 130 TRP n 1 131 PHE n 1 132 GLY n 1 133 PRO n 1 134 GLN n 1 135 GLY n 1 136 THR n 1 137 ILE n 1 138 SER n 1 139 PRO n 1 140 LEU n 1 141 HIS n 1 142 GLN n 1 143 ASP n 1 144 PRO n 1 145 GLN n 1 146 GLN n 1 147 ASN n 1 148 PHE n 1 149 LEU n 1 150 VAL n 1 151 GLN n 1 152 VAL n 1 153 MET n 1 154 GLY n 1 155 ARG n 1 156 LYS n 1 157 TYR n 1 158 ILE n 1 159 ARG n 1 160 LEU n 1 161 TYR n 1 162 SER n 1 163 PRO n 1 164 GLN n 1 165 GLU n 1 166 SER n 1 167 GLY n 1 168 ALA n 1 169 LEU n 1 170 TYR n 1 171 PRO n 1 172 HIS n 1 173 ASP n 1 174 THR n 1 175 HIS n 1 176 LEU n 1 177 LEU n 1 178 HIS n 1 179 ASN n 1 180 THR n 1 181 SER n 1 182 GLN n 1 183 VAL n 1 184 ASP n 1 185 VAL n 1 186 GLU n 1 187 ASN n 1 188 PRO n 1 189 ASP n 1 190 LEU n 1 191 GLU n 1 192 LYS n 1 193 PHE n 1 194 PRO n 1 195 LYS n 1 196 PHE n 1 197 ALA n 1 198 LYS n 1 199 ALA n 1 200 PRO n 1 201 PHE n 1 202 LEU n 1 203 SER n 1 204 CYS n 1 205 ILE n 1 206 LEU n 1 207 SER n 1 208 PRO n 1 209 GLY n 1 210 GLU n 1 211 ILE n 1 212 LEU n 1 213 PHE n 1 214 ILE n 1 215 PRO n 1 216 VAL n 1 217 LYS n 1 218 TYR n 1 219 TRP n 1 220 HIS n 1 221 TYR n 1 222 VAL n 1 223 ARG n 1 224 ALA n 1 225 LEU n 1 226 ASP n 1 227 LEU n 1 228 SER n 1 229 PHE n 1 230 SER n 1 231 VAL n 1 232 SER n 1 233 PHE n 1 234 TRP n 1 235 TRP n 1 236 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 236 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'KDM8, JMJD5' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ;Escherichia coli 'BL21-Gold(DE3)pLysS AG' ; _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 866768 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code KDM8_HUMAN _struct_ref.pdbx_db_accession Q8N371 _struct_ref.pdbx_db_isoform Q8N371-3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TVPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGSRYTDEEWSQTLMTVNEFISKY IVNEPRDVGYLAQHQLFDQIPELKQDISIPDYCSLGDGEEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYIRLYS PQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWWS ; _struct_ref.pdbx_align_begin 221 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6AVS _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 236 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8N371 _struct_ref_seq.db_align_beg 221 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 454 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 183 _struct_ref_seq.pdbx_auth_seq_align_end 416 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6AVS GLY A 1 ? UNP Q8N371 ? ? 'expression tag' 181 1 1 6AVS GLY A 2 ? UNP Q8N371 ? ? 'expression tag' 182 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NMM 'L-peptide linking' n '(2S)-2-amino-5-[(N-methylcarbamimidoyl)amino]pentanoic acid' L-NMMA 'C7 H16 N4 O2' 188.228 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6AVS _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.30 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 46.45 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.1M HEPES pH 7.0 8% PEG 3350 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-03-23 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9795 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_synchrotron_site APS # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 6AVS _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 49.999 _reflns.d_resolution_high 2.000 _reflns.number_obs 17227 _reflns.number_all ? _reflns.percent_possible_obs 99.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.6400 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.500 # _reflns_shell.d_res_high . _reflns_shell.d_res_low ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 6AVS _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 17149 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.330 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.00 _refine.ls_d_res_high 2.02 _refine.ls_percent_reflns_obs 99.3 _refine.ls_R_factor_obs 0.244 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.241 _refine.ls_R_factor_R_free 0.272 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.010 _refine.ls_number_reflns_R_free 1716 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model 5FBJ _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.290 _refine.pdbx_overall_phase_error 29.540 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1820 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 89 _refine_hist.number_atoms_total 1910 _refine_hist.d_res_high 2.02 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.026 ? ? 1889 'X-RAY DIFFRACTION' ? f_angle_d 1.917 ? ? 2582 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 21.668 ? ? 1012 'X-RAY DIFFRACTION' ? f_chiral_restr 0.169 ? ? 276 'X-RAY DIFFRACTION' ? f_plane_restr 0.013 ? ? 334 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.0173 2.0767 1223 0.4185 96.00 0.4080 . . 137 . . 'X-RAY DIFFRACTION' . 2.0767 2.1437 1249 0.3299 99.00 0.3580 . . 142 . . 'X-RAY DIFFRACTION' . 2.1437 2.2204 1250 0.3793 99.00 0.3939 . . 137 . . 'X-RAY DIFFRACTION' . 2.2204 2.3093 1263 0.4364 98.00 0.5116 . . 138 . . 'X-RAY DIFFRACTION' . 2.3093 2.4143 1273 0.2580 100.00 0.2807 . . 141 . . 'X-RAY DIFFRACTION' . 2.4143 2.5416 1279 0.2585 100.00 0.2646 . . 142 . . 'X-RAY DIFFRACTION' . 2.5416 2.7009 1282 0.2588 100.00 0.2747 . . 141 . . 'X-RAY DIFFRACTION' . 2.7009 2.9094 1297 0.2689 100.00 0.2836 . . 146 . . 'X-RAY DIFFRACTION' . 2.9094 3.2021 1279 0.2523 100.00 0.2790 . . 141 . . 'X-RAY DIFFRACTION' . 3.2021 3.6653 1313 0.2196 100.00 0.2485 . . 146 . . 'X-RAY DIFFRACTION' . 3.6653 4.6174 1330 0.1708 100.00 0.2043 . . 148 . . 'X-RAY DIFFRACTION' . 4.6174 50.0147 1395 0.1982 100.00 0.2388 . . 157 . . # _struct.entry_id 6AVS _struct.title 'Complex structure of JMJD5 and Symmetric Monomethyl-Arginine (MMA)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6AVS _struct_keywords.text 'Demethylase, Jumonji, Histone, Endopeptidase, Exopeptidase, OXIDOREDUCTASE' _struct_keywords.pdbx_keywords OXIDOREDUCTASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 11 ? PHE A 19 ? SER A 191 PHE A 199 1 ? 9 HELX_P HELX_P2 AA2 TRP A 35 ? TRP A 41 ? TRP A 215 TRP A 221 1 ? 7 HELX_P HELX_P3 AA3 SER A 42 ? GLY A 51 ? SER A 222 GLY A 231 1 ? 10 HELX_P HELX_P4 AA4 VAL A 75 ? ILE A 83 ? VAL A 255 ILE A 263 1 ? 9 HELX_P HELX_P5 AA5 GLN A 97 ? ILE A 102 ? GLN A 277 ILE A 282 1 ? 6 HELX_P HELX_P6 AA6 GLU A 104 ? ILE A 109 ? GLU A 284 ILE A 289 5 ? 6 HELX_P HELX_P7 AA7 PRO A 112 ? GLY A 118 ? PRO A 292 GLY A 298 5 ? 7 HELX_P HELX_P8 AA8 GLU A 121 ? ILE A 125 ? GLU A 301 ILE A 305 5 ? 5 HELX_P HELX_P9 AA9 SER A 162 ? TYR A 170 ? SER A 342 TYR A 350 5 ? 9 HELX_P HELX_P10 AB1 PHE A 193 ? ALA A 197 ? PHE A 373 ALA A 377 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 141 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 321 A ZN 501 1_555 ? ? ? ? ? ? ? 1.971 ? ? metalc2 metalc ? ? A ASP 143 OD2 ? ? ? 1_555 B ZN . ZN ? ? A ASP 323 A ZN 501 1_555 ? ? ? ? ? ? ? 2.196 ? ? metalc3 metalc ? ? A HIS 220 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 400 A ZN 501 1_555 ? ? ? ? ? ? ? 1.962 ? ? metalc4 metalc ? ? B ZN . ZN ? ? ? 1_555 C NMM . O ? ? A ZN 501 A NMM 502 1_555 ? ? ? ? ? ? ? 2.413 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 9 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA1 8 9 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ARG A 6 ? HIS A 8 ? ARG A 186 HIS A 188 AA1 2 VAL A 26 ? LYS A 29 ? VAL A 206 LYS A 209 AA1 3 ILE A 211 ? ILE A 214 ? ILE A 391 ILE A 394 AA1 4 GLN A 146 ? MET A 153 ? GLN A 326 MET A 333 AA1 5 SER A 228 ? TRP A 235 ? SER A 408 TRP A 415 AA1 6 THR A 126 ? GLY A 132 ? THR A 306 GLY A 312 AA1 7 GLY A 91 ? HIS A 96 ? GLY A 271 HIS A 276 AA1 8 THR A 54 ? VAL A 59 ? THR A 234 VAL A 239 AA1 9 SER A 69 ? THR A 74 ? SER A 249 THR A 254 AA2 1 ILE A 137 ? HIS A 141 ? ILE A 317 HIS A 321 AA2 2 TRP A 219 ? ALA A 224 ? TRP A 399 ALA A 404 AA2 3 LYS A 156 ? TYR A 161 ? LYS A 336 TYR A 341 AA2 4 LEU A 202 ? LEU A 206 ? LEU A 382 LEU A 386 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 7 ? N LEU A 187 O LYS A 29 ? O LYS A 209 AA1 2 3 N LEU A 28 ? N LEU A 208 O ILE A 211 ? O ILE A 391 AA1 3 4 O ILE A 214 ? O ILE A 394 N ASN A 147 ? N ASN A 327 AA1 4 5 N VAL A 150 ? N VAL A 330 O VAL A 231 ? O VAL A 411 AA1 5 6 O TRP A 234 ? O TRP A 414 N THR A 126 ? N THR A 306 AA1 6 7 O PHE A 131 ? O PHE A 311 N LEU A 93 ? N LEU A 273 AA1 7 8 O TYR A 92 ? O TYR A 272 N GLU A 58 ? N GLU A 238 AA1 8 9 N VAL A 55 ? N VAL A 235 O MET A 73 ? O MET A 253 AA2 1 2 N SER A 138 ? N SER A 318 O VAL A 222 ? O VAL A 402 AA2 2 3 O TRP A 219 ? O TRP A 399 N TYR A 161 ? N TYR A 341 AA2 3 4 N LEU A 160 ? N LEU A 340 O LEU A 202 ? O LEU A 382 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 501 ? 4 'binding site for residue ZN A 501' AC2 Software A NMM 502 ? 9 'binding site for residue NMM A 502' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HIS A 141 ? HIS A 321 . ? 1_555 ? 2 AC1 4 ASP A 143 ? ASP A 323 . ? 1_555 ? 3 AC1 4 HIS A 220 ? HIS A 400 . ? 1_555 ? 4 AC1 4 NMM C . ? NMM A 502 . ? 1_555 ? 5 AC2 9 GLU A 58 ? GLU A 238 . ? 1_555 ? 6 AC2 9 TYR A 63 ? TYR A 243 . ? 1_555 ? 7 AC2 9 TYR A 92 ? TYR A 272 . ? 1_555 ? 8 AC2 9 GLN A 95 ? GLN A 275 . ? 1_555 ? 9 AC2 9 TRP A 130 ? TRP A 310 . ? 1_555 ? 10 AC2 9 SER A 138 ? SER A 318 . ? 1_555 ? 11 AC2 9 HIS A 141 ? HIS A 321 . ? 1_555 ? 12 AC2 9 ASP A 143 ? ASP A 323 . ? 1_555 ? 13 AC2 9 ZN B . ? ZN A 501 . ? 1_555 ? # _atom_sites.entry_id 6AVS _atom_sites.fract_transf_matrix[1][1] 0.020127 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015370 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012798 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_ _database_PDB_caveat.text 'NMM has a RSR of 0.59' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 181 181 GLY GLY A . n A 1 2 GLY 2 182 182 GLY GLY A . n A 1 3 THR 3 183 183 THR THR A . n A 1 4 VAL 4 184 184 VAL VAL A . n A 1 5 PRO 5 185 185 PRO PRO A . n A 1 6 ARG 6 186 186 ARG ARG A . n A 1 7 LEU 7 187 187 LEU LEU A . n A 1 8 HIS 8 188 188 HIS HIS A . n A 1 9 ARG 9 189 189 ARG ARG A . n A 1 10 PRO 10 190 190 PRO PRO A . n A 1 11 SER 11 191 191 SER SER A . n A 1 12 LEU 12 192 192 LEU LEU A . n A 1 13 GLN 13 193 193 GLN GLN A . n A 1 14 HIS 14 194 194 HIS HIS A . n A 1 15 PHE 15 195 195 PHE PHE A . n A 1 16 ARG 16 196 196 ARG ARG A . n A 1 17 GLU 17 197 197 GLU GLU A . n A 1 18 GLN 18 198 198 GLN GLN A . n A 1 19 PHE 19 199 199 PHE PHE A . n A 1 20 LEU 20 200 200 LEU LEU A . n A 1 21 VAL 21 201 201 VAL VAL A . n A 1 22 PRO 22 202 202 PRO PRO A . n A 1 23 GLY 23 203 203 GLY GLY A . n A 1 24 ARG 24 204 204 ARG ARG A . n A 1 25 PRO 25 205 205 PRO PRO A . n A 1 26 VAL 26 206 206 VAL VAL A . n A 1 27 ILE 27 207 207 ILE ILE A . n A 1 28 LEU 28 208 208 LEU LEU A . n A 1 29 LYS 29 209 209 LYS LYS A . n A 1 30 GLY 30 210 210 GLY GLY A . n A 1 31 VAL 31 211 211 VAL VAL A . n A 1 32 ALA 32 212 212 ALA ALA A . n A 1 33 ASP 33 213 213 ASP ASP A . n A 1 34 HIS 34 214 214 HIS HIS A . n A 1 35 TRP 35 215 215 TRP TRP A . n A 1 36 PRO 36 216 216 PRO PRO A . n A 1 37 CYS 37 217 217 CYS CYS A . n A 1 38 MET 38 218 218 MET MET A . n A 1 39 GLN 39 219 219 GLN GLN A . n A 1 40 LYS 40 220 220 LYS LYS A . n A 1 41 TRP 41 221 221 TRP TRP A . n A 1 42 SER 42 222 222 SER SER A . n A 1 43 LEU 43 223 223 LEU LEU A . n A 1 44 GLU 44 224 224 GLU GLU A . n A 1 45 TYR 45 225 225 TYR TYR A . n A 1 46 ILE 46 226 226 ILE ILE A . n A 1 47 GLN 47 227 227 GLN GLN A . n A 1 48 GLU 48 228 228 GLU GLU A . n A 1 49 ILE 49 229 229 ILE ILE A . n A 1 50 ALA 50 230 230 ALA ALA A . n A 1 51 GLY 51 231 231 GLY GLY A . n A 1 52 CYS 52 232 232 CYS CYS A . n A 1 53 ARG 53 233 233 ARG ARG A . n A 1 54 THR 54 234 234 THR THR A . n A 1 55 VAL 55 235 235 VAL VAL A . n A 1 56 PRO 56 236 236 PRO PRO A . n A 1 57 VAL 57 237 237 VAL VAL A . n A 1 58 GLU 58 238 238 GLU GLU A . n A 1 59 VAL 59 239 239 VAL VAL A . n A 1 60 GLY 60 240 240 GLY GLY A . n A 1 61 SER 61 241 241 SER SER A . n A 1 62 ARG 62 242 242 ARG ARG A . n A 1 63 TYR 63 243 243 TYR TYR A . n A 1 64 THR 64 244 244 THR THR A . n A 1 65 ASP 65 245 245 ASP ASP A . n A 1 66 GLU 66 246 246 GLU GLU A . n A 1 67 GLU 67 247 247 GLU GLU A . n A 1 68 TRP 68 248 248 TRP TRP A . n A 1 69 SER 69 249 249 SER SER A . n A 1 70 GLN 70 250 250 GLN GLN A . n A 1 71 THR 71 251 251 THR THR A . n A 1 72 LEU 72 252 252 LEU LEU A . n A 1 73 MET 73 253 253 MET MET A . n A 1 74 THR 74 254 254 THR THR A . n A 1 75 VAL 75 255 255 VAL VAL A . n A 1 76 ASN 76 256 256 ASN ASN A . n A 1 77 GLU 77 257 257 GLU GLU A . n A 1 78 PHE 78 258 258 PHE PHE A . n A 1 79 ILE 79 259 259 ILE ILE A . n A 1 80 SER 80 260 260 SER SER A . n A 1 81 LYS 81 261 261 LYS LYS A . n A 1 82 TYR 82 262 262 TYR TYR A . n A 1 83 ILE 83 263 263 ILE ILE A . n A 1 84 VAL 84 264 264 VAL VAL A . n A 1 85 ASN 85 265 265 ASN ASN A . n A 1 86 GLU 86 266 266 GLU GLU A . n A 1 87 PRO 87 267 267 PRO PRO A . n A 1 88 ARG 88 268 268 ARG ARG A . n A 1 89 ASP 89 269 269 ASP ASP A . n A 1 90 VAL 90 270 270 VAL VAL A . n A 1 91 GLY 91 271 271 GLY GLY A . n A 1 92 TYR 92 272 272 TYR TYR A . n A 1 93 LEU 93 273 273 LEU LEU A . n A 1 94 ALA 94 274 274 ALA ALA A . n A 1 95 GLN 95 275 275 GLN GLN A . n A 1 96 HIS 96 276 276 HIS HIS A . n A 1 97 GLN 97 277 277 GLN GLN A . n A 1 98 LEU 98 278 278 LEU LEU A . n A 1 99 PHE 99 279 279 PHE PHE A . n A 1 100 ASP 100 280 280 ASP ASP A . n A 1 101 GLN 101 281 281 GLN GLN A . n A 1 102 ILE 102 282 282 ILE ILE A . n A 1 103 PRO 103 283 283 PRO PRO A . n A 1 104 GLU 104 284 284 GLU GLU A . n A 1 105 LEU 105 285 285 LEU LEU A . n A 1 106 LYS 106 286 286 LYS LYS A . n A 1 107 GLN 107 287 287 GLN GLN A . n A 1 108 ASP 108 288 288 ASP ASP A . n A 1 109 ILE 109 289 289 ILE ILE A . n A 1 110 SER 110 290 290 SER SER A . n A 1 111 ILE 111 291 291 ILE ILE A . n A 1 112 PRO 112 292 292 PRO PRO A . n A 1 113 ASP 113 293 293 ASP ASP A . n A 1 114 TYR 114 294 294 TYR TYR A . n A 1 115 CYS 115 295 295 CYS CYS A . n A 1 116 SER 116 296 296 SER SER A . n A 1 117 LEU 117 297 297 LEU LEU A . n A 1 118 GLY 118 298 298 GLY GLY A . n A 1 119 ASP 119 299 299 ASP ASP A . n A 1 120 GLY 120 300 300 GLY GLY A . n A 1 121 GLU 121 301 301 GLU GLU A . n A 1 122 GLU 122 302 302 GLU GLU A . n A 1 123 GLU 123 303 303 GLU GLU A . n A 1 124 GLU 124 304 304 GLU GLU A . n A 1 125 ILE 125 305 305 ILE ILE A . n A 1 126 THR 126 306 306 THR THR A . n A 1 127 ILE 127 307 307 ILE ILE A . n A 1 128 ASN 128 308 308 ASN ASN A . n A 1 129 ALA 129 309 309 ALA ALA A . n A 1 130 TRP 130 310 310 TRP TRP A . n A 1 131 PHE 131 311 311 PHE PHE A . n A 1 132 GLY 132 312 312 GLY GLY A . n A 1 133 PRO 133 313 313 PRO PRO A . n A 1 134 GLN 134 314 314 GLN GLN A . n A 1 135 GLY 135 315 315 GLY GLY A . n A 1 136 THR 136 316 316 THR THR A . n A 1 137 ILE 137 317 317 ILE ILE A . n A 1 138 SER 138 318 318 SER SER A . n A 1 139 PRO 139 319 319 PRO PRO A . n A 1 140 LEU 140 320 320 LEU LEU A . n A 1 141 HIS 141 321 321 HIS HIS A . n A 1 142 GLN 142 322 322 GLN GLN A . n A 1 143 ASP 143 323 323 ASP ASP A . n A 1 144 PRO 144 324 324 PRO PRO A . n A 1 145 GLN 145 325 325 GLN GLN A . n A 1 146 GLN 146 326 326 GLN GLN A . n A 1 147 ASN 147 327 327 ASN ASN A . n A 1 148 PHE 148 328 328 PHE PHE A . n A 1 149 LEU 149 329 329 LEU LEU A . n A 1 150 VAL 150 330 330 VAL VAL A . n A 1 151 GLN 151 331 331 GLN GLN A . n A 1 152 VAL 152 332 332 VAL VAL A . n A 1 153 MET 153 333 333 MET MET A . n A 1 154 GLY 154 334 334 GLY GLY A . n A 1 155 ARG 155 335 335 ARG ARG A . n A 1 156 LYS 156 336 336 LYS LYS A . n A 1 157 TYR 157 337 337 TYR TYR A . n A 1 158 ILE 158 338 338 ILE ILE A . n A 1 159 ARG 159 339 339 ARG ARG A . n A 1 160 LEU 160 340 340 LEU LEU A . n A 1 161 TYR 161 341 341 TYR TYR A . n A 1 162 SER 162 342 342 SER SER A . n A 1 163 PRO 163 343 343 PRO PRO A . n A 1 164 GLN 164 344 344 GLN GLN A . n A 1 165 GLU 165 345 345 GLU GLU A . n A 1 166 SER 166 346 346 SER SER A . n A 1 167 GLY 167 347 347 GLY GLY A . n A 1 168 ALA 168 348 348 ALA ALA A . n A 1 169 LEU 169 349 349 LEU LEU A . n A 1 170 TYR 170 350 350 TYR TYR A . n A 1 171 PRO 171 351 351 PRO PRO A . n A 1 172 HIS 172 352 352 HIS HIS A . n A 1 173 ASP 173 353 353 ASP ASP A . n A 1 174 THR 174 354 354 THR THR A . n A 1 175 HIS 175 355 355 HIS HIS A . n A 1 176 LEU 176 356 356 LEU LEU A . n A 1 177 LEU 177 357 357 LEU LEU A . n A 1 178 HIS 178 358 358 HIS HIS A . n A 1 179 ASN 179 359 359 ASN ASN A . n A 1 180 THR 180 360 360 THR THR A . n A 1 181 SER 181 361 361 SER SER A . n A 1 182 GLN 182 362 362 GLN GLN A . n A 1 183 VAL 183 363 363 VAL VAL A . n A 1 184 ASP 184 364 364 ASP ASP A . n A 1 185 VAL 185 365 365 VAL VAL A . n A 1 186 GLU 186 366 366 GLU GLU A . n A 1 187 ASN 187 367 367 ASN ASN A . n A 1 188 PRO 188 368 368 PRO PRO A . n A 1 189 ASP 189 369 369 ASP ASP A . n A 1 190 LEU 190 370 370 LEU LEU A . n A 1 191 GLU 191 371 371 GLU GLU A . n A 1 192 LYS 192 372 372 LYS LYS A . n A 1 193 PHE 193 373 373 PHE PHE A . n A 1 194 PRO 194 374 374 PRO PRO A . n A 1 195 LYS 195 375 375 LYS LYS A . n A 1 196 PHE 196 376 376 PHE PHE A . n A 1 197 ALA 197 377 377 ALA ALA A . n A 1 198 LYS 198 378 378 LYS LYS A . n A 1 199 ALA 199 379 379 ALA ALA A . n A 1 200 PRO 200 380 380 PRO PRO A . n A 1 201 PHE 201 381 381 PHE PHE A . n A 1 202 LEU 202 382 382 LEU LEU A . n A 1 203 SER 203 383 383 SER SER A . n A 1 204 CYS 204 384 384 CYS CYS A . n A 1 205 ILE 205 385 385 ILE ILE A . n A 1 206 LEU 206 386 386 LEU LEU A . n A 1 207 SER 207 387 387 SER SER A . n A 1 208 PRO 208 388 388 PRO PRO A . n A 1 209 GLY 209 389 389 GLY GLY A . n A 1 210 GLU 210 390 390 GLU GLU A . n A 1 211 ILE 211 391 391 ILE ILE A . n A 1 212 LEU 212 392 392 LEU LEU A . n A 1 213 PHE 213 393 393 PHE PHE A . n A 1 214 ILE 214 394 394 ILE ILE A . n A 1 215 PRO 215 395 395 PRO PRO A . n A 1 216 VAL 216 396 396 VAL VAL A . n A 1 217 LYS 217 397 397 LYS LYS A . n A 1 218 TYR 218 398 398 TYR TYR A . n A 1 219 TRP 219 399 399 TRP TRP A . n A 1 220 HIS 220 400 400 HIS HIS A . n A 1 221 TYR 221 401 401 TYR TYR A . n A 1 222 VAL 222 402 402 VAL VAL A . n A 1 223 ARG 223 403 403 ARG ARG A . n A 1 224 ALA 224 404 404 ALA ALA A . n A 1 225 LEU 225 405 405 LEU LEU A . n A 1 226 ASP 226 406 406 ASP ASP A . n A 1 227 LEU 227 407 407 LEU LEU A . n A 1 228 SER 228 408 408 SER SER A . n A 1 229 PHE 229 409 409 PHE PHE A . n A 1 230 SER 230 410 410 SER SER A . n A 1 231 VAL 231 411 411 VAL VAL A . n A 1 232 SER 232 412 412 SER SER A . n A 1 233 PHE 233 413 413 PHE PHE A . n A 1 234 TRP 234 414 414 TRP TRP A . n A 1 235 TRP 235 415 415 TRP TRP A . n A 1 236 SER 236 416 416 SER SER A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 501 501 ZN ZN A . C 3 NMM 1 502 1 NMM 2MR A . D 4 HOH 1 601 601 HOH HOH A . D 4 HOH 2 602 602 HOH HOH A . D 4 HOH 3 603 603 HOH HOH A . D 4 HOH 4 604 604 HOH HOH A . D 4 HOH 5 605 605 HOH HOH A . D 4 HOH 6 606 606 HOH HOH A . D 4 HOH 7 607 607 HOH HOH A . D 4 HOH 8 608 608 HOH HOH A . D 4 HOH 9 609 609 HOH HOH A . D 4 HOH 10 610 610 HOH HOH A . D 4 HOH 11 611 611 HOH HOH A . D 4 HOH 12 612 612 HOH HOH A . D 4 HOH 13 613 613 HOH HOH A . D 4 HOH 14 614 614 HOH HOH A . D 4 HOH 15 615 615 HOH HOH A . D 4 HOH 16 616 616 HOH HOH A . D 4 HOH 17 617 617 HOH HOH A . D 4 HOH 18 618 618 HOH HOH A . D 4 HOH 19 619 619 HOH HOH A . D 4 HOH 20 620 620 HOH HOH A . D 4 HOH 21 621 621 HOH HOH A . D 4 HOH 22 622 622 HOH HOH A . D 4 HOH 23 623 623 HOH HOH A . D 4 HOH 24 624 624 HOH HOH A . D 4 HOH 25 625 625 HOH HOH A . D 4 HOH 26 626 626 HOH HOH A . D 4 HOH 27 627 627 HOH HOH A . D 4 HOH 28 628 628 HOH HOH A . D 4 HOH 29 629 629 HOH HOH A . D 4 HOH 30 630 630 HOH HOH A . D 4 HOH 31 631 631 HOH HOH A . D 4 HOH 32 632 632 HOH HOH A . D 4 HOH 33 633 633 HOH HOH A . D 4 HOH 34 634 634 HOH HOH A . D 4 HOH 35 635 635 HOH HOH A . D 4 HOH 36 636 636 HOH HOH A . D 4 HOH 37 637 637 HOH HOH A . D 4 HOH 38 638 638 HOH HOH A . D 4 HOH 39 639 639 HOH HOH A . D 4 HOH 40 640 640 HOH HOH A . D 4 HOH 41 641 641 HOH HOH A . D 4 HOH 42 642 642 HOH HOH A . D 4 HOH 43 643 643 HOH HOH A . D 4 HOH 44 644 644 HOH HOH A . D 4 HOH 45 645 645 HOH HOH A . D 4 HOH 46 646 646 HOH HOH A . D 4 HOH 47 647 647 HOH HOH A . D 4 HOH 48 648 648 HOH HOH A . D 4 HOH 49 649 649 HOH HOH A . D 4 HOH 50 650 650 HOH HOH A . D 4 HOH 51 651 651 HOH HOH A . D 4 HOH 52 652 652 HOH HOH A . D 4 HOH 53 653 653 HOH HOH A . D 4 HOH 54 654 654 HOH HOH A . D 4 HOH 55 655 655 HOH HOH A . D 4 HOH 56 656 656 HOH HOH A . D 4 HOH 57 657 657 HOH HOH A . D 4 HOH 58 658 658 HOH HOH A . D 4 HOH 59 659 659 HOH HOH A . D 4 HOH 60 660 660 HOH HOH A . D 4 HOH 61 661 661 HOH HOH A . D 4 HOH 62 662 662 HOH HOH A . D 4 HOH 63 663 663 HOH HOH A . D 4 HOH 64 664 664 HOH HOH A . D 4 HOH 65 665 665 HOH HOH A . D 4 HOH 66 666 666 HOH HOH A . D 4 HOH 67 667 667 HOH HOH A . D 4 HOH 68 668 668 HOH HOH A . D 4 HOH 69 669 669 HOH HOH A . D 4 HOH 70 670 670 HOH HOH A . D 4 HOH 71 671 671 HOH HOH A . D 4 HOH 72 672 672 HOH HOH A . D 4 HOH 73 673 673 HOH HOH A . D 4 HOH 74 674 101 HOH HOH A . D 4 HOH 75 675 674 HOH HOH A . D 4 HOH 76 676 675 HOH HOH A . D 4 HOH 77 677 676 HOH HOH A . D 4 HOH 78 678 677 HOH HOH A . D 4 HOH 79 679 678 HOH HOH A . D 4 HOH 80 680 679 HOH HOH A . D 4 HOH 81 681 680 HOH HOH A . D 4 HOH 82 682 681 HOH HOH A . D 4 HOH 83 683 682 HOH HOH A . D 4 HOH 84 684 683 HOH HOH A . D 4 HOH 85 685 102 HOH HOH A . D 4 HOH 86 686 684 HOH HOH A . D 4 HOH 87 687 685 HOH HOH A . D 4 HOH 88 688 686 HOH HOH A . D 4 HOH 89 689 687 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 141 ? A HIS 321 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 OD2 ? A ASP 143 ? A ASP 323 ? 1_555 110.6 ? 2 NE2 ? A HIS 141 ? A HIS 321 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 220 ? A HIS 400 ? 1_555 90.4 ? 3 OD2 ? A ASP 143 ? A ASP 323 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 NE2 ? A HIS 220 ? A HIS 400 ? 1_555 96.5 ? 4 NE2 ? A HIS 141 ? A HIS 321 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 O ? C NMM . ? A NMM 502 ? 1_555 65.6 ? 5 OD2 ? A ASP 143 ? A ASP 323 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 O ? C NMM . ? A NMM 502 ? 1_555 97.7 ? 6 NE2 ? A HIS 220 ? A HIS 400 ? 1_555 ZN ? B ZN . ? A ZN 501 ? 1_555 O ? C NMM . ? A NMM 502 ? 1_555 155.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-02-28 2 'Structure model' 1 1 2018-03-07 3 'Structure model' 1 2 2023-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' pdbx_initial_refinement_model 6 3 'Structure model' pdbx_unobs_or_zero_occ_atoms # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.pdbx_database_id_PubMed' 5 2 'Structure model' '_citation.title' 6 3 'Structure model' '_database_2.pdbx_DOI' 7 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.10.1_2155: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A LYS 372 ? ? O A HOH 601 ? ? 1.81 2 1 O A ASP 323 ? ? O A HOH 602 ? ? 1.91 3 1 C A ASP 323 ? ? O A HOH 602 ? ? 1.94 4 1 O A HOH 649 ? ? O A HOH 676 ? ? 1.99 5 1 NH1 A ARG 339 ? ? O A HOH 603 ? ? 2.12 6 1 NE2 A HIS 194 ? ? O A HOH 604 ? ? 2.13 7 1 OD1 A ASP 245 ? ? O A HOH 605 ? ? 2.15 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 660 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 679 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_555 _pdbx_validate_symm_contact.dist 1.57 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C A SER 416 ? ? O A SER 416 ? ? 1.381 1.229 0.152 0.019 N 2 1 C A SER 416 ? ? OXT A SER 416 ? ? 1.464 1.229 0.235 0.019 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 339 ? ? CZ A ARG 339 ? ? NH1 A ARG 339 ? ? 117.21 120.30 -3.09 0.50 N 2 1 CA A SER 416 ? ? C A SER 416 ? ? O A SER 416 ? ? 103.95 120.10 -16.15 2.10 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 189 ? ? 30.52 65.14 2 1 ILE A 263 ? ? -124.62 -56.14 3 1 GLU A 266 ? ? 20.70 70.29 4 1 ASP A 299 ? ? -91.88 42.43 5 1 HIS A 355 ? ? 93.27 -52.35 6 1 ASN A 367 ? ? -153.44 69.31 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 189 ? CG ? A ARG 9 CG 2 1 Y 1 A ARG 189 ? CD ? A ARG 9 CD 3 1 Y 1 A ARG 189 ? NE ? A ARG 9 NE 4 1 Y 1 A ARG 189 ? CZ ? A ARG 9 CZ 5 1 Y 1 A ARG 189 ? NH1 ? A ARG 9 NH1 6 1 Y 1 A ARG 189 ? NH2 ? A ARG 9 NH2 7 1 Y 1 A GLN 193 ? CB ? A GLN 13 CB 8 1 Y 1 A GLN 193 ? CG ? A GLN 13 CG 9 1 Y 1 A GLN 193 ? CD ? A GLN 13 CD 10 1 Y 1 A GLN 193 ? OE1 ? A GLN 13 OE1 11 1 Y 1 A GLN 193 ? NE2 ? A GLN 13 NE2 12 1 Y 1 A ARG 196 ? CZ ? A ARG 16 CZ 13 1 Y 1 A ARG 196 ? NH1 ? A ARG 16 NH1 14 1 Y 1 A ARG 196 ? NH2 ? A ARG 16 NH2 15 1 Y 1 A GLN 198 ? CG ? A GLN 18 CG 16 1 Y 1 A GLN 198 ? CD ? A GLN 18 CD 17 1 Y 1 A GLN 198 ? OE1 ? A GLN 18 OE1 18 1 Y 1 A GLN 198 ? NE2 ? A GLN 18 NE2 19 1 Y 0 A ARG 204 ? CZ ? A ARG 24 CZ 20 1 Y 0 A CYS 217 ? C ? A CYS 37 C 21 1 Y 1 A GLN 219 ? CB ? A GLN 39 CB 22 1 Y 1 A GLN 219 ? CG ? A GLN 39 CG 23 1 Y 1 A GLN 219 ? CD ? A GLN 39 CD 24 1 Y 1 A GLN 219 ? OE1 ? A GLN 39 OE1 25 1 Y 1 A GLN 219 ? NE2 ? A GLN 39 NE2 26 1 Y 1 A GLU 224 ? CG ? A GLU 44 CG 27 1 Y 1 A GLU 224 ? CD ? A GLU 44 CD 28 1 Y 1 A GLU 224 ? OE1 ? A GLU 44 OE1 29 1 Y 1 A GLU 224 ? OE2 ? A GLU 44 OE2 30 1 Y 1 A GLU 228 ? CG ? A GLU 48 CG 31 1 Y 1 A GLU 228 ? CD ? A GLU 48 CD 32 1 Y 1 A GLU 228 ? OE1 ? A GLU 48 OE1 33 1 Y 1 A GLU 228 ? OE2 ? A GLU 48 OE2 34 1 Y 0 A GLU 238 ? CD ? A GLU 58 CD 35 1 Y 1 A SER 241 ? CB ? A SER 61 CB 36 1 Y 1 A SER 241 ? OG ? A SER 61 OG 37 1 Y 0 A ASP 245 ? CA ? A ASP 65 CA 38 1 Y 1 A GLU 246 ? CG ? A GLU 66 CG 39 1 Y 1 A GLU 246 ? CD ? A GLU 66 CD 40 1 Y 1 A GLU 246 ? OE1 ? A GLU 66 OE1 41 1 Y 1 A GLU 246 ? OE2 ? A GLU 66 OE2 42 1 Y 1 A GLU 247 ? CB ? A GLU 67 CB 43 1 Y 1 A GLU 247 ? CG ? A GLU 67 CG 44 1 Y 1 A GLU 247 ? CD ? A GLU 67 CD 45 1 Y 1 A GLU 247 ? OE1 ? A GLU 67 OE1 46 1 Y 1 A GLU 247 ? OE2 ? A GLU 67 OE2 47 1 Y 1 A GLN 250 ? CG ? A GLN 70 CG 48 1 Y 1 A GLN 250 ? CD ? A GLN 70 CD 49 1 Y 1 A GLN 250 ? OE1 ? A GLN 70 OE1 50 1 Y 1 A GLN 250 ? NE2 ? A GLN 70 NE2 51 1 Y 1 A GLU 266 ? CG ? A GLU 86 CG 52 1 Y 1 A GLU 266 ? CD ? A GLU 86 CD 53 1 Y 1 A GLU 266 ? OE1 ? A GLU 86 OE1 54 1 Y 1 A GLU 266 ? OE2 ? A GLU 86 OE2 55 1 Y 1 A ARG 268 ? CG ? A ARG 88 CG 56 1 Y 1 A ARG 268 ? CD ? A ARG 88 CD 57 1 Y 1 A ARG 268 ? NE ? A ARG 88 NE 58 1 Y 1 A ARG 268 ? CZ ? A ARG 88 CZ 59 1 Y 1 A ARG 268 ? NH1 ? A ARG 88 NH1 60 1 Y 1 A ARG 268 ? NH2 ? A ARG 88 NH2 61 1 Y 1 A GLU 284 ? CG ? A GLU 104 CG 62 1 Y 1 A GLU 284 ? CD ? A GLU 104 CD 63 1 Y 1 A GLU 284 ? OE1 ? A GLU 104 OE1 64 1 Y 1 A GLU 284 ? OE2 ? A GLU 104 OE2 65 1 Y 1 A LYS 286 ? CG ? A LYS 106 CG 66 1 Y 1 A LYS 286 ? CD ? A LYS 106 CD 67 1 Y 1 A LYS 286 ? CE ? A LYS 106 CE 68 1 Y 1 A LYS 286 ? NZ ? A LYS 106 NZ 69 1 Y 1 A GLN 287 ? CB ? A GLN 107 CB 70 1 Y 1 A GLN 287 ? CG ? A GLN 107 CG 71 1 Y 1 A GLN 287 ? CD ? A GLN 107 CD 72 1 Y 1 A GLN 287 ? OE1 ? A GLN 107 OE1 73 1 Y 1 A GLN 287 ? NE2 ? A GLN 107 NE2 74 1 Y 1 A ASP 293 ? CG ? A ASP 113 CG 75 1 Y 1 A ASP 293 ? OD1 ? A ASP 113 OD1 76 1 Y 1 A ASP 293 ? OD2 ? A ASP 113 OD2 77 1 Y 1 A SER 296 ? OG ? A SER 116 OG 78 1 Y 1 A ASP 299 ? CG ? A ASP 119 CG 79 1 Y 1 A ASP 299 ? OD1 ? A ASP 119 OD1 80 1 Y 1 A ASP 299 ? OD2 ? A ASP 119 OD2 81 1 Y 1 A GLU 301 ? CB ? A GLU 121 CB 82 1 Y 1 A GLU 301 ? CG ? A GLU 121 CG 83 1 Y 1 A GLU 301 ? CD ? A GLU 121 CD 84 1 Y 1 A GLU 301 ? OE1 ? A GLU 121 OE1 85 1 Y 1 A GLU 301 ? OE2 ? A GLU 121 OE2 86 1 Y 0 A GLU 302 ? OE1 ? A GLU 122 OE1 87 1 Y 0 A GLU 302 ? OE2 ? A GLU 122 OE2 88 1 Y 1 A GLU 303 ? CB ? A GLU 123 CB 89 1 Y 1 A GLU 303 ? CG ? A GLU 123 CG 90 1 Y 1 A GLU 303 ? CD ? A GLU 123 CD 91 1 Y 1 A GLU 303 ? OE1 ? A GLU 123 OE1 92 1 Y 1 A GLU 303 ? OE2 ? A GLU 123 OE2 93 1 Y 1 A GLU 304 ? CG ? A GLU 124 CG 94 1 Y 1 A GLU 304 ? CD ? A GLU 124 CD 95 1 Y 1 A GLU 304 ? OE1 ? A GLU 124 OE1 96 1 Y 1 A GLU 304 ? OE2 ? A GLU 124 OE2 97 1 Y 1 A MET 333 ? CG ? A MET 153 CG 98 1 Y 1 A MET 333 ? SD ? A MET 153 SD 99 1 Y 1 A MET 333 ? CE ? A MET 153 CE 100 1 Y 0 A GLN 344 ? CD ? A GLN 164 CD 101 1 Y 1 A ASP 353 ? CB ? A ASP 173 CB 102 1 Y 1 A ASP 353 ? CG ? A ASP 173 CG 103 1 Y 1 A ASP 353 ? OD1 ? A ASP 173 OD1 104 1 Y 1 A ASP 353 ? OD2 ? A ASP 173 OD2 105 1 Y 1 A HIS 355 ? CB ? A HIS 175 CB 106 1 Y 1 A HIS 355 ? CG ? A HIS 175 CG 107 1 Y 1 A HIS 355 ? ND1 ? A HIS 175 ND1 108 1 Y 1 A HIS 355 ? CD2 ? A HIS 175 CD2 109 1 Y 1 A HIS 355 ? CE1 ? A HIS 175 CE1 110 1 Y 1 A HIS 355 ? NE2 ? A HIS 175 NE2 111 1 Y 0 A HIS 355 ? C ? A HIS 175 C 112 1 Y 1 A LEU 356 ? CG ? A LEU 176 CG 113 1 Y 1 A LEU 356 ? CD1 ? A LEU 176 CD1 114 1 Y 1 A LEU 356 ? CD2 ? A LEU 176 CD2 115 1 Y 1 A HIS 358 ? CG ? A HIS 178 CG 116 1 Y 1 A HIS 358 ? ND1 ? A HIS 178 ND1 117 1 Y 1 A HIS 358 ? CD2 ? A HIS 178 CD2 118 1 Y 1 A HIS 358 ? CE1 ? A HIS 178 CE1 119 1 Y 1 A HIS 358 ? NE2 ? A HIS 178 NE2 120 1 Y 1 A ASP 369 ? CG ? A ASP 189 CG 121 1 Y 1 A ASP 369 ? OD1 ? A ASP 189 OD1 122 1 Y 1 A ASP 369 ? OD2 ? A ASP 189 OD2 123 1 Y 1 A GLU 371 ? CG ? A GLU 191 CG 124 1 Y 1 A GLU 371 ? CD ? A GLU 191 CD 125 1 Y 1 A GLU 371 ? OE1 ? A GLU 191 OE1 126 1 Y 1 A GLU 371 ? OE2 ? A GLU 191 OE2 127 1 Y 1 A LYS 378 ? CB ? A LYS 198 CB 128 1 Y 1 A LYS 378 ? CG ? A LYS 198 CG 129 1 Y 1 A LYS 378 ? CD ? A LYS 198 CD 130 1 Y 1 A LYS 378 ? CE ? A LYS 198 CE 131 1 Y 1 A LYS 378 ? NZ ? A LYS 198 NZ 132 1 Y 0 A LEU 407 ? CD1 ? A LEU 227 CD1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 NMM CAA C N N 250 NMM NH2 N N N 251 NMM CZ C N N 252 NMM NH1 N N N 253 NMM NE N N N 254 NMM CD C N N 255 NMM CG C N N 256 NMM CB C N N 257 NMM CA C N S 258 NMM C C N N 259 NMM O O N N 260 NMM OXT O N N 261 NMM N N N N 262 NMM HAA1 H N N 263 NMM HAA2 H N N 264 NMM HAA3 H N N 265 NMM HH2 H N N 266 NMM HH1 H N N 267 NMM HE H N N 268 NMM HD3 H N N 269 NMM HD2 H N N 270 NMM HG3 H N N 271 NMM HG2 H N N 272 NMM HB3 H N N 273 NMM HB2 H N N 274 NMM HA H N N 275 NMM HXT H N N 276 NMM H H N N 277 NMM H2 H N N 278 PHE N N N N 279 PHE CA C N S 280 PHE C C N N 281 PHE O O N N 282 PHE CB C N N 283 PHE CG C Y N 284 PHE CD1 C Y N 285 PHE CD2 C Y N 286 PHE CE1 C Y N 287 PHE CE2 C Y N 288 PHE CZ C Y N 289 PHE OXT O N N 290 PHE H H N N 291 PHE H2 H N N 292 PHE HA H N N 293 PHE HB2 H N N 294 PHE HB3 H N N 295 PHE HD1 H N N 296 PHE HD2 H N N 297 PHE HE1 H N N 298 PHE HE2 H N N 299 PHE HZ H N N 300 PHE HXT H N N 301 PRO N N N N 302 PRO CA C N S 303 PRO C C N N 304 PRO O O N N 305 PRO CB C N N 306 PRO CG C N N 307 PRO CD C N N 308 PRO OXT O N N 309 PRO H H N N 310 PRO HA H N N 311 PRO HB2 H N N 312 PRO HB3 H N N 313 PRO HG2 H N N 314 PRO HG3 H N N 315 PRO HD2 H N N 316 PRO HD3 H N N 317 PRO HXT H N N 318 SER N N N N 319 SER CA C N S 320 SER C C N N 321 SER O O N N 322 SER CB C N N 323 SER OG O N N 324 SER OXT O N N 325 SER H H N N 326 SER H2 H N N 327 SER HA H N N 328 SER HB2 H N N 329 SER HB3 H N N 330 SER HG H N N 331 SER HXT H N N 332 THR N N N N 333 THR CA C N S 334 THR C C N N 335 THR O O N N 336 THR CB C N R 337 THR OG1 O N N 338 THR CG2 C N N 339 THR OXT O N N 340 THR H H N N 341 THR H2 H N N 342 THR HA H N N 343 THR HB H N N 344 THR HG1 H N N 345 THR HG21 H N N 346 THR HG22 H N N 347 THR HG23 H N N 348 THR HXT H N N 349 TRP N N N N 350 TRP CA C N S 351 TRP C C N N 352 TRP O O N N 353 TRP CB C N N 354 TRP CG C Y N 355 TRP CD1 C Y N 356 TRP CD2 C Y N 357 TRP NE1 N Y N 358 TRP CE2 C Y N 359 TRP CE3 C Y N 360 TRP CZ2 C Y N 361 TRP CZ3 C Y N 362 TRP CH2 C Y N 363 TRP OXT O N N 364 TRP H H N N 365 TRP H2 H N N 366 TRP HA H N N 367 TRP HB2 H N N 368 TRP HB3 H N N 369 TRP HD1 H N N 370 TRP HE1 H N N 371 TRP HE3 H N N 372 TRP HZ2 H N N 373 TRP HZ3 H N N 374 TRP HH2 H N N 375 TRP HXT H N N 376 TYR N N N N 377 TYR CA C N S 378 TYR C C N N 379 TYR O O N N 380 TYR CB C N N 381 TYR CG C Y N 382 TYR CD1 C Y N 383 TYR CD2 C Y N 384 TYR CE1 C Y N 385 TYR CE2 C Y N 386 TYR CZ C Y N 387 TYR OH O N N 388 TYR OXT O N N 389 TYR H H N N 390 TYR H2 H N N 391 TYR HA H N N 392 TYR HB2 H N N 393 TYR HB3 H N N 394 TYR HD1 H N N 395 TYR HD2 H N N 396 TYR HE1 H N N 397 TYR HE2 H N N 398 TYR HH H N N 399 TYR HXT H N N 400 VAL N N N N 401 VAL CA C N S 402 VAL C C N N 403 VAL O O N N 404 VAL CB C N N 405 VAL CG1 C N N 406 VAL CG2 C N N 407 VAL OXT O N N 408 VAL H H N N 409 VAL H2 H N N 410 VAL HA H N N 411 VAL HB H N N 412 VAL HG11 H N N 413 VAL HG12 H N N 414 VAL HG13 H N N 415 VAL HG21 H N N 416 VAL HG22 H N N 417 VAL HG23 H N N 418 VAL HXT H N N 419 ZN ZN ZN N N 420 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 NMM CAA NH2 sing N N 237 NMM CAA HAA1 sing N N 238 NMM CAA HAA2 sing N N 239 NMM CAA HAA3 sing N N 240 NMM NH2 CZ sing N N 241 NMM NH2 HH2 sing N N 242 NMM CZ NH1 doub N N 243 NMM CZ NE sing N N 244 NMM NH1 HH1 sing N N 245 NMM NE CD sing N N 246 NMM NE HE sing N N 247 NMM CD CG sing N N 248 NMM CD HD3 sing N N 249 NMM CD HD2 sing N N 250 NMM CG CB sing N N 251 NMM CG HG3 sing N N 252 NMM CG HG2 sing N N 253 NMM CB CA sing N N 254 NMM CB HB3 sing N N 255 NMM CB HB2 sing N N 256 NMM CA C sing N N 257 NMM CA N sing N N 258 NMM CA HA sing N N 259 NMM C O doub N N 260 NMM C OXT sing N N 261 NMM OXT HXT sing N N 262 NMM N H sing N N 263 NMM N H2 sing N N 264 PHE N CA sing N N 265 PHE N H sing N N 266 PHE N H2 sing N N 267 PHE CA C sing N N 268 PHE CA CB sing N N 269 PHE CA HA sing N N 270 PHE C O doub N N 271 PHE C OXT sing N N 272 PHE CB CG sing N N 273 PHE CB HB2 sing N N 274 PHE CB HB3 sing N N 275 PHE CG CD1 doub Y N 276 PHE CG CD2 sing Y N 277 PHE CD1 CE1 sing Y N 278 PHE CD1 HD1 sing N N 279 PHE CD2 CE2 doub Y N 280 PHE CD2 HD2 sing N N 281 PHE CE1 CZ doub Y N 282 PHE CE1 HE1 sing N N 283 PHE CE2 CZ sing Y N 284 PHE CE2 HE2 sing N N 285 PHE CZ HZ sing N N 286 PHE OXT HXT sing N N 287 PRO N CA sing N N 288 PRO N CD sing N N 289 PRO N H sing N N 290 PRO CA C sing N N 291 PRO CA CB sing N N 292 PRO CA HA sing N N 293 PRO C O doub N N 294 PRO C OXT sing N N 295 PRO CB CG sing N N 296 PRO CB HB2 sing N N 297 PRO CB HB3 sing N N 298 PRO CG CD sing N N 299 PRO CG HG2 sing N N 300 PRO CG HG3 sing N N 301 PRO CD HD2 sing N N 302 PRO CD HD3 sing N N 303 PRO OXT HXT sing N N 304 SER N CA sing N N 305 SER N H sing N N 306 SER N H2 sing N N 307 SER CA C sing N N 308 SER CA CB sing N N 309 SER CA HA sing N N 310 SER C O doub N N 311 SER C OXT sing N N 312 SER CB OG sing N N 313 SER CB HB2 sing N N 314 SER CB HB3 sing N N 315 SER OG HG sing N N 316 SER OXT HXT sing N N 317 THR N CA sing N N 318 THR N H sing N N 319 THR N H2 sing N N 320 THR CA C sing N N 321 THR CA CB sing N N 322 THR CA HA sing N N 323 THR C O doub N N 324 THR C OXT sing N N 325 THR CB OG1 sing N N 326 THR CB CG2 sing N N 327 THR CB HB sing N N 328 THR OG1 HG1 sing N N 329 THR CG2 HG21 sing N N 330 THR CG2 HG22 sing N N 331 THR CG2 HG23 sing N N 332 THR OXT HXT sing N N 333 TRP N CA sing N N 334 TRP N H sing N N 335 TRP N H2 sing N N 336 TRP CA C sing N N 337 TRP CA CB sing N N 338 TRP CA HA sing N N 339 TRP C O doub N N 340 TRP C OXT sing N N 341 TRP CB CG sing N N 342 TRP CB HB2 sing N N 343 TRP CB HB3 sing N N 344 TRP CG CD1 doub Y N 345 TRP CG CD2 sing Y N 346 TRP CD1 NE1 sing Y N 347 TRP CD1 HD1 sing N N 348 TRP CD2 CE2 doub Y N 349 TRP CD2 CE3 sing Y N 350 TRP NE1 CE2 sing Y N 351 TRP NE1 HE1 sing N N 352 TRP CE2 CZ2 sing Y N 353 TRP CE3 CZ3 doub Y N 354 TRP CE3 HE3 sing N N 355 TRP CZ2 CH2 doub Y N 356 TRP CZ2 HZ2 sing N N 357 TRP CZ3 CH2 sing Y N 358 TRP CZ3 HZ3 sing N N 359 TRP CH2 HH2 sing N N 360 TRP OXT HXT sing N N 361 TYR N CA sing N N 362 TYR N H sing N N 363 TYR N H2 sing N N 364 TYR CA C sing N N 365 TYR CA CB sing N N 366 TYR CA HA sing N N 367 TYR C O doub N N 368 TYR C OXT sing N N 369 TYR CB CG sing N N 370 TYR CB HB2 sing N N 371 TYR CB HB3 sing N N 372 TYR CG CD1 doub Y N 373 TYR CG CD2 sing Y N 374 TYR CD1 CE1 sing Y N 375 TYR CD1 HD1 sing N N 376 TYR CD2 CE2 doub Y N 377 TYR CD2 HD2 sing N N 378 TYR CE1 CZ doub Y N 379 TYR CE1 HE1 sing N N 380 TYR CE2 CZ sing Y N 381 TYR CE2 HE2 sing N N 382 TYR CZ OH sing N N 383 TYR OH HH sing N N 384 TYR OXT HXT sing N N 385 VAL N CA sing N N 386 VAL N H sing N N 387 VAL N H2 sing N N 388 VAL CA C sing N N 389 VAL CA CB sing N N 390 VAL CA HA sing N N 391 VAL C O doub N N 392 VAL C OXT sing N N 393 VAL CB CG1 sing N N 394 VAL CB CG2 sing N N 395 VAL CB HB sing N N 396 VAL CG1 HG11 sing N N 397 VAL CG1 HG12 sing N N 398 VAL CG1 HG13 sing N N 399 VAL CG2 HG21 sing N N 400 VAL CG2 HG22 sing N N 401 VAL CG2 HG23 sing N N 402 VAL OXT HXT sing N N 403 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 '(2S)-2-amino-5-[(N-methylcarbamimidoyl)amino]pentanoic acid' NMM 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5FBJ _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #