data_6D3O # _entry.id 6D3O # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6D3O pdb_00006d3o 10.2210/pdb6d3o/pdb WWPDB D_1000233773 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6D3O _pdbx_database_status.recvd_initial_deposition_date 2018-04-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Thomas, N.C.' 1 0000-0002-7200-8015 'Forest, K.T.' 2 0000-0003-4197-7662 'Gellman, S.H.' 3 0000-0001-5617-0058 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'High-Resolution Structures for a Complex Between a Non-Helical Foldamer and VEGF' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Thomas, N.C.' 1 0000-0002-7200-8015 primary 'London, H.S.' 2 ? primary 'Forest, K.T.' 3 0000-0003-4197-7662 primary 'Gellman, S.H.' 4 0000-0001-5617-0058 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 6D3O _cell.details ? _cell.formula_units_Z ? _cell.length_a 101.649 _cell.length_a_esd ? _cell.length_b 101.649 _cell.length_b_esd ? _cell.length_c 59.988 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6D3O _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Vascular endothelial growth factor A' 11862.497 1 ? ? 'residues 34-135' ? 2 polymer man 'Vascular endothelial growth factor A' 11948.680 1 ? ? 'residues 34-135' ? 3 polymer syn 'HH4 alpha/beta-Peptide' 1992.283 2 ? ? ? ? 4 water nat water 18.015 2 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'VEGF-A,Vascular permeability factor,VPF' 2 'VEGF-A,Vascular permeability factor,VPF' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GQNHHEVVKFMDVYQQSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQ GEHIGEMSFLQHNKCECRPKAD ; ;GQNHHEVVKFMDVYQQSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQ GEHIGEMSFLQHNKCECRPKAD ; A ? 2 'polypeptide(L)' no no ;GQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQ GQHIGEMSFLQHNKCECRPKKD ; ;GQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQ GQHIGEMSFLQHNKCECRPKKD ; B ? 3 'polypeptide(L)' no yes 'NCDIHV(NLE)(HT7)EW(B3E)CF(XPC)R' NCDIHVLWEWECFXR C,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLN n 1 3 ASN n 1 4 HIS n 1 5 HIS n 1 6 GLU n 1 7 VAL n 1 8 VAL n 1 9 LYS n 1 10 PHE n 1 11 MET n 1 12 ASP n 1 13 VAL n 1 14 TYR n 1 15 GLN n 1 16 GLN n 1 17 SER n 1 18 TYR n 1 19 CYS n 1 20 HIS n 1 21 PRO n 1 22 ILE n 1 23 GLU n 1 24 THR n 1 25 LEU n 1 26 VAL n 1 27 ASP n 1 28 ILE n 1 29 PHE n 1 30 GLN n 1 31 GLU n 1 32 TYR n 1 33 PRO n 1 34 ASP n 1 35 GLU n 1 36 ILE n 1 37 GLU n 1 38 TYR n 1 39 ILE n 1 40 PHE n 1 41 LYS n 1 42 PRO n 1 43 SER n 1 44 CYS n 1 45 VAL n 1 46 PRO n 1 47 LEU n 1 48 MET n 1 49 ARG n 1 50 CYS n 1 51 GLY n 1 52 GLY n 1 53 CYS n 1 54 CYS n 1 55 ASN n 1 56 ASP n 1 57 GLU n 1 58 GLY n 1 59 LEU n 1 60 GLU n 1 61 CYS n 1 62 VAL n 1 63 PRO n 1 64 THR n 1 65 GLU n 1 66 GLU n 1 67 SER n 1 68 ASN n 1 69 ILE n 1 70 THR n 1 71 MET n 1 72 GLN n 1 73 ILE n 1 74 MET n 1 75 ARG n 1 76 ILE n 1 77 LYS n 1 78 PRO n 1 79 HIS n 1 80 GLN n 1 81 GLY n 1 82 GLU n 1 83 HIS n 1 84 ILE n 1 85 GLY n 1 86 GLU n 1 87 MET n 1 88 SER n 1 89 PHE n 1 90 LEU n 1 91 GLN n 1 92 HIS n 1 93 ASN n 1 94 LYS n 1 95 CYS n 1 96 GLU n 1 97 CYS n 1 98 ARG n 1 99 PRO n 1 100 LYS n 1 101 ALA n 1 102 ASP n 2 1 GLY n 2 2 GLN n 2 3 ASN n 2 4 HIS n 2 5 HIS n 2 6 GLU n 2 7 VAL n 2 8 VAL n 2 9 LYS n 2 10 PHE n 2 11 MET n 2 12 ASP n 2 13 VAL n 2 14 TYR n 2 15 GLN n 2 16 ARG n 2 17 SER n 2 18 TYR n 2 19 CYS n 2 20 HIS n 2 21 PRO n 2 22 ILE n 2 23 GLU n 2 24 THR n 2 25 LEU n 2 26 VAL n 2 27 ASP n 2 28 ILE n 2 29 PHE n 2 30 GLN n 2 31 GLU n 2 32 TYR n 2 33 PRO n 2 34 ASP n 2 35 GLU n 2 36 ILE n 2 37 GLU n 2 38 TYR n 2 39 ILE n 2 40 PHE n 2 41 LYS n 2 42 PRO n 2 43 SER n 2 44 CYS n 2 45 VAL n 2 46 PRO n 2 47 LEU n 2 48 MET n 2 49 ARG n 2 50 CYS n 2 51 GLY n 2 52 GLY n 2 53 CYS n 2 54 CYS n 2 55 ASN n 2 56 ASP n 2 57 GLU n 2 58 GLY n 2 59 LEU n 2 60 GLU n 2 61 CYS n 2 62 VAL n 2 63 PRO n 2 64 THR n 2 65 GLU n 2 66 GLU n 2 67 SER n 2 68 ASN n 2 69 ILE n 2 70 THR n 2 71 MET n 2 72 GLN n 2 73 ILE n 2 74 MET n 2 75 ARG n 2 76 ILE n 2 77 LYS n 2 78 PRO n 2 79 HIS n 2 80 GLN n 2 81 GLY n 2 82 GLN n 2 83 HIS n 2 84 ILE n 2 85 GLY n 2 86 GLU n 2 87 MET n 2 88 SER n 2 89 PHE n 2 90 LEU n 2 91 GLN n 2 92 HIS n 2 93 ASN n 2 94 LYS n 2 95 CYS n 2 96 GLU n 2 97 CYS n 2 98 ARG n 2 99 PRO n 2 100 LYS n 2 101 LYS n 2 102 ASP n 3 1 ASN n 3 2 CYS n 3 3 ASP n 3 4 ILE n 3 5 HIS n 3 6 VAL n 3 7 NLE n 3 8 HT7 n 3 9 GLU n 3 10 TRP n 3 11 B3E n 3 12 CYS n 3 13 PHE n 3 14 XPC n 3 15 ARG n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 102 human ? 'VEGFA, VEGF' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 102 human ? 'VEGFA, VEGF' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _pdbx_entity_src_syn.entity_id 3 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 15 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP VEGFA_HUMAN P15692 ? 1 ;GQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQ GQHIGEMSFLQHNKCECRPKKD ; 34 2 UNP VEGFA_HUMAN P15692 ? 2 ;GQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQ GQHIGEMSFLQHNKCECRPKKD ; 34 3 PDB 6D3O 6D3O ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6D3O A 1 ? 102 ? P15692 34 ? 135 ? 8 109 2 2 6D3O B 1 ? 102 ? P15692 34 ? 135 ? 8 109 3 3 6D3O C 1 ? 15 ? 6D3O 4 ? 18 ? 4 18 4 3 6D3O D 1 ? 15 ? 6D3O 4 ? 18 ? 4 18 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6D3O GLN A 16 ? UNP P15692 ARG 49 conflict 23 1 1 6D3O GLU A 82 ? UNP P15692 GLN 115 conflict 89 2 1 6D3O ALA A 101 ? UNP P15692 LYS 134 conflict 108 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 B3E 'L-peptide linking' n '(3S)-3-AMINOHEXANEDIOIC ACID' ? 'C6 H11 N O4' 161.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 HT7 'L-peptide linking' n '(3S)-3-AMINO-4-(1H-INDOL-3-YL)BUTANOIC ACID' BETA-HOMOTRYPTOPHAN 'C12 H14 N2 O2' 218.252 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NLE 'L-peptide linking' n NORLEUCINE ? 'C6 H13 N O2' 131.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 XPC peptide-like . '(3S,4R)-4-aminopyrrolidine-3-carboxylic acid' '(3R,4S)-3-Aminopyrrolidine-4-carboxylic acid' 'C5 H10 N2 O2' 130.145 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6D3O _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.22 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 61.76 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M ammonium acetate, 0.1 M BIS-TRIS pH 5.5, 17% w/v PEG 10000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-03-18 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97872 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 21-ID-F' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97872 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 21-ID-F _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 66.6 _reflns.entry_id 6D3O _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.0 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 7198 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.1 _reflns.pdbx_Rmerge_I_obs 0.149 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 13.0 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.156 _reflns.pdbx_Rpim_I_all 0.047 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.997 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 3.00 _reflns_shell.d_res_low 3.18 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.7 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1029 _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.43 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 11.3 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 1.5 _reflns_shell.pdbx_Rpim_I_all 0.443 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.67 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -1.0600 _refine.aniso_B[1][2] -0.5300 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][2] -1.0600 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 3.4400 _refine.B_iso_max 159.770 _refine.B_iso_mean 77.4050 _refine.B_iso_min 51.330 _refine.correlation_coeff_Fo_to_Fc 0.9220 _refine.correlation_coeff_Fo_to_Fc_free 0.8770 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6D3O _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.1000 _refine.ls_d_res_low 33.2900 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 6255 _refine.ls_number_reflns_R_free 279 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.9400 _refine.ls_percent_reflns_R_free 4.3000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2192 _refine.ls_R_factor_R_free 0.2789 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2166 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1VPF _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.4600 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 39.6820 _refine.overall_SU_ML 0.3600 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 3.1000 _refine_hist.d_res_low 33.2900 _refine_hist.number_atoms_solvent 2 _refine_hist.number_atoms_total 1722 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 218 _refine_hist.pdbx_B_iso_mean_ligand 96.45 _refine_hist.pdbx_B_iso_mean_solvent 60.58 _refine_hist.pdbx_number_atoms_protein 1712 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 0.013 1772 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.018 1591 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.353 1.703 2404 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.065 1.629 3688 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.194 5.000 204 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 35.537 23.704 81 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 14.436 15.000 276 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 22.188 15.000 6 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.046 0.200 235 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 0.019 1954 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 382 ? r_gen_planes_other ? ? # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight _refine_ls_restr_ncs.pdbx_ens_id 'X-RAY DIFFRACTION' 1 ? ? 0.120 ? 0.050 1 'interatomic distance' ? A 2321 ? ? 1 'X-RAY DIFFRACTION' 2 ? ? 0.120 ? 0.050 2 'interatomic distance' ? B 2321 ? ? 1 # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 3.1000 _refine_ls_shell.d_res_low 3.1800 _refine_ls_shell.number_reflns_all 477 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 15 _refine_ls_shell.number_reflns_R_work 462 _refine_ls_shell.percent_reflns_obs 100.0000 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3030 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.3050 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.details _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.vector[2] _struct_ncs_oper.vector[3] 1 given ? 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 2 given ? -0.901000 0.074558 -0.427365 0.070948 -0.946533 -0.314710 -0.427979 -0.313875 0.847536 51.24354 -74.59712 -1.40020 3 given ? 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 4 given ? -0.943656 0.047152 -0.327552 0.046021 -0.961481 -0.270991 -0.327713 -0.270796 0.905137 51.10066 -74.64796 -1.69968 # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 0 A GLU 6 . A PRO 99 . A GLU 13 A PRO 106 0 ? 1 2 0 B GLU 6 . B PRO 99 . B GLU 13 B PRO 106 0 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 6D3O _struct.title ;Crystal Structure of Vascular Endothelial Growth Factor (VEGF8-109) with HH4, an alpha/beta-Peptide with Irregular Secondary Structure ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6D3O _struct_keywords.text 'alpha/beta-peptide, VEGF, PROTEIN BINDING' _struct_keywords.pdbx_keywords 'PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS A 9 ? TYR A 18 ? LYS A 16 TYR A 25 1 ? 10 HELX_P HELX_P2 AA2 PHE A 29 ? GLU A 31 ? PHE A 36 GLU A 38 5 ? 3 HELX_P HELX_P3 AA3 LYS B 9 ? TYR B 18 ? LYS B 16 TYR B 25 1 ? 10 HELX_P HELX_P4 AA4 PHE B 29 ? GLU B 31 ? PHE B 36 GLU B 38 5 ? 3 HELX_P HELX_P5 AA5 GLU C 9 ? XPC C 14 ? GLU C 12 XPC C 17 1 ? 6 HELX_P HELX_P6 AA6 GLU D 9 ? XPC D 14 ? GLU D 12 XPC D 17 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 19 SG ? ? ? 1_555 A CYS 61 SG ? ? A CYS 26 A CYS 68 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf2 disulf ? ? A CYS 50 SG ? ? ? 1_555 A CYS 95 SG ? ? A CYS 57 A CYS 102 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf3 disulf ? ? A CYS 54 SG ? ? ? 1_555 A CYS 97 SG ? ? A CYS 61 A CYS 104 1_555 ? ? ? ? ? ? ? 2.047 ? ? disulf4 disulf ? ? B CYS 19 SG ? ? ? 1_555 B CYS 61 SG ? ? B CYS 26 B CYS 68 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf5 disulf ? ? B CYS 50 SG ? ? ? 1_555 B CYS 95 SG ? ? B CYS 57 B CYS 102 1_555 ? ? ? ? ? ? ? 2.044 ? ? disulf6 disulf ? ? B CYS 54 SG ? ? ? 1_555 B CYS 97 SG ? ? B CYS 61 B CYS 104 1_555 ? ? ? ? ? ? ? 2.053 ? ? disulf7 disulf ? ? C CYS 2 SG ? ? ? 1_555 C CYS 12 SG ? ? C CYS 5 C CYS 15 1_555 ? ? ? ? ? ? ? 2.040 ? ? covale1 covale both ? C VAL 6 C ? ? ? 1_555 C NLE 7 N ? ? C VAL 9 C NLE 10 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale2 covale both ? C NLE 7 C ? ? ? 1_555 C HT7 8 N ? ? C NLE 10 C HT7 11 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale3 covale both ? C HT7 8 C ? ? ? 1_555 C GLU 9 N ? ? C HT7 11 C GLU 12 1_555 ? ? ? ? ? ? ? 1.364 ? ? covale4 covale both ? C TRP 10 C ? ? ? 1_555 C B3E 11 N ? ? C TRP 13 C B3E 14 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale5 covale both ? C B3E 11 C ? ? ? 1_555 C CYS 12 N ? ? C B3E 14 C CYS 15 1_555 ? ? ? ? ? ? ? 1.373 ? ? covale6 covale both ? C PHE 13 C ? ? ? 1_555 C XPC 14 N ? ? C PHE 16 C XPC 17 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale7 covale both ? C XPC 14 C ? ? ? 1_555 C ARG 15 N ? ? C XPC 17 C ARG 18 1_555 ? ? ? ? ? ? ? 1.366 ? ? covale8 covale both ? D VAL 6 C ? ? ? 1_555 D NLE 7 N ? ? D VAL 9 D NLE 10 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale9 covale both ? D NLE 7 C ? ? ? 1_555 D HT7 8 N ? ? D NLE 10 D HT7 11 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale10 covale both ? D HT7 8 C ? ? ? 1_555 D GLU 9 N ? ? D HT7 11 D GLU 12 1_555 ? ? ? ? ? ? ? 1.365 ? ? covale11 covale both ? D TRP 10 C ? ? ? 1_555 D B3E 11 N ? ? D TRP 13 D B3E 14 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale12 covale both ? D B3E 11 C ? ? ? 1_555 D CYS 12 N ? ? D B3E 14 D CYS 15 1_555 ? ? ? ? ? ? ? 1.367 ? ? covale13 covale both ? D PHE 13 C ? ? ? 1_555 D XPC 14 N ? ? D PHE 16 D XPC 17 1_555 ? ? ? ? ? ? ? 1.335 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LYS 41 A . ? LYS 48 A PRO 42 A ? PRO 49 A 1 -8.04 2 LYS 41 B . ? LYS 48 B PRO 42 B ? PRO 49 B 1 -7.15 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 3 ? AA3 ? 2 ? AA4 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 HIS A 20 ? ASP A 27 ? HIS A 27 ASP A 34 AA1 2 CYS A 44 ? GLY A 51 ? CYS A 51 GLY A 58 AA2 1 ILE A 39 ? LYS A 41 ? ILE A 46 LYS A 48 AA2 2 LEU A 59 ? LYS A 77 ? LEU A 66 LYS A 84 AA2 3 GLY A 81 ? PRO A 99 ? GLY A 88 PRO A 106 AA3 1 HIS B 20 ? ASP B 27 ? HIS B 27 ASP B 34 AA3 2 CYS B 44 ? GLY B 51 ? CYS B 51 GLY B 58 AA4 1 ILE B 39 ? LYS B 41 ? ILE B 46 LYS B 48 AA4 2 LEU B 59 ? LYS B 77 ? LEU B 66 LYS B 84 AA4 3 GLY B 81 ? PRO B 99 ? GLY B 88 PRO B 106 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 24 ? N THR A 31 O LEU A 47 ? O LEU A 54 AA2 1 2 N ILE A 39 ? N ILE A 46 O ILE A 76 ? O ILE A 83 AA2 2 3 N ARG A 75 ? N ARG A 82 O HIS A 83 ? O HIS A 90 AA3 1 2 N THR B 24 ? N THR B 31 O LEU B 47 ? O LEU B 54 AA4 1 2 N ILE B 39 ? N ILE B 46 O ILE B 76 ? O ILE B 83 AA4 2 3 N ARG B 75 ? N ARG B 82 O HIS B 83 ? O HIS B 90 # _atom_sites.entry_id 6D3O _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.009838 _atom_sites.fract_transf_matrix[1][2] 0.005680 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011360 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016670 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 8 ? ? ? A . n A 1 2 GLN 2 9 ? ? ? A . n A 1 3 ASN 3 10 ? ? ? A . n A 1 4 HIS 4 11 ? ? ? A . n A 1 5 HIS 5 12 ? ? ? A . n A 1 6 GLU 6 13 13 GLU GLU A . n A 1 7 VAL 7 14 14 VAL VAL A . n A 1 8 VAL 8 15 15 VAL VAL A . n A 1 9 LYS 9 16 16 LYS LYS A . n A 1 10 PHE 10 17 17 PHE PHE A . n A 1 11 MET 11 18 18 MET MET A . n A 1 12 ASP 12 19 19 ASP ASP A . n A 1 13 VAL 13 20 20 VAL VAL A . n A 1 14 TYR 14 21 21 TYR TYR A . n A 1 15 GLN 15 22 22 GLN GLN A . n A 1 16 GLN 16 23 23 GLN GLN A . n A 1 17 SER 17 24 24 SER SER A . n A 1 18 TYR 18 25 25 TYR TYR A . n A 1 19 CYS 19 26 26 CYS CYS A . n A 1 20 HIS 20 27 27 HIS HIS A . n A 1 21 PRO 21 28 28 PRO PRO A . n A 1 22 ILE 22 29 29 ILE ILE A . n A 1 23 GLU 23 30 30 GLU GLU A . n A 1 24 THR 24 31 31 THR THR A . n A 1 25 LEU 25 32 32 LEU LEU A . n A 1 26 VAL 26 33 33 VAL VAL A . n A 1 27 ASP 27 34 34 ASP ASP A . n A 1 28 ILE 28 35 35 ILE ILE A . n A 1 29 PHE 29 36 36 PHE PHE A . n A 1 30 GLN 30 37 37 GLN GLN A . n A 1 31 GLU 31 38 38 GLU GLU A . n A 1 32 TYR 32 39 39 TYR TYR A . n A 1 33 PRO 33 40 40 PRO PRO A . n A 1 34 ASP 34 41 41 ASP ASP A . n A 1 35 GLU 35 42 42 GLU GLU A . n A 1 36 ILE 36 43 43 ILE ILE A . n A 1 37 GLU 37 44 44 GLU GLU A . n A 1 38 TYR 38 45 45 TYR TYR A . n A 1 39 ILE 39 46 46 ILE ILE A . n A 1 40 PHE 40 47 47 PHE PHE A . n A 1 41 LYS 41 48 48 LYS LYS A . n A 1 42 PRO 42 49 49 PRO PRO A . n A 1 43 SER 43 50 50 SER SER A . n A 1 44 CYS 44 51 51 CYS CYS A . n A 1 45 VAL 45 52 52 VAL VAL A . n A 1 46 PRO 46 53 53 PRO PRO A . n A 1 47 LEU 47 54 54 LEU LEU A . n A 1 48 MET 48 55 55 MET MET A . n A 1 49 ARG 49 56 56 ARG ARG A . n A 1 50 CYS 50 57 57 CYS CYS A . n A 1 51 GLY 51 58 58 GLY GLY A . n A 1 52 GLY 52 59 59 GLY GLY A . n A 1 53 CYS 53 60 60 CYS CYS A . n A 1 54 CYS 54 61 61 CYS CYS A . n A 1 55 ASN 55 62 62 ASN ASN A . n A 1 56 ASP 56 63 63 ASP ASP A . n A 1 57 GLU 57 64 64 GLU GLU A . n A 1 58 GLY 58 65 65 GLY GLY A . n A 1 59 LEU 59 66 66 LEU LEU A . n A 1 60 GLU 60 67 67 GLU GLU A . n A 1 61 CYS 61 68 68 CYS CYS A . n A 1 62 VAL 62 69 69 VAL VAL A . n A 1 63 PRO 63 70 70 PRO PRO A . n A 1 64 THR 64 71 71 THR THR A . n A 1 65 GLU 65 72 72 GLU GLU A . n A 1 66 GLU 66 73 73 GLU GLU A . n A 1 67 SER 67 74 74 SER SER A . n A 1 68 ASN 68 75 75 ASN ASN A . n A 1 69 ILE 69 76 76 ILE ILE A . n A 1 70 THR 70 77 77 THR THR A . n A 1 71 MET 71 78 78 MET MET A . n A 1 72 GLN 72 79 79 GLN GLN A . n A 1 73 ILE 73 80 80 ILE ILE A . n A 1 74 MET 74 81 81 MET MET A . n A 1 75 ARG 75 82 82 ARG ARG A . n A 1 76 ILE 76 83 83 ILE ILE A . n A 1 77 LYS 77 84 84 LYS LYS A . n A 1 78 PRO 78 85 85 PRO PRO A . n A 1 79 HIS 79 86 86 HIS HIS A . n A 1 80 GLN 80 87 87 GLN GLN A . n A 1 81 GLY 81 88 88 GLY GLY A . n A 1 82 GLU 82 89 89 GLU GLU A . n A 1 83 HIS 83 90 90 HIS HIS A . n A 1 84 ILE 84 91 91 ILE ILE A . n A 1 85 GLY 85 92 92 GLY GLY A . n A 1 86 GLU 86 93 93 GLU GLU A . n A 1 87 MET 87 94 94 MET MET A . n A 1 88 SER 88 95 95 SER SER A . n A 1 89 PHE 89 96 96 PHE PHE A . n A 1 90 LEU 90 97 97 LEU LEU A . n A 1 91 GLN 91 98 98 GLN GLN A . n A 1 92 HIS 92 99 99 HIS HIS A . n A 1 93 ASN 93 100 100 ASN ASN A . n A 1 94 LYS 94 101 101 LYS LYS A . n A 1 95 CYS 95 102 102 CYS CYS A . n A 1 96 GLU 96 103 103 GLU GLU A . n A 1 97 CYS 97 104 104 CYS CYS A . n A 1 98 ARG 98 105 105 ARG ARG A . n A 1 99 PRO 99 106 106 PRO PRO A . n A 1 100 LYS 100 107 107 LYS LYS A . n A 1 101 ALA 101 108 108 ALA ALA A . n A 1 102 ASP 102 109 ? ? ? A . n B 2 1 GLY 1 8 ? ? ? B . n B 2 2 GLN 2 9 ? ? ? B . n B 2 3 ASN 3 10 ? ? ? B . n B 2 4 HIS 4 11 ? ? ? B . n B 2 5 HIS 5 12 ? ? ? B . n B 2 6 GLU 6 13 13 GLU GLU B . n B 2 7 VAL 7 14 14 VAL VAL B . n B 2 8 VAL 8 15 15 VAL VAL B . n B 2 9 LYS 9 16 16 LYS LYS B . n B 2 10 PHE 10 17 17 PHE PHE B . n B 2 11 MET 11 18 18 MET MET B . n B 2 12 ASP 12 19 19 ASP ASP B . n B 2 13 VAL 13 20 20 VAL VAL B . n B 2 14 TYR 14 21 21 TYR TYR B . n B 2 15 GLN 15 22 22 GLN GLN B . n B 2 16 ARG 16 23 23 ARG ARG B . n B 2 17 SER 17 24 24 SER SER B . n B 2 18 TYR 18 25 25 TYR TYR B . n B 2 19 CYS 19 26 26 CYS CYS B . n B 2 20 HIS 20 27 27 HIS HIS B . n B 2 21 PRO 21 28 28 PRO PRO B . n B 2 22 ILE 22 29 29 ILE ILE B . n B 2 23 GLU 23 30 30 GLU GLU B . n B 2 24 THR 24 31 31 THR THR B . n B 2 25 LEU 25 32 32 LEU LEU B . n B 2 26 VAL 26 33 33 VAL VAL B . n B 2 27 ASP 27 34 34 ASP ASP B . n B 2 28 ILE 28 35 35 ILE ILE B . n B 2 29 PHE 29 36 36 PHE PHE B . n B 2 30 GLN 30 37 37 GLN GLN B . n B 2 31 GLU 31 38 38 GLU GLU B . n B 2 32 TYR 32 39 39 TYR TYR B . n B 2 33 PRO 33 40 40 PRO PRO B . n B 2 34 ASP 34 41 41 ASP ASP B . n B 2 35 GLU 35 42 42 GLU GLU B . n B 2 36 ILE 36 43 43 ILE ILE B . n B 2 37 GLU 37 44 44 GLU GLU B . n B 2 38 TYR 38 45 45 TYR TYR B . n B 2 39 ILE 39 46 46 ILE ILE B . n B 2 40 PHE 40 47 47 PHE PHE B . n B 2 41 LYS 41 48 48 LYS LYS B . n B 2 42 PRO 42 49 49 PRO PRO B . n B 2 43 SER 43 50 50 SER SER B . n B 2 44 CYS 44 51 51 CYS CYS B . n B 2 45 VAL 45 52 52 VAL VAL B . n B 2 46 PRO 46 53 53 PRO PRO B . n B 2 47 LEU 47 54 54 LEU LEU B . n B 2 48 MET 48 55 55 MET MET B . n B 2 49 ARG 49 56 56 ARG ARG B . n B 2 50 CYS 50 57 57 CYS CYS B . n B 2 51 GLY 51 58 58 GLY GLY B . n B 2 52 GLY 52 59 59 GLY GLY B . n B 2 53 CYS 53 60 60 CYS CYS B . n B 2 54 CYS 54 61 61 CYS CYS B . n B 2 55 ASN 55 62 62 ASN ASN B . n B 2 56 ASP 56 63 63 ASP ASP B . n B 2 57 GLU 57 64 64 GLU GLU B . n B 2 58 GLY 58 65 65 GLY GLY B . n B 2 59 LEU 59 66 66 LEU LEU B . n B 2 60 GLU 60 67 67 GLU GLU B . n B 2 61 CYS 61 68 68 CYS CYS B . n B 2 62 VAL 62 69 69 VAL VAL B . n B 2 63 PRO 63 70 70 PRO PRO B . n B 2 64 THR 64 71 71 THR THR B . n B 2 65 GLU 65 72 72 GLU GLU B . n B 2 66 GLU 66 73 73 GLU GLU B . n B 2 67 SER 67 74 74 SER SER B . n B 2 68 ASN 68 75 75 ASN ASN B . n B 2 69 ILE 69 76 76 ILE ILE B . n B 2 70 THR 70 77 77 THR THR B . n B 2 71 MET 71 78 78 MET MET B . n B 2 72 GLN 72 79 79 GLN GLN B . n B 2 73 ILE 73 80 80 ILE ILE B . n B 2 74 MET 74 81 81 MET MET B . n B 2 75 ARG 75 82 82 ARG ARG B . n B 2 76 ILE 76 83 83 ILE ILE B . n B 2 77 LYS 77 84 84 LYS LYS B . n B 2 78 PRO 78 85 85 PRO PRO B . n B 2 79 HIS 79 86 86 HIS HIS B . n B 2 80 GLN 80 87 87 GLN GLN B . n B 2 81 GLY 81 88 88 GLY GLY B . n B 2 82 GLN 82 89 89 GLN GLN B . n B 2 83 HIS 83 90 90 HIS HIS B . n B 2 84 ILE 84 91 91 ILE ILE B . n B 2 85 GLY 85 92 92 GLY GLY B . n B 2 86 GLU 86 93 93 GLU GLU B . n B 2 87 MET 87 94 94 MET MET B . n B 2 88 SER 88 95 95 SER SER B . n B 2 89 PHE 89 96 96 PHE PHE B . n B 2 90 LEU 90 97 97 LEU LEU B . n B 2 91 GLN 91 98 98 GLN GLN B . n B 2 92 HIS 92 99 99 HIS HIS B . n B 2 93 ASN 93 100 100 ASN ASN B . n B 2 94 LYS 94 101 101 LYS LYS B . n B 2 95 CYS 95 102 102 CYS CYS B . n B 2 96 GLU 96 103 103 GLU GLU B . n B 2 97 CYS 97 104 104 CYS CYS B . n B 2 98 ARG 98 105 105 ARG ARG B . n B 2 99 PRO 99 106 106 PRO PRO B . n B 2 100 LYS 100 107 107 LYS LYS B . n B 2 101 LYS 101 108 ? ? ? B . n B 2 102 ASP 102 109 ? ? ? B . n C 3 1 ASN 1 4 4 ASN ASN C . n C 3 2 CYS 2 5 5 CYS CYS C . n C 3 3 ASP 3 6 6 ASP ASP C . n C 3 4 ILE 4 7 7 ILE ILE C . n C 3 5 HIS 5 8 8 HIS HIS C . n C 3 6 VAL 6 9 9 VAL VAL C . n C 3 7 NLE 7 10 10 NLE NLE C . n C 3 8 HT7 8 11 11 HT7 B3W C . n C 3 9 GLU 9 12 12 GLU GLU C . n C 3 10 TRP 10 13 13 TRP TRP C . n C 3 11 B3E 11 14 14 B3E B3E C . n C 3 12 CYS 12 15 15 CYS CYS C . n C 3 13 PHE 13 16 16 PHE PHE C . n C 3 14 XPC 14 17 17 XPC APC C . n C 3 15 ARG 15 18 18 ARG ARG C . n D 3 1 ASN 1 4 ? ? ? D . n D 3 2 CYS 2 5 5 CYS CYS D . n D 3 3 ASP 3 6 6 ASP ASP D . n D 3 4 ILE 4 7 7 ILE ILE D . n D 3 5 HIS 5 8 8 HIS HIS D . n D 3 6 VAL 6 9 9 VAL VAL D . n D 3 7 NLE 7 10 10 NLE NLE D . n D 3 8 HT7 8 11 11 HT7 B3W D . n D 3 9 GLU 9 12 12 GLU GLU D . n D 3 10 TRP 10 13 13 TRP TRP D . n D 3 11 B3E 11 14 14 B3E B3E D . n D 3 12 CYS 12 15 15 CYS CYS D . n D 3 13 PHE 13 16 16 PHE PHE D . n D 3 14 XPC 14 17 17 XPC APC D . n D 3 15 ARG 15 18 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 HOH 1 201 4 HOH HOH A . F 4 HOH 1 101 3 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-04-24 2 'Structure model' 2 0 2019-08-14 3 'Structure model' 2 1 2020-01-01 4 'Structure model' 2 2 2020-06-10 5 'Structure model' 3 0 2021-02-24 6 'Structure model' 4 0 2023-02-22 7 'Structure model' 4 1 2023-10-25 8 'Structure model' 5 0 2023-11-15 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' author 'Coordinate replacement' 'Ligand geometry' 'Amended torsion angle of APC ligand in HH4 peptide.' # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Polymer sequence' 4 3 'Structure model' 'Author supporting evidence' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Structure summary' 7 5 'Structure model' Advisory 8 5 'Structure model' 'Atomic model' 9 5 'Structure model' 'Author supporting evidence' 10 5 'Structure model' 'Data collection' 11 5 'Structure model' 'Database references' 12 5 'Structure model' 'Derived calculations' 13 5 'Structure model' 'Non-polymer description' 14 5 'Structure model' 'Polymer sequence' 15 5 'Structure model' 'Refinement description' 16 5 'Structure model' 'Source and taxonomy' 17 5 'Structure model' 'Structure summary' 18 6 'Structure model' Advisory 19 6 'Structure model' 'Atomic model' 20 6 'Structure model' 'Data collection' 21 6 'Structure model' 'Database references' 22 6 'Structure model' 'Derived calculations' 23 6 'Structure model' 'Source and taxonomy' 24 6 'Structure model' 'Structure summary' 25 7 'Structure model' 'Data collection' 26 7 'Structure model' 'Refinement description' 27 8 'Structure model' 'Atomic model' 28 8 'Structure model' 'Data collection' 29 8 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' entity_poly 4 3 'Structure model' pdbx_audit_support 5 4 'Structure model' audit_author 6 4 'Structure model' citation_author 7 5 'Structure model' atom_site 8 5 'Structure model' atom_site_anisotrop 9 5 'Structure model' chem_comp 10 5 'Structure model' diffrn 11 5 'Structure model' entity 12 5 'Structure model' entity_name_com 13 5 'Structure model' entity_poly 14 5 'Structure model' entity_poly_seq 15 5 'Structure model' entity_src_gen 16 5 'Structure model' pdbx_entity_instance_feature 17 5 'Structure model' pdbx_entity_nonpoly 18 5 'Structure model' pdbx_entity_src_syn 19 5 'Structure model' pdbx_entry_details 20 5 'Structure model' pdbx_nonpoly_scheme 21 5 'Structure model' pdbx_poly_seq_scheme 22 5 'Structure model' pdbx_refine_tls 23 5 'Structure model' pdbx_struct_assembly_gen 24 5 'Structure model' pdbx_struct_sheet_hbond 25 5 'Structure model' pdbx_unobs_or_zero_occ_atoms 26 5 'Structure model' pdbx_unobs_or_zero_occ_residues 27 5 'Structure model' pdbx_validate_peptide_omega 28 5 'Structure model' pdbx_validate_rmsd_angle 29 5 'Structure model' pdbx_validate_torsion 30 5 'Structure model' refine 31 5 'Structure model' refine_hist 32 5 'Structure model' refine_ls_restr 33 5 'Structure model' refine_ls_restr_ncs 34 5 'Structure model' refine_ls_shell 35 5 'Structure model' software 36 5 'Structure model' struct_asym 37 5 'Structure model' struct_conf 38 5 'Structure model' struct_conn 39 5 'Structure model' struct_mon_prot_cis 40 5 'Structure model' struct_ncs_dom 41 5 'Structure model' struct_ncs_dom_lim 42 5 'Structure model' struct_ncs_ens 43 5 'Structure model' struct_ref 44 5 'Structure model' struct_ref_seq 45 5 'Structure model' struct_ref_seq_dif 46 5 'Structure model' struct_sheet 47 5 'Structure model' struct_sheet_order 48 5 'Structure model' struct_sheet_range 49 6 'Structure model' atom_site 50 6 'Structure model' database_2 51 6 'Structure model' entity 52 6 'Structure model' entity_src_gen 53 6 'Structure model' pdbx_entity_nonpoly 54 6 'Structure model' pdbx_nonpoly_scheme 55 6 'Structure model' pdbx_poly_seq_scheme 56 6 'Structure model' pdbx_struct_assembly_gen 57 6 'Structure model' pdbx_unobs_or_zero_occ_atoms 58 6 'Structure model' pdbx_unobs_or_zero_occ_residues 59 6 'Structure model' pdbx_validate_peptide_omega 60 6 'Structure model' struct_asym 61 6 'Structure model' struct_conf 62 6 'Structure model' struct_conn 63 7 'Structure model' chem_comp_atom 64 7 'Structure model' chem_comp_bond 65 7 'Structure model' pdbx_initial_refinement_model 66 7 'Structure model' struct_ncs_dom_lim 67 8 'Structure model' atom_site 68 8 'Structure model' chem_comp_atom 69 8 'Structure model' chem_comp_bond 70 8 'Structure model' pdbx_validate_main_chain_plane 71 8 'Structure model' pdbx_validate_peptide_omega 72 8 'Structure model' pdbx_validate_torsion 73 8 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' 13 2 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can' 14 3 'Structure model' '_pdbx_audit_support.funding_organization' 15 4 'Structure model' '_audit_author.identifier_ORCID' 16 4 'Structure model' '_citation_author.identifier_ORCID' 17 5 'Structure model' '_chem_comp.formula' 18 5 'Structure model' '_chem_comp.formula_weight' 19 5 'Structure model' '_chem_comp.id' 20 5 'Structure model' '_chem_comp.mon_nstd_flag' 21 5 'Structure model' '_chem_comp.name' 22 5 'Structure model' '_chem_comp.pdbx_synonyms' 23 5 'Structure model' '_chem_comp.type' 24 5 'Structure model' '_diffrn.pdbx_serial_crystal_experiment' 25 5 'Structure model' '_pdbx_entity_src_syn.entity_id' 26 5 'Structure model' '_pdbx_entity_src_syn.pdbx_end_seq_num' 27 5 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 28 5 'Structure model' '_refine.B_iso_max' 29 5 'Structure model' '_refine.B_iso_mean' 30 5 'Structure model' '_refine.B_iso_min' 31 5 'Structure model' '_refine.aniso_B[1][1]' 32 5 'Structure model' '_refine.aniso_B[1][2]' 33 5 'Structure model' '_refine.aniso_B[1][3]' 34 5 'Structure model' '_refine.aniso_B[2][2]' 35 5 'Structure model' '_refine.aniso_B[3][3]' 36 5 'Structure model' '_refine.correlation_coeff_Fo_to_Fc' 37 5 'Structure model' '_refine.correlation_coeff_Fo_to_Fc_free' 38 5 'Structure model' '_refine.details' 39 5 'Structure model' '_refine.ls_R_factor_R_free' 40 5 'Structure model' '_refine.ls_R_factor_R_work' 41 5 'Structure model' '_refine.ls_R_factor_obs' 42 5 'Structure model' '_refine.ls_d_res_low' 43 5 'Structure model' '_refine.ls_number_reflns_obs' 44 5 'Structure model' '_refine.ls_percent_reflns_obs' 45 5 'Structure model' '_refine.overall_SU_B' 46 5 'Structure model' '_refine.overall_SU_ML' 47 5 'Structure model' '_refine.pdbx_ls_sigma_F' 48 5 'Structure model' '_refine.pdbx_overall_ESU_R_Free' 49 5 'Structure model' '_refine.pdbx_stereochemistry_target_values' 50 5 'Structure model' '_refine.solvent_model_details' 51 5 'Structure model' '_refine_hist.cycle_id' 52 5 'Structure model' '_refine_hist.d_res_low' 53 5 'Structure model' '_refine_hist.number_atoms_total' 54 5 'Structure model' '_refine_hist.pdbx_B_iso_mean_ligand' 55 5 'Structure model' '_refine_hist.pdbx_B_iso_mean_solvent' 56 5 'Structure model' '_refine_hist.pdbx_number_atoms_ligand' 57 5 'Structure model' '_refine_hist.pdbx_number_atoms_protein' 58 5 'Structure model' '_refine_hist.pdbx_number_residues_total' 59 5 'Structure model' '_refine_ls_shell.R_factor_R_free' 60 5 'Structure model' '_refine_ls_shell.R_factor_R_free_error' 61 5 'Structure model' '_refine_ls_shell.R_factor_R_work' 62 5 'Structure model' '_refine_ls_shell.number_reflns_all' 63 5 'Structure model' '_software.version' 64 5 'Structure model' '_struct_conn.pdbx_dist_value' 65 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 66 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 67 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 68 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 69 5 'Structure model' '_struct_mon_prot_cis.label_seq_id' 70 5 'Structure model' '_struct_mon_prot_cis.pdbx_label_seq_id_2' 71 5 'Structure model' '_struct_mon_prot_cis.pdbx_omega_angle' 72 5 'Structure model' '_struct_ref_seq.db_align_beg' 73 5 'Structure model' '_struct_ref_seq.pdbx_auth_seq_align_beg' 74 5 'Structure model' '_struct_ref_seq.ref_id' 75 5 'Structure model' '_struct_ref_seq.seq_align_beg' 76 5 'Structure model' '_struct_ref_seq.seq_align_end' 77 6 'Structure model' '_atom_site.auth_seq_id' 78 6 'Structure model' '_atom_site.label_asym_id' 79 6 'Structure model' '_atom_site.label_entity_id' 80 6 'Structure model' '_atom_site.label_seq_id' 81 6 'Structure model' '_database_2.pdbx_DOI' 82 6 'Structure model' '_database_2.pdbx_database_accession' 83 6 'Structure model' '_entity_src_gen.gene_src_common_name' 84 6 'Structure model' '_pdbx_poly_seq_scheme.auth_mon_id' 85 6 'Structure model' '_pdbx_poly_seq_scheme.auth_seq_num' 86 6 'Structure model' '_pdbx_poly_seq_scheme.pdb_mon_id' 87 6 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 88 6 'Structure model' '_struct_conf.end_auth_comp_id' 89 6 'Structure model' '_struct_conf.end_auth_seq_id' 90 6 'Structure model' '_struct_conf.end_label_comp_id' 91 6 'Structure model' '_struct_conf.end_label_seq_id' 92 6 'Structure model' '_struct_conf.pdbx_PDB_helix_class' 93 6 'Structure model' '_struct_conf.pdbx_PDB_helix_length' 94 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 95 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 96 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 97 7 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 98 7 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 99 7 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 100 7 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 101 7 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 102 7 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 103 7 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 104 7 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' 105 8 'Structure model' '_atom_site.auth_atom_id' 106 8 'Structure model' '_atom_site.label_atom_id' 107 8 'Structure model' '_chem_comp_atom.atom_id' 108 8 'Structure model' '_chem_comp_bond.atom_id_1' 109 8 'Structure model' '_chem_comp_bond.atom_id_2' 110 8 'Structure model' '_pdbx_validate_peptide_omega.auth_comp_id_1' 111 8 'Structure model' '_pdbx_validate_peptide_omega.auth_comp_id_2' 112 8 'Structure model' '_pdbx_validate_peptide_omega.auth_seq_id_1' 113 8 'Structure model' '_pdbx_validate_peptide_omega.auth_seq_id_2' 114 8 'Structure model' '_pdbx_validate_peptide_omega.omega' 115 8 'Structure model' '_pdbx_validate_torsion.phi' 116 8 'Structure model' '_pdbx_validate_torsion.psi' 117 8 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 32.3792 -35.9394 6.6183 0.0779 ? 0.0059 ? -0.0262 ? 0.1146 ? 0.0450 ? 0.0334 ? 2.7675 ? 2.0894 ? -0.0203 ? 7.0701 ? 1.2976 ? 2.0858 ? 0.4077 ? 0.2728 ? -0.0198 ? 0.6088 ? -0.2577 ? -0.3749 ? 0.0721 ? -0.0608 ? -0.1500 ? 2 'X-RAY DIFFRACTION' ? refined 16.9601 -40.2532 3.1370 0.1038 ? -0.0219 ? 0.0850 ? 0.4704 ? -0.1263 ? 0.1883 ? 2.6559 ? -0.1686 ? 0.6699 ? 7.0763 ? 1.8782 ? 1.8710 ? 0.2380 ? 0.1855 ? -0.0420 ? 0.6784 ? -0.6086 ? 1.0864 ? 0.1845 ? -0.6227 ? 0.3706 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 14 ? ? ? A 107 ? ? ? 2 'X-RAY DIFFRACTION' 2 ? ? B 13 ? ? ? B 107 ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0267 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_entry_details.entry_id 6D3O _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 C _pdbx_validate_rmsd_angle.auth_comp_id_1 PHE _pdbx_validate_rmsd_angle.auth_seq_id_1 16 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 C _pdbx_validate_rmsd_angle.auth_comp_id_2 XPC _pdbx_validate_rmsd_angle.auth_seq_id_2 17 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CA _pdbx_validate_rmsd_angle.auth_asym_id_3 C _pdbx_validate_rmsd_angle.auth_comp_id_3 XPC _pdbx_validate_rmsd_angle.auth_seq_id_3 17 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 137.11 _pdbx_validate_rmsd_angle.angle_target_value 121.70 _pdbx_validate_rmsd_angle.angle_deviation 15.41 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.50 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 26 ? ? -31.41 108.00 2 1 CYS B 26 ? ? -30.53 108.16 3 1 HT7 C 11 ? ? 90.52 -24.47 4 1 B3E C 14 ? ? -55.62 8.35 5 1 HT7 D 11 ? ? 106.15 -26.23 6 1 B3E D 14 ? ? -50.34 -4.71 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 NLE C 10 ? ? HT7 C 11 ? ? 135.36 2 1 B3E C 14 ? ? CYS C 15 ? ? 145.91 3 1 PHE C 16 ? ? XPC C 17 ? ? 140.85 4 1 NLE D 10 ? ? HT7 D 11 ? ? 135.80 5 1 B3E D 14 ? ? CYS D 15 ? ? 144.21 6 1 PHE D 16 ? ? XPC D 17 ? ? 140.73 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 B3E C 14 ? ? -15.52 2 1 B3E D 14 ? ? -17.06 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 42 ? OE1 ? A GLU 35 OE1 2 1 Y 1 A GLU 42 ? OE2 ? A GLU 35 OE2 3 1 Y 1 A GLU 44 ? CG ? A GLU 37 CG 4 1 Y 1 A GLU 44 ? CD ? A GLU 37 CD 5 1 Y 1 A GLU 44 ? OE1 ? A GLU 37 OE1 6 1 Y 1 A GLU 44 ? OE2 ? A GLU 37 OE2 7 1 Y 1 A ASP 63 ? CG ? A ASP 56 CG 8 1 Y 1 A ASP 63 ? OD1 ? A ASP 56 OD1 9 1 Y 1 A ASP 63 ? OD2 ? A ASP 56 OD2 10 1 Y 1 A GLU 64 ? CG ? A GLU 57 CG 11 1 Y 1 A GLU 64 ? CD ? A GLU 57 CD 12 1 Y 1 A GLU 64 ? OE1 ? A GLU 57 OE1 13 1 Y 1 A GLU 64 ? OE2 ? A GLU 57 OE2 14 1 Y 1 A GLU 72 ? CG ? A GLU 65 CG 15 1 Y 1 A GLU 72 ? CD ? A GLU 65 CD 16 1 Y 1 A GLU 72 ? OE1 ? A GLU 65 OE1 17 1 Y 1 A GLU 72 ? OE2 ? A GLU 65 OE2 18 1 Y 1 A GLU 73 ? OE1 ? A GLU 66 OE1 19 1 Y 1 A GLU 73 ? OE2 ? A GLU 66 OE2 20 1 Y 1 A ARG 82 ? NE ? A ARG 75 NE 21 1 Y 1 A ARG 82 ? CZ ? A ARG 75 CZ 22 1 Y 1 A ARG 82 ? NH1 ? A ARG 75 NH1 23 1 Y 1 A ARG 82 ? NH2 ? A ARG 75 NH2 24 1 Y 1 A LYS 84 ? CE ? A LYS 77 CE 25 1 Y 1 A LYS 84 ? NZ ? A LYS 77 NZ 26 1 Y 1 B LYS 16 ? CG ? B LYS 9 CG 27 1 Y 1 B LYS 16 ? CD ? B LYS 9 CD 28 1 Y 1 B LYS 16 ? CE ? B LYS 9 CE 29 1 Y 1 B LYS 16 ? NZ ? B LYS 9 NZ 30 1 Y 1 B ASP 19 ? CG ? B ASP 12 CG 31 1 Y 1 B ASP 19 ? OD1 ? B ASP 12 OD1 32 1 Y 1 B ASP 19 ? OD2 ? B ASP 12 OD2 33 1 Y 1 B GLU 30 ? CD ? B GLU 23 CD 34 1 Y 1 B GLU 30 ? OE1 ? B GLU 23 OE1 35 1 Y 1 B GLU 30 ? OE2 ? B GLU 23 OE2 36 1 Y 1 B PHE 36 ? CG ? B PHE 29 CG 37 1 Y 1 B PHE 36 ? CD1 ? B PHE 29 CD1 38 1 Y 1 B PHE 36 ? CD2 ? B PHE 29 CD2 39 1 Y 1 B PHE 36 ? CE1 ? B PHE 29 CE1 40 1 Y 1 B PHE 36 ? CE2 ? B PHE 29 CE2 41 1 Y 1 B PHE 36 ? CZ ? B PHE 29 CZ 42 1 Y 1 B ASP 41 ? CG ? B ASP 34 CG 43 1 Y 1 B ASP 41 ? OD1 ? B ASP 34 OD1 44 1 Y 1 B ASP 41 ? OD2 ? B ASP 34 OD2 45 1 Y 1 B TYR 45 ? CG ? B TYR 38 CG 46 1 Y 1 B TYR 45 ? CD1 ? B TYR 38 CD1 47 1 Y 1 B TYR 45 ? CD2 ? B TYR 38 CD2 48 1 Y 1 B TYR 45 ? CE1 ? B TYR 38 CE1 49 1 Y 1 B TYR 45 ? CE2 ? B TYR 38 CE2 50 1 Y 1 B TYR 45 ? CZ ? B TYR 38 CZ 51 1 Y 1 B TYR 45 ? OH ? B TYR 38 OH 52 1 Y 1 B GLU 64 ? CG ? B GLU 57 CG 53 1 Y 1 B GLU 64 ? CD ? B GLU 57 CD 54 1 Y 1 B GLU 64 ? OE1 ? B GLU 57 OE1 55 1 Y 1 B GLU 64 ? OE2 ? B GLU 57 OE2 56 1 Y 1 B GLU 72 ? CG ? B GLU 65 CG 57 1 Y 1 B GLU 72 ? CD ? B GLU 65 CD 58 1 Y 1 B GLU 72 ? OE1 ? B GLU 65 OE1 59 1 Y 1 B GLU 72 ? OE2 ? B GLU 65 OE2 60 1 Y 1 B LYS 84 ? CG ? B LYS 77 CG 61 1 Y 1 B LYS 84 ? CD ? B LYS 77 CD 62 1 Y 1 B LYS 84 ? CE ? B LYS 77 CE 63 1 Y 1 B LYS 84 ? NZ ? B LYS 77 NZ 64 1 Y 1 B HIS 86 ? CG ? B HIS 79 CG 65 1 Y 1 B HIS 86 ? ND1 ? B HIS 79 ND1 66 1 Y 1 B HIS 86 ? CD2 ? B HIS 79 CD2 67 1 Y 1 B HIS 86 ? CE1 ? B HIS 79 CE1 68 1 Y 1 B HIS 86 ? NE2 ? B HIS 79 NE2 69 1 Y 1 B LYS 101 ? CG ? B LYS 94 CG 70 1 Y 1 B LYS 101 ? CD ? B LYS 94 CD 71 1 Y 1 B LYS 101 ? CE ? B LYS 94 CE 72 1 Y 1 B LYS 101 ? NZ ? B LYS 94 NZ 73 1 Y 1 B GLU 103 ? CG ? B GLU 96 CG 74 1 Y 1 B GLU 103 ? CD ? B GLU 96 CD 75 1 Y 1 B GLU 103 ? OE1 ? B GLU 96 OE1 76 1 Y 1 B GLU 103 ? OE2 ? B GLU 96 OE2 77 1 Y 1 C ARG 18 ? CG ? C ARG 15 CG 78 1 Y 1 C ARG 18 ? CD ? C ARG 15 CD 79 1 Y 1 C ARG 18 ? NE ? C ARG 15 NE 80 1 Y 1 C ARG 18 ? CZ ? C ARG 15 CZ 81 1 Y 1 C ARG 18 ? NH1 ? C ARG 15 NH1 82 1 Y 1 C ARG 18 ? NH2 ? C ARG 15 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 8 ? A GLY 1 2 1 Y 1 A GLN 9 ? A GLN 2 3 1 Y 1 A ASN 10 ? A ASN 3 4 1 Y 1 A HIS 11 ? A HIS 4 5 1 Y 1 A HIS 12 ? A HIS 5 6 1 Y 1 A ASP 109 ? A ASP 102 7 1 Y 1 B GLY 8 ? B GLY 1 8 1 Y 1 B GLN 9 ? B GLN 2 9 1 Y 1 B ASN 10 ? B ASN 3 10 1 Y 1 B HIS 11 ? B HIS 4 11 1 Y 1 B HIS 12 ? B HIS 5 12 1 Y 1 B LYS 108 ? B LYS 101 13 1 Y 1 B ASP 109 ? B ASP 102 14 1 Y 1 D ASN 4 ? D ASN 1 15 1 Y 1 D ARG 18 ? D ARG 15 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 B3E N N N N 74 B3E CA C N S 75 B3E CG C N N 76 B3E CD C N N 77 B3E CE C N N 78 B3E OF2 O N N 79 B3E OF1 O N N 80 B3E CB C N N 81 B3E C C N N 82 B3E O O N N 83 B3E OXT O N N 84 B3E H H N N 85 B3E H2 H N N 86 B3E HA H N N 87 B3E HG2 H N N 88 B3E HG3 H N N 89 B3E HD2 H N N 90 B3E HD3 H N N 91 B3E HOF1 H N N 92 B3E HB1 H N N 93 B3E HB2 H N N 94 B3E HXT H N N 95 CYS N N N N 96 CYS CA C N R 97 CYS C C N N 98 CYS O O N N 99 CYS CB C N N 100 CYS SG S N N 101 CYS OXT O N N 102 CYS H H N N 103 CYS H2 H N N 104 CYS HA H N N 105 CYS HB2 H N N 106 CYS HB3 H N N 107 CYS HG H N N 108 CYS HXT H N N 109 GLN N N N N 110 GLN CA C N S 111 GLN C C N N 112 GLN O O N N 113 GLN CB C N N 114 GLN CG C N N 115 GLN CD C N N 116 GLN OE1 O N N 117 GLN NE2 N N N 118 GLN OXT O N N 119 GLN H H N N 120 GLN H2 H N N 121 GLN HA H N N 122 GLN HB2 H N N 123 GLN HB3 H N N 124 GLN HG2 H N N 125 GLN HG3 H N N 126 GLN HE21 H N N 127 GLN HE22 H N N 128 GLN HXT H N N 129 GLU N N N N 130 GLU CA C N S 131 GLU C C N N 132 GLU O O N N 133 GLU CB C N N 134 GLU CG C N N 135 GLU CD C N N 136 GLU OE1 O N N 137 GLU OE2 O N N 138 GLU OXT O N N 139 GLU H H N N 140 GLU H2 H N N 141 GLU HA H N N 142 GLU HB2 H N N 143 GLU HB3 H N N 144 GLU HG2 H N N 145 GLU HG3 H N N 146 GLU HE2 H N N 147 GLU HXT H N N 148 GLY N N N N 149 GLY CA C N N 150 GLY C C N N 151 GLY O O N N 152 GLY OXT O N N 153 GLY H H N N 154 GLY H2 H N N 155 GLY HA2 H N N 156 GLY HA3 H N N 157 GLY HXT H N N 158 HIS N N N N 159 HIS CA C N S 160 HIS C C N N 161 HIS O O N N 162 HIS CB C N N 163 HIS CG C Y N 164 HIS ND1 N Y N 165 HIS CD2 C Y N 166 HIS CE1 C Y N 167 HIS NE2 N Y N 168 HIS OXT O N N 169 HIS H H N N 170 HIS H2 H N N 171 HIS HA H N N 172 HIS HB2 H N N 173 HIS HB3 H N N 174 HIS HD1 H N N 175 HIS HD2 H N N 176 HIS HE1 H N N 177 HIS HE2 H N N 178 HIS HXT H N N 179 HOH O O N N 180 HOH H1 H N N 181 HOH H2 H N N 182 HT7 N N N N 183 HT7 CB C N S 184 HT7 CG C N N 185 HT7 CD C Y N 186 HT7 CE2 C Y N 187 HT7 CZ3 C Y N 188 HT7 CH3 C Y N 189 HT7 CT2 C Y N 190 HT7 CH2 C Y N 191 HT7 CZ2 C Y N 192 HT7 NZ1 N Y N 193 HT7 CE1 C Y N 194 HT7 CA C N N 195 HT7 C C N N 196 HT7 O O N N 197 HT7 OXT O N N 198 HT7 H H N N 199 HT7 H2 H N N 200 HT7 HB H N N 201 HT7 HA1 H N N 202 HT7 HB2 H N N 203 HT7 HA H N N 204 HT7 HC2 H N N 205 HT7 HE1 H N N 206 HT7 HZ3 H N N 207 HT7 HH3 H N N 208 HT7 HT2 H N N 209 HT7 HH2 H N N 210 HT7 HZ1 H N N 211 HT7 HXT H N N 212 ILE N N N N 213 ILE CA C N S 214 ILE C C N N 215 ILE O O N N 216 ILE CB C N S 217 ILE CG1 C N N 218 ILE CG2 C N N 219 ILE CD1 C N N 220 ILE OXT O N N 221 ILE H H N N 222 ILE H2 H N N 223 ILE HA H N N 224 ILE HB H N N 225 ILE HG12 H N N 226 ILE HG13 H N N 227 ILE HG21 H N N 228 ILE HG22 H N N 229 ILE HG23 H N N 230 ILE HD11 H N N 231 ILE HD12 H N N 232 ILE HD13 H N N 233 ILE HXT H N N 234 LEU N N N N 235 LEU CA C N S 236 LEU C C N N 237 LEU O O N N 238 LEU CB C N N 239 LEU CG C N N 240 LEU CD1 C N N 241 LEU CD2 C N N 242 LEU OXT O N N 243 LEU H H N N 244 LEU H2 H N N 245 LEU HA H N N 246 LEU HB2 H N N 247 LEU HB3 H N N 248 LEU HG H N N 249 LEU HD11 H N N 250 LEU HD12 H N N 251 LEU HD13 H N N 252 LEU HD21 H N N 253 LEU HD22 H N N 254 LEU HD23 H N N 255 LEU HXT H N N 256 LYS N N N N 257 LYS CA C N S 258 LYS C C N N 259 LYS O O N N 260 LYS CB C N N 261 LYS CG C N N 262 LYS CD C N N 263 LYS CE C N N 264 LYS NZ N N N 265 LYS OXT O N N 266 LYS H H N N 267 LYS H2 H N N 268 LYS HA H N N 269 LYS HB2 H N N 270 LYS HB3 H N N 271 LYS HG2 H N N 272 LYS HG3 H N N 273 LYS HD2 H N N 274 LYS HD3 H N N 275 LYS HE2 H N N 276 LYS HE3 H N N 277 LYS HZ1 H N N 278 LYS HZ2 H N N 279 LYS HZ3 H N N 280 LYS HXT H N N 281 MET N N N N 282 MET CA C N S 283 MET C C N N 284 MET O O N N 285 MET CB C N N 286 MET CG C N N 287 MET SD S N N 288 MET CE C N N 289 MET OXT O N N 290 MET H H N N 291 MET H2 H N N 292 MET HA H N N 293 MET HB2 H N N 294 MET HB3 H N N 295 MET HG2 H N N 296 MET HG3 H N N 297 MET HE1 H N N 298 MET HE2 H N N 299 MET HE3 H N N 300 MET HXT H N N 301 NLE N N N N 302 NLE CA C N S 303 NLE C C N N 304 NLE O O N N 305 NLE OXT O N N 306 NLE CB C N N 307 NLE CG C N N 308 NLE CD C N N 309 NLE CE C N N 310 NLE H H N N 311 NLE H2 H N N 312 NLE HA H N N 313 NLE HXT H N N 314 NLE HB2 H N N 315 NLE HB3 H N N 316 NLE HG2 H N N 317 NLE HG3 H N N 318 NLE HD2 H N N 319 NLE HD3 H N N 320 NLE HE1 H N N 321 NLE HE2 H N N 322 NLE HE3 H N N 323 PHE N N N N 324 PHE CA C N S 325 PHE C C N N 326 PHE O O N N 327 PHE CB C N N 328 PHE CG C Y N 329 PHE CD1 C Y N 330 PHE CD2 C Y N 331 PHE CE1 C Y N 332 PHE CE2 C Y N 333 PHE CZ C Y N 334 PHE OXT O N N 335 PHE H H N N 336 PHE H2 H N N 337 PHE HA H N N 338 PHE HB2 H N N 339 PHE HB3 H N N 340 PHE HD1 H N N 341 PHE HD2 H N N 342 PHE HE1 H N N 343 PHE HE2 H N N 344 PHE HZ H N N 345 PHE HXT H N N 346 PRO N N N N 347 PRO CA C N S 348 PRO C C N N 349 PRO O O N N 350 PRO CB C N N 351 PRO CG C N N 352 PRO CD C N N 353 PRO OXT O N N 354 PRO H H N N 355 PRO HA H N N 356 PRO HB2 H N N 357 PRO HB3 H N N 358 PRO HG2 H N N 359 PRO HG3 H N N 360 PRO HD2 H N N 361 PRO HD3 H N N 362 PRO HXT H N N 363 SER N N N N 364 SER CA C N S 365 SER C C N N 366 SER O O N N 367 SER CB C N N 368 SER OG O N N 369 SER OXT O N N 370 SER H H N N 371 SER H2 H N N 372 SER HA H N N 373 SER HB2 H N N 374 SER HB3 H N N 375 SER HG H N N 376 SER HXT H N N 377 THR N N N N 378 THR CA C N S 379 THR C C N N 380 THR O O N N 381 THR CB C N R 382 THR OG1 O N N 383 THR CG2 C N N 384 THR OXT O N N 385 THR H H N N 386 THR H2 H N N 387 THR HA H N N 388 THR HB H N N 389 THR HG1 H N N 390 THR HG21 H N N 391 THR HG22 H N N 392 THR HG23 H N N 393 THR HXT H N N 394 TRP N N N N 395 TRP CA C N S 396 TRP C C N N 397 TRP O O N N 398 TRP CB C N N 399 TRP CG C Y N 400 TRP CD1 C Y N 401 TRP CD2 C Y N 402 TRP NE1 N Y N 403 TRP CE2 C Y N 404 TRP CE3 C Y N 405 TRP CZ2 C Y N 406 TRP CZ3 C Y N 407 TRP CH2 C Y N 408 TRP OXT O N N 409 TRP H H N N 410 TRP H2 H N N 411 TRP HA H N N 412 TRP HB2 H N N 413 TRP HB3 H N N 414 TRP HD1 H N N 415 TRP HE1 H N N 416 TRP HE3 H N N 417 TRP HZ2 H N N 418 TRP HZ3 H N N 419 TRP HH2 H N N 420 TRP HXT H N N 421 TYR N N N N 422 TYR CA C N S 423 TYR C C N N 424 TYR O O N N 425 TYR CB C N N 426 TYR CG C Y N 427 TYR CD1 C Y N 428 TYR CD2 C Y N 429 TYR CE1 C Y N 430 TYR CE2 C Y N 431 TYR CZ C Y N 432 TYR OH O N N 433 TYR OXT O N N 434 TYR H H N N 435 TYR H2 H N N 436 TYR HA H N N 437 TYR HB2 H N N 438 TYR HB3 H N N 439 TYR HD1 H N N 440 TYR HD2 H N N 441 TYR HE1 H N N 442 TYR HE2 H N N 443 TYR HH H N N 444 TYR HXT H N N 445 VAL N N N N 446 VAL CA C N S 447 VAL C C N N 448 VAL O O N N 449 VAL CB C N N 450 VAL CG1 C N N 451 VAL CG2 C N N 452 VAL OXT O N N 453 VAL H H N N 454 VAL H2 H N N 455 VAL HA H N N 456 VAL HB H N N 457 VAL HG11 H N N 458 VAL HG12 H N N 459 VAL HG13 H N N 460 VAL HG21 H N N 461 VAL HG22 H N N 462 VAL HG23 H N N 463 VAL HXT H N N 464 XPC N N N N 465 XPC CB C N R 466 XPC CG C N N 467 XPC ND N N N 468 XPC CE C N N 469 XPC CA C N S 470 XPC C C N N 471 XPC O O N N 472 XPC H H N N 473 XPC HB H N N 474 XPC HG H N N 475 XPC HGA H N N 476 XPC HND H N N 477 XPC HE H N N 478 XPC HEA H N N 479 XPC HA H N N 480 XPC H2 H N N 481 XPC OXT O N N 482 XPC HXT H N N 483 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 B3E N CA sing N N 70 B3E N H sing N N 71 B3E N H2 sing N N 72 B3E CA CG sing N N 73 B3E CA CB sing N N 74 B3E CA HA sing N N 75 B3E CG CD sing N N 76 B3E CG HG2 sing N N 77 B3E CG HG3 sing N N 78 B3E CD CE sing N N 79 B3E CD HD2 sing N N 80 B3E CD HD3 sing N N 81 B3E CE OF2 doub N N 82 B3E CE OF1 sing N N 83 B3E OF1 HOF1 sing N N 84 B3E CB C sing N N 85 B3E CB HB1 sing N N 86 B3E CB HB2 sing N N 87 B3E C OXT sing N N 88 B3E C O doub N N 89 B3E OXT HXT sing N N 90 CYS N CA sing N N 91 CYS N H sing N N 92 CYS N H2 sing N N 93 CYS CA C sing N N 94 CYS CA CB sing N N 95 CYS CA HA sing N N 96 CYS C O doub N N 97 CYS C OXT sing N N 98 CYS CB SG sing N N 99 CYS CB HB2 sing N N 100 CYS CB HB3 sing N N 101 CYS SG HG sing N N 102 CYS OXT HXT sing N N 103 GLN N CA sing N N 104 GLN N H sing N N 105 GLN N H2 sing N N 106 GLN CA C sing N N 107 GLN CA CB sing N N 108 GLN CA HA sing N N 109 GLN C O doub N N 110 GLN C OXT sing N N 111 GLN CB CG sing N N 112 GLN CB HB2 sing N N 113 GLN CB HB3 sing N N 114 GLN CG CD sing N N 115 GLN CG HG2 sing N N 116 GLN CG HG3 sing N N 117 GLN CD OE1 doub N N 118 GLN CD NE2 sing N N 119 GLN NE2 HE21 sing N N 120 GLN NE2 HE22 sing N N 121 GLN OXT HXT sing N N 122 GLU N CA sing N N 123 GLU N H sing N N 124 GLU N H2 sing N N 125 GLU CA C sing N N 126 GLU CA CB sing N N 127 GLU CA HA sing N N 128 GLU C O doub N N 129 GLU C OXT sing N N 130 GLU CB CG sing N N 131 GLU CB HB2 sing N N 132 GLU CB HB3 sing N N 133 GLU CG CD sing N N 134 GLU CG HG2 sing N N 135 GLU CG HG3 sing N N 136 GLU CD OE1 doub N N 137 GLU CD OE2 sing N N 138 GLU OE2 HE2 sing N N 139 GLU OXT HXT sing N N 140 GLY N CA sing N N 141 GLY N H sing N N 142 GLY N H2 sing N N 143 GLY CA C sing N N 144 GLY CA HA2 sing N N 145 GLY CA HA3 sing N N 146 GLY C O doub N N 147 GLY C OXT sing N N 148 GLY OXT HXT sing N N 149 HIS N CA sing N N 150 HIS N H sing N N 151 HIS N H2 sing N N 152 HIS CA C sing N N 153 HIS CA CB sing N N 154 HIS CA HA sing N N 155 HIS C O doub N N 156 HIS C OXT sing N N 157 HIS CB CG sing N N 158 HIS CB HB2 sing N N 159 HIS CB HB3 sing N N 160 HIS CG ND1 sing Y N 161 HIS CG CD2 doub Y N 162 HIS ND1 CE1 doub Y N 163 HIS ND1 HD1 sing N N 164 HIS CD2 NE2 sing Y N 165 HIS CD2 HD2 sing N N 166 HIS CE1 NE2 sing Y N 167 HIS CE1 HE1 sing N N 168 HIS NE2 HE2 sing N N 169 HIS OXT HXT sing N N 170 HOH O H1 sing N N 171 HOH O H2 sing N N 172 HT7 N CB sing N N 173 HT7 CB CG sing N N 174 HT7 CB CA sing N N 175 HT7 CG CD sing N N 176 HT7 CD CE2 sing Y N 177 HT7 CD CE1 doub Y N 178 HT7 CE2 CZ3 sing Y N 179 HT7 CE2 CZ2 doub Y N 180 HT7 CZ3 CH3 doub Y N 181 HT7 CH3 CT2 sing Y N 182 HT7 CT2 CH2 doub Y N 183 HT7 CH2 CZ2 sing Y N 184 HT7 CZ2 NZ1 sing Y N 185 HT7 NZ1 CE1 sing Y N 186 HT7 CA C sing N N 187 HT7 C O doub N N 188 HT7 C OXT sing N N 189 HT7 N H sing N N 190 HT7 N H2 sing N N 191 HT7 CB HB sing N N 192 HT7 CG HA1 sing N N 193 HT7 CG HB2 sing N N 194 HT7 CA HA sing N N 195 HT7 CA HC2 sing N N 196 HT7 CE1 HE1 sing N N 197 HT7 CZ3 HZ3 sing N N 198 HT7 CH3 HH3 sing N N 199 HT7 CT2 HT2 sing N N 200 HT7 CH2 HH2 sing N N 201 HT7 NZ1 HZ1 sing N N 202 HT7 OXT HXT sing N N 203 ILE N CA sing N N 204 ILE N H sing N N 205 ILE N H2 sing N N 206 ILE CA C sing N N 207 ILE CA CB sing N N 208 ILE CA HA sing N N 209 ILE C O doub N N 210 ILE C OXT sing N N 211 ILE CB CG1 sing N N 212 ILE CB CG2 sing N N 213 ILE CB HB sing N N 214 ILE CG1 CD1 sing N N 215 ILE CG1 HG12 sing N N 216 ILE CG1 HG13 sing N N 217 ILE CG2 HG21 sing N N 218 ILE CG2 HG22 sing N N 219 ILE CG2 HG23 sing N N 220 ILE CD1 HD11 sing N N 221 ILE CD1 HD12 sing N N 222 ILE CD1 HD13 sing N N 223 ILE OXT HXT sing N N 224 LEU N CA sing N N 225 LEU N H sing N N 226 LEU N H2 sing N N 227 LEU CA C sing N N 228 LEU CA CB sing N N 229 LEU CA HA sing N N 230 LEU C O doub N N 231 LEU C OXT sing N N 232 LEU CB CG sing N N 233 LEU CB HB2 sing N N 234 LEU CB HB3 sing N N 235 LEU CG CD1 sing N N 236 LEU CG CD2 sing N N 237 LEU CG HG sing N N 238 LEU CD1 HD11 sing N N 239 LEU CD1 HD12 sing N N 240 LEU CD1 HD13 sing N N 241 LEU CD2 HD21 sing N N 242 LEU CD2 HD22 sing N N 243 LEU CD2 HD23 sing N N 244 LEU OXT HXT sing N N 245 LYS N CA sing N N 246 LYS N H sing N N 247 LYS N H2 sing N N 248 LYS CA C sing N N 249 LYS CA CB sing N N 250 LYS CA HA sing N N 251 LYS C O doub N N 252 LYS C OXT sing N N 253 LYS CB CG sing N N 254 LYS CB HB2 sing N N 255 LYS CB HB3 sing N N 256 LYS CG CD sing N N 257 LYS CG HG2 sing N N 258 LYS CG HG3 sing N N 259 LYS CD CE sing N N 260 LYS CD HD2 sing N N 261 LYS CD HD3 sing N N 262 LYS CE NZ sing N N 263 LYS CE HE2 sing N N 264 LYS CE HE3 sing N N 265 LYS NZ HZ1 sing N N 266 LYS NZ HZ2 sing N N 267 LYS NZ HZ3 sing N N 268 LYS OXT HXT sing N N 269 MET N CA sing N N 270 MET N H sing N N 271 MET N H2 sing N N 272 MET CA C sing N N 273 MET CA CB sing N N 274 MET CA HA sing N N 275 MET C O doub N N 276 MET C OXT sing N N 277 MET CB CG sing N N 278 MET CB HB2 sing N N 279 MET CB HB3 sing N N 280 MET CG SD sing N N 281 MET CG HG2 sing N N 282 MET CG HG3 sing N N 283 MET SD CE sing N N 284 MET CE HE1 sing N N 285 MET CE HE2 sing N N 286 MET CE HE3 sing N N 287 MET OXT HXT sing N N 288 NLE N CA sing N N 289 NLE N H sing N N 290 NLE N H2 sing N N 291 NLE CA C sing N N 292 NLE CA CB sing N N 293 NLE CA HA sing N N 294 NLE C O doub N N 295 NLE C OXT sing N N 296 NLE OXT HXT sing N N 297 NLE CB CG sing N N 298 NLE CB HB2 sing N N 299 NLE CB HB3 sing N N 300 NLE CG CD sing N N 301 NLE CG HG2 sing N N 302 NLE CG HG3 sing N N 303 NLE CD CE sing N N 304 NLE CD HD2 sing N N 305 NLE CD HD3 sing N N 306 NLE CE HE1 sing N N 307 NLE CE HE2 sing N N 308 NLE CE HE3 sing N N 309 PHE N CA sing N N 310 PHE N H sing N N 311 PHE N H2 sing N N 312 PHE CA C sing N N 313 PHE CA CB sing N N 314 PHE CA HA sing N N 315 PHE C O doub N N 316 PHE C OXT sing N N 317 PHE CB CG sing N N 318 PHE CB HB2 sing N N 319 PHE CB HB3 sing N N 320 PHE CG CD1 doub Y N 321 PHE CG CD2 sing Y N 322 PHE CD1 CE1 sing Y N 323 PHE CD1 HD1 sing N N 324 PHE CD2 CE2 doub Y N 325 PHE CD2 HD2 sing N N 326 PHE CE1 CZ doub Y N 327 PHE CE1 HE1 sing N N 328 PHE CE2 CZ sing Y N 329 PHE CE2 HE2 sing N N 330 PHE CZ HZ sing N N 331 PHE OXT HXT sing N N 332 PRO N CA sing N N 333 PRO N CD sing N N 334 PRO N H sing N N 335 PRO CA C sing N N 336 PRO CA CB sing N N 337 PRO CA HA sing N N 338 PRO C O doub N N 339 PRO C OXT sing N N 340 PRO CB CG sing N N 341 PRO CB HB2 sing N N 342 PRO CB HB3 sing N N 343 PRO CG CD sing N N 344 PRO CG HG2 sing N N 345 PRO CG HG3 sing N N 346 PRO CD HD2 sing N N 347 PRO CD HD3 sing N N 348 PRO OXT HXT sing N N 349 SER N CA sing N N 350 SER N H sing N N 351 SER N H2 sing N N 352 SER CA C sing N N 353 SER CA CB sing N N 354 SER CA HA sing N N 355 SER C O doub N N 356 SER C OXT sing N N 357 SER CB OG sing N N 358 SER CB HB2 sing N N 359 SER CB HB3 sing N N 360 SER OG HG sing N N 361 SER OXT HXT sing N N 362 THR N CA sing N N 363 THR N H sing N N 364 THR N H2 sing N N 365 THR CA C sing N N 366 THR CA CB sing N N 367 THR CA HA sing N N 368 THR C O doub N N 369 THR C OXT sing N N 370 THR CB OG1 sing N N 371 THR CB CG2 sing N N 372 THR CB HB sing N N 373 THR OG1 HG1 sing N N 374 THR CG2 HG21 sing N N 375 THR CG2 HG22 sing N N 376 THR CG2 HG23 sing N N 377 THR OXT HXT sing N N 378 TRP N CA sing N N 379 TRP N H sing N N 380 TRP N H2 sing N N 381 TRP CA C sing N N 382 TRP CA CB sing N N 383 TRP CA HA sing N N 384 TRP C O doub N N 385 TRP C OXT sing N N 386 TRP CB CG sing N N 387 TRP CB HB2 sing N N 388 TRP CB HB3 sing N N 389 TRP CG CD1 doub Y N 390 TRP CG CD2 sing Y N 391 TRP CD1 NE1 sing Y N 392 TRP CD1 HD1 sing N N 393 TRP CD2 CE2 doub Y N 394 TRP CD2 CE3 sing Y N 395 TRP NE1 CE2 sing Y N 396 TRP NE1 HE1 sing N N 397 TRP CE2 CZ2 sing Y N 398 TRP CE3 CZ3 doub Y N 399 TRP CE3 HE3 sing N N 400 TRP CZ2 CH2 doub Y N 401 TRP CZ2 HZ2 sing N N 402 TRP CZ3 CH2 sing Y N 403 TRP CZ3 HZ3 sing N N 404 TRP CH2 HH2 sing N N 405 TRP OXT HXT sing N N 406 TYR N CA sing N N 407 TYR N H sing N N 408 TYR N H2 sing N N 409 TYR CA C sing N N 410 TYR CA CB sing N N 411 TYR CA HA sing N N 412 TYR C O doub N N 413 TYR C OXT sing N N 414 TYR CB CG sing N N 415 TYR CB HB2 sing N N 416 TYR CB HB3 sing N N 417 TYR CG CD1 doub Y N 418 TYR CG CD2 sing Y N 419 TYR CD1 CE1 sing Y N 420 TYR CD1 HD1 sing N N 421 TYR CD2 CE2 doub Y N 422 TYR CD2 HD2 sing N N 423 TYR CE1 CZ doub Y N 424 TYR CE1 HE1 sing N N 425 TYR CE2 CZ sing Y N 426 TYR CE2 HE2 sing N N 427 TYR CZ OH sing N N 428 TYR OH HH sing N N 429 TYR OXT HXT sing N N 430 VAL N CA sing N N 431 VAL N H sing N N 432 VAL N H2 sing N N 433 VAL CA C sing N N 434 VAL CA CB sing N N 435 VAL CA HA sing N N 436 VAL C O doub N N 437 VAL C OXT sing N N 438 VAL CB CG1 sing N N 439 VAL CB CG2 sing N N 440 VAL CB HB sing N N 441 VAL CG1 HG11 sing N N 442 VAL CG1 HG12 sing N N 443 VAL CG1 HG13 sing N N 444 VAL CG2 HG21 sing N N 445 VAL CG2 HG22 sing N N 446 VAL CG2 HG23 sing N N 447 VAL OXT HXT sing N N 448 XPC N H sing N N 449 XPC N H2 sing N N 450 XPC CB N sing N N 451 XPC CB CG sing N N 452 XPC CG HGA sing N N 453 XPC ND CG sing N N 454 XPC ND HND sing N N 455 XPC CE ND sing N N 456 XPC CE HE sing N N 457 XPC CE CA sing N N 458 XPC CA CB sing N N 459 XPC CA HA sing N N 460 XPC C CA sing N N 461 XPC C OXT sing N N 462 XPC O C doub N N 463 XPC HB CB sing N N 464 XPC HG CG sing N N 465 XPC HEA CE sing N N 466 XPC OXT HXT sing N N 467 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM056414 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 XPC ? ? XPC ? ? 'SUBJECT OF INVESTIGATION' ? 2 B3E ? ? B3E ? ? 'SUBJECT OF INVESTIGATION' ? 3 HT7 ? ? HT7 ? ? 'SUBJECT OF INVESTIGATION' ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1VPF _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #