data_6BSF # _entry.id 6BSF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.348 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6BSF pdb_00006bsf 10.2210/pdb6bsf/pdb WWPDB D_1000231369 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6BSF _pdbx_database_status.recvd_initial_deposition_date 2017-12-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Pufall, M.A.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID 0000-0002-7022-6916 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'General and sequence-specific roles for DNA in glucocorticoid receptor DNA-binding stoichiometry' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # _citation_author.citation_id primary _citation_author.name 'Pufall, M.A.' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 6BSF _cell.length_a 38.345 _cell.length_b 87.907 _cell.length_c 103.702 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6BSF _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Glucocorticoid receptor' 10178.069 2 ? ? ? ? 2 polymer syn ;DNA (5'-D(P*TP*GP*CP*AP*AP*AP*TP*GP*TP*AP*CP*TP*AP*GP*CP*T)-3') ; 4897.203 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(P*AP*AP*GP*CP*TP*AP*GP*TP*AP*CP*AP*TP*TP*TP*GP*C)-3') ; 4897.203 1 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 4 ? ? ? ? 5 water nat water 18.015 13 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'GR,Nuclear receptor subfamily 3 group C member 1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSHMKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTK KKIKGIQQATT ; ;GSHMKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTK KKIKGIQQATT ; B,A ? 2 polydeoxyribonucleotide no no '(DT)(DG)(DC)(DA)(DA)(DA)(DT)(DG)(DT)(DA)(DC)(DT)(DA)(DG)(DC)(DT)' TGCAAATGTACTAGCT C ? 3 polydeoxyribonucleotide no no '(DA)(DA)(DG)(DC)(DT)(DA)(DG)(DT)(DA)(DC)(DA)(DT)(DT)(DT)(DG)(DC)' AAGCTAGTACATTTGC D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 LYS n 1 6 LEU n 1 7 CYS n 1 8 LEU n 1 9 VAL n 1 10 CYS n 1 11 SER n 1 12 ASP n 1 13 GLU n 1 14 ALA n 1 15 SER n 1 16 GLY n 1 17 CYS n 1 18 HIS n 1 19 TYR n 1 20 GLY n 1 21 VAL n 1 22 LEU n 1 23 THR n 1 24 CYS n 1 25 GLY n 1 26 SER n 1 27 CYS n 1 28 LYS n 1 29 VAL n 1 30 PHE n 1 31 PHE n 1 32 LYS n 1 33 ARG n 1 34 ALA n 1 35 VAL n 1 36 GLU n 1 37 GLY n 1 38 GLN n 1 39 HIS n 1 40 ASN n 1 41 TYR n 1 42 LEU n 1 43 CYS n 1 44 ALA n 1 45 GLY n 1 46 ARG n 1 47 ASN n 1 48 ASP n 1 49 CYS n 1 50 ILE n 1 51 ILE n 1 52 ASP n 1 53 LYS n 1 54 ILE n 1 55 ARG n 1 56 ARG n 1 57 LYS n 1 58 ASN n 1 59 CYS n 1 60 PRO n 1 61 ALA n 1 62 CYS n 1 63 ARG n 1 64 TYR n 1 65 ARG n 1 66 LYS n 1 67 CYS n 1 68 LEU n 1 69 GLN n 1 70 ALA n 1 71 GLY n 1 72 MET n 1 73 ASN n 1 74 LEU n 1 75 GLU n 1 76 ALA n 1 77 ARG n 1 78 LYS n 1 79 THR n 1 80 LYS n 1 81 LYS n 1 82 LYS n 1 83 ILE n 1 84 LYS n 1 85 GLY n 1 86 ILE n 1 87 GLN n 1 88 GLN n 1 89 ALA n 1 90 THR n 1 91 THR n 2 1 DT n 2 2 DG n 2 3 DC n 2 4 DA n 2 5 DA n 2 6 DA n 2 7 DT n 2 8 DG n 2 9 DT n 2 10 DA n 2 11 DC n 2 12 DT n 2 13 DA n 2 14 DG n 2 15 DC n 2 16 DT n 3 1 DA n 3 2 DA n 3 3 DG n 3 4 DC n 3 5 DT n 3 6 DA n 3 7 DG n 3 8 DT n 3 9 DA n 3 10 DC n 3 11 DA n 3 12 DT n 3 13 DT n 3 14 DT n 3 15 DG n 3 16 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 91 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NR3C1, GRL' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant DE3 _entity_src_gen.pdbx_host_org_cell_line Gold _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 16 'synthetic construct' ? 32630 ? 3 1 sample 1 16 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP GCR_HUMAN P04150 ? 1 ;KLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIK GIQQATT ; 419 2 PDB 6BSF 6BSF ? 2 ? 1 3 PDB 6BSF 6BSF ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6BSF B 5 ? 91 ? P04150 419 ? 505 ? 419 505 2 2 6BSF C 1 ? 16 ? 6BSF 0 ? 15 ? 0 15 3 3 6BSF D 1 ? 16 ? 6BSF 1 ? 16 ? 1 16 4 1 6BSF A 5 ? 91 ? P04150 419 ? 505 ? 419 505 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6BSF GLY B 1 ? UNP P04150 ? ? 'expression tag' 415 1 1 6BSF SER B 2 ? UNP P04150 ? ? 'expression tag' 416 2 1 6BSF HIS B 3 ? UNP P04150 ? ? 'expression tag' 417 3 1 6BSF MET B 4 ? UNP P04150 ? ? 'expression tag' 418 4 4 6BSF GLY A 1 ? UNP P04150 ? ? 'expression tag' 414 5 4 6BSF SER A 2 ? UNP P04150 ? ? 'expression tag' 415 6 4 6BSF HIS A 3 ? UNP P04150 ? ? 'expression tag' 416 7 4 6BSF MET A 4 ? UNP P04150 ? ? 'expression tag' 417 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6BSF _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.93 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 58.08 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.05 M MES monohydrate pH 6.0 0.005 M Magnesium sulfate heptahydrate 5% w/v Polyethylene glycol 4,000 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type NOIR-1 _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-12-19 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 4.2.2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 4.2.2 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate 58.92 _reflns.entry_id 6BSF _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.4 _reflns.d_resolution_low 33.528 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 14303 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.62 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.7 _reflns.pdbx_Rmerge_I_obs 0.07266 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 17.8 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.07879 _reflns.pdbx_Rpim_I_all 0.03007 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.4 _reflns_shell.d_res_low 2.486 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.03 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1373 _reflns_shell.percent_possible_all 99.85 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.354 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 5.5 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 1.497 _reflns_shell.pdbx_Rpim_I_all 0.628 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.681 _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 6BSF _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 14270 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 33.528 _refine.ls_d_res_high 2.400 _refine.ls_percent_reflns_obs 99.68 _refine.ls_R_factor_obs 0.2075 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2061 _refine.ls_R_factor_R_free 0.2334 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.01 _refine.ls_number_reflns_R_free 715 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.35 _refine.pdbx_overall_phase_error 28.53 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1099 _refine_hist.pdbx_number_atoms_nucleic_acid 652 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 14 _refine_hist.number_atoms_total 1769 _refine_hist.d_res_high 2.400 _refine_hist.d_res_low 33.528 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.014 ? ? 1847 'X-RAY DIFFRACTION' ? f_angle_d 1.474 ? ? 2615 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 19.936 ? ? 998 'X-RAY DIFFRACTION' ? f_chiral_restr 0.064 ? ? 288 'X-RAY DIFFRACTION' ? f_plane_restr 0.007 ? ? 226 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.4001 2.5853 2649 0.3205 100.00 0.3466 . . 140 . . . . 'X-RAY DIFFRACTION' . 2.5853 2.8454 2638 0.2838 100.00 0.3274 . . 156 . . . . 'X-RAY DIFFRACTION' . 2.8454 3.2568 2714 0.2614 100.00 0.3139 . . 120 . . . . 'X-RAY DIFFRACTION' . 3.2568 4.1021 2696 0.2024 99.00 0.2222 . . 143 . . . . 'X-RAY DIFFRACTION' . 4.1021 33.5314 2858 0.1649 100.00 0.1915 . . 156 . . . . # _struct.entry_id 6BSF _struct.title 'Human GR (418-507) in complex with monomeric DNA binding site' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6BSF _struct_keywords.text 'Glucocorticoid receptor Monomeric binding site, DNA BINDING PROTEIN-DNA complex' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 1 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 5 ? J N N 5 ? K N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 CYS A 24 ? GLY A 37 ? CYS B 438 GLY B 451 1 ? 14 HELX_P HELX_P2 AA2 CYS A 59 ? GLY A 71 ? CYS B 473 GLY B 485 1 ? 13 HELX_P HELX_P3 AA3 CYS D 24 ? GLY D 37 ? CYS A 438 GLY A 451 1 ? 14 HELX_P HELX_P4 AA4 ILE D 54 ? ASN D 58 ? ILE A 468 ASN A 472 5 ? 5 HELX_P HELX_P5 AA5 CYS D 59 ? GLY D 71 ? CYS A 473 GLY A 485 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 7 SG ? ? ? 1_555 E ZN . ZN ? ? B CYS 421 B ZN 601 1_555 ? ? ? ? ? ? ? 2.405 ? ? metalc2 metalc ? ? A CYS 10 SG ? ? ? 1_555 E ZN . ZN ? ? B CYS 424 B ZN 601 1_555 ? ? ? ? ? ? ? 2.334 ? ? metalc3 metalc ? ? A CYS 24 SG ? ? ? 1_555 E ZN . ZN ? ? B CYS 438 B ZN 601 1_555 ? ? ? ? ? ? ? 2.446 ? ? metalc4 metalc ? ? A CYS 27 SG ? ? ? 1_555 E ZN . ZN ? ? B CYS 441 B ZN 601 1_555 ? ? ? ? ? ? ? 2.210 ? ? metalc5 metalc ? ? A CYS 43 SG ? ? ? 1_555 F ZN . ZN ? ? B CYS 457 B ZN 602 1_555 ? ? ? ? ? ? ? 2.286 ? ? metalc6 metalc ? ? A CYS 49 SG ? ? ? 1_555 F ZN . ZN ? ? B CYS 463 B ZN 602 1_555 ? ? ? ? ? ? ? 2.268 ? ? metalc7 metalc ? ? A CYS 59 SG ? ? ? 1_555 F ZN . ZN ? ? B CYS 473 B ZN 602 1_555 ? ? ? ? ? ? ? 2.401 ? ? metalc8 metalc ? ? A CYS 62 SG ? ? ? 1_555 F ZN . ZN ? ? B CYS 476 B ZN 602 1_555 ? ? ? ? ? ? ? 2.414 ? ? metalc9 metalc ? ? D CYS 7 SG ? ? ? 1_555 H ZN . ZN ? ? A CYS 421 A ZN 602 1_555 ? ? ? ? ? ? ? 2.486 ? ? metalc10 metalc ? ? D CYS 10 SG ? ? ? 1_555 H ZN . ZN ? ? A CYS 424 A ZN 602 1_555 ? ? ? ? ? ? ? 2.284 ? ? metalc11 metalc ? ? D CYS 24 SG ? ? ? 1_555 H ZN . ZN ? ? A CYS 438 A ZN 602 1_555 ? ? ? ? ? ? ? 2.225 ? ? metalc12 metalc ? ? D CYS 27 SG ? ? ? 1_555 H ZN . ZN ? ? A CYS 441 A ZN 602 1_555 ? ? ? ? ? ? ? 2.286 ? ? metalc13 metalc ? ? D CYS 43 SG ? ? ? 1_555 G ZN . ZN ? ? A CYS 457 A ZN 601 1_555 ? ? ? ? ? ? ? 2.338 ? ? metalc14 metalc ? ? D CYS 49 SG ? ? ? 1_555 G ZN . ZN ? ? A CYS 463 A ZN 601 1_555 ? ? ? ? ? ? ? 2.289 ? ? metalc15 metalc ? ? D CYS 59 SG ? ? ? 1_555 G ZN . ZN ? ? A CYS 473 A ZN 601 1_555 ? ? ? ? ? ? ? 2.426 ? ? metalc16 metalc ? ? D CYS 62 SG ? ? ? 1_555 G ZN . ZN ? ? A CYS 476 A ZN 601 1_555 ? ? ? ? ? ? ? 2.454 ? ? hydrog1 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 16 N3 ? ? C DG 1 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 16 O2 ? ? C DG 1 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 16 N4 ? ? C DG 1 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 3 N3 ? ? ? 1_555 C DG 15 N1 ? ? C DC 2 D DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 3 N4 ? ? ? 1_555 C DG 15 O6 ? ? C DC 2 D DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 3 O2 ? ? ? 1_555 C DG 15 N2 ? ? C DC 2 D DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DA 4 N1 ? ? ? 1_555 C DT 14 N3 ? ? C DA 3 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DA 4 N6 ? ? ? 1_555 C DT 14 O4 ? ? C DA 3 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DA 5 N1 ? ? ? 1_555 C DT 13 N3 ? ? C DA 4 D DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DA 5 N6 ? ? ? 1_555 C DT 13 O4 ? ? C DA 4 D DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DA 6 N1 ? ? ? 1_555 C DT 12 N3 ? ? C DA 5 D DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DA 6 N6 ? ? ? 1_555 C DT 12 O4 ? ? C DA 5 D DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DT 7 N3 ? ? ? 1_555 C DA 11 N1 ? ? C DT 6 D DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DT 7 O4 ? ? ? 1_555 C DA 11 N6 ? ? C DT 6 D DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DG 8 N1 ? ? ? 1_555 C DC 10 N3 ? ? C DG 7 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DG 8 N2 ? ? ? 1_555 C DC 10 O2 ? ? C DG 7 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DG 8 O6 ? ? ? 1_555 C DC 10 N4 ? ? C DG 7 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DT 9 N3 ? ? ? 1_555 C DA 9 N1 ? ? C DT 8 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DT 9 O4 ? ? ? 1_555 C DA 9 N6 ? ? C DT 8 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DA 10 N1 ? ? ? 1_555 C DT 8 N3 ? ? C DA 9 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DA 10 N6 ? ? ? 1_555 C DT 8 O4 ? ? C DA 9 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DC 11 N3 ? ? ? 1_555 C DG 7 N1 ? ? C DC 10 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DC 11 N4 ? ? ? 1_555 C DG 7 O6 ? ? C DC 10 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DC 11 O2 ? ? ? 1_555 C DG 7 N2 ? ? C DC 10 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DT 12 N3 ? ? ? 1_555 C DA 6 N1 ? ? C DT 11 D DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DT 12 O4 ? ? ? 1_555 C DA 6 N6 ? ? C DT 11 D DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DA 13 N1 ? ? ? 1_555 C DT 5 N3 ? ? C DA 12 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DA 13 N6 ? ? ? 1_555 C DT 5 O4 ? ? C DA 12 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DG 14 N1 ? ? ? 1_555 C DC 4 N3 ? ? C DG 13 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DG 14 N2 ? ? ? 1_555 C DC 4 O2 ? ? C DG 13 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DG 14 O6 ? ? ? 1_555 C DC 4 N4 ? ? C DG 13 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DC 15 N3 ? ? ? 1_555 C DG 3 N1 ? ? C DC 14 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DC 15 N4 ? ? ? 1_555 C DG 3 O6 ? ? C DC 14 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DC 15 O2 ? ? ? 1_555 C DG 3 N2 ? ? C DC 14 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DT 16 N3 ? ? ? 1_555 C DA 2 N1 ? ? C DT 15 D DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DT 16 O4 ? ? ? 1_555 C DA 2 N6 ? ? C DT 15 D DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLY A 16 ? HIS A 18 ? GLY B 430 HIS B 432 AA1 2 VAL A 21 ? THR A 23 ? VAL B 435 THR B 437 AA2 1 CYS D 17 ? HIS D 18 ? CYS A 431 HIS A 432 AA2 2 VAL D 21 ? LEU D 22 ? VAL A 435 LEU A 436 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLY A 16 ? N GLY B 430 O THR A 23 ? O THR B 437 AA2 1 2 N HIS D 18 ? N HIS A 432 O VAL D 21 ? O VAL A 435 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B ZN 601 ? 4 'binding site for residue ZN B 601' AC2 Software B ZN 602 ? 4 'binding site for residue ZN B 602' AC3 Software A ZN 601 ? 4 'binding site for residue ZN A 601' AC4 Software A ZN 602 ? 4 'binding site for residue ZN A 602' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 7 ? CYS B 421 . ? 1_555 ? 2 AC1 4 CYS A 10 ? CYS B 424 . ? 1_555 ? 3 AC1 4 CYS A 24 ? CYS B 438 . ? 1_555 ? 4 AC1 4 CYS A 27 ? CYS B 441 . ? 1_555 ? 5 AC2 4 CYS A 43 ? CYS B 457 . ? 1_555 ? 6 AC2 4 CYS A 49 ? CYS B 463 . ? 1_555 ? 7 AC2 4 CYS A 59 ? CYS B 473 . ? 1_555 ? 8 AC2 4 CYS A 62 ? CYS B 476 . ? 1_555 ? 9 AC3 4 CYS D 43 ? CYS A 457 . ? 1_555 ? 10 AC3 4 CYS D 49 ? CYS A 463 . ? 1_555 ? 11 AC3 4 CYS D 59 ? CYS A 473 . ? 1_555 ? 12 AC3 4 CYS D 62 ? CYS A 476 . ? 1_555 ? 13 AC4 4 CYS D 7 ? CYS A 421 . ? 1_555 ? 14 AC4 4 CYS D 10 ? CYS A 424 . ? 1_555 ? 15 AC4 4 CYS D 24 ? CYS A 438 . ? 1_555 ? 16 AC4 4 CYS D 27 ? CYS A 441 . ? 1_555 ? # _atom_sites.entry_id 6BSF _atom_sites.fract_transf_matrix[1][1] 0.026079 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011376 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009643 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 415 ? ? ? B . n A 1 2 SER 2 416 ? ? ? B . n A 1 3 HIS 3 417 417 HIS HIS B . n A 1 4 MET 4 418 418 MET MET B . n A 1 5 LYS 5 419 419 LYS LYS B . n A 1 6 LEU 6 420 420 LEU LEU B . n A 1 7 CYS 7 421 421 CYS CYS B . n A 1 8 LEU 8 422 422 LEU LEU B . n A 1 9 VAL 9 423 423 VAL VAL B . n A 1 10 CYS 10 424 424 CYS CYS B . n A 1 11 SER 11 425 425 SER SER B . n A 1 12 ASP 12 426 426 ASP ASP B . n A 1 13 GLU 13 427 427 GLU GLU B . n A 1 14 ALA 14 428 428 ALA ALA B . n A 1 15 SER 15 429 429 SER SER B . n A 1 16 GLY 16 430 430 GLY GLY B . n A 1 17 CYS 17 431 431 CYS CYS B . n A 1 18 HIS 18 432 432 HIS HIS B . n A 1 19 TYR 19 433 433 TYR TYR B . n A 1 20 GLY 20 434 434 GLY GLY B . n A 1 21 VAL 21 435 435 VAL VAL B . n A 1 22 LEU 22 436 436 LEU LEU B . n A 1 23 THR 23 437 437 THR THR B . n A 1 24 CYS 24 438 438 CYS CYS B . n A 1 25 GLY 25 439 439 GLY GLY B . n A 1 26 SER 26 440 440 SER SER B . n A 1 27 CYS 27 441 441 CYS CYS B . n A 1 28 LYS 28 442 442 LYS LYS B . n A 1 29 VAL 29 443 443 VAL VAL B . n A 1 30 PHE 30 444 444 PHE PHE B . n A 1 31 PHE 31 445 445 PHE PHE B . n A 1 32 LYS 32 446 446 LYS LYS B . n A 1 33 ARG 33 447 447 ARG ARG B . n A 1 34 ALA 34 448 448 ALA ALA B . n A 1 35 VAL 35 449 449 VAL VAL B . n A 1 36 GLU 36 450 450 GLU GLU B . n A 1 37 GLY 37 451 451 GLY GLY B . n A 1 38 GLN 38 452 452 GLN GLN B . n A 1 39 HIS 39 453 453 HIS HIS B . n A 1 40 ASN 40 454 454 ASN ASN B . n A 1 41 TYR 41 455 455 TYR TYR B . n A 1 42 LEU 42 456 456 LEU LEU B . n A 1 43 CYS 43 457 457 CYS CYS B . n A 1 44 ALA 44 458 458 ALA ALA B . n A 1 45 GLY 45 459 459 GLY GLY B . n A 1 46 ARG 46 460 460 ARG ARG B . n A 1 47 ASN 47 461 461 ASN ASN B . n A 1 48 ASP 48 462 462 ASP ASP B . n A 1 49 CYS 49 463 463 CYS CYS B . n A 1 50 ILE 50 464 464 ILE ILE B . n A 1 51 ILE 51 465 465 ILE ILE B . n A 1 52 ASP 52 466 466 ASP ASP B . n A 1 53 LYS 53 467 467 LYS LYS B . n A 1 54 ILE 54 468 468 ILE ILE B . n A 1 55 ARG 55 469 469 ARG ARG B . n A 1 56 ARG 56 470 470 ARG ARG B . n A 1 57 LYS 57 471 471 LYS LYS B . n A 1 58 ASN 58 472 472 ASN ASN B . n A 1 59 CYS 59 473 473 CYS CYS B . n A 1 60 PRO 60 474 474 PRO PRO B . n A 1 61 ALA 61 475 475 ALA ALA B . n A 1 62 CYS 62 476 476 CYS CYS B . n A 1 63 ARG 63 477 477 ARG ARG B . n A 1 64 TYR 64 478 478 TYR TYR B . n A 1 65 ARG 65 479 479 ARG ARG B . n A 1 66 LYS 66 480 480 LYS LYS B . n A 1 67 CYS 67 481 481 CYS CYS B . n A 1 68 LEU 68 482 482 LEU LEU B . n A 1 69 GLN 69 483 483 GLN GLN B . n A 1 70 ALA 70 484 484 ALA ALA B . n A 1 71 GLY 71 485 485 GLY GLY B . n A 1 72 MET 72 486 486 MET MET B . n A 1 73 ASN 73 487 487 ASN ASN B . n A 1 74 LEU 74 488 488 LEU LEU B . n A 1 75 GLU 75 489 489 GLU GLU B . n A 1 76 ALA 76 490 ? ? ? B . n A 1 77 ARG 77 491 ? ? ? B . n A 1 78 LYS 78 492 ? ? ? B . n A 1 79 THR 79 493 ? ? ? B . n A 1 80 LYS 80 494 ? ? ? B . n A 1 81 LYS 81 495 ? ? ? B . n A 1 82 LYS 82 496 ? ? ? B . n A 1 83 ILE 83 497 ? ? ? B . n A 1 84 LYS 84 498 ? ? ? B . n A 1 85 GLY 85 499 ? ? ? B . n A 1 86 ILE 86 500 ? ? ? B . n A 1 87 GLN 87 501 ? ? ? B . n A 1 88 GLN 88 502 ? ? ? B . n A 1 89 ALA 89 503 ? ? ? B . n A 1 90 THR 90 504 ? ? ? B . n A 1 91 THR 91 505 ? ? ? B . n B 2 1 DT 1 0 0 DT DT C . n B 2 2 DG 2 1 1 DG DG C . n B 2 3 DC 3 2 2 DC DC C . n B 2 4 DA 4 3 3 DA DA C . n B 2 5 DA 5 4 4 DA DA C . n B 2 6 DA 6 5 5 DA DA C . n B 2 7 DT 7 6 6 DT DT C . n B 2 8 DG 8 7 7 DG DG C . n B 2 9 DT 9 8 8 DT DT C . n B 2 10 DA 10 9 9 DA DA C . n B 2 11 DC 11 10 10 DC DC C . n B 2 12 DT 12 11 11 DT DT C . n B 2 13 DA 13 12 12 DA DA C . n B 2 14 DG 14 13 13 DG DG C . n B 2 15 DC 15 14 14 DC DC C . n B 2 16 DT 16 15 15 DT DT C . n C 3 1 DA 1 1 1 DA DA D . n C 3 2 DA 2 2 2 DA DA D . n C 3 3 DG 3 3 3 DG DG D . n C 3 4 DC 4 4 4 DC DC D . n C 3 5 DT 5 5 5 DT DT D . n C 3 6 DA 6 6 6 DA DA D . n C 3 7 DG 7 7 7 DG DG D . n C 3 8 DT 8 8 8 DT DT D . n C 3 9 DA 9 9 9 DA DA D . n C 3 10 DC 10 10 10 DC DC D . n C 3 11 DA 11 11 11 DA DA D . n C 3 12 DT 12 12 12 DT DT D . n C 3 13 DT 13 13 13 DT DT D . n C 3 14 DT 14 14 14 DT DT D . n C 3 15 DG 15 15 15 DG DG D . n C 3 16 DC 16 16 16 DC DC D . n D 1 1 GLY 1 414 ? ? ? A . n D 1 2 SER 2 415 ? ? ? A . n D 1 3 HIS 3 416 ? ? ? A . n D 1 4 MET 4 417 418 MET HIS A . n D 1 5 LYS 5 419 419 LYS LYS A . n D 1 6 LEU 6 420 420 LEU LEU A . n D 1 7 CYS 7 421 421 CYS CYS A . n D 1 8 LEU 8 422 422 LEU LEU A . n D 1 9 VAL 9 423 423 VAL VAL A . n D 1 10 CYS 10 424 424 CYS CYS A . n D 1 11 SER 11 425 425 SER SER A . n D 1 12 ASP 12 426 426 ASP ASP A . n D 1 13 GLU 13 427 427 GLU GLU A . n D 1 14 ALA 14 428 428 ALA ALA A . n D 1 15 SER 15 429 429 SER SER A . n D 1 16 GLY 16 430 430 GLY GLY A . n D 1 17 CYS 17 431 431 CYS CYS A . n D 1 18 HIS 18 432 432 HIS HIS A . n D 1 19 TYR 19 433 433 TYR TYR A . n D 1 20 GLY 20 434 434 GLY GLY A . n D 1 21 VAL 21 435 435 VAL VAL A . n D 1 22 LEU 22 436 436 LEU LEU A . n D 1 23 THR 23 437 437 THR THR A . n D 1 24 CYS 24 438 438 CYS CYS A . n D 1 25 GLY 25 439 439 GLY GLY A . n D 1 26 SER 26 440 440 SER SER A . n D 1 27 CYS 27 441 441 CYS CYS A . n D 1 28 LYS 28 442 442 LYS LYS A . n D 1 29 VAL 29 443 443 VAL VAL A . n D 1 30 PHE 30 444 444 PHE PHE A . n D 1 31 PHE 31 445 445 PHE PHE A . n D 1 32 LYS 32 446 446 LYS LYS A . n D 1 33 ARG 33 447 447 ARG ARG A . n D 1 34 ALA 34 448 448 ALA ALA A . n D 1 35 VAL 35 449 449 VAL VAL A . n D 1 36 GLU 36 450 450 GLU GLU A . n D 1 37 GLY 37 451 451 GLY GLY A . n D 1 38 GLN 38 452 452 GLN GLN A . n D 1 39 HIS 39 453 453 HIS HIS A . n D 1 40 ASN 40 454 454 ASN ASN A . n D 1 41 TYR 41 455 455 TYR TYR A . n D 1 42 LEU 42 456 456 LEU LEU A . n D 1 43 CYS 43 457 457 CYS CYS A . n D 1 44 ALA 44 458 458 ALA ALA A . n D 1 45 GLY 45 459 459 GLY GLY A . n D 1 46 ARG 46 460 460 ARG ARG A . n D 1 47 ASN 47 461 461 ASN ASN A . n D 1 48 ASP 48 462 462 ASP ASP A . n D 1 49 CYS 49 463 463 CYS CYS A . n D 1 50 ILE 50 464 464 ILE ILE A . n D 1 51 ILE 51 465 465 ILE ILE A . n D 1 52 ASP 52 466 466 ASP ASP A . n D 1 53 LYS 53 467 467 LYS LYS A . n D 1 54 ILE 54 468 468 ILE ILE A . n D 1 55 ARG 55 469 469 ARG ARG A . n D 1 56 ARG 56 470 470 ARG ARG A . n D 1 57 LYS 57 471 471 LYS LYS A . n D 1 58 ASN 58 472 472 ASN ASN A . n D 1 59 CYS 59 473 473 CYS CYS A . n D 1 60 PRO 60 474 474 PRO PRO A . n D 1 61 ALA 61 475 475 ALA ALA A . n D 1 62 CYS 62 476 476 CYS CYS A . n D 1 63 ARG 63 477 477 ARG ARG A . n D 1 64 TYR 64 478 478 TYR TYR A . n D 1 65 ARG 65 479 479 ARG ARG A . n D 1 66 LYS 66 480 480 LYS LYS A . n D 1 67 CYS 67 481 481 CYS CYS A . n D 1 68 LEU 68 482 482 LEU LEU A . n D 1 69 GLN 69 483 483 GLN GLN A . n D 1 70 ALA 70 484 484 ALA ALA A . n D 1 71 GLY 71 485 485 GLY GLY A . n D 1 72 MET 72 486 486 MET MET A . n D 1 73 ASN 73 487 487 ASN ASN A . n D 1 74 LEU 74 488 488 LEU LEU A . n D 1 75 GLU 75 489 489 GLU GLU A . n D 1 76 ALA 76 490 ? ? ? A . n D 1 77 ARG 77 491 ? ? ? A . n D 1 78 LYS 78 492 ? ? ? A . n D 1 79 THR 79 493 ? ? ? A . n D 1 80 LYS 80 494 ? ? ? A . n D 1 81 LYS 81 495 ? ? ? A . n D 1 82 LYS 82 496 ? ? ? A . n D 1 83 ILE 83 497 ? ? ? A . n D 1 84 LYS 84 498 ? ? ? A . n D 1 85 GLY 85 499 ? ? ? A . n D 1 86 ILE 86 500 ? ? ? A . n D 1 87 GLN 87 501 ? ? ? A . n D 1 88 GLN 88 502 ? ? ? A . n D 1 89 ALA 89 503 ? ? ? A . n D 1 90 THR 90 504 ? ? ? A . n D 1 91 THR 91 505 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 ZN 1 601 508 ZN ZN B . F 4 ZN 1 602 509 ZN ZN B . G 4 ZN 1 601 508 ZN ZN A . H 4 ZN 1 602 509 ZN ZN A . I 5 HOH 1 701 12 HOH HOH B . I 5 HOH 2 702 1 HOH HOH B . I 5 HOH 3 703 6 HOH HOH B . I 5 HOH 4 704 3 HOH HOH B . I 5 HOH 5 705 4 HOH HOH B . I 5 HOH 6 706 9 HOH HOH B . I 5 HOH 7 707 11 HOH HOH B . I 5 HOH 8 708 7 HOH HOH B . J 5 HOH 1 101 5 HOH HOH C . K 5 HOH 1 702 14 HOH HOH A . K 5 HOH 2 703 10 HOH HOH A . K 5 HOH 3 704 2 HOH HOH A . K 5 HOH 4 705 8 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4360 ? 1 MORE -26 ? 1 'SSA (A^2)' 12670 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 7 ? B CYS 421 ? 1_555 ZN ? E ZN . ? B ZN 601 ? 1_555 SG ? A CYS 10 ? B CYS 424 ? 1_555 110.0 ? 2 SG ? A CYS 7 ? B CYS 421 ? 1_555 ZN ? E ZN . ? B ZN 601 ? 1_555 SG ? A CYS 24 ? B CYS 438 ? 1_555 122.0 ? 3 SG ? A CYS 10 ? B CYS 424 ? 1_555 ZN ? E ZN . ? B ZN 601 ? 1_555 SG ? A CYS 24 ? B CYS 438 ? 1_555 98.6 ? 4 SG ? A CYS 7 ? B CYS 421 ? 1_555 ZN ? E ZN . ? B ZN 601 ? 1_555 SG ? A CYS 27 ? B CYS 441 ? 1_555 101.3 ? 5 SG ? A CYS 10 ? B CYS 424 ? 1_555 ZN ? E ZN . ? B ZN 601 ? 1_555 SG ? A CYS 27 ? B CYS 441 ? 1_555 120.6 ? 6 SG ? A CYS 24 ? B CYS 438 ? 1_555 ZN ? E ZN . ? B ZN 601 ? 1_555 SG ? A CYS 27 ? B CYS 441 ? 1_555 105.8 ? 7 SG ? A CYS 43 ? B CYS 457 ? 1_555 ZN ? F ZN . ? B ZN 602 ? 1_555 SG ? A CYS 49 ? B CYS 463 ? 1_555 111.5 ? 8 SG ? A CYS 43 ? B CYS 457 ? 1_555 ZN ? F ZN . ? B ZN 602 ? 1_555 SG ? A CYS 59 ? B CYS 473 ? 1_555 110.9 ? 9 SG ? A CYS 49 ? B CYS 463 ? 1_555 ZN ? F ZN . ? B ZN 602 ? 1_555 SG ? A CYS 59 ? B CYS 473 ? 1_555 107.6 ? 10 SG ? A CYS 43 ? B CYS 457 ? 1_555 ZN ? F ZN . ? B ZN 602 ? 1_555 SG ? A CYS 62 ? B CYS 476 ? 1_555 109.0 ? 11 SG ? A CYS 49 ? B CYS 463 ? 1_555 ZN ? F ZN . ? B ZN 602 ? 1_555 SG ? A CYS 62 ? B CYS 476 ? 1_555 112.8 ? 12 SG ? A CYS 59 ? B CYS 473 ? 1_555 ZN ? F ZN . ? B ZN 602 ? 1_555 SG ? A CYS 62 ? B CYS 476 ? 1_555 104.9 ? 13 SG ? D CYS 7 ? A CYS 421 ? 1_555 ZN ? H ZN . ? A ZN 602 ? 1_555 SG ? D CYS 10 ? A CYS 424 ? 1_555 114.0 ? 14 SG ? D CYS 7 ? A CYS 421 ? 1_555 ZN ? H ZN . ? A ZN 602 ? 1_555 SG ? D CYS 24 ? A CYS 438 ? 1_555 120.6 ? 15 SG ? D CYS 10 ? A CYS 424 ? 1_555 ZN ? H ZN . ? A ZN 602 ? 1_555 SG ? D CYS 24 ? A CYS 438 ? 1_555 100.2 ? 16 SG ? D CYS 7 ? A CYS 421 ? 1_555 ZN ? H ZN . ? A ZN 602 ? 1_555 SG ? D CYS 27 ? A CYS 441 ? 1_555 106.4 ? 17 SG ? D CYS 10 ? A CYS 424 ? 1_555 ZN ? H ZN . ? A ZN 602 ? 1_555 SG ? D CYS 27 ? A CYS 441 ? 1_555 115.9 ? 18 SG ? D CYS 24 ? A CYS 438 ? 1_555 ZN ? H ZN . ? A ZN 602 ? 1_555 SG ? D CYS 27 ? A CYS 441 ? 1_555 99.3 ? 19 SG ? D CYS 43 ? A CYS 457 ? 1_555 ZN ? G ZN . ? A ZN 601 ? 1_555 SG ? D CYS 49 ? A CYS 463 ? 1_555 103.9 ? 20 SG ? D CYS 43 ? A CYS 457 ? 1_555 ZN ? G ZN . ? A ZN 601 ? 1_555 SG ? D CYS 59 ? A CYS 473 ? 1_555 116.9 ? 21 SG ? D CYS 49 ? A CYS 463 ? 1_555 ZN ? G ZN . ? A ZN 601 ? 1_555 SG ? D CYS 59 ? A CYS 473 ? 1_555 114.8 ? 22 SG ? D CYS 43 ? A CYS 457 ? 1_555 ZN ? G ZN . ? A ZN 601 ? 1_555 SG ? D CYS 62 ? A CYS 476 ? 1_555 108.2 ? 23 SG ? D CYS 49 ? A CYS 463 ? 1_555 ZN ? G ZN . ? A ZN 601 ? 1_555 SG ? D CYS 62 ? A CYS 476 ? 1_555 107.1 ? 24 SG ? D CYS 59 ? A CYS 473 ? 1_555 ZN ? G ZN . ? A ZN 601 ? 1_555 SG ? D CYS 62 ? A CYS 476 ? 1_555 105.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-12-05 2 'Structure model' 1 1 2019-11-27 3 'Structure model' 1 2 2021-08-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Source and taxonomy' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_audit_support 2 3 'Structure model' database_2 3 3 'Structure model' entity_src_gen 4 3 'Structure model' struct_ref 5 3 'Structure model' struct_ref_seq 6 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_audit_support.funding_organization' 2 3 'Structure model' '_database_2.pdbx_DOI' 3 3 'Structure model' '_database_2.pdbx_database_accession' 4 3 'Structure model' '_entity_src_gen.gene_src_common_name' 5 3 'Structure model' '_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id' 6 3 'Structure model' '_entity_src_gen.pdbx_gene_src_scientific_name' 7 3 'Structure model' '_struct_ref.db_code' 8 3 'Structure model' '_struct_ref.pdbx_db_accession' 9 3 'Structure model' '_struct_ref_seq.pdbx_db_accession' 10 3 'Structure model' '_struct_ref_seq_dif.pdbx_seq_db_accession_code' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -65.9272 -73.2393 233.7511 0.8218 0.7631 0.4928 0.0996 -0.0009 0.1172 4.8772 8.5977 2.8903 -1.8985 2.5441 -1.7233 0.1581 -0.8862 0.1548 1.3346 0.4295 0.3776 0.5957 -0.7117 -0.5280 'X-RAY DIFFRACTION' 2 ? refined -57.4324 -69.1849 219.9544 0.4939 0.4964 0.3627 0.0985 0.0091 -0.0803 8.8433 7.8131 9.2154 3.0401 0.4342 -2.0336 -0.1548 -0.0035 -0.5381 0.4203 -0.1480 -0.4077 0.6825 0.7693 0.4344 'X-RAY DIFFRACTION' 3 ? refined -62.7334 -69.1491 227.1599 0.5282 0.3522 0.4273 0.1117 0.0129 0.0156 7.0673 8.3136 9.6607 2.2959 -1.8312 -2.3083 0.4087 -0.0568 0.2330 0.6836 -0.0876 -0.0190 -0.5449 0.0808 -0.2190 'X-RAY DIFFRACTION' 4 ? refined -61.2650 -92.8310 213.4318 2.2468 1.2534 0.9522 0.1033 -0.3797 -0.2986 5.1531 8.0150 2.1984 -2.5847 2.2673 -0.4867 1.3815 0.1983 -2.2594 -0.1683 1.2470 -1.3971 3.9618 -0.5634 -2.4056 'X-RAY DIFFRACTION' 5 ? refined -65.9377 -84.9452 237.6936 0.6109 0.5423 0.5227 -0.0585 -0.1000 0.0678 6.7669 8.8984 5.7545 -0.1088 -0.5722 -6.8415 0.0393 -0.4771 -0.2820 -0.0004 0.5770 0.4420 0.9152 -1.3371 -0.6636 'X-RAY DIFFRACTION' 6 ? refined -67.0685 -83.9986 243.4527 1.0341 0.9144 0.6621 -0.0242 -0.0495 0.2403 6.3643 6.2599 5.9835 -2.2902 2.8875 2.2204 -0.0121 -0.3485 -0.6525 0.2422 0.4822 0.8350 0.3632 -1.6299 -0.4681 'X-RAY DIFFRACTION' 7 ? refined -67.1080 -86.2178 217.1166 1.3000 0.9419 0.6635 -0.1367 -0.3231 0.0366 7.6227 9.5699 5.3653 -3.9977 4.1073 -6.4854 0.9231 1.0010 -0.8563 -0.8155 0.4525 0.2807 2.1112 -1.3426 -1.3864 'X-RAY DIFFRACTION' 8 ? refined -61.5826 -76.5316 196.0488 0.6238 0.6294 0.6769 -0.0406 0.0806 -0.2499 0.1964 4.6984 4.1849 0.2335 -0.5074 0.7373 0.0633 0.5515 -0.8992 -1.0555 0.9530 -1.3871 0.5756 1.7915 -0.6143 'X-RAY DIFFRACTION' 9 ? refined -71.0147 -79.4382 202.6851 0.9062 0.4512 0.7466 -0.0053 0.1030 -0.0198 3.0661 7.1287 6.5377 -4.6382 -2.5150 4.4320 0.3830 -0.6425 -1.3410 0.6113 -0.1373 0.3284 1.0006 0.1207 -0.2963 'X-RAY DIFFRACTION' 10 ? refined -77.7675 -73.6310 209.5377 0.5694 1.0092 0.8642 -0.0659 -0.0189 -0.0447 1.6455 2.8583 7.9132 1.8579 3.4291 4.3595 -1.0980 -2.1195 -0.4631 -0.8703 0.2748 2.9319 0.4073 -1.5263 0.7688 'X-RAY DIFFRACTION' 11 ? refined -66.2637 -63.6218 211.4754 0.6427 0.3909 0.5024 0.0889 -0.0304 0.0363 9.5668 7.7444 8.5055 -4.0790 -5.0654 2.0710 -0.2296 -0.0696 0.5887 0.0227 0.0154 0.0363 -1.1913 0.0591 0.1829 'X-RAY DIFFRACTION' 12 ? refined -59.8794 -72.8044 209.9044 0.6332 0.7270 0.6129 0.1398 -0.0807 -0.0250 1.6877 7.2084 7.4487 -1.1729 -1.3819 4.1266 0.2365 -0.0894 -0.7497 0.8005 0.1652 -0.9954 0.4995 1.7354 -0.4969 'X-RAY DIFFRACTION' 13 ? refined -70.5506 -70.8606 200.6100 0.4804 0.4316 0.4248 -0.0876 0.0202 -0.0376 7.8432 8.6004 9.4510 -5.2625 -1.1120 -2.2676 -0.3690 0.2683 -0.0879 -0.8820 0.1844 -0.2905 -0.8655 0.1159 0.2014 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 419 through 449 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 450 through 464 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 465 through 489 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 0 through 4 ) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 5 through 15 ) ; 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? ;chain 'D' and (resid 1 through 10 ) ; 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? ;chain 'D' and (resid 11 through 16 ) ; 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 419 through 438 ) ; 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 439 through 450 ) ; 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 451 through 455 ) ; 'X-RAY DIFFRACTION' 11 11 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 456 through 465 ) ; 'X-RAY DIFFRACTION' 12 12 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 466 through 473 ) ; 'X-RAY DIFFRACTION' 13 13 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 474 through 489 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.12_2829: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 H22 C DG 13 ? ? O2 D DC 4 ? ? 1.55 2 1 O2 C DC 10 ? ? H22 D DG 7 ? ? 1.55 3 1 O2 C DC 14 ? ? H22 D DG 3 ? ? 1.59 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" C DA 3 ? ? "C3'" C DA 3 ? ? 1.377 1.419 -0.042 0.006 N 2 1 "O3'" C DA 5 ? ? "C3'" C DA 5 ? ? 1.370 1.419 -0.049 0.006 N 3 1 "O3'" C DA 12 ? ? "C3'" C DA 12 ? ? 1.365 1.419 -0.054 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DA 3 ? ? "C1'" C DA 3 ? ? N9 C DA 3 ? ? 110.28 108.30 1.98 0.30 N 2 1 "O3'" C DC 14 ? ? P C DT 15 ? ? OP2 C DT 15 ? ? 118.93 110.50 8.43 1.10 Y 3 1 "O4'" D DG 3 ? ? "C1'" D DG 3 ? ? N9 D DG 3 ? ? 110.14 108.30 1.84 0.30 N 4 1 "O4'" D DT 5 ? ? "C1'" D DT 5 ? ? N1 D DT 5 ? ? 110.50 108.30 2.20 0.30 N 5 1 "O4'" D DA 6 ? ? "C1'" D DA 6 ? ? N9 D DA 6 ? ? 110.83 108.30 2.53 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER B 425 ? ? 78.32 -7.07 2 1 ARG B 460 ? ? -142.65 31.93 3 1 ASP B 462 ? ? -156.65 16.58 4 1 ARG B 469 ? ? -56.59 -7.64 5 1 GLU A 427 ? ? -68.94 82.31 6 1 ALA A 428 ? ? -30.23 140.18 7 1 ASN A 454 ? ? -75.27 43.80 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B HIS 417 ? CG ? A HIS 3 CG 2 1 Y 1 B HIS 417 ? ND1 ? A HIS 3 ND1 3 1 Y 1 B HIS 417 ? CD2 ? A HIS 3 CD2 4 1 Y 1 B HIS 417 ? CE1 ? A HIS 3 CE1 5 1 Y 1 B HIS 417 ? NE2 ? A HIS 3 NE2 6 1 Y 1 B MET 418 ? CG ? A MET 4 CG 7 1 Y 1 B MET 418 ? SD ? A MET 4 SD 8 1 Y 1 B MET 418 ? CE ? A MET 4 CE 9 1 Y 1 B LYS 419 ? CG ? A LYS 5 CG 10 1 Y 1 B LYS 419 ? CD ? A LYS 5 CD 11 1 Y 1 B LYS 419 ? CE ? A LYS 5 CE 12 1 Y 1 B LYS 419 ? NZ ? A LYS 5 NZ 13 1 Y 1 C DT 0 ? "O5'" ? B DT 1 "O5'" 14 1 Y 1 A MET 417 ? CG ? D MET 4 CG 15 1 Y 1 A MET 417 ? SD ? D MET 4 SD 16 1 Y 1 A MET 417 ? CE ? D MET 4 CE 17 1 Y 1 A LYS 419 ? CG ? D LYS 5 CG 18 1 Y 1 A LYS 419 ? CD ? D LYS 5 CD 19 1 Y 1 A LYS 419 ? CE ? D LYS 5 CE 20 1 Y 1 A LYS 419 ? NZ ? D LYS 5 NZ 21 1 Y 1 A GLU 489 ? CG ? D GLU 75 CG 22 1 Y 1 A GLU 489 ? CD ? D GLU 75 CD 23 1 Y 1 A GLU 489 ? OE1 ? D GLU 75 OE1 24 1 Y 1 A GLU 489 ? OE2 ? D GLU 75 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B GLY 415 ? A GLY 1 2 1 Y 1 B SER 416 ? A SER 2 3 1 Y 1 B ALA 490 ? A ALA 76 4 1 Y 1 B ARG 491 ? A ARG 77 5 1 Y 1 B LYS 492 ? A LYS 78 6 1 Y 1 B THR 493 ? A THR 79 7 1 Y 1 B LYS 494 ? A LYS 80 8 1 Y 1 B LYS 495 ? A LYS 81 9 1 Y 1 B LYS 496 ? A LYS 82 10 1 Y 1 B ILE 497 ? A ILE 83 11 1 Y 1 B LYS 498 ? A LYS 84 12 1 Y 1 B GLY 499 ? A GLY 85 13 1 Y 1 B ILE 500 ? A ILE 86 14 1 Y 1 B GLN 501 ? A GLN 87 15 1 Y 1 B GLN 502 ? A GLN 88 16 1 Y 1 B ALA 503 ? A ALA 89 17 1 Y 1 B THR 504 ? A THR 90 18 1 Y 1 B THR 505 ? A THR 91 19 1 Y 1 A GLY 414 ? D GLY 1 20 1 Y 1 A SER 415 ? D SER 2 21 1 Y 1 A HIS 416 ? D HIS 3 22 1 Y 1 A ALA 490 ? D ALA 76 23 1 Y 1 A ARG 491 ? D ARG 77 24 1 Y 1 A LYS 492 ? D LYS 78 25 1 Y 1 A THR 493 ? D THR 79 26 1 Y 1 A LYS 494 ? D LYS 80 27 1 Y 1 A LYS 495 ? D LYS 81 28 1 Y 1 A LYS 496 ? D LYS 82 29 1 Y 1 A ILE 497 ? D ILE 83 30 1 Y 1 A LYS 498 ? D LYS 84 31 1 Y 1 A GLY 499 ? D GLY 85 32 1 Y 1 A ILE 500 ? D ILE 86 33 1 Y 1 A GLN 501 ? D GLN 87 34 1 Y 1 A GLN 502 ? D GLN 88 35 1 Y 1 A ALA 503 ? D ALA 89 36 1 Y 1 A THR 504 ? D THR 90 37 1 Y 1 A THR 505 ? D THR 91 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6BSF 'double helix' 6BSF 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 2 1_555 C DC 16 1_555 -0.252 0.110 0.015 -3.829 -5.710 3.025 1 C_DG1:DC16_D C 1 ? D 16 ? 19 1 1 B DC 3 1_555 C DG 15 1_555 0.276 -0.083 -0.098 4.841 -3.358 2.512 2 C_DC2:DG15_D C 2 ? D 15 ? 19 1 1 B DA 4 1_555 C DT 14 1_555 0.441 -0.122 0.116 7.816 -9.078 3.993 3 C_DA3:DT14_D C 3 ? D 14 ? 20 1 1 B DA 5 1_555 C DT 13 1_555 0.059 -0.179 0.530 15.978 -24.343 1.932 4 C_DA4:DT13_D C 4 ? D 13 ? 20 1 1 B DA 6 1_555 C DT 12 1_555 -0.081 -0.339 0.174 7.071 -19.258 2.426 5 C_DA5:DT12_D C 5 ? D 12 ? 20 1 1 B DT 7 1_555 C DA 11 1_555 0.164 -0.220 0.092 -1.420 -14.825 1.724 6 C_DT6:DA11_D C 6 ? D 11 ? 20 1 1 B DG 8 1_555 C DC 10 1_555 -0.624 -0.117 -0.212 -8.623 -8.186 5.960 7 C_DG7:DC10_D C 7 ? D 10 ? 19 1 1 B DT 9 1_555 C DA 9 1_555 -0.197 -0.294 0.024 -0.556 -10.045 5.972 8 C_DT8:DA9_D C 8 ? D 9 ? 20 1 1 B DA 10 1_555 C DT 8 1_555 -0.193 -0.407 0.059 1.190 -5.830 1.753 9 C_DA9:DT8_D C 9 ? D 8 ? 20 1 1 B DC 11 1_555 C DG 7 1_555 0.471 -0.386 0.347 2.802 -18.099 4.708 10 C_DC10:DG7_D C 10 ? D 7 ? 19 1 1 B DT 12 1_555 C DA 6 1_555 0.048 -0.328 0.174 -4.490 -11.469 -2.988 11 C_DT11:DA6_D C 11 ? D 6 ? 20 1 1 B DA 13 1_555 C DT 5 1_555 0.055 -0.240 -0.075 -9.175 3.499 0.450 12 C_DA12:DT5_D C 12 ? D 5 ? 20 1 1 B DG 14 1_555 C DC 4 1_555 -0.557 -0.120 -0.029 4.748 -6.745 10.478 13 C_DG13:DC4_D C 13 ? D 4 ? 19 1 1 B DC 15 1_555 C DG 3 1_555 0.064 -0.257 0.355 -2.684 -5.673 4.828 14 C_DC14:DG3_D C 14 ? D 3 ? 19 1 1 B DT 16 1_555 C DA 2 1_555 -0.283 -0.349 -0.398 12.330 -0.053 5.064 15 C_DT15:DA2_D C 15 ? D 2 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 2 1_555 C DC 16 1_555 B DC 3 1_555 C DG 15 1_555 -0.035 -0.227 3.124 1.517 3.405 37.343 -0.777 0.243 3.089 5.301 -2.362 37.522 1 CC_DG1DC2:DG15DC16_DD C 1 ? D 16 ? C 2 ? D 15 ? 1 B DC 3 1_555 C DG 15 1_555 B DA 4 1_555 C DT 14 1_555 0.033 -0.590 3.314 -0.596 3.453 29.143 -1.910 -0.194 3.222 6.832 1.179 29.348 2 CC_DC2DA3:DT14DG15_DD C 2 ? D 15 ? C 3 ? D 14 ? 1 B DA 4 1_555 C DT 14 1_555 B DA 5 1_555 C DT 13 1_555 -0.598 -0.340 3.020 -3.696 -3.308 33.522 -0.084 0.468 3.085 -5.696 6.365 33.877 3 CC_DA3DA4:DT13DT14_DD C 3 ? D 14 ? C 4 ? D 13 ? 1 B DA 5 1_555 C DT 13 1_555 B DA 6 1_555 C DT 12 1_555 -0.061 -0.714 3.424 3.101 -1.245 36.810 -0.951 0.534 3.430 -1.967 -4.898 36.956 4 CC_DA4DA5:DT12DT13_DD C 4 ? D 13 ? C 5 ? D 12 ? 1 B DA 6 1_555 C DT 12 1_555 B DT 7 1_555 C DA 11 1_555 0.333 -0.704 3.414 0.898 -4.155 34.798 -0.510 -0.410 3.480 -6.915 -1.495 35.049 5 CC_DA5DT6:DA11DT12_DD C 5 ? D 12 ? C 6 ? D 11 ? 1 B DT 7 1_555 C DA 11 1_555 B DG 8 1_555 C DC 10 1_555 0.297 -0.602 3.401 3.375 10.197 29.547 -3.059 0.096 3.045 19.213 -6.360 31.398 6 CC_DT6DG7:DC10DA11_DD C 6 ? D 11 ? C 7 ? D 10 ? 1 B DG 8 1_555 C DC 10 1_555 B DT 9 1_555 C DA 9 1_555 -0.438 -0.097 3.104 -0.534 -5.669 39.823 0.471 0.580 3.094 -8.271 0.779 40.212 7 CC_DG7DT8:DA9DC10_DD C 7 ? D 10 ? C 8 ? D 9 ? 1 B DT 9 1_555 C DA 9 1_555 B DA 10 1_555 C DT 8 1_555 0.294 0.510 3.358 0.274 0.377 36.835 0.754 -0.427 3.365 0.597 -0.433 36.838 8 CC_DT8DA9:DT8DA9_DD C 8 ? D 9 ? C 9 ? D 8 ? 1 B DA 10 1_555 C DT 8 1_555 B DC 11 1_555 C DG 7 1_555 0.185 -0.422 3.335 -2.972 -2.776 35.707 -0.278 -0.733 3.332 -4.509 4.827 35.930 9 CC_DA9DC10:DG7DT8_DD C 9 ? D 8 ? C 10 ? D 7 ? 1 B DC 11 1_555 C DG 7 1_555 B DT 12 1_555 C DA 6 1_555 -0.728 -0.515 3.487 2.285 1.823 33.144 -1.220 1.674 3.398 3.188 -3.996 33.269 10 CC_DC10DT11:DA6DG7_DD C 10 ? D 7 ? C 11 ? D 6 ? 1 B DT 12 1_555 C DA 6 1_555 B DA 13 1_555 C DT 5 1_555 0.217 0.094 3.422 -0.905 -1.982 42.112 0.344 -0.400 3.409 -2.756 1.259 42.166 11 CC_DT11DA12:DT5DA6_DD C 11 ? D 6 ? C 12 ? D 5 ? 1 B DA 13 1_555 C DT 5 1_555 B DG 14 1_555 C DC 4 1_555 0.807 -0.465 3.125 -2.220 8.696 22.905 -3.555 -2.523 2.681 20.896 5.333 24.579 12 CC_DA12DG13:DC4DT5_DD C 12 ? D 5 ? C 13 ? D 4 ? 1 B DG 14 1_555 C DC 4 1_555 B DC 15 1_555 C DG 3 1_555 -0.478 -0.671 3.413 -4.691 0.504 36.424 -1.138 0.085 3.437 0.803 7.466 36.718 13 CC_DG13DC14:DG3DC4_DD C 13 ? D 4 ? C 14 ? D 3 ? 1 B DC 15 1_555 C DG 3 1_555 B DT 16 1_555 C DA 2 1_555 -0.110 -0.759 2.949 4.869 3.233 27.486 -2.238 1.242 2.782 6.709 -10.104 28.089 14 CC_DC14DT15:DA2DG3_DD C 14 ? D 3 ? C 15 ? D 2 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Science Foundation (NSF, United States)' 'United States' 'CAREER grant 1552862' 1 'National Institutes of Health/National Cancer Institute (NIH/NCI)' 'United States' 'K99/R00 CA149088' 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'native gel electrophoresis' _pdbx_struct_assembly_auth_evidence.details ? #