data_6C5J # _entry.id 6C5J # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6C5J pdb_00006c5j 10.2210/pdb6c5j/pdb WWPDB D_1000232092 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'Related antibody' 6C5H unspecified PDB 'Related antibody' 6C5I unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6C5J _pdbx_database_status.recvd_initial_deposition_date 2018-01-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Haji-Ghassemi, O.' 1 ? 'Evans, S.V.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biochemistry _citation.journal_id_ASTM BICHAW _citation.journal_id_CSD 0033 _citation.journal_id_ISSN 1520-4995 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 58 _citation.language ? _citation.page_first 714 _citation.page_last 726 _citation.title ;Subtle Changes in the Combining Site of the Chlamydiaceae-Specific mAb S25-23 Increase the Antibody-Carbohydrate Binding Affinity by an Order of Magnitude. ; _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.biochem.8b00318 _citation.pdbx_database_id_PubMed 30571096 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Haji-Ghassemi, O.' 1 ? primary 'Muller-Loennies, S.' 2 ? primary 'Brooks, C.L.' 3 ? primary 'MacKenzie, C.R.' 4 ? primary 'Caveney, N.' 5 ? primary 'Van Petegem, F.' 6 ? primary 'Brade, L.' 7 ? primary 'Kosma, P.' 8 ? primary 'Brade, H.' 9 ? primary 'Evans, S.V.' 10 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 105.310 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6C5J _cell.details ? _cell.formula_units_Z ? _cell.length_a 116.233 _cell.length_a_esd ? _cell.length_b 45.453 _cell.length_b_esd ? _cell.length_c 75.671 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6C5J _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'IgG1 Fab Heavy Chain' 23475.457 1 ? ? ? ? 2 polymer nat 'IgG1 Fab Light Chain (Kappa)' 24180.895 1 ? ? ? ? 3 branched man ;3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-8)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-4)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-6)-2-amino-2-deoxy-4-O-phosphono-beta-D-glucopyranose-(1-6)-2-amino-2-deoxy-1-O-phosphono-alpha-D-glucopyranose ; 1160.817 1 ? ? ? ? 4 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 5 water nat water 18.015 34 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;EVQLQESGPGLVQPSQSLSITCTVSGFSLTTYGVHWVRQSPGKGLEWLGVIWSGGTTEYNAAFISRLSISKDNSKSQVFF KMNSLQTNDTAIYFCVRMRITTDWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWN SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR ; ;EVQLQESGPGLVQPSQSLSITCTVSGFSLTTYGVHWVRQSPGKGLEWLGVIWSGGTTEYNAAFISRLSISKDNSKSQVFF KMNSLQTNDTAIYFCVRMRITTDWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWN SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR ; H ? 2 'polypeptide(L)' no no ;DVLMTQTPLSLPVSLGDQASISCRSSQTIVHKNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKI SRVEAADLGVYYCFQGSHVPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC ; ;DVLMTQTPLSLPVSLGDQASISCRSSQTIVHKNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKI SRVEAADLGVYYCFQGSHVPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC ; L ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 VAL n 1 3 GLN n 1 4 LEU n 1 5 GLN n 1 6 GLU n 1 7 SER n 1 8 GLY n 1 9 PRO n 1 10 GLY n 1 11 LEU n 1 12 VAL n 1 13 GLN n 1 14 PRO n 1 15 SER n 1 16 GLN n 1 17 SER n 1 18 LEU n 1 19 SER n 1 20 ILE n 1 21 THR n 1 22 CYS n 1 23 THR n 1 24 VAL n 1 25 SER n 1 26 GLY n 1 27 PHE n 1 28 SER n 1 29 LEU n 1 30 THR n 1 31 THR n 1 32 TYR n 1 33 GLY n 1 34 VAL n 1 35 HIS n 1 36 TRP n 1 37 VAL n 1 38 ARG n 1 39 GLN n 1 40 SER n 1 41 PRO n 1 42 GLY n 1 43 LYS n 1 44 GLY n 1 45 LEU n 1 46 GLU n 1 47 TRP n 1 48 LEU n 1 49 GLY n 1 50 VAL n 1 51 ILE n 1 52 TRP n 1 53 SER n 1 54 GLY n 1 55 GLY n 1 56 THR n 1 57 THR n 1 58 GLU n 1 59 TYR n 1 60 ASN n 1 61 ALA n 1 62 ALA n 1 63 PHE n 1 64 ILE n 1 65 SER n 1 66 ARG n 1 67 LEU n 1 68 SER n 1 69 ILE n 1 70 SER n 1 71 LYS n 1 72 ASP n 1 73 ASN n 1 74 SER n 1 75 LYS n 1 76 SER n 1 77 GLN n 1 78 VAL n 1 79 PHE n 1 80 PHE n 1 81 LYS n 1 82 MET n 1 83 ASN n 1 84 SER n 1 85 LEU n 1 86 GLN n 1 87 THR n 1 88 ASN n 1 89 ASP n 1 90 THR n 1 91 ALA n 1 92 ILE n 1 93 TYR n 1 94 PHE n 1 95 CYS n 1 96 VAL n 1 97 ARG n 1 98 MET n 1 99 ARG n 1 100 ILE n 1 101 THR n 1 102 THR n 1 103 ASP n 1 104 TRP n 1 105 PHE n 1 106 ALA n 1 107 TYR n 1 108 TRP n 1 109 GLY n 1 110 GLN n 1 111 GLY n 1 112 THR n 1 113 LEU n 1 114 VAL n 1 115 THR n 1 116 VAL n 1 117 SER n 1 118 ALA n 1 119 ALA n 1 120 LYS n 1 121 THR n 1 122 THR n 1 123 PRO n 1 124 PRO n 1 125 SER n 1 126 VAL n 1 127 TYR n 1 128 PRO n 1 129 LEU n 1 130 ALA n 1 131 PRO n 1 132 GLY n 1 133 SER n 1 134 ALA n 1 135 ALA n 1 136 GLN n 1 137 THR n 1 138 ASN n 1 139 SER n 1 140 MET n 1 141 VAL n 1 142 THR n 1 143 LEU n 1 144 GLY n 1 145 CYS n 1 146 LEU n 1 147 VAL n 1 148 LYS n 1 149 GLY n 1 150 TYR n 1 151 PHE n 1 152 PRO n 1 153 GLU n 1 154 PRO n 1 155 VAL n 1 156 THR n 1 157 VAL n 1 158 THR n 1 159 TRP n 1 160 ASN n 1 161 SER n 1 162 GLY n 1 163 SER n 1 164 LEU n 1 165 SER n 1 166 SER n 1 167 GLY n 1 168 VAL n 1 169 HIS n 1 170 THR n 1 171 PHE n 1 172 PRO n 1 173 ALA n 1 174 VAL n 1 175 LEU n 1 176 GLN n 1 177 SER n 1 178 ASP n 1 179 LEU n 1 180 TYR n 1 181 THR n 1 182 LEU n 1 183 SER n 1 184 SER n 1 185 SER n 1 186 VAL n 1 187 THR n 1 188 VAL n 1 189 PRO n 1 190 SER n 1 191 SER n 1 192 THR n 1 193 TRP n 1 194 PRO n 1 195 SER n 1 196 GLU n 1 197 THR n 1 198 VAL n 1 199 THR n 1 200 CYS n 1 201 ASN n 1 202 VAL n 1 203 ALA n 1 204 HIS n 1 205 PRO n 1 206 ALA n 1 207 SER n 1 208 SER n 1 209 THR n 1 210 LYS n 1 211 VAL n 1 212 ASP n 1 213 LYS n 1 214 LYS n 1 215 ILE n 1 216 VAL n 1 217 PRO n 1 218 ARG n 2 1 ASP n 2 2 VAL n 2 3 LEU n 2 4 MET n 2 5 THR n 2 6 GLN n 2 7 THR n 2 8 PRO n 2 9 LEU n 2 10 SER n 2 11 LEU n 2 12 PRO n 2 13 VAL n 2 14 SER n 2 15 LEU n 2 16 GLY n 2 17 ASP n 2 18 GLN n 2 19 ALA n 2 20 SER n 2 21 ILE n 2 22 SER n 2 23 CYS n 2 24 ARG n 2 25 SER n 2 26 SER n 2 27 GLN n 2 28 THR n 2 29 ILE n 2 30 VAL n 2 31 HIS n 2 32 LYS n 2 33 ASN n 2 34 GLY n 2 35 ASN n 2 36 THR n 2 37 TYR n 2 38 LEU n 2 39 GLU n 2 40 TRP n 2 41 TYR n 2 42 LEU n 2 43 GLN n 2 44 LYS n 2 45 PRO n 2 46 GLY n 2 47 GLN n 2 48 SER n 2 49 PRO n 2 50 LYS n 2 51 LEU n 2 52 LEU n 2 53 ILE n 2 54 TYR n 2 55 LYS n 2 56 VAL n 2 57 SER n 2 58 ASN n 2 59 ARG n 2 60 PHE n 2 61 SER n 2 62 GLY n 2 63 VAL n 2 64 PRO n 2 65 ASP n 2 66 ARG n 2 67 PHE n 2 68 SER n 2 69 GLY n 2 70 SER n 2 71 GLY n 2 72 SER n 2 73 GLY n 2 74 THR n 2 75 ASP n 2 76 PHE n 2 77 THR n 2 78 LEU n 2 79 LYS n 2 80 ILE n 2 81 SER n 2 82 ARG n 2 83 VAL n 2 84 GLU n 2 85 ALA n 2 86 ALA n 2 87 ASP n 2 88 LEU n 2 89 GLY n 2 90 VAL n 2 91 TYR n 2 92 TYR n 2 93 CYS n 2 94 PHE n 2 95 GLN n 2 96 GLY n 2 97 SER n 2 98 HIS n 2 99 VAL n 2 100 PRO n 2 101 TYR n 2 102 THR n 2 103 PHE n 2 104 GLY n 2 105 GLY n 2 106 GLY n 2 107 THR n 2 108 LYS n 2 109 LEU n 2 110 GLU n 2 111 ILE n 2 112 LYS n 2 113 ARG n 2 114 ALA n 2 115 ASP n 2 116 ALA n 2 117 ALA n 2 118 PRO n 2 119 THR n 2 120 VAL n 2 121 SER n 2 122 ILE n 2 123 PHE n 2 124 PRO n 2 125 PRO n 2 126 SER n 2 127 SER n 2 128 GLU n 2 129 GLN n 2 130 LEU n 2 131 THR n 2 132 SER n 2 133 GLY n 2 134 GLY n 2 135 ALA n 2 136 SER n 2 137 VAL n 2 138 VAL n 2 139 CYS n 2 140 PHE n 2 141 LEU n 2 142 ASN n 2 143 ASN n 2 144 PHE n 2 145 TYR n 2 146 PRO n 2 147 LYS n 2 148 ASP n 2 149 ILE n 2 150 ASN n 2 151 VAL n 2 152 LYS n 2 153 TRP n 2 154 LYS n 2 155 ILE n 2 156 ASP n 2 157 GLY n 2 158 SER n 2 159 GLU n 2 160 ARG n 2 161 GLN n 2 162 ASN n 2 163 GLY n 2 164 VAL n 2 165 LEU n 2 166 ASN n 2 167 SER n 2 168 TRP n 2 169 THR n 2 170 ASP n 2 171 GLN n 2 172 ASP n 2 173 SER n 2 174 LYS n 2 175 ASP n 2 176 SER n 2 177 THR n 2 178 TYR n 2 179 SER n 2 180 MET n 2 181 SER n 2 182 SER n 2 183 THR n 2 184 LEU n 2 185 THR n 2 186 LEU n 2 187 THR n 2 188 LYS n 2 189 ASP n 2 190 GLU n 2 191 TYR n 2 192 GLU n 2 193 ARG n 2 194 HIS n 2 195 ASN n 2 196 SER n 2 197 TYR n 2 198 THR n 2 199 CYS n 2 200 GLU n 2 201 ALA n 2 202 THR n 2 203 HIS n 2 204 LYS n 2 205 THR n 2 206 SER n 2 207 THR n 2 208 SER n 2 209 PRO n 2 210 ILE n 2 211 VAL n 2 212 LYS n 2 213 SER n 2 214 PHE n 2 215 ASN n 2 216 ARG n 2 217 ASN n 2 218 GLU n 2 219 CYS n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample 1 104 Mouse 'Mus musculus' 10090 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 2 sample 105 218 Mouse 'Mus musculus' 10090 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 1 101 Mouse 'Mus musculus' 10090 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 2 sample 102 219 Mouse 'Mus musculus' 10090 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 6C5J 6C5J ? 1 ? 1 2 UNP Q99LC4_MOUSE Q99LC4 ? 1 ;FAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSS SVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR ; 126 3 PDB 6C5J 6C5J ? 2 ? 1 4 UNP A0A0F7R5U8_MOUSE A0A0F7R5U8 ? 2 ;TFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMS STLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC ; 122 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6C5J H 1 ? 104 A 6C5J 1 ? 100 ? 1 100 2 2 6C5J H 105 B 218 ? Q99LC4 126 ? 239 ? 100 213 3 3 6C5J L 1 ? 101 ? 6C5J 1 ? 96 ? 1 96 4 4 6C5J L 102 ? 219 ? A0A0F7R5U8 122 ? 239 ? 97 214 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GP1 D-saccharide n 2-amino-2-deoxy-1-O-phosphono-alpha-D-glucopyranose ;GLUCOSAMINE 1-PHOSPHATE; 1-O-phosphono-alpha-D-glucosamine; 2-amino-2-deoxy-1-O-phosphono-alpha-D-glucose; 2-amino-2-deoxy-1-O-phosphono-D-glucose; 2-amino-2-deoxy-1-O-phosphono-glucose ; 'C6 H14 N O8 P' 259.151 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 KDO 'D-saccharide, alpha linking' . '3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid' ;3-deoxy-d-manno-oct-2-ulopyranosonic acid; 2-keto-3-deoxy-D-mannooctanoic acid; 3-deoxy-alpha-D-manno-oct-2-ulosonic acid; 3-deoxy-D-manno-oct-2-ulosonic acid; 3-deoxy-manno-oct-2-ulosonic acid ; 'C8 H14 O8' 238.192 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 Z9M 'D-saccharide, beta linking' n 2-amino-2-deoxy-4-O-phosphono-beta-D-glucopyranose ;4-O-phosphono-beta-D-glucosamine; 2-amino-2-deoxy-4-O-phosphono-beta-D-glucose; 2-amino-2-deoxy-4-O-phosphono-D-glucose; 2-amino-2-deoxy-4-O-phosphono-glucose ; 'C6 H14 N O8 P' 259.151 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6C5J _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.02 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 39.19 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 289.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.1 M MES, 20% [w/v] polyethylene glycol [PEG] 10000 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details DCM _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-06-05 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'CLSI BEAMLINE 08ID-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 08ID-1 _diffrn_source.pdbx_synchrotron_site CLSI # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6C5J _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.290 _reflns.d_resolution_low 25.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 16502 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 93.800 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.400 _reflns.pdbx_Rmerge_I_obs 0.069 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.900 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.024 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.290 2.370 ? ? ? ? ? ? 1700 96.700 ? ? ? ? 0.519 ? ? ? ? ? ? ? ? 3.300 ? 0.960 ? ? ? ? ? 1 1 ? ? 2.370 2.470 ? ? ? ? ? ? 1665 96.500 ? ? ? ? 0.427 ? ? ? ? ? ? ? ? 3.300 ? 0.990 ? ? ? ? ? 2 1 ? ? 2.470 2.580 ? ? ? ? ? ? 1682 96.900 ? ? ? ? 0.321 ? ? ? ? ? ? ? ? 3.300 ? 0.965 ? ? ? ? ? 3 1 ? ? 2.580 2.710 ? ? ? ? ? ? 1711 97.400 ? ? ? ? 0.216 ? ? ? ? ? ? ? ? 3.400 ? 1.011 ? ? ? ? ? 4 1 ? ? 2.710 2.880 ? ? ? ? ? ? 1699 97.500 ? ? ? ? 0.154 ? ? ? ? ? ? ? ? 3.400 ? 1.012 ? ? ? ? ? 5 1 ? ? 2.880 3.110 ? ? ? ? ? ? 1663 95.000 ? ? ? ? 0.102 ? ? ? ? ? ? ? ? 3.400 ? 1.067 ? ? ? ? ? 6 1 ? ? 3.110 3.420 ? ? ? ? ? ? 1637 93.900 ? ? ? ? 0.071 ? ? ? ? ? ? ? ? 3.400 ? 1.078 ? ? ? ? ? 7 1 ? ? 3.420 3.910 ? ? ? ? ? ? 1617 91.000 ? ? ? ? 0.051 ? ? ? ? ? ? ? ? 3.400 ? 0.999 ? ? ? ? ? 8 1 ? ? 3.910 4.920 ? ? ? ? ? ? 1582 89.500 ? ? ? ? 0.041 ? ? ? ? ? ? ? ? 3.400 ? 1.000 ? ? ? ? ? 9 1 ? ? 4.920 25.000 ? ? ? ? ? ? 1546 84.500 ? ? ? ? 0.051 ? ? ? ? ? ? ? ? 3.500 ? 1.165 ? ? ? ? ? 10 1 ? ? # _refine.aniso_B[1][1] -0.7400 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 3.3600 _refine.aniso_B[2][2] -1.9500 _refine.aniso_B[2][3] -0.0000 _refine.aniso_B[3][3] 0.7400 _refine.B_iso_max 124.780 _refine.B_iso_mean 53.0650 _refine.B_iso_min 31.940 _refine.correlation_coeff_Fo_to_Fc 0.9580 _refine.correlation_coeff_Fo_to_Fc_free 0.9440 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6C5J _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.2900 _refine.ls_d_res_low 25.0000 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 15554 _refine.ls_number_reflns_R_free 806 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 93.6800 _refine.ls_percent_reflns_R_free 4.9000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1955 _refine.ls_R_factor_R_free 0.2391 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1933 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4M7J _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.6500 _refine.pdbx_overall_ESU_R_Free 0.2680 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 8.4600 _refine.overall_SU_ML 0.2000 _refine.overall_SU_R_Cruickshank_DPI 0.6504 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.2900 _refine_hist.d_res_low 25.0000 _refine_hist.pdbx_number_atoms_ligand 90 _refine_hist.number_atoms_solvent 34 _refine_hist.number_atoms_total 3456 _refine_hist.pdbx_number_residues_total 435 _refine_hist.pdbx_B_iso_mean_ligand 66.70 _refine_hist.pdbx_B_iso_mean_solvent 48.65 _refine_hist.pdbx_number_atoms_protein 3332 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.009 0.020 3515 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 3103 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.447 1.969 4808 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.923 3.009 7259 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 7.303 5.000 433 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 36.554 24.167 132 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 17.265 15.000 540 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 16.445 15.000 13 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.078 0.200 563 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 0.021 3792 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 688 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.2900 _refine_ls_shell.d_res_low 2.3490 _refine_ls_shell.number_reflns_all 1202 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 76 _refine_ls_shell.number_reflns_R_work 1126 _refine_ls_shell.percent_reflns_obs 96.3900 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3440 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2740 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6C5J _struct.title 'S25-23 Fab in complex with Chlamydiaceae LPS (Crystal form 1)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6C5J _struct_keywords.text 'Carbohydrate, Lipopolysaccharide, Antibody, Antigen, Complex, Chlamydia, SUGAR BINDING PROTEIN, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM, SUGAR BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA A 61 ? SER A 65 ? ALA H 61 SER H 65 5 ? 5 HELX_P HELX_P2 AA2 GLN A 86 ? THR A 90 ? GLN H 83 THR H 87 5 ? 5 HELX_P HELX_P3 AA3 GLY A 132 ? ALA A 134 ? GLY H 127 ALA H 129 5 ? 3 HELX_P HELX_P4 AA4 SER A 161 ? SER A 163 ? SER H 156 SER H 158 5 ? 3 HELX_P HELX_P5 AA5 SER A 191 ? GLU A 196 ? SER H 186 GLU H 191 1 ? 6 HELX_P HELX_P6 AA6 PRO A 205 ? SER A 208 ? PRO H 200 SER H 203 5 ? 4 HELX_P HELX_P7 AA7 GLU B 84 ? LEU B 88 ? GLU L 79 LEU L 83 5 ? 5 HELX_P HELX_P8 AA8 SER B 126 ? SER B 132 ? SER L 121 SER L 127 1 ? 7 HELX_P HELX_P9 AA9 LYS B 188 ? ARG B 193 ? LYS L 183 ARG L 188 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 95 SG ? ? H CYS 22 H CYS 92 1_555 ? ? ? ? ? ? ? 2.061 ? ? disulf2 disulf ? ? A CYS 145 SG ? ? ? 1_555 A CYS 200 SG ? ? H CYS 140 H CYS 195 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf3 disulf ? ? B CYS 23 SG ? ? ? 1_555 B CYS 93 SG ? ? L CYS 23 L CYS 88 1_555 ? ? ? ? ? ? ? 2.052 ? ? disulf4 disulf ? ? B CYS 139 SG ? ? ? 1_555 B CYS 199 SG ? ? L CYS 134 L CYS 194 1_555 ? ? ? ? ? ? ? 2.041 ? ? covale1 covale one ? A ASN 88 ND2 ? ? ? 1_555 D NAG . C1 ? ? H ASN 85 H NAG 301 1_555 ? ? ? ? ? ? ? 1.440 ? N-Glycosylation covale2 covale both ? C GP1 . O6 ? ? ? 1_555 C Z9M . C1 ? ? A GP1 1 A Z9M 2 1_555 ? ? ? ? ? ? ? 1.428 ? ? covale3 covale both ? C Z9M . O6 ? ? ? 1_555 C KDO . C2 ? ? A Z9M 2 A KDO 3 1_555 ? ? ? ? ? ? ? 1.427 ? ? covale4 covale both ? C KDO . O4 ? ? ? 1_555 C KDO . C2 ? ? A KDO 3 A KDO 4 1_555 ? ? ? ? ? ? ? 1.431 ? ? covale5 covale both ? C KDO . O8 ? ? ? 1_555 C KDO . C2 ? ? A KDO 4 A KDO 5 1_555 ? ? ? ? ? ? ? 1.414 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PHE 151 A . ? PHE 146 H PRO 152 A ? PRO 147 H 1 1.66 2 GLU 153 A . ? GLU 148 H PRO 154 A ? PRO 149 H 1 1.19 3 THR 7 B . ? THR 7 L PRO 8 B ? PRO 8 L 1 -5.97 4 VAL 99 B . ? VAL 94 L PRO 100 B ? PRO 95 L 1 -4.23 5 TYR 145 B . ? TYR 140 L PRO 146 B ? PRO 141 L 1 -0.03 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 6 ? AA3 ? 4 ? AA4 ? 4 ? AA5 ? 4 ? AA6 ? 3 ? AA7 ? 4 ? AA8 ? 6 ? AA9 ? 4 ? AB1 ? 4 ? AB2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA8 1 2 ? parallel AA8 2 3 ? anti-parallel AA8 3 4 ? anti-parallel AA8 4 5 ? anti-parallel AA8 5 6 ? anti-parallel AA9 1 2 ? parallel AA9 2 3 ? anti-parallel AA9 3 4 ? anti-parallel AB1 1 2 ? anti-parallel AB1 2 3 ? anti-parallel AB1 3 4 ? anti-parallel AB2 1 2 ? anti-parallel AB2 2 3 ? anti-parallel AB2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 3 ? SER A 7 ? GLN H 3 SER H 7 AA1 2 LEU A 18 ? SER A 25 ? LEU H 18 SER H 25 AA1 3 GLN A 77 ? MET A 82 ? GLN H 77 MET H 82 AA1 4 LEU A 67 ? ASP A 72 ? LEU H 67 ASP H 72 AA2 1 LEU A 11 ? VAL A 12 ? LEU H 11 VAL H 12 AA2 2 THR A 112 ? VAL A 116 ? THR H 107 VAL H 111 AA2 3 ALA A 91 ? ARG A 97 ? ALA H 88 ARG H 94 AA2 4 VAL A 34 ? SER A 40 ? VAL H 34 SER H 40 AA2 5 GLY A 44 ? ILE A 51 ? GLY H 44 ILE H 51 AA2 6 THR A 57 ? TYR A 59 ? THR H 57 TYR H 59 AA3 1 LEU A 11 ? VAL A 12 ? LEU H 11 VAL H 12 AA3 2 THR A 112 ? VAL A 116 ? THR H 107 VAL H 111 AA3 3 ALA A 91 ? ARG A 97 ? ALA H 88 ARG H 94 AA3 4 TYR A 107 ? TRP A 108 ? TYR H 102 TRP H 103 AA4 1 SER A 125 ? LEU A 129 ? SER H 120 LEU H 124 AA4 2 MET A 140 ? TYR A 150 ? MET H 135 TYR H 145 AA4 3 LEU A 179 ? PRO A 189 ? LEU H 174 PRO H 184 AA4 4 VAL A 168 ? THR A 170 ? VAL H 163 THR H 165 AA5 1 GLN A 136 ? THR A 137 ? GLN H 131 THR H 132 AA5 2 MET A 140 ? TYR A 150 ? MET H 135 TYR H 145 AA5 3 LEU A 179 ? PRO A 189 ? LEU H 174 PRO H 184 AA5 4 VAL A 174 ? GLN A 176 ? VAL H 169 GLN H 171 AA6 1 THR A 156 ? TRP A 159 ? THR H 151 TRP H 154 AA6 2 VAL A 198 ? HIS A 204 ? VAL H 193 HIS H 199 AA6 3 THR A 209 ? ILE A 215 ? THR H 204 ILE H 210 AA7 1 MET B 4 ? THR B 7 ? MET L 4 THR L 7 AA7 2 ALA B 19 ? SER B 25 ? ALA L 19 SER L 25 AA7 3 ASP B 75 ? ILE B 80 ? ASP L 70 ILE L 75 AA7 4 PHE B 67 ? SER B 72 ? PHE L 62 SER L 67 AA8 1 SER B 10 ? SER B 14 ? SER L 10 SER L 14 AA8 2 THR B 107 ? LYS B 112 ? THR L 102 LYS L 107 AA8 3 VAL B 90 ? GLN B 95 ? VAL L 85 GLN L 90 AA8 4 LEU B 38 ? GLN B 43 ? LEU L 33 GLN L 38 AA8 5 LYS B 50 ? TYR B 54 ? LYS L 45 TYR L 49 AA8 6 ASN B 58 ? ARG B 59 ? ASN L 53 ARG L 54 AA9 1 SER B 10 ? SER B 14 ? SER L 10 SER L 14 AA9 2 THR B 107 ? LYS B 112 ? THR L 102 LYS L 107 AA9 3 VAL B 90 ? GLN B 95 ? VAL L 85 GLN L 90 AA9 4 THR B 102 ? PHE B 103 ? THR L 97 PHE L 98 AB1 1 THR B 119 ? PHE B 123 ? THR L 114 PHE L 118 AB1 2 GLY B 134 ? PHE B 144 ? GLY L 129 PHE L 139 AB1 3 TYR B 178 ? THR B 187 ? TYR L 173 THR L 182 AB1 4 VAL B 164 ? TRP B 168 ? VAL L 159 TRP L 163 AB2 1 SER B 158 ? ARG B 160 ? SER L 153 ARG L 155 AB2 2 ASN B 150 ? ILE B 155 ? ASN L 145 ILE L 150 AB2 3 SER B 196 ? THR B 202 ? SER L 191 THR L 197 AB2 4 ILE B 210 ? ASN B 215 ? ILE L 205 ASN L 210 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLN A 5 ? N GLN H 5 O THR A 23 ? O THR H 23 AA1 2 3 N CYS A 22 ? N CYS H 22 O VAL A 78 ? O VAL H 78 AA1 3 4 O PHE A 79 ? O PHE H 79 N SER A 70 ? N SER H 70 AA2 1 2 N VAL A 12 ? N VAL H 12 O THR A 115 ? O THR H 110 AA2 2 3 O VAL A 114 ? O VAL H 109 N ALA A 91 ? N ALA H 88 AA2 3 4 O PHE A 94 ? O PHE H 91 N VAL A 37 ? N VAL H 37 AA2 4 5 N TRP A 36 ? N TRP H 36 O LEU A 48 ? O LEU H 48 AA2 5 6 N VAL A 50 ? N VAL H 50 O GLU A 58 ? O GLU H 58 AA3 1 2 N VAL A 12 ? N VAL H 12 O THR A 115 ? O THR H 110 AA3 2 3 O VAL A 114 ? O VAL H 109 N ALA A 91 ? N ALA H 88 AA3 3 4 N ARG A 97 ? N ARG H 94 O TYR A 107 ? O TYR H 102 AA4 1 2 N SER A 125 ? N SER H 120 O LYS A 148 ? O LYS H 143 AA4 2 3 N VAL A 147 ? N VAL H 142 O LEU A 182 ? O LEU H 177 AA4 3 4 O SER A 185 ? O SER H 180 N HIS A 169 ? N HIS H 164 AA5 1 2 N THR A 137 ? N THR H 132 O MET A 140 ? O MET H 135 AA5 2 3 N VAL A 147 ? N VAL H 142 O LEU A 182 ? O LEU H 177 AA5 3 4 O LEU A 179 ? O LEU H 174 N GLN A 176 ? N GLN H 171 AA6 1 2 N THR A 158 ? N THR H 153 O ASN A 201 ? O ASN H 196 AA6 2 3 N VAL A 202 ? N VAL H 197 O VAL A 211 ? O VAL H 206 AA7 1 2 N THR B 5 ? N THR L 5 O ARG B 24 ? O ARG L 24 AA7 2 3 N CYS B 23 ? N CYS L 23 O PHE B 76 ? O PHE L 71 AA7 3 4 O LYS B 79 ? O LYS L 74 N SER B 68 ? N SER L 63 AA8 1 2 N VAL B 13 ? N VAL L 13 O LYS B 112 ? O LYS L 107 AA8 2 3 O THR B 107 ? O THR L 102 N TYR B 91 ? N TYR L 86 AA8 3 4 O TYR B 92 ? O TYR L 87 N TYR B 41 ? N TYR L 36 AA8 4 5 N TRP B 40 ? N TRP L 35 O LEU B 52 ? O LEU L 47 AA8 5 6 N TYR B 54 ? N TYR L 49 O ASN B 58 ? O ASN L 53 AA9 1 2 N VAL B 13 ? N VAL L 13 O LYS B 112 ? O LYS L 107 AA9 2 3 O THR B 107 ? O THR L 102 N TYR B 91 ? N TYR L 86 AA9 3 4 N GLN B 95 ? N GLN L 90 O THR B 102 ? O THR L 97 AB1 1 2 N THR B 119 ? N THR L 114 O ASN B 142 ? O ASN L 137 AB1 2 3 N LEU B 141 ? N LEU L 136 O MET B 180 ? O MET L 175 AB1 3 4 O THR B 183 ? O THR L 178 N LEU B 165 ? N LEU L 160 AB2 1 2 O SER B 158 ? O SER L 153 N ILE B 155 ? N ILE L 150 AB2 2 3 N LYS B 152 ? N LYS L 147 O GLU B 200 ? O GLU L 195 AB2 3 4 N ALA B 201 ? N ALA L 196 O ILE B 210 ? O ILE L 205 # _atom_sites.entry_id 6C5J _atom_sites.fract_transf_matrix[1][1] 0.008603 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002355 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022001 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013701 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 1 1 GLU GLU H . n A 1 2 VAL 2 2 2 VAL VAL H . n A 1 3 GLN 3 3 3 GLN GLN H . n A 1 4 LEU 4 4 4 LEU LEU H . n A 1 5 GLN 5 5 5 GLN GLN H . n A 1 6 GLU 6 6 6 GLU GLU H . n A 1 7 SER 7 7 7 SER SER H . n A 1 8 GLY 8 8 8 GLY GLY H . n A 1 9 PRO 9 9 9 PRO PRO H . n A 1 10 GLY 10 10 10 GLY GLY H . n A 1 11 LEU 11 11 11 LEU LEU H . n A 1 12 VAL 12 12 12 VAL VAL H . n A 1 13 GLN 13 13 13 GLN GLN H . n A 1 14 PRO 14 14 14 PRO PRO H . n A 1 15 SER 15 15 15 SER SER H . n A 1 16 GLN 16 16 16 GLN GLN H . n A 1 17 SER 17 17 17 SER SER H . n A 1 18 LEU 18 18 18 LEU LEU H . n A 1 19 SER 19 19 19 SER SER H . n A 1 20 ILE 20 20 20 ILE ILE H . n A 1 21 THR 21 21 21 THR THR H . n A 1 22 CYS 22 22 22 CYS CYS H . n A 1 23 THR 23 23 23 THR THR H . n A 1 24 VAL 24 24 24 VAL VAL H . n A 1 25 SER 25 25 25 SER SER H . n A 1 26 GLY 26 26 26 GLY GLY H . n A 1 27 PHE 27 27 27 PHE PHE H . n A 1 28 SER 28 28 28 SER SER H . n A 1 29 LEU 29 29 29 LEU LEU H . n A 1 30 THR 30 30 30 THR THR H . n A 1 31 THR 31 31 31 THR THR H . n A 1 32 TYR 32 32 32 TYR TYR H . n A 1 33 GLY 33 33 33 GLY GLY H . n A 1 34 VAL 34 34 34 VAL VAL H . n A 1 35 HIS 35 35 35 HIS HIS H . n A 1 36 TRP 36 36 36 TRP TRP H . n A 1 37 VAL 37 37 37 VAL VAL H . n A 1 38 ARG 38 38 38 ARG ARG H . n A 1 39 GLN 39 39 39 GLN GLN H . n A 1 40 SER 40 40 40 SER SER H . n A 1 41 PRO 41 41 41 PRO PRO H . n A 1 42 GLY 42 42 42 GLY GLY H . n A 1 43 LYS 43 43 43 LYS LYS H . n A 1 44 GLY 44 44 44 GLY GLY H . n A 1 45 LEU 45 45 45 LEU LEU H . n A 1 46 GLU 46 46 46 GLU GLU H . n A 1 47 TRP 47 47 47 TRP TRP H . n A 1 48 LEU 48 48 48 LEU LEU H . n A 1 49 GLY 49 49 49 GLY GLY H . n A 1 50 VAL 50 50 50 VAL VAL H . n A 1 51 ILE 51 51 51 ILE ILE H . n A 1 52 TRP 52 52 52 TRP TRP H . n A 1 53 SER 53 53 53 SER SER H . n A 1 54 GLY 54 54 54 GLY GLY H . n A 1 55 GLY 55 55 55 GLY GLY H . n A 1 56 THR 56 56 56 THR THR H . n A 1 57 THR 57 57 57 THR THR H . n A 1 58 GLU 58 58 58 GLU GLU H . n A 1 59 TYR 59 59 59 TYR TYR H . n A 1 60 ASN 60 60 60 ASN ASN H . n A 1 61 ALA 61 61 61 ALA ALA H . n A 1 62 ALA 62 62 62 ALA ALA H . n A 1 63 PHE 63 63 63 PHE PHE H . n A 1 64 ILE 64 64 64 ILE ILE H . n A 1 65 SER 65 65 65 SER SER H . n A 1 66 ARG 66 66 66 ARG ARG H . n A 1 67 LEU 67 67 67 LEU LEU H . n A 1 68 SER 68 68 68 SER SER H . n A 1 69 ILE 69 69 69 ILE ILE H . n A 1 70 SER 70 70 70 SER SER H . n A 1 71 LYS 71 71 71 LYS LYS H . n A 1 72 ASP 72 72 72 ASP ASP H . n A 1 73 ASN 73 73 73 ASN ASN H . n A 1 74 SER 74 74 74 SER SER H . n A 1 75 LYS 75 75 75 LYS LYS H . n A 1 76 SER 76 76 76 SER SER H . n A 1 77 GLN 77 77 77 GLN GLN H . n A 1 78 VAL 78 78 78 VAL VAL H . n A 1 79 PHE 79 79 79 PHE PHE H . n A 1 80 PHE 80 80 80 PHE PHE H . n A 1 81 LYS 81 81 81 LYS LYS H . n A 1 82 MET 82 82 82 MET MET H . n A 1 83 ASN 83 82 82 ASN ASN H A n A 1 84 SER 84 82 82 SER SER H B n A 1 85 LEU 85 82 82 LEU LEU H C n A 1 86 GLN 86 83 83 GLN GLN H . n A 1 87 THR 87 84 84 THR THR H . n A 1 88 ASN 88 85 85 ASN ASN H . n A 1 89 ASP 89 86 86 ASP ASP H . n A 1 90 THR 90 87 87 THR THR H . n A 1 91 ALA 91 88 88 ALA ALA H . n A 1 92 ILE 92 89 89 ILE ILE H . n A 1 93 TYR 93 90 90 TYR TYR H . n A 1 94 PHE 94 91 91 PHE PHE H . n A 1 95 CYS 95 92 92 CYS CYS H . n A 1 96 VAL 96 93 93 VAL VAL H . n A 1 97 ARG 97 94 94 ARG ARG H . n A 1 98 MET 98 95 95 MET MET H . n A 1 99 ARG 99 96 96 ARG ARG H . n A 1 100 ILE 100 97 97 ILE ILE H . n A 1 101 THR 101 98 98 THR THR H . n A 1 102 THR 102 99 99 THR THR H . n A 1 103 ASP 103 100 100 ASP ASP H . n A 1 104 TRP 104 100 100 TRP TRP H A n A 1 105 PHE 105 100 100 PHE PHE H B n A 1 106 ALA 106 101 101 ALA ALA H . n A 1 107 TYR 107 102 102 TYR TYR H . n A 1 108 TRP 108 103 103 TRP TRP H . n A 1 109 GLY 109 104 104 GLY GLY H . n A 1 110 GLN 110 105 105 GLN GLN H . n A 1 111 GLY 111 106 106 GLY GLY H . n A 1 112 THR 112 107 107 THR THR H . n A 1 113 LEU 113 108 108 LEU LEU H . n A 1 114 VAL 114 109 109 VAL VAL H . n A 1 115 THR 115 110 110 THR THR H . n A 1 116 VAL 116 111 111 VAL VAL H . n A 1 117 SER 117 112 112 SER SER H . n A 1 118 ALA 118 113 113 ALA ALA H . n A 1 119 ALA 119 114 114 ALA ALA H . n A 1 120 LYS 120 115 115 LYS LYS H . n A 1 121 THR 121 116 116 THR THR H . n A 1 122 THR 122 117 117 THR THR H . n A 1 123 PRO 123 118 118 PRO PRO H . n A 1 124 PRO 124 119 119 PRO PRO H . n A 1 125 SER 125 120 120 SER SER H . n A 1 126 VAL 126 121 121 VAL VAL H . n A 1 127 TYR 127 122 122 TYR TYR H . n A 1 128 PRO 128 123 123 PRO PRO H . n A 1 129 LEU 129 124 124 LEU LEU H . n A 1 130 ALA 130 125 125 ALA ALA H . n A 1 131 PRO 131 126 126 PRO PRO H . n A 1 132 GLY 132 127 127 GLY GLY H . n A 1 133 SER 133 128 128 SER SER H . n A 1 134 ALA 134 129 129 ALA ALA H . n A 1 135 ALA 135 130 130 ALA ALA H . n A 1 136 GLN 136 131 131 GLN GLN H . n A 1 137 THR 137 132 132 THR THR H . n A 1 138 ASN 138 133 133 ASN ASN H . n A 1 139 SER 139 134 134 SER SER H . n A 1 140 MET 140 135 135 MET MET H . n A 1 141 VAL 141 136 136 VAL VAL H . n A 1 142 THR 142 137 137 THR THR H . n A 1 143 LEU 143 138 138 LEU LEU H . n A 1 144 GLY 144 139 139 GLY GLY H . n A 1 145 CYS 145 140 140 CYS CYS H . n A 1 146 LEU 146 141 141 LEU LEU H . n A 1 147 VAL 147 142 142 VAL VAL H . n A 1 148 LYS 148 143 143 LYS LYS H . n A 1 149 GLY 149 144 144 GLY GLY H . n A 1 150 TYR 150 145 145 TYR TYR H . n A 1 151 PHE 151 146 146 PHE PHE H . n A 1 152 PRO 152 147 147 PRO PRO H . n A 1 153 GLU 153 148 148 GLU GLU H . n A 1 154 PRO 154 149 149 PRO PRO H . n A 1 155 VAL 155 150 150 VAL VAL H . n A 1 156 THR 156 151 151 THR THR H . n A 1 157 VAL 157 152 152 VAL VAL H . n A 1 158 THR 158 153 153 THR THR H . n A 1 159 TRP 159 154 154 TRP TRP H . n A 1 160 ASN 160 155 155 ASN ASN H . n A 1 161 SER 161 156 156 SER SER H . n A 1 162 GLY 162 157 157 GLY GLY H . n A 1 163 SER 163 158 158 SER SER H . n A 1 164 LEU 164 159 159 LEU LEU H . n A 1 165 SER 165 160 160 SER SER H . n A 1 166 SER 166 161 161 SER SER H . n A 1 167 GLY 167 162 162 GLY GLY H . n A 1 168 VAL 168 163 163 VAL VAL H . n A 1 169 HIS 169 164 164 HIS HIS H . n A 1 170 THR 170 165 165 THR THR H . n A 1 171 PHE 171 166 166 PHE PHE H . n A 1 172 PRO 172 167 167 PRO PRO H . n A 1 173 ALA 173 168 168 ALA ALA H . n A 1 174 VAL 174 169 169 VAL VAL H . n A 1 175 LEU 175 170 170 LEU LEU H . n A 1 176 GLN 176 171 171 GLN GLN H . n A 1 177 SER 177 172 172 SER SER H . n A 1 178 ASP 178 173 173 ASP ASP H . n A 1 179 LEU 179 174 174 LEU LEU H . n A 1 180 TYR 180 175 175 TYR TYR H . n A 1 181 THR 181 176 176 THR THR H . n A 1 182 LEU 182 177 177 LEU LEU H . n A 1 183 SER 183 178 178 SER SER H . n A 1 184 SER 184 179 179 SER SER H . n A 1 185 SER 185 180 180 SER SER H . n A 1 186 VAL 186 181 181 VAL VAL H . n A 1 187 THR 187 182 182 THR THR H . n A 1 188 VAL 188 183 183 VAL VAL H . n A 1 189 PRO 189 184 184 PRO PRO H . n A 1 190 SER 190 185 185 SER SER H . n A 1 191 SER 191 186 186 SER SER H . n A 1 192 THR 192 187 187 THR THR H . n A 1 193 TRP 193 188 188 TRP TRP H . n A 1 194 PRO 194 189 189 PRO PRO H . n A 1 195 SER 195 190 190 SER SER H . n A 1 196 GLU 196 191 191 GLU GLU H . n A 1 197 THR 197 192 192 THR THR H . n A 1 198 VAL 198 193 193 VAL VAL H . n A 1 199 THR 199 194 194 THR THR H . n A 1 200 CYS 200 195 195 CYS CYS H . n A 1 201 ASN 201 196 196 ASN ASN H . n A 1 202 VAL 202 197 197 VAL VAL H . n A 1 203 ALA 203 198 198 ALA ALA H . n A 1 204 HIS 204 199 199 HIS HIS H . n A 1 205 PRO 205 200 200 PRO PRO H . n A 1 206 ALA 206 201 201 ALA ALA H . n A 1 207 SER 207 202 202 SER SER H . n A 1 208 SER 208 203 203 SER SER H . n A 1 209 THR 209 204 204 THR THR H . n A 1 210 LYS 210 205 205 LYS LYS H . n A 1 211 VAL 211 206 206 VAL VAL H . n A 1 212 ASP 212 207 207 ASP ASP H . n A 1 213 LYS 213 208 208 LYS LYS H . n A 1 214 LYS 214 209 209 LYS LYS H . n A 1 215 ILE 215 210 210 ILE ILE H . n A 1 216 VAL 216 211 211 VAL VAL H . n A 1 217 PRO 217 212 212 PRO PRO H . n A 1 218 ARG 218 213 213 ARG ARG H . n B 2 1 ASP 1 1 1 ASP ASP L . n B 2 2 VAL 2 2 2 VAL VAL L . n B 2 3 LEU 3 3 3 LEU LEU L . n B 2 4 MET 4 4 4 MET MET L . n B 2 5 THR 5 5 5 THR THR L . n B 2 6 GLN 6 6 6 GLN GLN L . n B 2 7 THR 7 7 7 THR THR L . n B 2 8 PRO 8 8 8 PRO PRO L . n B 2 9 LEU 9 9 9 LEU LEU L . n B 2 10 SER 10 10 10 SER SER L . n B 2 11 LEU 11 11 11 LEU LEU L . n B 2 12 PRO 12 12 12 PRO PRO L . n B 2 13 VAL 13 13 13 VAL VAL L . n B 2 14 SER 14 14 14 SER SER L . n B 2 15 LEU 15 15 15 LEU LEU L . n B 2 16 GLY 16 16 16 GLY GLY L . n B 2 17 ASP 17 17 17 ASP ASP L . n B 2 18 GLN 18 18 18 GLN GLN L . n B 2 19 ALA 19 19 19 ALA ALA L . n B 2 20 SER 20 20 20 SER SER L . n B 2 21 ILE 21 21 21 ILE ILE L . n B 2 22 SER 22 22 22 SER SER L . n B 2 23 CYS 23 23 23 CYS CYS L . n B 2 24 ARG 24 24 24 ARG ARG L . n B 2 25 SER 25 25 25 SER SER L . n B 2 26 SER 26 26 26 SER SER L . n B 2 27 GLN 27 27 27 GLN GLN L . n B 2 28 THR 28 27 27 THR THR L A n B 2 29 ILE 29 27 27 ILE ILE L B n B 2 30 VAL 30 27 27 VAL VAL L C n B 2 31 HIS 31 27 27 HIS HIS L D n B 2 32 LYS 32 27 27 LYS LYS L E n B 2 33 ASN 33 28 28 ASN ASN L . n B 2 34 GLY 34 29 29 GLY GLY L . n B 2 35 ASN 35 30 30 ASN ASN L . n B 2 36 THR 36 31 31 THR THR L . n B 2 37 TYR 37 32 32 TYR TYR L . n B 2 38 LEU 38 33 33 LEU LEU L . n B 2 39 GLU 39 34 34 GLU GLU L . n B 2 40 TRP 40 35 35 TRP TRP L . n B 2 41 TYR 41 36 36 TYR TYR L . n B 2 42 LEU 42 37 37 LEU LEU L . n B 2 43 GLN 43 38 38 GLN GLN L . n B 2 44 LYS 44 39 39 LYS LYS L . n B 2 45 PRO 45 40 40 PRO PRO L . n B 2 46 GLY 46 41 41 GLY GLY L . n B 2 47 GLN 47 42 42 GLN GLN L . n B 2 48 SER 48 43 43 SER SER L . n B 2 49 PRO 49 44 44 PRO PRO L . n B 2 50 LYS 50 45 45 LYS LYS L . n B 2 51 LEU 51 46 46 LEU LEU L . n B 2 52 LEU 52 47 47 LEU LEU L . n B 2 53 ILE 53 48 48 ILE ILE L . n B 2 54 TYR 54 49 49 TYR TYR L . n B 2 55 LYS 55 50 50 LYS LYS L . n B 2 56 VAL 56 51 51 VAL VAL L . n B 2 57 SER 57 52 52 SER SER L . n B 2 58 ASN 58 53 53 ASN ASN L . n B 2 59 ARG 59 54 54 ARG ARG L . n B 2 60 PHE 60 55 55 PHE PHE L . n B 2 61 SER 61 56 56 SER SER L . n B 2 62 GLY 62 57 57 GLY GLY L . n B 2 63 VAL 63 58 58 VAL VAL L . n B 2 64 PRO 64 59 59 PRO PRO L . n B 2 65 ASP 65 60 60 ASP ASP L . n B 2 66 ARG 66 61 61 ARG ARG L . n B 2 67 PHE 67 62 62 PHE PHE L . n B 2 68 SER 68 63 63 SER SER L . n B 2 69 GLY 69 64 64 GLY GLY L . n B 2 70 SER 70 65 65 SER SER L . n B 2 71 GLY 71 66 66 GLY GLY L . n B 2 72 SER 72 67 67 SER SER L . n B 2 73 GLY 73 68 68 GLY GLY L . n B 2 74 THR 74 69 69 THR THR L . n B 2 75 ASP 75 70 70 ASP ASP L . n B 2 76 PHE 76 71 71 PHE PHE L . n B 2 77 THR 77 72 72 THR THR L . n B 2 78 LEU 78 73 73 LEU LEU L . n B 2 79 LYS 79 74 74 LYS LYS L . n B 2 80 ILE 80 75 75 ILE ILE L . n B 2 81 SER 81 76 76 SER SER L . n B 2 82 ARG 82 77 77 ARG ARG L . n B 2 83 VAL 83 78 78 VAL VAL L . n B 2 84 GLU 84 79 79 GLU GLU L . n B 2 85 ALA 85 80 80 ALA ALA L . n B 2 86 ALA 86 81 81 ALA ALA L . n B 2 87 ASP 87 82 82 ASP ASP L . n B 2 88 LEU 88 83 83 LEU LEU L . n B 2 89 GLY 89 84 84 GLY GLY L . n B 2 90 VAL 90 85 85 VAL VAL L . n B 2 91 TYR 91 86 86 TYR TYR L . n B 2 92 TYR 92 87 87 TYR TYR L . n B 2 93 CYS 93 88 88 CYS CYS L . n B 2 94 PHE 94 89 89 PHE PHE L . n B 2 95 GLN 95 90 90 GLN GLN L . n B 2 96 GLY 96 91 91 GLY GLY L . n B 2 97 SER 97 92 92 SER SER L . n B 2 98 HIS 98 93 93 HIS HIS L . n B 2 99 VAL 99 94 94 VAL VAL L . n B 2 100 PRO 100 95 95 PRO PRO L . n B 2 101 TYR 101 96 96 TYR TYR L . n B 2 102 THR 102 97 97 THR THR L . n B 2 103 PHE 103 98 98 PHE PHE L . n B 2 104 GLY 104 99 99 GLY GLY L . n B 2 105 GLY 105 100 100 GLY GLY L . n B 2 106 GLY 106 101 101 GLY GLY L . n B 2 107 THR 107 102 102 THR THR L . n B 2 108 LYS 108 103 103 LYS LYS L . n B 2 109 LEU 109 104 104 LEU LEU L . n B 2 110 GLU 110 105 105 GLU GLU L . n B 2 111 ILE 111 106 106 ILE ILE L . n B 2 112 LYS 112 107 107 LYS LYS L . n B 2 113 ARG 113 108 108 ARG ARG L . n B 2 114 ALA 114 109 109 ALA ALA L . n B 2 115 ASP 115 110 110 ASP ASP L . n B 2 116 ALA 116 111 111 ALA ALA L . n B 2 117 ALA 117 112 112 ALA ALA L . n B 2 118 PRO 118 113 113 PRO PRO L . n B 2 119 THR 119 114 114 THR THR L . n B 2 120 VAL 120 115 115 VAL VAL L . n B 2 121 SER 121 116 116 SER SER L . n B 2 122 ILE 122 117 117 ILE ILE L . n B 2 123 PHE 123 118 118 PHE PHE L . n B 2 124 PRO 124 119 119 PRO PRO L . n B 2 125 PRO 125 120 120 PRO PRO L . n B 2 126 SER 126 121 121 SER SER L . n B 2 127 SER 127 122 122 SER SER L . n B 2 128 GLU 128 123 123 GLU GLU L . n B 2 129 GLN 129 124 124 GLN GLN L . n B 2 130 LEU 130 125 125 LEU LEU L . n B 2 131 THR 131 126 126 THR THR L . n B 2 132 SER 132 127 127 SER SER L . n B 2 133 GLY 133 128 128 GLY GLY L . n B 2 134 GLY 134 129 129 GLY GLY L . n B 2 135 ALA 135 130 130 ALA ALA L . n B 2 136 SER 136 131 131 SER SER L . n B 2 137 VAL 137 132 132 VAL VAL L . n B 2 138 VAL 138 133 133 VAL VAL L . n B 2 139 CYS 139 134 134 CYS CYS L . n B 2 140 PHE 140 135 135 PHE PHE L . n B 2 141 LEU 141 136 136 LEU LEU L . n B 2 142 ASN 142 137 137 ASN ASN L . n B 2 143 ASN 143 138 138 ASN ASN L . n B 2 144 PHE 144 139 139 PHE PHE L . n B 2 145 TYR 145 140 140 TYR TYR L . n B 2 146 PRO 146 141 141 PRO PRO L . n B 2 147 LYS 147 142 142 LYS LYS L . n B 2 148 ASP 148 143 143 ASP ASP L . n B 2 149 ILE 149 144 144 ILE ILE L . n B 2 150 ASN 150 145 145 ASN ASN L . n B 2 151 VAL 151 146 146 VAL VAL L . n B 2 152 LYS 152 147 147 LYS LYS L . n B 2 153 TRP 153 148 148 TRP TRP L . n B 2 154 LYS 154 149 149 LYS LYS L . n B 2 155 ILE 155 150 150 ILE ILE L . n B 2 156 ASP 156 151 151 ASP ASP L . n B 2 157 GLY 157 152 152 GLY GLY L . n B 2 158 SER 158 153 153 SER SER L . n B 2 159 GLU 159 154 154 GLU GLU L . n B 2 160 ARG 160 155 155 ARG ARG L . n B 2 161 GLN 161 156 156 GLN GLN L . n B 2 162 ASN 162 157 157 ASN ASN L . n B 2 163 GLY 163 158 158 GLY GLY L . n B 2 164 VAL 164 159 159 VAL VAL L . n B 2 165 LEU 165 160 160 LEU LEU L . n B 2 166 ASN 166 161 161 ASN ASN L . n B 2 167 SER 167 162 162 SER SER L . n B 2 168 TRP 168 163 163 TRP TRP L . n B 2 169 THR 169 164 164 THR THR L . n B 2 170 ASP 170 165 165 ASP ASP L . n B 2 171 GLN 171 166 166 GLN GLN L . n B 2 172 ASP 172 167 167 ASP ASP L . n B 2 173 SER 173 168 168 SER SER L . n B 2 174 LYS 174 169 169 LYS LYS L . n B 2 175 ASP 175 170 170 ASP ASP L . n B 2 176 SER 176 171 171 SER SER L . n B 2 177 THR 177 172 172 THR THR L . n B 2 178 TYR 178 173 173 TYR TYR L . n B 2 179 SER 179 174 174 SER SER L . n B 2 180 MET 180 175 175 MET MET L . n B 2 181 SER 181 176 176 SER SER L . n B 2 182 SER 182 177 177 SER SER L . n B 2 183 THR 183 178 178 THR THR L . n B 2 184 LEU 184 179 179 LEU LEU L . n B 2 185 THR 185 180 180 THR THR L . n B 2 186 LEU 186 181 181 LEU LEU L . n B 2 187 THR 187 182 182 THR THR L . n B 2 188 LYS 188 183 183 LYS LYS L . n B 2 189 ASP 189 184 184 ASP ASP L . n B 2 190 GLU 190 185 185 GLU GLU L . n B 2 191 TYR 191 186 186 TYR TYR L . n B 2 192 GLU 192 187 187 GLU GLU L . n B 2 193 ARG 193 188 188 ARG ARG L . n B 2 194 HIS 194 189 189 HIS HIS L . n B 2 195 ASN 195 190 190 ASN ASN L . n B 2 196 SER 196 191 191 SER SER L . n B 2 197 TYR 197 192 192 TYR TYR L . n B 2 198 THR 198 193 193 THR THR L . n B 2 199 CYS 199 194 194 CYS CYS L . n B 2 200 GLU 200 195 195 GLU GLU L . n B 2 201 ALA 201 196 196 ALA ALA L . n B 2 202 THR 202 197 197 THR THR L . n B 2 203 HIS 203 198 198 HIS HIS L . n B 2 204 LYS 204 199 199 LYS LYS L . n B 2 205 THR 205 200 200 THR THR L . n B 2 206 SER 206 201 201 SER SER L . n B 2 207 THR 207 202 202 THR THR L . n B 2 208 SER 208 203 203 SER SER L . n B 2 209 PRO 209 204 204 PRO PRO L . n B 2 210 ILE 210 205 205 ILE ILE L . n B 2 211 VAL 211 206 206 VAL VAL L . n B 2 212 LYS 212 207 207 LYS LYS L . n B 2 213 SER 213 208 208 SER SER L . n B 2 214 PHE 214 209 209 PHE PHE L . n B 2 215 ASN 215 210 210 ASN ASN L . n B 2 216 ARG 216 211 211 ARG ARG L . n B 2 217 ASN 217 212 212 ASN ASN L . n B 2 218 GLU 218 213 ? ? ? L . n B 2 219 CYS 219 214 ? ? ? L . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NAG 1 301 400 NAG NAG H . E 5 HOH 1 401 16 HOH HOH H . E 5 HOH 2 402 221 HOH HOH H . E 5 HOH 3 403 216 HOH HOH H . E 5 HOH 4 404 52 HOH HOH H . E 5 HOH 5 405 217 HOH HOH H . E 5 HOH 6 406 13 HOH HOH H . E 5 HOH 7 407 39 HOH HOH H . E 5 HOH 8 408 24 HOH HOH H . E 5 HOH 9 409 206 HOH HOH H . E 5 HOH 10 410 14 HOH HOH H . E 5 HOH 11 411 207 HOH HOH H . E 5 HOH 12 412 218 HOH HOH H . E 5 HOH 13 413 203 HOH HOH H . E 5 HOH 14 414 212 HOH HOH H . F 5 HOH 1 301 220 HOH HOH L . F 5 HOH 2 302 96 HOH HOH L . F 5 HOH 3 303 222 HOH HOH L . F 5 HOH 4 304 215 HOH HOH L . F 5 HOH 5 305 202 HOH HOH L . F 5 HOH 6 306 21 HOH HOH L . F 5 HOH 7 307 214 HOH HOH L . F 5 HOH 8 308 210 HOH HOH L . F 5 HOH 9 309 15 HOH HOH L . F 5 HOH 10 310 8 HOH HOH L . F 5 HOH 11 311 209 HOH HOH L . F 5 HOH 12 312 44 HOH HOH L . F 5 HOH 13 313 211 HOH HOH L . F 5 HOH 14 314 205 HOH HOH L . F 5 HOH 15 315 208 HOH HOH L . F 5 HOH 16 316 31 HOH HOH L . F 5 HOH 17 317 27 HOH HOH L . F 5 HOH 18 318 213 HOH HOH L . F 5 HOH 19 319 219 HOH HOH L . F 5 HOH 20 320 204 HOH HOH L . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5900 ? 1 MORE -22 ? 1 'SSA (A^2)' 19200 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-01-09 2 'Structure model' 1 1 2019-02-27 3 'Structure model' 1 2 2020-01-08 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2023-10-04 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Atomic model' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Derived calculations' 11 5 'Structure model' 'Refinement description' 12 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' pdbx_audit_support 3 4 'Structure model' atom_site 4 4 'Structure model' chem_comp 5 4 'Structure model' entity 6 4 'Structure model' pdbx_branch_scheme 7 4 'Structure model' pdbx_chem_comp_identifier 8 4 'Structure model' pdbx_entity_branch 9 4 'Structure model' pdbx_entity_branch_descriptor 10 4 'Structure model' pdbx_entity_branch_link 11 4 'Structure model' pdbx_entity_branch_list 12 4 'Structure model' pdbx_entity_nonpoly 13 4 'Structure model' pdbx_nonpoly_scheme 14 4 'Structure model' pdbx_struct_assembly_gen 15 4 'Structure model' struct_asym 16 4 'Structure model' struct_conn 17 4 'Structure model' struct_site 18 4 'Structure model' struct_site_gen 19 5 'Structure model' chem_comp 20 5 'Structure model' chem_comp_atom 21 5 'Structure model' chem_comp_bond 22 5 'Structure model' database_2 23 5 'Structure model' pdbx_initial_refinement_model 24 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.title' 5 2 'Structure model' '_citation.year' 6 3 'Structure model' '_pdbx_audit_support.funding_organization' 7 4 'Structure model' '_atom_site.B_iso_or_equiv' 8 4 'Structure model' '_atom_site.Cartn_x' 9 4 'Structure model' '_atom_site.Cartn_y' 10 4 'Structure model' '_atom_site.Cartn_z' 11 4 'Structure model' '_atom_site.auth_asym_id' 12 4 'Structure model' '_atom_site.auth_atom_id' 13 4 'Structure model' '_atom_site.auth_comp_id' 14 4 'Structure model' '_atom_site.auth_seq_id' 15 4 'Structure model' '_atom_site.label_asym_id' 16 4 'Structure model' '_atom_site.label_atom_id' 17 4 'Structure model' '_atom_site.label_comp_id' 18 4 'Structure model' '_atom_site.label_entity_id' 19 4 'Structure model' '_atom_site.type_symbol' 20 4 'Structure model' '_chem_comp.mon_nstd_flag' 21 4 'Structure model' '_chem_comp.name' 22 4 'Structure model' '_chem_comp.type' 23 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 24 4 'Structure model' '_struct_conn.pdbx_role' 25 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 26 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 29 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 30 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 31 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 32 5 'Structure model' '_chem_comp.pdbx_synonyms' 33 5 'Structure model' '_database_2.pdbx_DOI' 34 5 'Structure model' '_database_2.pdbx_database_accession' 35 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0155 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER H 15 ? ? 68.84 -7.84 2 1 THR H 98 ? ? -108.08 -67.37 3 1 PHE H 100 B ? -92.27 36.23 4 1 ASN H 133 ? ? 56.60 -135.66 5 1 SER H 172 ? ? 58.83 -106.56 6 1 VAL L 51 ? ? 72.34 -53.19 7 1 SER L 52 ? ? -140.04 17.72 8 1 ALA L 130 ? ? -158.21 89.44 9 1 ASN L 190 ? ? -121.59 -55.54 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 H LYS 205 ? CG ? A LYS 210 CG 2 1 Y 1 H LYS 205 ? CD ? A LYS 210 CD 3 1 Y 1 H LYS 205 ? CE ? A LYS 210 CE 4 1 Y 1 H LYS 205 ? NZ ? A LYS 210 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 L GLU 213 ? B GLU 218 2 1 Y 1 L CYS 214 ? B CYS 219 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GP1 C1 C N R 137 GP1 C2 C N R 138 GP1 C3 C N R 139 GP1 C4 C N S 140 GP1 C5 C N R 141 GP1 C6 C N N 142 GP1 N2 N N N 143 GP1 O1 O N N 144 GP1 O3 O N N 145 GP1 O4 O N N 146 GP1 O6 O N N 147 GP1 O5 O N N 148 GP1 O7B O N N 149 GP1 P4B P N N 150 GP1 O8B O N N 151 GP1 O9B O N N 152 GP1 H1 H N N 153 GP1 H2 H N N 154 GP1 H3 H N N 155 GP1 H4 H N N 156 GP1 H5 H N N 157 GP1 H61 H N N 158 GP1 H62 H N N 159 GP1 HN21 H N N 160 GP1 HN22 H N N 161 GP1 HO3 H N N 162 GP1 HO4 H N N 163 GP1 HO6 H N N 164 GP1 HOP1 H N N 165 GP1 HOP2 H N N 166 HIS N N N N 167 HIS CA C N S 168 HIS C C N N 169 HIS O O N N 170 HIS CB C N N 171 HIS CG C Y N 172 HIS ND1 N Y N 173 HIS CD2 C Y N 174 HIS CE1 C Y N 175 HIS NE2 N Y N 176 HIS OXT O N N 177 HIS H H N N 178 HIS H2 H N N 179 HIS HA H N N 180 HIS HB2 H N N 181 HIS HB3 H N N 182 HIS HD1 H N N 183 HIS HD2 H N N 184 HIS HE1 H N N 185 HIS HE2 H N N 186 HIS HXT H N N 187 HOH O O N N 188 HOH H1 H N N 189 HOH H2 H N N 190 ILE N N N N 191 ILE CA C N S 192 ILE C C N N 193 ILE O O N N 194 ILE CB C N S 195 ILE CG1 C N N 196 ILE CG2 C N N 197 ILE CD1 C N N 198 ILE OXT O N N 199 ILE H H N N 200 ILE H2 H N N 201 ILE HA H N N 202 ILE HB H N N 203 ILE HG12 H N N 204 ILE HG13 H N N 205 ILE HG21 H N N 206 ILE HG22 H N N 207 ILE HG23 H N N 208 ILE HD11 H N N 209 ILE HD12 H N N 210 ILE HD13 H N N 211 ILE HXT H N N 212 KDO C1 C N N 213 KDO O1A O N N 214 KDO O1B O N N 215 KDO C2 C N R 216 KDO O2 O N N 217 KDO C3 C N N 218 KDO C4 C N R 219 KDO O4 O N N 220 KDO C5 C N R 221 KDO O5 O N N 222 KDO C6 C N R 223 KDO O6 O N N 224 KDO C7 C N R 225 KDO O7 O N N 226 KDO C8 C N N 227 KDO O8 O N N 228 KDO HO1B H N N 229 KDO HO2 H N N 230 KDO H31 H N N 231 KDO H32 H N N 232 KDO H4 H N N 233 KDO HO4 H N N 234 KDO H5 H N N 235 KDO HO5 H N N 236 KDO H6 H N N 237 KDO H7 H N N 238 KDO HO7 H N N 239 KDO H81 H N N 240 KDO H82 H N N 241 KDO HO8 H N N 242 LEU N N N N 243 LEU CA C N S 244 LEU C C N N 245 LEU O O N N 246 LEU CB C N N 247 LEU CG C N N 248 LEU CD1 C N N 249 LEU CD2 C N N 250 LEU OXT O N N 251 LEU H H N N 252 LEU H2 H N N 253 LEU HA H N N 254 LEU HB2 H N N 255 LEU HB3 H N N 256 LEU HG H N N 257 LEU HD11 H N N 258 LEU HD12 H N N 259 LEU HD13 H N N 260 LEU HD21 H N N 261 LEU HD22 H N N 262 LEU HD23 H N N 263 LEU HXT H N N 264 LYS N N N N 265 LYS CA C N S 266 LYS C C N N 267 LYS O O N N 268 LYS CB C N N 269 LYS CG C N N 270 LYS CD C N N 271 LYS CE C N N 272 LYS NZ N N N 273 LYS OXT O N N 274 LYS H H N N 275 LYS H2 H N N 276 LYS HA H N N 277 LYS HB2 H N N 278 LYS HB3 H N N 279 LYS HG2 H N N 280 LYS HG3 H N N 281 LYS HD2 H N N 282 LYS HD3 H N N 283 LYS HE2 H N N 284 LYS HE3 H N N 285 LYS HZ1 H N N 286 LYS HZ2 H N N 287 LYS HZ3 H N N 288 LYS HXT H N N 289 MET N N N N 290 MET CA C N S 291 MET C C N N 292 MET O O N N 293 MET CB C N N 294 MET CG C N N 295 MET SD S N N 296 MET CE C N N 297 MET OXT O N N 298 MET H H N N 299 MET H2 H N N 300 MET HA H N N 301 MET HB2 H N N 302 MET HB3 H N N 303 MET HG2 H N N 304 MET HG3 H N N 305 MET HE1 H N N 306 MET HE2 H N N 307 MET HE3 H N N 308 MET HXT H N N 309 NAG C1 C N R 310 NAG C2 C N R 311 NAG C3 C N R 312 NAG C4 C N S 313 NAG C5 C N R 314 NAG C6 C N N 315 NAG C7 C N N 316 NAG C8 C N N 317 NAG N2 N N N 318 NAG O1 O N N 319 NAG O3 O N N 320 NAG O4 O N N 321 NAG O5 O N N 322 NAG O6 O N N 323 NAG O7 O N N 324 NAG H1 H N N 325 NAG H2 H N N 326 NAG H3 H N N 327 NAG H4 H N N 328 NAG H5 H N N 329 NAG H61 H N N 330 NAG H62 H N N 331 NAG H81 H N N 332 NAG H82 H N N 333 NAG H83 H N N 334 NAG HN2 H N N 335 NAG HO1 H N N 336 NAG HO3 H N N 337 NAG HO4 H N N 338 NAG HO6 H N N 339 PHE N N N N 340 PHE CA C N S 341 PHE C C N N 342 PHE O O N N 343 PHE CB C N N 344 PHE CG C Y N 345 PHE CD1 C Y N 346 PHE CD2 C Y N 347 PHE CE1 C Y N 348 PHE CE2 C Y N 349 PHE CZ C Y N 350 PHE OXT O N N 351 PHE H H N N 352 PHE H2 H N N 353 PHE HA H N N 354 PHE HB2 H N N 355 PHE HB3 H N N 356 PHE HD1 H N N 357 PHE HD2 H N N 358 PHE HE1 H N N 359 PHE HE2 H N N 360 PHE HZ H N N 361 PHE HXT H N N 362 PRO N N N N 363 PRO CA C N S 364 PRO C C N N 365 PRO O O N N 366 PRO CB C N N 367 PRO CG C N N 368 PRO CD C N N 369 PRO OXT O N N 370 PRO H H N N 371 PRO HA H N N 372 PRO HB2 H N N 373 PRO HB3 H N N 374 PRO HG2 H N N 375 PRO HG3 H N N 376 PRO HD2 H N N 377 PRO HD3 H N N 378 PRO HXT H N N 379 SER N N N N 380 SER CA C N S 381 SER C C N N 382 SER O O N N 383 SER CB C N N 384 SER OG O N N 385 SER OXT O N N 386 SER H H N N 387 SER H2 H N N 388 SER HA H N N 389 SER HB2 H N N 390 SER HB3 H N N 391 SER HG H N N 392 SER HXT H N N 393 THR N N N N 394 THR CA C N S 395 THR C C N N 396 THR O O N N 397 THR CB C N R 398 THR OG1 O N N 399 THR CG2 C N N 400 THR OXT O N N 401 THR H H N N 402 THR H2 H N N 403 THR HA H N N 404 THR HB H N N 405 THR HG1 H N N 406 THR HG21 H N N 407 THR HG22 H N N 408 THR HG23 H N N 409 THR HXT H N N 410 TRP N N N N 411 TRP CA C N S 412 TRP C C N N 413 TRP O O N N 414 TRP CB C N N 415 TRP CG C Y N 416 TRP CD1 C Y N 417 TRP CD2 C Y N 418 TRP NE1 N Y N 419 TRP CE2 C Y N 420 TRP CE3 C Y N 421 TRP CZ2 C Y N 422 TRP CZ3 C Y N 423 TRP CH2 C Y N 424 TRP OXT O N N 425 TRP H H N N 426 TRP H2 H N N 427 TRP HA H N N 428 TRP HB2 H N N 429 TRP HB3 H N N 430 TRP HD1 H N N 431 TRP HE1 H N N 432 TRP HE3 H N N 433 TRP HZ2 H N N 434 TRP HZ3 H N N 435 TRP HH2 H N N 436 TRP HXT H N N 437 TYR N N N N 438 TYR CA C N S 439 TYR C C N N 440 TYR O O N N 441 TYR CB C N N 442 TYR CG C Y N 443 TYR CD1 C Y N 444 TYR CD2 C Y N 445 TYR CE1 C Y N 446 TYR CE2 C Y N 447 TYR CZ C Y N 448 TYR OH O N N 449 TYR OXT O N N 450 TYR H H N N 451 TYR H2 H N N 452 TYR HA H N N 453 TYR HB2 H N N 454 TYR HB3 H N N 455 TYR HD1 H N N 456 TYR HD2 H N N 457 TYR HE1 H N N 458 TYR HE2 H N N 459 TYR HH H N N 460 TYR HXT H N N 461 VAL N N N N 462 VAL CA C N S 463 VAL C C N N 464 VAL O O N N 465 VAL CB C N N 466 VAL CG1 C N N 467 VAL CG2 C N N 468 VAL OXT O N N 469 VAL H H N N 470 VAL H2 H N N 471 VAL HA H N N 472 VAL HB H N N 473 VAL HG11 H N N 474 VAL HG12 H N N 475 VAL HG13 H N N 476 VAL HG21 H N N 477 VAL HG22 H N N 478 VAL HG23 H N N 479 VAL HXT H N N 480 Z9M N2 N N N 481 Z9M P1 P N N 482 Z9M O6 O N N 483 Z9M O1 O N N 484 Z9M O3 O N N 485 Z9M C1 C N R 486 Z9M O4 O N N 487 Z9M C2 C N R 488 Z9M O5 O N N 489 Z9M C3 C N R 490 Z9M O9 O N N 491 Z9M C4 C N S 492 Z9M O7 O N N 493 Z9M C5 C N R 494 Z9M O8 O N N 495 Z9M C6 C N N 496 Z9M HN21 H N N 497 Z9M HN22 H N N 498 Z9M HO1 H N N 499 Z9M HO3 H N N 500 Z9M H1 H N N 501 Z9M H2 H N N 502 Z9M H3 H N N 503 Z9M H4 H N N 504 Z9M H7O H N N 505 Z9M H5 H N N 506 Z9M H8O H N N 507 Z9M H61 H N N 508 Z9M H62 H N N 509 Z9M HO6 H N N 510 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GP1 C1 C2 sing N N 129 GP1 C1 O1 sing N N 130 GP1 C1 O5 sing N N 131 GP1 C1 H1 sing N N 132 GP1 C2 C3 sing N N 133 GP1 C2 N2 sing N N 134 GP1 C2 H2 sing N N 135 GP1 C3 C4 sing N N 136 GP1 C3 O3 sing N N 137 GP1 C3 H3 sing N N 138 GP1 C4 C5 sing N N 139 GP1 C4 O4 sing N N 140 GP1 C4 H4 sing N N 141 GP1 C5 C6 sing N N 142 GP1 C5 O5 sing N N 143 GP1 C5 H5 sing N N 144 GP1 C6 O6 sing N N 145 GP1 C6 H61 sing N N 146 GP1 C6 H62 sing N N 147 GP1 N2 HN21 sing N N 148 GP1 N2 HN22 sing N N 149 GP1 O1 P4B sing N N 150 GP1 O3 HO3 sing N N 151 GP1 O4 HO4 sing N N 152 GP1 O6 HO6 sing N N 153 GP1 O7B P4B sing N N 154 GP1 O7B HOP1 sing N N 155 GP1 P4B O8B doub N N 156 GP1 P4B O9B sing N N 157 GP1 O9B HOP2 sing N N 158 HIS N CA sing N N 159 HIS N H sing N N 160 HIS N H2 sing N N 161 HIS CA C sing N N 162 HIS CA CB sing N N 163 HIS CA HA sing N N 164 HIS C O doub N N 165 HIS C OXT sing N N 166 HIS CB CG sing N N 167 HIS CB HB2 sing N N 168 HIS CB HB3 sing N N 169 HIS CG ND1 sing Y N 170 HIS CG CD2 doub Y N 171 HIS ND1 CE1 doub Y N 172 HIS ND1 HD1 sing N N 173 HIS CD2 NE2 sing Y N 174 HIS CD2 HD2 sing N N 175 HIS CE1 NE2 sing Y N 176 HIS CE1 HE1 sing N N 177 HIS NE2 HE2 sing N N 178 HIS OXT HXT sing N N 179 HOH O H1 sing N N 180 HOH O H2 sing N N 181 ILE N CA sing N N 182 ILE N H sing N N 183 ILE N H2 sing N N 184 ILE CA C sing N N 185 ILE CA CB sing N N 186 ILE CA HA sing N N 187 ILE C O doub N N 188 ILE C OXT sing N N 189 ILE CB CG1 sing N N 190 ILE CB CG2 sing N N 191 ILE CB HB sing N N 192 ILE CG1 CD1 sing N N 193 ILE CG1 HG12 sing N N 194 ILE CG1 HG13 sing N N 195 ILE CG2 HG21 sing N N 196 ILE CG2 HG22 sing N N 197 ILE CG2 HG23 sing N N 198 ILE CD1 HD11 sing N N 199 ILE CD1 HD12 sing N N 200 ILE CD1 HD13 sing N N 201 ILE OXT HXT sing N N 202 KDO C1 O1A doub N N 203 KDO C1 O1B sing N N 204 KDO C1 C2 sing N N 205 KDO O1B HO1B sing N N 206 KDO C2 O2 sing N N 207 KDO C2 C3 sing N N 208 KDO C2 O6 sing N N 209 KDO O2 HO2 sing N N 210 KDO C3 C4 sing N N 211 KDO C3 H31 sing N N 212 KDO C3 H32 sing N N 213 KDO C4 O4 sing N N 214 KDO C4 C5 sing N N 215 KDO C4 H4 sing N N 216 KDO O4 HO4 sing N N 217 KDO C5 O5 sing N N 218 KDO C5 C6 sing N N 219 KDO C5 H5 sing N N 220 KDO O5 HO5 sing N N 221 KDO C6 O6 sing N N 222 KDO C6 C7 sing N N 223 KDO C6 H6 sing N N 224 KDO C7 O7 sing N N 225 KDO C7 C8 sing N N 226 KDO C7 H7 sing N N 227 KDO O7 HO7 sing N N 228 KDO C8 O8 sing N N 229 KDO C8 H81 sing N N 230 KDO C8 H82 sing N N 231 KDO O8 HO8 sing N N 232 LEU N CA sing N N 233 LEU N H sing N N 234 LEU N H2 sing N N 235 LEU CA C sing N N 236 LEU CA CB sing N N 237 LEU CA HA sing N N 238 LEU C O doub N N 239 LEU C OXT sing N N 240 LEU CB CG sing N N 241 LEU CB HB2 sing N N 242 LEU CB HB3 sing N N 243 LEU CG CD1 sing N N 244 LEU CG CD2 sing N N 245 LEU CG HG sing N N 246 LEU CD1 HD11 sing N N 247 LEU CD1 HD12 sing N N 248 LEU CD1 HD13 sing N N 249 LEU CD2 HD21 sing N N 250 LEU CD2 HD22 sing N N 251 LEU CD2 HD23 sing N N 252 LEU OXT HXT sing N N 253 LYS N CA sing N N 254 LYS N H sing N N 255 LYS N H2 sing N N 256 LYS CA C sing N N 257 LYS CA CB sing N N 258 LYS CA HA sing N N 259 LYS C O doub N N 260 LYS C OXT sing N N 261 LYS CB CG sing N N 262 LYS CB HB2 sing N N 263 LYS CB HB3 sing N N 264 LYS CG CD sing N N 265 LYS CG HG2 sing N N 266 LYS CG HG3 sing N N 267 LYS CD CE sing N N 268 LYS CD HD2 sing N N 269 LYS CD HD3 sing N N 270 LYS CE NZ sing N N 271 LYS CE HE2 sing N N 272 LYS CE HE3 sing N N 273 LYS NZ HZ1 sing N N 274 LYS NZ HZ2 sing N N 275 LYS NZ HZ3 sing N N 276 LYS OXT HXT sing N N 277 MET N CA sing N N 278 MET N H sing N N 279 MET N H2 sing N N 280 MET CA C sing N N 281 MET CA CB sing N N 282 MET CA HA sing N N 283 MET C O doub N N 284 MET C OXT sing N N 285 MET CB CG sing N N 286 MET CB HB2 sing N N 287 MET CB HB3 sing N N 288 MET CG SD sing N N 289 MET CG HG2 sing N N 290 MET CG HG3 sing N N 291 MET SD CE sing N N 292 MET CE HE1 sing N N 293 MET CE HE2 sing N N 294 MET CE HE3 sing N N 295 MET OXT HXT sing N N 296 NAG C1 C2 sing N N 297 NAG C1 O1 sing N N 298 NAG C1 O5 sing N N 299 NAG C1 H1 sing N N 300 NAG C2 C3 sing N N 301 NAG C2 N2 sing N N 302 NAG C2 H2 sing N N 303 NAG C3 C4 sing N N 304 NAG C3 O3 sing N N 305 NAG C3 H3 sing N N 306 NAG C4 C5 sing N N 307 NAG C4 O4 sing N N 308 NAG C4 H4 sing N N 309 NAG C5 C6 sing N N 310 NAG C5 O5 sing N N 311 NAG C5 H5 sing N N 312 NAG C6 O6 sing N N 313 NAG C6 H61 sing N N 314 NAG C6 H62 sing N N 315 NAG C7 C8 sing N N 316 NAG C7 N2 sing N N 317 NAG C7 O7 doub N N 318 NAG C8 H81 sing N N 319 NAG C8 H82 sing N N 320 NAG C8 H83 sing N N 321 NAG N2 HN2 sing N N 322 NAG O1 HO1 sing N N 323 NAG O3 HO3 sing N N 324 NAG O4 HO4 sing N N 325 NAG O6 HO6 sing N N 326 PHE N CA sing N N 327 PHE N H sing N N 328 PHE N H2 sing N N 329 PHE CA C sing N N 330 PHE CA CB sing N N 331 PHE CA HA sing N N 332 PHE C O doub N N 333 PHE C OXT sing N N 334 PHE CB CG sing N N 335 PHE CB HB2 sing N N 336 PHE CB HB3 sing N N 337 PHE CG CD1 doub Y N 338 PHE CG CD2 sing Y N 339 PHE CD1 CE1 sing Y N 340 PHE CD1 HD1 sing N N 341 PHE CD2 CE2 doub Y N 342 PHE CD2 HD2 sing N N 343 PHE CE1 CZ doub Y N 344 PHE CE1 HE1 sing N N 345 PHE CE2 CZ sing Y N 346 PHE CE2 HE2 sing N N 347 PHE CZ HZ sing N N 348 PHE OXT HXT sing N N 349 PRO N CA sing N N 350 PRO N CD sing N N 351 PRO N H sing N N 352 PRO CA C sing N N 353 PRO CA CB sing N N 354 PRO CA HA sing N N 355 PRO C O doub N N 356 PRO C OXT sing N N 357 PRO CB CG sing N N 358 PRO CB HB2 sing N N 359 PRO CB HB3 sing N N 360 PRO CG CD sing N N 361 PRO CG HG2 sing N N 362 PRO CG HG3 sing N N 363 PRO CD HD2 sing N N 364 PRO CD HD3 sing N N 365 PRO OXT HXT sing N N 366 SER N CA sing N N 367 SER N H sing N N 368 SER N H2 sing N N 369 SER CA C sing N N 370 SER CA CB sing N N 371 SER CA HA sing N N 372 SER C O doub N N 373 SER C OXT sing N N 374 SER CB OG sing N N 375 SER CB HB2 sing N N 376 SER CB HB3 sing N N 377 SER OG HG sing N N 378 SER OXT HXT sing N N 379 THR N CA sing N N 380 THR N H sing N N 381 THR N H2 sing N N 382 THR CA C sing N N 383 THR CA CB sing N N 384 THR CA HA sing N N 385 THR C O doub N N 386 THR C OXT sing N N 387 THR CB OG1 sing N N 388 THR CB CG2 sing N N 389 THR CB HB sing N N 390 THR OG1 HG1 sing N N 391 THR CG2 HG21 sing N N 392 THR CG2 HG22 sing N N 393 THR CG2 HG23 sing N N 394 THR OXT HXT sing N N 395 TRP N CA sing N N 396 TRP N H sing N N 397 TRP N H2 sing N N 398 TRP CA C sing N N 399 TRP CA CB sing N N 400 TRP CA HA sing N N 401 TRP C O doub N N 402 TRP C OXT sing N N 403 TRP CB CG sing N N 404 TRP CB HB2 sing N N 405 TRP CB HB3 sing N N 406 TRP CG CD1 doub Y N 407 TRP CG CD2 sing Y N 408 TRP CD1 NE1 sing Y N 409 TRP CD1 HD1 sing N N 410 TRP CD2 CE2 doub Y N 411 TRP CD2 CE3 sing Y N 412 TRP NE1 CE2 sing Y N 413 TRP NE1 HE1 sing N N 414 TRP CE2 CZ2 sing Y N 415 TRP CE3 CZ3 doub Y N 416 TRP CE3 HE3 sing N N 417 TRP CZ2 CH2 doub Y N 418 TRP CZ2 HZ2 sing N N 419 TRP CZ3 CH2 sing Y N 420 TRP CZ3 HZ3 sing N N 421 TRP CH2 HH2 sing N N 422 TRP OXT HXT sing N N 423 TYR N CA sing N N 424 TYR N H sing N N 425 TYR N H2 sing N N 426 TYR CA C sing N N 427 TYR CA CB sing N N 428 TYR CA HA sing N N 429 TYR C O doub N N 430 TYR C OXT sing N N 431 TYR CB CG sing N N 432 TYR CB HB2 sing N N 433 TYR CB HB3 sing N N 434 TYR CG CD1 doub Y N 435 TYR CG CD2 sing Y N 436 TYR CD1 CE1 sing Y N 437 TYR CD1 HD1 sing N N 438 TYR CD2 CE2 doub Y N 439 TYR CD2 HD2 sing N N 440 TYR CE1 CZ doub Y N 441 TYR CE1 HE1 sing N N 442 TYR CE2 CZ sing Y N 443 TYR CE2 HE2 sing N N 444 TYR CZ OH sing N N 445 TYR OH HH sing N N 446 TYR OXT HXT sing N N 447 VAL N CA sing N N 448 VAL N H sing N N 449 VAL N H2 sing N N 450 VAL CA C sing N N 451 VAL CA CB sing N N 452 VAL CA HA sing N N 453 VAL C O doub N N 454 VAL C OXT sing N N 455 VAL CB CG1 sing N N 456 VAL CB CG2 sing N N 457 VAL CB HB sing N N 458 VAL CG1 HG11 sing N N 459 VAL CG1 HG12 sing N N 460 VAL CG1 HG13 sing N N 461 VAL CG2 HG21 sing N N 462 VAL CG2 HG22 sing N N 463 VAL CG2 HG23 sing N N 464 VAL OXT HXT sing N N 465 Z9M C2 N2 sing N N 466 Z9M N2 HN21 sing N N 467 Z9M N2 HN22 sing N N 468 Z9M O9 P1 doub N N 469 Z9M P1 O7 sing N N 470 Z9M P1 O4 sing N N 471 Z9M P1 O8 sing N N 472 Z9M C6 O6 sing N N 473 Z9M C1 O1 sing N N 474 Z9M O1 HO1 sing N N 475 Z9M C3 O3 sing N N 476 Z9M O3 HO3 sing N N 477 Z9M O5 C1 sing N N 478 Z9M C1 C2 sing N N 479 Z9M C1 H1 sing N N 480 Z9M O4 C4 sing N N 481 Z9M C3 C2 sing N N 482 Z9M C2 H2 sing N N 483 Z9M C5 O5 sing N N 484 Z9M C4 C3 sing N N 485 Z9M C3 H3 sing N N 486 Z9M C4 C5 sing N N 487 Z9M C4 H4 sing N N 488 Z9M O7 H7O sing N N 489 Z9M C6 C5 sing N N 490 Z9M C5 H5 sing N N 491 Z9M O8 H8O sing N N 492 Z9M C6 H61 sing N N 493 Z9M C6 H62 sing N N 494 Z9M O6 HO6 sing N N 495 # _pdbx_audit_support.funding_organization 'Natural Sciences and Engineering Research Council (NSERC, Canada)' _pdbx_audit_support.country Canada _pdbx_audit_support.grant_number 'Discovery Grant 171356-2013' _pdbx_audit_support.ordinal 1 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 GP1 1 A GP1 1 A KDP 1 n C 3 Z9M 2 A Z9M 2 A KDP 1 n C 3 KDO 3 A KDO 3 A KDP 1 n C 3 KDO 4 A KDO 4 A KDP 1 n C 3 KDO 5 A KDO 5 A KDP 1 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GP1 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Glcp1PO3N KDO 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DKdopa KDO 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Kdop KDO 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Kdo NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc Z9M 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpN4PO3 # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 'WURCS=2.0/3,5,4/[a2122h-1a_1-5_1*OPO/3O/3=O_2*N][a2122h-1b_1-5_2*N_4*OPO/3O/3=O][Aad1122h-2a_2-6]/1-2-3-3-3/a6-b1_b6-c2_c4-d2_d8-e2' WURCS PDB2Glycan 1.1.0 2 3 '[][P]{[(0+1)][a-D-GlcpN]{[(6+1)][b-D-GlcpN]{[(4+0)][P]{}[(6+2)][a-D-Kdop]{[(4+2)][a-D-Kdop]{[(8+2)][a-D-Kdop]{}}}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 3 2 Z9M C1 O1 1 GP1 O6 HO6 sing ? 2 3 3 KDO C2 O2 2 Z9M O6 HO6 sing ? 3 3 4 KDO C2 O2 3 KDO O4 HO4 sing ? 4 3 5 KDO C2 O2 4 KDO O8 HO8 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 GP1 1 n 3 Z9M 2 n 3 KDO 3 n 3 KDO 4 n 3 KDO 5 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4M7J _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support homology _pdbx_struct_assembly_auth_evidence.details ? #