data_6B35 # _entry.id 6B35 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6B35 pdb_00006b35 10.2210/pdb6b35/pdb WWPDB D_1000230192 ? ? BMRB 30347 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 6B34 unspecified BMRB . 30346 unspecified BMRB 'NMR ensemble of Tyrocidine A analogue AC3.28' 30347 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6B35 _pdbx_database_status.recvd_initial_deposition_date 2017-09-20 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Cameron, A.J.' 1 ? 'Ewdards, P.J.B.' 2 ? 'Harjes, E.' 3 ? 'Sarojini, V.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Med. Chem.' _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 1520-4804 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 60 _citation.language ? _citation.page_first 9565 _citation.page_last 9574 _citation.title 'Tyrocidine A Analogues Bearing the Planar d-Phe-2-Abz Turn Motif: How Conformation Impacts Bioactivity.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.7b00953 _citation.pdbx_database_id_PubMed 29140694 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cameron, A.J.' 1 ? primary 'Edwards, P.J.B.' 2 ? primary 'Harjes, E.' 3 ? primary 'Sarojini, V.' 4 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'Tyrocidine A analogue D-PHE-BE2-PHE-D-PHE-ASN-LYS-TYR-VAL-ORN-LEU' _entity.formula_weight 1311.548 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DPN)(BE2)F(DPN)NKYV(ORN)L' _entity_poly.pdbx_seq_one_letter_code_can FXFFNKYVAL _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DPN n 1 2 BE2 n 1 3 PHE n 1 4 DPN n 1 5 ASN n 1 6 LYS n 1 7 TYR n 1 8 VAL n 1 9 ORN n 1 10 LEU n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 10 _pdbx_entity_src_syn.organism_scientific 'Brevibacillus brevis' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 1393 _pdbx_entity_src_syn.details 'Synthetic analogue of tyrocidine A. Sequence is altered at 2 positions relative to natural product.' # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6B35 _struct_ref.pdbx_db_accession 6B35 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6B35 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 10 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6B35 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 10 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 BE2 'L-peptide linking' . '2-AMINOBENZOIC ACID' ? 'C7 H7 N O2' 137.136 DPN 'D-peptide linking' . D-PHENYLALANINE ? 'C9 H11 N O2' 165.189 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 ORN 'L-peptide linking' n L-ornithine ? 'C5 H12 N2 O2' 132.161 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-15N HSQC' 1 isotropic 2 1 1 '2D 1H-1H TOCSY' 1 isotropic 3 1 1 '2D 1H-1H COSY' 1 isotropic 4 1 1 '2D 1H-1H NOESY' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.label conditions_1 _pdbx_nmr_exptl_sample_conditions.pH_err 2 _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.8 mM None D-PHE-ABZ-PHE-D-PHE-ASN-LYS-TYR-VAL-ORN-LEU, 50% H20 /50% MeCN' _pdbx_nmr_sample_details.solvent_system '50% H20 /50% MeCN' _pdbx_nmr_sample_details.label AC3.28 _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 700 _pdbx_nmr_spectrometer.details ? # _pdbx_nmr_refine.details ? _pdbx_nmr_refine.entry_id 6B35 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 6B35 _pdbx_nmr_ensemble.conformers_calculated_total_number 10 _pdbx_nmr_ensemble.conformers_submitted_total_number 8 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with acceptable covalent geometry' # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 6B35 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement YASARA ? E.KRIGER 1 'structure solution' ANALYSIS ? ? 2 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6B35 _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6B35 _struct.title 'NMR ensemble of Tyrocidine A analogue AC3.28' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6B35 _struct_keywords.text 'Tyrocidine A Antimicrobial peptide AMP Cyclic peptide 2-aminobenzoic acid 2-Abz Anthranilic acid, ANTIMICROBIAL PROTEIN' _struct_keywords.pdbx_keywords 'ANTIMICROBIAL PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DPN 1 C ? ? ? 1_555 A BE2 2 N ? ? A DPN 1 A BE2 2 1_555 ? ? ? ? ? ? ? 1.396 ? ? covale2 covale both ? A DPN 1 N ? ? ? 1_555 A LEU 10 C ? ? A DPN 1 A LEU 10 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale3 covale both ? A BE2 2 C ? ? ? 1_555 A PHE 3 N ? ? A BE2 2 A PHE 3 1_555 ? ? ? ? ? ? ? 1.383 ? ? covale4 covale both ? A PHE 3 C ? ? ? 1_555 A DPN 4 N ? ? A PHE 3 A DPN 4 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale5 covale both ? A DPN 4 C ? ? ? 1_555 A ASN 5 N ? ? A DPN 4 A ASN 5 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale6 covale both ? A VAL 8 C ? ? ? 1_555 A ORN 9 N ? ? A VAL 8 A ORN 9 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale7 covale both ? A ORN 9 C ? ? ? 1_555 A LEU 10 N ? ? A ORN 9 A LEU 10 1_555 ? ? ? ? ? ? ? 1.338 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 6B35 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DPN 1 1 1 DPN DPN A . n A 1 2 BE2 2 2 2 BE2 BE2 A . n A 1 3 PHE 3 3 3 PHE PHE A . n A 1 4 DPN 4 4 4 DPN DPN A . n A 1 5 ASN 5 5 5 ASN ASN A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 TYR 7 7 7 TYR TYR A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 ORN 9 9 9 ORN ORN A . n A 1 10 LEU 10 10 10 LEU LEU A . n # _pdbx_molecule_features.prd_id PRD_002290 _pdbx_molecule_features.name 'Tyrocidine A analogue (DPN)(BE2)F(DPN)NKYV(ORN)L' _pdbx_molecule_features.type 'Cyclic peptide' _pdbx_molecule_features.class Antibiotic _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_002290 _pdbx_molecule.asym_id A # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 220 ? 1 MORE 1 ? 1 'SSA (A^2)' 1430 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-12-06 2 'Structure model' 1 1 2017-12-27 3 'Structure model' 2 0 2020-08-12 4 'Structure model' 2 1 2023-06-14 5 'Structure model' 3 0 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Structure summary' 6 4 'Structure model' 'Database references' 7 4 'Structure model' Other 8 5 'Structure model' 'Atomic model' 9 5 'Structure model' 'Data collection' 10 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' atom_site 3 3 'Structure model' pdbx_molecule_features 4 3 'Structure model' pdbx_nmr_spectrometer 5 3 'Structure model' struct_conn 6 4 'Structure model' database_2 7 4 'Structure model' pdbx_database_status 8 5 'Structure model' atom_site 9 5 'Structure model' chem_comp_atom 10 5 'Structure model' chem_comp_bond 11 5 'Structure model' pdbx_validate_rmsd_angle 12 5 'Structure model' pdbx_validate_torsion 13 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 3 'Structure model' '_atom_site.auth_atom_id' 5 3 'Structure model' '_atom_site.label_atom_id' 6 3 'Structure model' '_pdbx_nmr_spectrometer.model' 7 3 'Structure model' '_struct_conn.pdbx_dist_value' 8 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 9 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 10 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 11 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 12 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 13 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 14 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 15 4 'Structure model' '_database_2.pdbx_DOI' 16 4 'Structure model' '_database_2.pdbx_database_accession' 17 4 'Structure model' '_pdbx_database_status.status_code_nmr_data' 18 5 'Structure model' '_atom_site.auth_atom_id' 19 5 'Structure model' '_atom_site.label_atom_id' 20 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 21 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' # _pdbx_entry_details.entry_id 6B35 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ;Tyrocidine kills bacteria by interacting with their cytoplasmic membrane and causing leakage of their intracellular content. It also affects intracellular membranes such as those of mitochondria ; _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component D-PHE-ABZ-PHE-D-PHE-ASN-LYS-TYR-VAL-ORN-LEU _pdbx_nmr_exptl_sample.concentration 0.8 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling None # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A BE2 2 ? ? C A BE2 2 ? ? N A PHE 3 ? ? 144.26 117.20 27.06 2.20 Y 2 2 CA A BE2 2 ? ? C A BE2 2 ? ? N A PHE 3 ? ? 144.41 117.20 27.21 2.20 Y 3 3 CA A BE2 2 ? ? C A BE2 2 ? ? N A PHE 3 ? ? 143.15 117.20 25.95 2.20 Y 4 4 CA A BE2 2 ? ? C A BE2 2 ? ? N A PHE 3 ? ? 144.53 117.20 27.33 2.20 Y 5 5 CA A BE2 2 ? ? C A BE2 2 ? ? N A PHE 3 ? ? 144.03 117.20 26.83 2.20 Y 6 6 CA A BE2 2 ? ? C A BE2 2 ? ? N A PHE 3 ? ? 143.78 117.20 26.58 2.20 Y 7 7 CA A BE2 2 ? ? C A BE2 2 ? ? N A PHE 3 ? ? 143.62 117.20 26.42 2.20 Y 8 8 CA A BE2 2 ? ? C A BE2 2 ? ? N A PHE 3 ? ? 143.55 117.20 26.35 2.20 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 DPN A 4 ? ? -85.34 -127.87 2 1 ASN A 5 ? ? -125.17 -163.53 3 2 BE2 A 2 ? ? -175.55 -178.89 4 2 DPN A 4 ? ? -85.00 -124.14 5 3 BE2 A 2 ? ? 172.88 -166.88 6 3 DPN A 4 ? ? -85.06 -128.74 7 4 BE2 A 2 ? ? -173.37 -174.11 8 4 DPN A 4 ? ? -85.14 -119.86 9 4 LYS A 6 ? ? -67.21 0.57 10 5 DPN A 4 ? ? -85.47 -123.16 11 6 DPN A 4 ? ? -84.88 -138.38 12 7 BE2 A 2 ? ? -176.53 -180.00 13 7 DPN A 4 ? ? -85.32 -122.05 14 8 DPN A 4 ? ? -84.82 -105.30 15 8 TYR A 7 ? ? -126.92 -51.12 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ASN N N N N 1 ASN CA C N S 2 ASN C C N N 3 ASN O O N N 4 ASN CB C N N 5 ASN CG C N N 6 ASN OD1 O N N 7 ASN ND2 N N N 8 ASN OXT O N N 9 ASN H H N N 10 ASN H2 H N N 11 ASN HA H N N 12 ASN HB2 H N N 13 ASN HB3 H N N 14 ASN HD21 H N N 15 ASN HD22 H N N 16 ASN HXT H N N 17 BE2 C C N N 18 BE2 O O N N 19 BE2 OXT O N N 20 BE2 C1 C Y N 21 BE2 CA C Y N 22 BE2 C3 C Y N 23 BE2 N N N N 24 BE2 C4 C Y N 25 BE2 C5 C Y N 26 BE2 C6 C Y N 27 BE2 HXT H N N 28 BE2 H3 H N N 29 BE2 H H N N 30 BE2 H2 H N N 31 BE2 H4 H N N 32 BE2 H5 H N N 33 BE2 H6 H N N 34 DPN N N N N 35 DPN CA C N R 36 DPN C C N N 37 DPN O O N N 38 DPN OXT O N N 39 DPN CB C N N 40 DPN CG C Y N 41 DPN CD1 C Y N 42 DPN CD2 C Y N 43 DPN CE1 C Y N 44 DPN CE2 C Y N 45 DPN CZ C Y N 46 DPN H H N N 47 DPN H2 H N N 48 DPN HA H N N 49 DPN HXT H N N 50 DPN HB2 H N N 51 DPN HB3 H N N 52 DPN HD1 H N N 53 DPN HD2 H N N 54 DPN HE1 H N N 55 DPN HE2 H N N 56 DPN HZ H N N 57 LEU N N N N 58 LEU CA C N S 59 LEU C C N N 60 LEU O O N N 61 LEU CB C N N 62 LEU CG C N N 63 LEU CD1 C N N 64 LEU CD2 C N N 65 LEU OXT O N N 66 LEU H H N N 67 LEU H2 H N N 68 LEU HA H N N 69 LEU HB2 H N N 70 LEU HB3 H N N 71 LEU HG H N N 72 LEU HD11 H N N 73 LEU HD12 H N N 74 LEU HD13 H N N 75 LEU HD21 H N N 76 LEU HD22 H N N 77 LEU HD23 H N N 78 LEU HXT H N N 79 LYS N N N N 80 LYS CA C N S 81 LYS C C N N 82 LYS O O N N 83 LYS CB C N N 84 LYS CG C N N 85 LYS CD C N N 86 LYS CE C N N 87 LYS NZ N N N 88 LYS OXT O N N 89 LYS H H N N 90 LYS H2 H N N 91 LYS HA H N N 92 LYS HB2 H N N 93 LYS HB3 H N N 94 LYS HG2 H N N 95 LYS HG3 H N N 96 LYS HD2 H N N 97 LYS HD3 H N N 98 LYS HE2 H N N 99 LYS HE3 H N N 100 LYS HZ1 H N N 101 LYS HZ2 H N N 102 LYS HZ3 H N N 103 LYS HXT H N N 104 ORN N N N N 105 ORN CA C N S 106 ORN CB C N N 107 ORN CG C N N 108 ORN CD C N N 109 ORN NE N N N 110 ORN C C N N 111 ORN O O N N 112 ORN OXT O N N 113 ORN H H N N 114 ORN H2 H N N 115 ORN HA H N N 116 ORN HB2 H N N 117 ORN HB3 H N N 118 ORN HG2 H N N 119 ORN HG3 H N N 120 ORN HD2 H N N 121 ORN HD3 H N N 122 ORN HE1 H N N 123 ORN HE2 H N N 124 ORN HXT H N N 125 PHE N N N N 126 PHE CA C N S 127 PHE C C N N 128 PHE O O N N 129 PHE CB C N N 130 PHE CG C Y N 131 PHE CD1 C Y N 132 PHE CD2 C Y N 133 PHE CE1 C Y N 134 PHE CE2 C Y N 135 PHE CZ C Y N 136 PHE OXT O N N 137 PHE H H N N 138 PHE H2 H N N 139 PHE HA H N N 140 PHE HB2 H N N 141 PHE HB3 H N N 142 PHE HD1 H N N 143 PHE HD2 H N N 144 PHE HE1 H N N 145 PHE HE2 H N N 146 PHE HZ H N N 147 PHE HXT H N N 148 TYR N N N N 149 TYR CA C N S 150 TYR C C N N 151 TYR O O N N 152 TYR CB C N N 153 TYR CG C Y N 154 TYR CD1 C Y N 155 TYR CD2 C Y N 156 TYR CE1 C Y N 157 TYR CE2 C Y N 158 TYR CZ C Y N 159 TYR OH O N N 160 TYR OXT O N N 161 TYR H H N N 162 TYR H2 H N N 163 TYR HA H N N 164 TYR HB2 H N N 165 TYR HB3 H N N 166 TYR HD1 H N N 167 TYR HD2 H N N 168 TYR HE1 H N N 169 TYR HE2 H N N 170 TYR HH H N N 171 TYR HXT H N N 172 VAL N N N N 173 VAL CA C N S 174 VAL C C N N 175 VAL O O N N 176 VAL CB C N N 177 VAL CG1 C N N 178 VAL CG2 C N N 179 VAL OXT O N N 180 VAL H H N N 181 VAL H2 H N N 182 VAL HA H N N 183 VAL HB H N N 184 VAL HG11 H N N 185 VAL HG12 H N N 186 VAL HG13 H N N 187 VAL HG21 H N N 188 VAL HG22 H N N 189 VAL HG23 H N N 190 VAL HXT H N N 191 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ASN N CA sing N N 1 ASN N H sing N N 2 ASN N H2 sing N N 3 ASN CA C sing N N 4 ASN CA CB sing N N 5 ASN CA HA sing N N 6 ASN C O doub N N 7 ASN C OXT sing N N 8 ASN CB CG sing N N 9 ASN CB HB2 sing N N 10 ASN CB HB3 sing N N 11 ASN CG OD1 doub N N 12 ASN CG ND2 sing N N 13 ASN ND2 HD21 sing N N 14 ASN ND2 HD22 sing N N 15 ASN OXT HXT sing N N 16 BE2 C O doub N N 17 BE2 C OXT sing N N 18 BE2 C C1 sing N N 19 BE2 OXT HXT sing N N 20 BE2 C1 CA doub Y N 21 BE2 C1 C6 sing Y N 22 BE2 CA C3 sing Y N 23 BE2 CA N sing N N 24 BE2 C3 C4 doub Y N 25 BE2 C3 H3 sing N N 26 BE2 N H sing N N 27 BE2 N H2 sing N N 28 BE2 C4 C5 sing Y N 29 BE2 C4 H4 sing N N 30 BE2 C5 C6 doub Y N 31 BE2 C5 H5 sing N N 32 BE2 C6 H6 sing N N 33 DPN N CA sing N N 34 DPN N H sing N N 35 DPN N H2 sing N N 36 DPN CA C sing N N 37 DPN CA CB sing N N 38 DPN CA HA sing N N 39 DPN C O doub N N 40 DPN C OXT sing N N 41 DPN OXT HXT sing N N 42 DPN CB CG sing N N 43 DPN CB HB2 sing N N 44 DPN CB HB3 sing N N 45 DPN CG CD1 doub Y N 46 DPN CG CD2 sing Y N 47 DPN CD1 CE1 sing Y N 48 DPN CD1 HD1 sing N N 49 DPN CD2 CE2 doub Y N 50 DPN CD2 HD2 sing N N 51 DPN CE1 CZ doub Y N 52 DPN CE1 HE1 sing N N 53 DPN CE2 CZ sing Y N 54 DPN CE2 HE2 sing N N 55 DPN CZ HZ sing N N 56 LEU N CA sing N N 57 LEU N H sing N N 58 LEU N H2 sing N N 59 LEU CA C sing N N 60 LEU CA CB sing N N 61 LEU CA HA sing N N 62 LEU C O doub N N 63 LEU C OXT sing N N 64 LEU CB CG sing N N 65 LEU CB HB2 sing N N 66 LEU CB HB3 sing N N 67 LEU CG CD1 sing N N 68 LEU CG CD2 sing N N 69 LEU CG HG sing N N 70 LEU CD1 HD11 sing N N 71 LEU CD1 HD12 sing N N 72 LEU CD1 HD13 sing N N 73 LEU CD2 HD21 sing N N 74 LEU CD2 HD22 sing N N 75 LEU CD2 HD23 sing N N 76 LEU OXT HXT sing N N 77 LYS N CA sing N N 78 LYS N H sing N N 79 LYS N H2 sing N N 80 LYS CA C sing N N 81 LYS CA CB sing N N 82 LYS CA HA sing N N 83 LYS C O doub N N 84 LYS C OXT sing N N 85 LYS CB CG sing N N 86 LYS CB HB2 sing N N 87 LYS CB HB3 sing N N 88 LYS CG CD sing N N 89 LYS CG HG2 sing N N 90 LYS CG HG3 sing N N 91 LYS CD CE sing N N 92 LYS CD HD2 sing N N 93 LYS CD HD3 sing N N 94 LYS CE NZ sing N N 95 LYS CE HE2 sing N N 96 LYS CE HE3 sing N N 97 LYS NZ HZ1 sing N N 98 LYS NZ HZ2 sing N N 99 LYS NZ HZ3 sing N N 100 LYS OXT HXT sing N N 101 ORN N CA sing N N 102 ORN N H sing N N 103 ORN N H2 sing N N 104 ORN CA CB sing N N 105 ORN CA C sing N N 106 ORN CA HA sing N N 107 ORN CB CG sing N N 108 ORN CB HB2 sing N N 109 ORN CB HB3 sing N N 110 ORN CG CD sing N N 111 ORN CG HG2 sing N N 112 ORN CG HG3 sing N N 113 ORN CD NE sing N N 114 ORN CD HD2 sing N N 115 ORN CD HD3 sing N N 116 ORN NE HE1 sing N N 117 ORN NE HE2 sing N N 118 ORN C O doub N N 119 ORN C OXT sing N N 120 ORN OXT HXT sing N N 121 PHE N CA sing N N 122 PHE N H sing N N 123 PHE N H2 sing N N 124 PHE CA C sing N N 125 PHE CA CB sing N N 126 PHE CA HA sing N N 127 PHE C O doub N N 128 PHE C OXT sing N N 129 PHE CB CG sing N N 130 PHE CB HB2 sing N N 131 PHE CB HB3 sing N N 132 PHE CG CD1 doub Y N 133 PHE CG CD2 sing Y N 134 PHE CD1 CE1 sing Y N 135 PHE CD1 HD1 sing N N 136 PHE CD2 CE2 doub Y N 137 PHE CD2 HD2 sing N N 138 PHE CE1 CZ doub Y N 139 PHE CE1 HE1 sing N N 140 PHE CE2 CZ sing Y N 141 PHE CE2 HE2 sing N N 142 PHE CZ HZ sing N N 143 PHE OXT HXT sing N N 144 TYR N CA sing N N 145 TYR N H sing N N 146 TYR N H2 sing N N 147 TYR CA C sing N N 148 TYR CA CB sing N N 149 TYR CA HA sing N N 150 TYR C O doub N N 151 TYR C OXT sing N N 152 TYR CB CG sing N N 153 TYR CB HB2 sing N N 154 TYR CB HB3 sing N N 155 TYR CG CD1 doub Y N 156 TYR CG CD2 sing Y N 157 TYR CD1 CE1 sing Y N 158 TYR CD1 HD1 sing N N 159 TYR CD2 CE2 doub Y N 160 TYR CD2 HD2 sing N N 161 TYR CE1 CZ doub Y N 162 TYR CE1 HE1 sing N N 163 TYR CE2 CZ sing Y N 164 TYR CE2 HE2 sing N N 165 TYR CZ OH sing N N 166 TYR OH HH sing N N 167 TYR OXT HXT sing N N 168 VAL N CA sing N N 169 VAL N H sing N N 170 VAL N H2 sing N N 171 VAL CA C sing N N 172 VAL CA CB sing N N 173 VAL CA HA sing N N 174 VAL C O doub N N 175 VAL C OXT sing N N 176 VAL CB CG1 sing N N 177 VAL CB CG2 sing N N 178 VAL CB HB sing N N 179 VAL CG1 HG11 sing N N 180 VAL CG1 HG12 sing N N 181 VAL CG1 HG13 sing N N 182 VAL CG2 HG21 sing N N 183 VAL CG2 HG22 sing N N 184 VAL CG2 HG23 sing N N 185 VAL OXT HXT sing N N 186 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #