data_6E8W # _entry.id 6E8W # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6E8W pdb_00006e8w 10.2210/pdb6e8w/pdb WWPDB D_1000235921 ? ? BMRB 30503 ? 10.13018/BMR30503 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-09-05 2 'Structure model' 1 1 2018-09-19 3 'Structure model' 1 2 2018-10-03 4 'Structure model' 1 3 2019-12-18 5 'Structure model' 1 4 2023-06-14 6 'Structure model' 1 5 2024-05-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 4 'Structure model' 'Author supporting evidence' 6 4 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' Other 9 6 'Structure model' 'Data collection' 10 6 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' citation 3 3 'Structure model' citation_author 4 4 'Structure model' pdbx_audit_support 5 4 'Structure model' pdbx_nmr_software 6 4 'Structure model' pdbx_nmr_spectrometer 7 5 'Structure model' database_2 8 5 'Structure model' pdbx_database_status 9 6 'Structure model' chem_comp_atom 10 6 'Structure model' chem_comp_bond 11 6 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_abbrev' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 2 'Structure model' '_citation.title' 4 3 'Structure model' '_citation.journal_volume' 5 3 'Structure model' '_citation.page_first' 6 3 'Structure model' '_citation.page_last' 7 3 'Structure model' '_citation_author.identifier_ORCID' 8 4 'Structure model' '_pdbx_audit_support.funding_organization' 9 4 'Structure model' '_pdbx_nmr_software.name' 10 4 'Structure model' '_pdbx_nmr_spectrometer.model' 11 5 'Structure model' '_database_2.pdbx_DOI' 12 5 'Structure model' '_database_2.pdbx_database_accession' 13 5 'Structure model' '_pdbx_database_status.status_code_nmr_data' 14 6 'Structure model' '_database_2.pdbx_DOI' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6E8W _pdbx_database_status.recvd_initial_deposition_date 2018-07-31 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'MPER-TM Domain of HIV-1 envelope glycoprotein (Env)' _pdbx_database_related.db_id 30503 _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Fu, Q.' 1 0000-0002-7445-2355 'Shaik, M.M.' 2 ? 'Cai, Y.' 3 ? 'Ghantous, F.' 4 ? 'Piai, A.' 5 ? 'Peng, H.' 6 ? 'Rits-Volloch, S.' 7 ? 'Liu, Z.' 8 ? 'Harrison, S.C.' 9 ? 'Seaman, M.S.' 10 ? 'Chen, B.' 11 ? 'Chou, J.J.' 12 0000-0002-4442-0344 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Proc. Natl. Acad. Sci. U.S.A.' _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 115 _citation.language ? _citation.page_first E8892 _citation.page_last E8899 _citation.title 'Structure of the membrane proximal external region of HIV-1 envelope glycoprotein.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.1807259115 _citation.pdbx_database_id_PubMed 30185554 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fu, Q.' 1 ? primary 'Shaik, M.M.' 2 ? primary 'Cai, Y.' 3 ? primary 'Ghantous, F.' 4 ? primary 'Piai, A.' 5 0000-0002-5264-1980 primary 'Peng, H.' 6 ? primary 'Rits-Volloch, S.' 7 ? primary 'Liu, Z.' 8 ? primary 'Harrison, S.C.' 9 ? primary 'Seaman, M.S.' 10 ? primary 'Chen, B.' 11 ? primary 'Chou, J.J.' 12 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Envelope glycoprotein gp160' _entity.formula_weight 6179.373 _entity.pdbx_number_of_molecules 3 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'Helical transmembrane residues 653-703' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code LLELDKWASLWNWFDITNWLWYIRIFIIIVGSLIGLRIVFAVLSLVNRVRQ _entity_poly.pdbx_seq_one_letter_code_can LLELDKWASLWNWFDITNWLWYIRIFIIIVGSLIGLRIVFAVLSLVNRVRQ _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 LEU n 1 3 GLU n 1 4 LEU n 1 5 ASP n 1 6 LYS n 1 7 TRP n 1 8 ALA n 1 9 SER n 1 10 LEU n 1 11 TRP n 1 12 ASN n 1 13 TRP n 1 14 PHE n 1 15 ASP n 1 16 ILE n 1 17 THR n 1 18 ASN n 1 19 TRP n 1 20 LEU n 1 21 TRP n 1 22 TYR n 1 23 ILE n 1 24 ARG n 1 25 ILE n 1 26 PHE n 1 27 ILE n 1 28 ILE n 1 29 ILE n 1 30 VAL n 1 31 GLY n 1 32 SER n 1 33 LEU n 1 34 ILE n 1 35 GLY n 1 36 LEU n 1 37 ARG n 1 38 ILE n 1 39 VAL n 1 40 PHE n 1 41 ALA n 1 42 VAL n 1 43 LEU n 1 44 SER n 1 45 LEU n 1 46 VAL n 1 47 ASN n 1 48 ARG n 1 49 VAL n 1 50 ARG n 1 51 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 51 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene env _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human immunodeficiency virus 1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11676 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details 'fused to C-terminus of the trpLE' _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pMM - LR6' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 660 660 LEU LEU A . n A 1 2 LEU 2 661 661 LEU LEU A . n A 1 3 GLU 3 662 662 GLU GLU A . n A 1 4 LEU 4 663 663 LEU LEU A . n A 1 5 ASP 5 664 664 ASP ASP A . n A 1 6 LYS 6 665 665 LYS LYS A . n A 1 7 TRP 7 666 666 TRP TRP A . n A 1 8 ALA 8 667 667 ALA ALA A . n A 1 9 SER 9 668 668 SER SER A . n A 1 10 LEU 10 669 669 LEU LEU A . n A 1 11 TRP 11 670 670 TRP TRP A . n A 1 12 ASN 12 671 671 ASN ASN A . n A 1 13 TRP 13 672 672 TRP TRP A . n A 1 14 PHE 14 673 673 PHE PHE A . n A 1 15 ASP 15 674 674 ASP ASP A . n A 1 16 ILE 16 675 675 ILE ILE A . n A 1 17 THR 17 676 676 THR THR A . n A 1 18 ASN 18 677 677 ASN ASN A . n A 1 19 TRP 19 678 678 TRP TRP A . n A 1 20 LEU 20 679 679 LEU LEU A . n A 1 21 TRP 21 680 680 TRP TRP A . n A 1 22 TYR 22 681 681 TYR TYR A . n A 1 23 ILE 23 682 682 ILE ILE A . n A 1 24 ARG 24 683 683 ARG ARG A . n A 1 25 ILE 25 684 684 ILE ILE A . n A 1 26 PHE 26 685 685 PHE PHE A . n A 1 27 ILE 27 686 686 ILE ILE A . n A 1 28 ILE 28 687 687 ILE ILE A . n A 1 29 ILE 29 688 688 ILE ILE A . n A 1 30 VAL 30 689 689 VAL VAL A . n A 1 31 GLY 31 690 690 GLY GLY A . n A 1 32 SER 32 691 691 SER SER A . n A 1 33 LEU 33 692 692 LEU LEU A . n A 1 34 ILE 34 693 693 ILE ILE A . n A 1 35 GLY 35 694 694 GLY GLY A . n A 1 36 LEU 36 695 695 LEU LEU A . n A 1 37 ARG 37 696 696 ARG ARG A . n A 1 38 ILE 38 697 697 ILE ILE A . n A 1 39 VAL 39 698 698 VAL VAL A . n A 1 40 PHE 40 699 699 PHE PHE A . n A 1 41 ALA 41 700 700 ALA ALA A . n A 1 42 VAL 42 701 701 VAL VAL A . n A 1 43 LEU 43 702 702 LEU LEU A . n A 1 44 SER 44 703 703 SER SER A . n A 1 45 LEU 45 704 704 LEU LEU A . n A 1 46 VAL 46 705 705 VAL VAL A . n A 1 47 ASN 47 706 706 ASN ASN A . n A 1 48 ARG 48 707 707 ARG ARG A . n A 1 49 VAL 49 708 708 VAL VAL A . n A 1 50 ARG 50 709 709 ARG ARG A . n A 1 51 GLN 51 710 710 GLN GLN A . n B 1 1 LEU 1 660 660 LEU LEU B . n B 1 2 LEU 2 661 661 LEU LEU B . n B 1 3 GLU 3 662 662 GLU GLU B . n B 1 4 LEU 4 663 663 LEU LEU B . n B 1 5 ASP 5 664 664 ASP ASP B . n B 1 6 LYS 6 665 665 LYS LYS B . n B 1 7 TRP 7 666 666 TRP TRP B . n B 1 8 ALA 8 667 667 ALA ALA B . n B 1 9 SER 9 668 668 SER SER B . n B 1 10 LEU 10 669 669 LEU LEU B . n B 1 11 TRP 11 670 670 TRP TRP B . n B 1 12 ASN 12 671 671 ASN ASN B . n B 1 13 TRP 13 672 672 TRP TRP B . n B 1 14 PHE 14 673 673 PHE PHE B . n B 1 15 ASP 15 674 674 ASP ASP B . n B 1 16 ILE 16 675 675 ILE ILE B . n B 1 17 THR 17 676 676 THR THR B . n B 1 18 ASN 18 677 677 ASN ASN B . n B 1 19 TRP 19 678 678 TRP TRP B . n B 1 20 LEU 20 679 679 LEU LEU B . n B 1 21 TRP 21 680 680 TRP TRP B . n B 1 22 TYR 22 681 681 TYR TYR B . n B 1 23 ILE 23 682 682 ILE ILE B . n B 1 24 ARG 24 683 683 ARG ARG B . n B 1 25 ILE 25 684 684 ILE ILE B . n B 1 26 PHE 26 685 685 PHE PHE B . n B 1 27 ILE 27 686 686 ILE ILE B . n B 1 28 ILE 28 687 687 ILE ILE B . n B 1 29 ILE 29 688 688 ILE ILE B . n B 1 30 VAL 30 689 689 VAL VAL B . n B 1 31 GLY 31 690 690 GLY GLY B . n B 1 32 SER 32 691 691 SER SER B . n B 1 33 LEU 33 692 692 LEU LEU B . n B 1 34 ILE 34 693 693 ILE ILE B . n B 1 35 GLY 35 694 694 GLY GLY B . n B 1 36 LEU 36 695 695 LEU LEU B . n B 1 37 ARG 37 696 696 ARG ARG B . n B 1 38 ILE 38 697 697 ILE ILE B . n B 1 39 VAL 39 698 698 VAL VAL B . n B 1 40 PHE 40 699 699 PHE PHE B . n B 1 41 ALA 41 700 700 ALA ALA B . n B 1 42 VAL 42 701 701 VAL VAL B . n B 1 43 LEU 43 702 702 LEU LEU B . n B 1 44 SER 44 703 703 SER SER B . n B 1 45 LEU 45 704 704 LEU LEU B . n B 1 46 VAL 46 705 705 VAL VAL B . n B 1 47 ASN 47 706 706 ASN ASN B . n B 1 48 ARG 48 707 707 ARG ARG B . n B 1 49 VAL 49 708 708 VAL VAL B . n B 1 50 ARG 50 709 709 ARG ARG B . n B 1 51 GLN 51 710 710 GLN GLN B . n C 1 1 LEU 1 660 660 LEU LEU C . n C 1 2 LEU 2 661 661 LEU LEU C . n C 1 3 GLU 3 662 662 GLU GLU C . n C 1 4 LEU 4 663 663 LEU LEU C . n C 1 5 ASP 5 664 664 ASP ASP C . n C 1 6 LYS 6 665 665 LYS LYS C . n C 1 7 TRP 7 666 666 TRP TRP C . n C 1 8 ALA 8 667 667 ALA ALA C . n C 1 9 SER 9 668 668 SER SER C . n C 1 10 LEU 10 669 669 LEU LEU C . n C 1 11 TRP 11 670 670 TRP TRP C . n C 1 12 ASN 12 671 671 ASN ASN C . n C 1 13 TRP 13 672 672 TRP TRP C . n C 1 14 PHE 14 673 673 PHE PHE C . n C 1 15 ASP 15 674 674 ASP ASP C . n C 1 16 ILE 16 675 675 ILE ILE C . n C 1 17 THR 17 676 676 THR THR C . n C 1 18 ASN 18 677 677 ASN ASN C . n C 1 19 TRP 19 678 678 TRP TRP C . n C 1 20 LEU 20 679 679 LEU LEU C . n C 1 21 TRP 21 680 680 TRP TRP C . n C 1 22 TYR 22 681 681 TYR TYR C . n C 1 23 ILE 23 682 682 ILE ILE C . n C 1 24 ARG 24 683 683 ARG ARG C . n C 1 25 ILE 25 684 684 ILE ILE C . n C 1 26 PHE 26 685 685 PHE PHE C . n C 1 27 ILE 27 686 686 ILE ILE C . n C 1 28 ILE 28 687 687 ILE ILE C . n C 1 29 ILE 29 688 688 ILE ILE C . n C 1 30 VAL 30 689 689 VAL VAL C . n C 1 31 GLY 31 690 690 GLY GLY C . n C 1 32 SER 32 691 691 SER SER C . n C 1 33 LEU 33 692 692 LEU LEU C . n C 1 34 ILE 34 693 693 ILE ILE C . n C 1 35 GLY 35 694 694 GLY GLY C . n C 1 36 LEU 36 695 695 LEU LEU C . n C 1 37 ARG 37 696 696 ARG ARG C . n C 1 38 ILE 38 697 697 ILE ILE C . n C 1 39 VAL 39 698 698 VAL VAL C . n C 1 40 PHE 40 699 699 PHE PHE C . n C 1 41 ALA 41 700 700 ALA ALA C . n C 1 42 VAL 42 701 701 VAL VAL C . n C 1 43 LEU 43 702 702 LEU LEU C . n C 1 44 SER 44 703 703 SER SER C . n C 1 45 LEU 45 704 704 LEU LEU C . n C 1 46 VAL 46 705 705 VAL VAL C . n C 1 47 ASN 47 706 706 ASN ASN C . n C 1 48 ARG 48 707 707 ARG ARG C . n C 1 49 VAL 49 708 708 VAL VAL C . n C 1 50 ARG 50 709 709 ARG ARG C . n C 1 51 GLN 51 710 710 GLN GLN C . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6E8W _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6E8W _struct.title 'MPER-TM Domain of HIV-1 envelope glycoprotein (Env)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6E8W _struct_keywords.text 'MPER-TMD HIV-1 Env gp41, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q74849_9HIV1 _struct_ref.pdbx_db_accession Q74849 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code LLELDKWASLWNWFDITNWLWYIRIFIIIVGSLIGLRIVFAVLSLVNRVRQ _struct_ref.pdbx_align_begin 653 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6E8W A 1 ? 51 ? Q74849 653 ? 703 ? 660 710 2 1 6E8W B 1 ? 51 ? Q74849 653 ? 703 ? 660 710 3 1 6E8W C 1 ? 51 ? Q74849 653 ? 703 ? 660 710 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3680 ? 1 MORE -26 ? 1 'SSA (A^2)' 14250 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support cross-linking _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLU A 3 ? SER A 9 ? GLU A 662 SER A 668 1 ? 7 HELX_P HELX_P2 AA2 LEU A 10 ? ASN A 12 ? LEU A 669 ASN A 671 5 ? 3 HELX_P HELX_P3 AA3 PHE A 14 ? LEU A 20 ? PHE A 673 LEU A 679 1 ? 7 HELX_P HELX_P4 AA4 TYR A 22 ? ILE A 38 ? TYR A 681 ILE A 697 1 ? 17 HELX_P HELX_P5 AA5 VAL A 39 ? ASN A 47 ? VAL A 698 ASN A 706 1 ? 9 HELX_P HELX_P6 AA6 GLU B 3 ? ALA B 8 ? GLU B 662 ALA B 667 1 ? 6 HELX_P HELX_P7 AA7 PHE B 14 ? LEU B 20 ? PHE B 673 LEU B 679 1 ? 7 HELX_P HELX_P8 AA8 TYR B 22 ? VAL B 30 ? TYR B 681 VAL B 689 1 ? 9 HELX_P HELX_P9 AA9 SER B 32 ? ILE B 38 ? SER B 691 ILE B 697 1 ? 7 HELX_P HELX_P10 AB1 ILE B 38 ? ARG B 50 ? ILE B 697 ARG B 709 1 ? 13 HELX_P HELX_P11 AB2 GLU C 3 ? ALA C 8 ? GLU C 662 ALA C 667 1 ? 6 HELX_P HELX_P12 AB3 SER C 9 ? TRP C 13 ? SER C 668 TRP C 672 5 ? 5 HELX_P HELX_P13 AB4 PHE C 14 ? LEU C 20 ? PHE C 673 LEU C 679 1 ? 7 HELX_P HELX_P14 AB5 TYR C 22 ? ARG C 37 ? TYR C 681 ARG C 696 1 ? 16 HELX_P HELX_P15 AB6 VAL C 39 ? ARG C 48 ? VAL C 698 ARG C 707 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CB B TYR 681 ? ? CG B TYR 681 ? ? 1.602 1.512 0.090 0.015 N 2 2 CB B TYR 681 ? ? CG B TYR 681 ? ? 1.610 1.512 0.098 0.015 N 3 3 CB A TYR 681 ? ? CG A TYR 681 ? ? 1.604 1.512 0.092 0.015 N 4 4 CB B TYR 681 ? ? CG B TYR 681 ? ? 1.605 1.512 0.093 0.015 N 5 4 CB C TYR 681 ? ? CG C TYR 681 ? ? 1.604 1.512 0.092 0.015 N 6 5 CB A TYR 681 ? ? CG A TYR 681 ? ? 1.604 1.512 0.092 0.015 N 7 6 CB C TYR 681 ? ? CG C TYR 681 ? ? 1.611 1.512 0.099 0.015 N 8 7 CB C TYR 681 ? ? CG C TYR 681 ? ? 1.608 1.512 0.096 0.015 N 9 8 CB C TYR 681 ? ? CG C TYR 681 ? ? 1.604 1.512 0.092 0.015 N 10 9 CB A TYR 681 ? ? CG A TYR 681 ? ? 1.603 1.512 0.091 0.015 N 11 10 CB B TYR 681 ? ? CG B TYR 681 ? ? 1.607 1.512 0.095 0.015 N 12 11 CB A TYR 681 ? ? CG A TYR 681 ? ? 1.611 1.512 0.099 0.015 N 13 11 CB B TYR 681 ? ? CG B TYR 681 ? ? 1.603 1.512 0.091 0.015 N 14 14 CB C TYR 681 ? ? CG C TYR 681 ? ? 1.604 1.512 0.092 0.015 N 15 15 CB C TYR 681 ? ? CG C TYR 681 ? ? 1.605 1.512 0.093 0.015 N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 14 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 683 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 683 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 683 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.39 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 3.09 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 673 ? ? 56.28 -67.19 2 1 PHE B 673 ? ? 55.59 -66.05 3 1 TYR B 681 ? ? -164.40 -28.07 4 1 LEU C 661 ? ? 58.24 96.62 5 1 PHE C 673 ? ? 56.57 -67.85 6 1 TRP C 680 ? ? -152.47 52.84 7 1 TYR C 681 ? ? -165.11 -28.85 8 1 ARG C 709 ? ? -49.81 97.93 9 2 LEU A 661 ? ? 59.58 101.95 10 2 PHE A 673 ? ? 51.56 -8.62 11 2 PHE B 673 ? ? 78.41 -149.54 12 2 LEU C 661 ? ? -51.96 93.63 13 2 PHE C 673 ? ? 60.26 -93.86 14 2 ARG C 709 ? ? 57.76 13.96 15 3 PHE A 673 ? ? 45.05 0.15 16 3 LEU B 661 ? ? 56.29 70.47 17 3 PHE B 673 ? ? 49.21 -3.99 18 3 VAL B 689 ? ? -67.73 1.87 19 3 LEU C 661 ? ? 57.63 105.65 20 3 PHE C 673 ? ? 56.18 -82.35 21 3 VAL C 689 ? ? -67.56 1.93 22 3 ARG C 709 ? ? 25.15 95.76 23 4 LEU A 661 ? ? -95.43 -112.40 24 4 GLU A 662 ? ? 92.23 163.76 25 4 PHE A 673 ? ? 36.33 14.95 26 4 PHE B 673 ? ? 50.76 -51.90 27 4 PHE C 673 ? ? -177.71 146.91 28 4 TYR C 681 ? ? -161.01 70.94 29 5 PHE A 673 ? ? 52.78 -73.81 30 5 LEU B 661 ? ? -165.71 113.22 31 5 PHE B 673 ? ? 53.01 -76.38 32 5 TRP B 680 ? ? -153.19 38.83 33 5 TYR B 681 ? ? -154.60 -36.60 34 5 VAL B 689 ? ? -67.80 8.15 35 5 ARG B 709 ? ? -67.65 -71.15 36 5 LEU C 661 ? ? 60.93 -128.23 37 5 GLU C 662 ? ? 93.14 159.45 38 5 PHE C 673 ? ? 57.83 -90.47 39 6 GLU A 662 ? ? -177.80 135.65 40 6 PHE A 673 ? ? 57.51 -71.12 41 6 ARG A 709 ? ? 39.26 73.59 42 6 LEU B 661 ? ? 64.94 165.60 43 6 PHE B 673 ? ? 57.45 -68.30 44 6 TRP B 680 ? ? -141.58 -14.48 45 6 LEU C 661 ? ? 61.77 109.40 46 6 PHE C 673 ? ? 54.62 -74.59 47 6 VAL C 689 ? ? -68.47 4.03 48 6 ARG C 709 ? ? -64.79 -82.14 49 7 LEU A 661 ? ? 60.89 138.58 50 7 PHE A 673 ? ? 52.26 -15.28 51 7 ASN A 677 ? ? -68.72 0.77 52 7 ARG A 709 ? ? -49.63 108.92 53 7 PHE B 673 ? ? 58.17 -73.51 54 7 TRP B 680 ? ? -158.95 37.20 55 7 TYR B 681 ? ? -150.38 -4.88 56 7 PHE C 673 ? ? 54.51 -70.84 57 7 TRP C 680 ? ? -153.64 2.51 58 7 ARG C 709 ? ? 58.43 -75.18 59 8 PHE A 673 ? ? 48.49 -53.51 60 8 LEU B 661 ? ? -56.83 89.85 61 8 PHE B 673 ? ? 56.08 -75.56 62 8 TYR B 681 ? ? 49.12 6.93 63 8 PHE C 673 ? ? 56.57 -82.30 64 8 ARG C 709 ? ? 39.51 107.41 65 9 LEU A 661 ? ? -78.97 -78.20 66 9 GLU A 662 ? ? 68.62 160.93 67 9 PHE A 673 ? ? 46.41 -10.79 68 9 LEU B 661 ? ? 57.61 79.35 69 9 PHE B 673 ? ? 52.63 -72.11 70 9 TRP B 680 ? ? -159.92 47.86 71 9 TYR B 681 ? ? -154.31 -19.87 72 9 GLU C 662 ? ? -167.12 -169.52 73 9 PHE C 673 ? ? 54.69 -69.81 74 9 VAL C 689 ? ? -68.07 0.49 75 10 LEU A 661 ? ? 60.80 94.85 76 10 PHE A 673 ? ? 50.63 -66.23 77 10 TYR A 681 ? ? -171.75 67.65 78 10 VAL A 689 ? ? -67.68 0.60 79 10 ARG A 709 ? ? 56.22 157.08 80 10 PHE B 673 ? ? 50.94 -72.27 81 10 ARG B 709 ? ? 53.02 -82.19 82 10 PHE C 673 ? ? 47.31 -65.44 83 10 TRP C 680 ? ? -152.18 50.80 84 10 TYR C 681 ? ? -162.44 -24.96 85 10 VAL C 689 ? ? -67.35 0.81 86 10 ARG C 709 ? ? 56.25 111.23 87 11 PHE A 673 ? ? 60.50 -45.85 88 11 PHE B 673 ? ? 42.25 -60.49 89 11 PHE C 673 ? ? 51.39 -71.57 90 12 PHE A 673 ? ? 47.14 -74.73 91 12 PHE B 673 ? ? 41.51 -75.28 92 12 TRP B 680 ? ? -141.00 -11.14 93 12 VAL B 689 ? ? -68.49 11.71 94 12 PHE C 673 ? ? 53.56 -73.98 95 12 TRP C 680 ? ? -93.40 -61.02 96 12 ARG C 709 ? ? 56.63 109.16 97 13 PHE A 673 ? ? 56.20 -13.34 98 13 ARG A 709 ? ? -27.16 114.11 99 13 LEU B 661 ? ? -73.05 -75.15 100 13 GLU B 662 ? ? 98.54 159.55 101 13 PHE B 673 ? ? 47.62 -56.27 102 13 LEU C 661 ? ? -54.19 178.70 103 13 GLU C 662 ? ? 119.27 173.17 104 13 PHE C 673 ? ? 46.39 -81.51 105 14 LEU A 661 ? ? 65.06 114.60 106 14 PHE A 673 ? ? 57.07 -66.02 107 14 TRP A 680 ? ? -74.03 -86.52 108 14 TYR A 681 ? ? -152.52 53.03 109 14 LEU B 661 ? ? 62.78 150.06 110 14 PHE B 673 ? ? 57.47 -83.11 111 14 ARG B 709 ? ? 40.09 76.35 112 14 LEU C 661 ? ? 62.63 91.58 113 14 PHE C 673 ? ? 62.62 -119.96 114 14 TRP C 680 ? ? -142.52 -20.76 115 15 PHE A 673 ? ? 62.04 -92.14 116 15 VAL A 689 ? ? -69.45 2.15 117 15 LEU B 661 ? ? 61.53 121.95 118 15 GLU B 662 ? ? 172.08 171.59 119 15 PHE B 673 ? ? 52.84 -72.28 120 15 TRP B 680 ? ? -157.46 47.03 121 15 TYR B 681 ? ? -156.60 -14.75 122 15 ARG B 709 ? ? 44.23 101.56 123 15 LEU C 661 ? ? 60.73 83.47 124 15 PHE C 673 ? ? 54.53 -82.49 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 9 ARG B 696 ? ? 0.092 'SIDE CHAIN' 2 11 ARG A 683 ? ? 0.089 'SIDE CHAIN' 3 11 ARG A 696 ? ? 0.125 'SIDE CHAIN' # _pdbx_nmr_ensemble.entry_id 6E8W _pdbx_nmr_ensemble.conformers_calculated_total_number 150 _pdbx_nmr_ensemble.conformers_submitted_total_number 15 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6E8W _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '15N, 2H Envelope glycoprotein gp160, 50 mM DMPC, 100 mM DHPC, 90% H2O/10% D2O' '90% H2O/10% D2O' '15N, 2H' bicelle ? 2 '15N, 2H, 13C Envelope glycoprotein gp160, 50 mM DMPC, 100 mM DHPC, 90% H2O/10% D2O' '90% H2O/10% D2O' '15N, 2H, 13C' bicelle ? 3 '15N, 13C Envelope glycoprotein gp160, 50 mM [U-99% 2H] DMPC, 100 mM [U-99% 2H] DHPC, 90% H2O/10% D2O' '90% H2O/10% D2O' '15N, 13C' bicelle ? 4 '15N, 2H mixed with 13C(15%) Envelope glycoprotein gp160, 50 mM [U-99% 2H] DMPC, 100 mM [U-99% 2H] DHPC, 90% H2O/10% D2O' '90% H2O/10% D2O' '15N, 2H mixed with 13C(15%)' bicelle ? 5 '15N, 2H mixed with 13C Envelope glycoprotein gp160, 50 mM [U-99% 2H] DMPC, 100 mM [U-99% 2H] DHPC, 90% H2O/10% D2O' '90% H2O/10% D2O' '15N, 2H mixed with 13C' bicelle ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 DMPC 50 ? mM 'natural abundance' 1 DHPC 100 ? mM 'natural abundance' 2 DMPC 50 ? mM 'natural abundance' 2 DHPC 100 ? mM 'natural abundance' 3 DMPC 50 ? mM '[U-99% 2H]' 3 DHPC 100 ? mM '[U-99% 2H]' 4 DMPC 50 ? mM '[U-99% 2H]' 4 DHPC 100 ? mM '[U-99% 2H]' 5 DMPC 50 ? mM '[U-99% 2H]' 5 DHPC 100 ? mM '[U-99% 2H]' 1 'Envelope glycoprotein gp160' ? ? ? '15N, 2H' 2 'Envelope glycoprotein gp160' ? ? ? '[U-13C; U-15N; U-2H]' 3 'Envelope glycoprotein gp160' ? ? ? '[U-100% 13C; U-100% 15N]' 4 'Envelope glycoprotein gp160' ? ? ? '15N, 2H mixed with 13C(15%)' 5 'Envelope glycoprotein gp160' ? ? ? '15N, 2H mixed with 13C' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 308 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.7 _pdbx_nmr_exptl_sample_conditions.ionic_strength 20 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label Bicelle _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-15N Trosy HSQC' 3 isotropic 2 1 2 '3D HNCA' 3 isotropic 3 1 2 '3D HN(CO)CA' 3 isotropic 4 1 2 '3D HNCO' 3 isotropic 5 1 3 '3D 1H-15N NOESY tr-HSQC' 2 isotropic 9 1 3 '3D 1H-13C NOESY' 2 isotropic 8 1 4 '3D 1H-15N NOESY tr-HSQC' 1 isotropic 7 1 4 '3D 1H-13C NOESY' 1 isotropic 6 1 5 '3D Jch Modulated 1H-15N NOESY' 1 isotropic # _pdbx_nmr_refine.entry_id 6E8W _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 2 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'chemical shift assignment' XEASY ? 'Bartels et al.' 2 refinement 'X-PLOR NIH' 2.48 'Schwieters, Kuszewski, Tjandra and Clore' 3 processing NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 4 collection TopSpin ? 'Bruker Biospin' 5 'structure calculation' 'X-PLOR NIH' 2.48 'Schwieters, Kuszewski, Tjandra and Clore' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 ILE N N N N 123 ILE CA C N S 124 ILE C C N N 125 ILE O O N N 126 ILE CB C N S 127 ILE CG1 C N N 128 ILE CG2 C N N 129 ILE CD1 C N N 130 ILE OXT O N N 131 ILE H H N N 132 ILE H2 H N N 133 ILE HA H N N 134 ILE HB H N N 135 ILE HG12 H N N 136 ILE HG13 H N N 137 ILE HG21 H N N 138 ILE HG22 H N N 139 ILE HG23 H N N 140 ILE HD11 H N N 141 ILE HD12 H N N 142 ILE HD13 H N N 143 ILE HXT H N N 144 LEU N N N N 145 LEU CA C N S 146 LEU C C N N 147 LEU O O N N 148 LEU CB C N N 149 LEU CG C N N 150 LEU CD1 C N N 151 LEU CD2 C N N 152 LEU OXT O N N 153 LEU H H N N 154 LEU H2 H N N 155 LEU HA H N N 156 LEU HB2 H N N 157 LEU HB3 H N N 158 LEU HG H N N 159 LEU HD11 H N N 160 LEU HD12 H N N 161 LEU HD13 H N N 162 LEU HD21 H N N 163 LEU HD22 H N N 164 LEU HD23 H N N 165 LEU HXT H N N 166 LYS N N N N 167 LYS CA C N S 168 LYS C C N N 169 LYS O O N N 170 LYS CB C N N 171 LYS CG C N N 172 LYS CD C N N 173 LYS CE C N N 174 LYS NZ N N N 175 LYS OXT O N N 176 LYS H H N N 177 LYS H2 H N N 178 LYS HA H N N 179 LYS HB2 H N N 180 LYS HB3 H N N 181 LYS HG2 H N N 182 LYS HG3 H N N 183 LYS HD2 H N N 184 LYS HD3 H N N 185 LYS HE2 H N N 186 LYS HE3 H N N 187 LYS HZ1 H N N 188 LYS HZ2 H N N 189 LYS HZ3 H N N 190 LYS HXT H N N 191 PHE N N N N 192 PHE CA C N S 193 PHE C C N N 194 PHE O O N N 195 PHE CB C N N 196 PHE CG C Y N 197 PHE CD1 C Y N 198 PHE CD2 C Y N 199 PHE CE1 C Y N 200 PHE CE2 C Y N 201 PHE CZ C Y N 202 PHE OXT O N N 203 PHE H H N N 204 PHE H2 H N N 205 PHE HA H N N 206 PHE HB2 H N N 207 PHE HB3 H N N 208 PHE HD1 H N N 209 PHE HD2 H N N 210 PHE HE1 H N N 211 PHE HE2 H N N 212 PHE HZ H N N 213 PHE HXT H N N 214 SER N N N N 215 SER CA C N S 216 SER C C N N 217 SER O O N N 218 SER CB C N N 219 SER OG O N N 220 SER OXT O N N 221 SER H H N N 222 SER H2 H N N 223 SER HA H N N 224 SER HB2 H N N 225 SER HB3 H N N 226 SER HG H N N 227 SER HXT H N N 228 THR N N N N 229 THR CA C N S 230 THR C C N N 231 THR O O N N 232 THR CB C N R 233 THR OG1 O N N 234 THR CG2 C N N 235 THR OXT O N N 236 THR H H N N 237 THR H2 H N N 238 THR HA H N N 239 THR HB H N N 240 THR HG1 H N N 241 THR HG21 H N N 242 THR HG22 H N N 243 THR HG23 H N N 244 THR HXT H N N 245 TRP N N N N 246 TRP CA C N S 247 TRP C C N N 248 TRP O O N N 249 TRP CB C N N 250 TRP CG C Y N 251 TRP CD1 C Y N 252 TRP CD2 C Y N 253 TRP NE1 N Y N 254 TRP CE2 C Y N 255 TRP CE3 C Y N 256 TRP CZ2 C Y N 257 TRP CZ3 C Y N 258 TRP CH2 C Y N 259 TRP OXT O N N 260 TRP H H N N 261 TRP H2 H N N 262 TRP HA H N N 263 TRP HB2 H N N 264 TRP HB3 H N N 265 TRP HD1 H N N 266 TRP HE1 H N N 267 TRP HE3 H N N 268 TRP HZ2 H N N 269 TRP HZ3 H N N 270 TRP HH2 H N N 271 TRP HXT H N N 272 TYR N N N N 273 TYR CA C N S 274 TYR C C N N 275 TYR O O N N 276 TYR CB C N N 277 TYR CG C Y N 278 TYR CD1 C Y N 279 TYR CD2 C Y N 280 TYR CE1 C Y N 281 TYR CE2 C Y N 282 TYR CZ C Y N 283 TYR OH O N N 284 TYR OXT O N N 285 TYR H H N N 286 TYR H2 H N N 287 TYR HA H N N 288 TYR HB2 H N N 289 TYR HB3 H N N 290 TYR HD1 H N N 291 TYR HD2 H N N 292 TYR HE1 H N N 293 TYR HE2 H N N 294 TYR HH H N N 295 TYR HXT H N N 296 VAL N N N N 297 VAL CA C N S 298 VAL C C N N 299 VAL O O N N 300 VAL CB C N N 301 VAL CG1 C N N 302 VAL CG2 C N N 303 VAL OXT O N N 304 VAL H H N N 305 VAL H2 H N N 306 VAL HA H N N 307 VAL HB H N N 308 VAL HG11 H N N 309 VAL HG12 H N N 310 VAL HG13 H N N 311 VAL HG21 H N N 312 VAL HG22 H N N 313 VAL HG23 H N N 314 VAL HXT H N N 315 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 ILE N CA sing N N 116 ILE N H sing N N 117 ILE N H2 sing N N 118 ILE CA C sing N N 119 ILE CA CB sing N N 120 ILE CA HA sing N N 121 ILE C O doub N N 122 ILE C OXT sing N N 123 ILE CB CG1 sing N N 124 ILE CB CG2 sing N N 125 ILE CB HB sing N N 126 ILE CG1 CD1 sing N N 127 ILE CG1 HG12 sing N N 128 ILE CG1 HG13 sing N N 129 ILE CG2 HG21 sing N N 130 ILE CG2 HG22 sing N N 131 ILE CG2 HG23 sing N N 132 ILE CD1 HD11 sing N N 133 ILE CD1 HD12 sing N N 134 ILE CD1 HD13 sing N N 135 ILE OXT HXT sing N N 136 LEU N CA sing N N 137 LEU N H sing N N 138 LEU N H2 sing N N 139 LEU CA C sing N N 140 LEU CA CB sing N N 141 LEU CA HA sing N N 142 LEU C O doub N N 143 LEU C OXT sing N N 144 LEU CB CG sing N N 145 LEU CB HB2 sing N N 146 LEU CB HB3 sing N N 147 LEU CG CD1 sing N N 148 LEU CG CD2 sing N N 149 LEU CG HG sing N N 150 LEU CD1 HD11 sing N N 151 LEU CD1 HD12 sing N N 152 LEU CD1 HD13 sing N N 153 LEU CD2 HD21 sing N N 154 LEU CD2 HD22 sing N N 155 LEU CD2 HD23 sing N N 156 LEU OXT HXT sing N N 157 LYS N CA sing N N 158 LYS N H sing N N 159 LYS N H2 sing N N 160 LYS CA C sing N N 161 LYS CA CB sing N N 162 LYS CA HA sing N N 163 LYS C O doub N N 164 LYS C OXT sing N N 165 LYS CB CG sing N N 166 LYS CB HB2 sing N N 167 LYS CB HB3 sing N N 168 LYS CG CD sing N N 169 LYS CG HG2 sing N N 170 LYS CG HG3 sing N N 171 LYS CD CE sing N N 172 LYS CD HD2 sing N N 173 LYS CD HD3 sing N N 174 LYS CE NZ sing N N 175 LYS CE HE2 sing N N 176 LYS CE HE3 sing N N 177 LYS NZ HZ1 sing N N 178 LYS NZ HZ2 sing N N 179 LYS NZ HZ3 sing N N 180 LYS OXT HXT sing N N 181 PHE N CA sing N N 182 PHE N H sing N N 183 PHE N H2 sing N N 184 PHE CA C sing N N 185 PHE CA CB sing N N 186 PHE CA HA sing N N 187 PHE C O doub N N 188 PHE C OXT sing N N 189 PHE CB CG sing N N 190 PHE CB HB2 sing N N 191 PHE CB HB3 sing N N 192 PHE CG CD1 doub Y N 193 PHE CG CD2 sing Y N 194 PHE CD1 CE1 sing Y N 195 PHE CD1 HD1 sing N N 196 PHE CD2 CE2 doub Y N 197 PHE CD2 HD2 sing N N 198 PHE CE1 CZ doub Y N 199 PHE CE1 HE1 sing N N 200 PHE CE2 CZ sing Y N 201 PHE CE2 HE2 sing N N 202 PHE CZ HZ sing N N 203 PHE OXT HXT sing N N 204 SER N CA sing N N 205 SER N H sing N N 206 SER N H2 sing N N 207 SER CA C sing N N 208 SER CA CB sing N N 209 SER CA HA sing N N 210 SER C O doub N N 211 SER C OXT sing N N 212 SER CB OG sing N N 213 SER CB HB2 sing N N 214 SER CB HB3 sing N N 215 SER OG HG sing N N 216 SER OXT HXT sing N N 217 THR N CA sing N N 218 THR N H sing N N 219 THR N H2 sing N N 220 THR CA C sing N N 221 THR CA CB sing N N 222 THR CA HA sing N N 223 THR C O doub N N 224 THR C OXT sing N N 225 THR CB OG1 sing N N 226 THR CB CG2 sing N N 227 THR CB HB sing N N 228 THR OG1 HG1 sing N N 229 THR CG2 HG21 sing N N 230 THR CG2 HG22 sing N N 231 THR CG2 HG23 sing N N 232 THR OXT HXT sing N N 233 TRP N CA sing N N 234 TRP N H sing N N 235 TRP N H2 sing N N 236 TRP CA C sing N N 237 TRP CA CB sing N N 238 TRP CA HA sing N N 239 TRP C O doub N N 240 TRP C OXT sing N N 241 TRP CB CG sing N N 242 TRP CB HB2 sing N N 243 TRP CB HB3 sing N N 244 TRP CG CD1 doub Y N 245 TRP CG CD2 sing Y N 246 TRP CD1 NE1 sing Y N 247 TRP CD1 HD1 sing N N 248 TRP CD2 CE2 doub Y N 249 TRP CD2 CE3 sing Y N 250 TRP NE1 CE2 sing Y N 251 TRP NE1 HE1 sing N N 252 TRP CE2 CZ2 sing Y N 253 TRP CE3 CZ3 doub Y N 254 TRP CE3 HE3 sing N N 255 TRP CZ2 CH2 doub Y N 256 TRP CZ2 HZ2 sing N N 257 TRP CZ3 CH2 sing Y N 258 TRP CZ3 HZ3 sing N N 259 TRP CH2 HH2 sing N N 260 TRP OXT HXT sing N N 261 TYR N CA sing N N 262 TYR N H sing N N 263 TYR N H2 sing N N 264 TYR CA C sing N N 265 TYR CA CB sing N N 266 TYR CA HA sing N N 267 TYR C O doub N N 268 TYR C OXT sing N N 269 TYR CB CG sing N N 270 TYR CB HB2 sing N N 271 TYR CB HB3 sing N N 272 TYR CG CD1 doub Y N 273 TYR CG CD2 sing Y N 274 TYR CD1 CE1 sing Y N 275 TYR CD1 HD1 sing N N 276 TYR CD2 CE2 doub Y N 277 TYR CD2 HD2 sing N N 278 TYR CE1 CZ doub Y N 279 TYR CE1 HE1 sing N N 280 TYR CE2 CZ sing Y N 281 TYR CE2 HE2 sing N N 282 TYR CZ OH sing N N 283 TYR OH HH sing N N 284 TYR OXT HXT sing N N 285 VAL N CA sing N N 286 VAL N H sing N N 287 VAL N H2 sing N N 288 VAL CA C sing N N 289 VAL CA CB sing N N 290 VAL CA HA sing N N 291 VAL C O doub N N 292 VAL C OXT sing N N 293 VAL CB CG1 sing N N 294 VAL CB CG2 sing N N 295 VAL CB HB sing N N 296 VAL CG1 HG11 sing N N 297 VAL CG1 HG12 sing N N 298 VAL CG1 HG13 sing N N 299 VAL CG2 HG21 sing N N 300 VAL CG2 HG22 sing N N 301 VAL CG2 HG23 sing N N 302 VAL OXT HXT sing N N 303 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number AI127193 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 2 'AVANCE III' ? Bruker 900 ? 1 'AVANCE II' ? Bruker 800 ? 3 'AVANCE II' ? Bruker 600 ? # _atom_sites.entry_id 6E8W _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_