data_6EOL # _entry.id 6EOL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.315 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6EOL WWPDB D_1200006972 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6EOL _pdbx_database_status.recvd_initial_deposition_date 2017-10-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Hakansson, M.' 1 ? 'Nilsson, U.J.' 2 0000-0001-5815-9522 'Zetterberg, F.' 3 ? 'Logan, D.T.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country DE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev ChemMedChem _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1860-7187 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 13 _citation.language ? _citation.page_first 133 _citation.page_last 137 _citation.title ;Monosaccharide Derivatives with Low-Nanomolar Lectin Affinity and High Selectivity Based on Combined Fluorine-Amide, Phenyl-Arginine, Sulfur-pi , and Halogen Bond Interactions. ; _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/cmdc.201700744 _citation.pdbx_database_id_PubMed 29194992 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zetterberg, F.R.' 1 0000-0002-7789-8782 primary 'Peterson, K.' 2 0000-0002-4683-8293 primary 'Johnsson, R.E.' 3 0000-0002-9476-6941 primary 'Brimert, T.' 4 ? primary 'Hakansson, M.' 5 ? primary 'Logan, D.T.' 6 0000-0002-0098-8560 primary 'Leffler, H.' 7 0000-0003-4482-8945 primary 'Nilsson, U.J.' 8 ? # _cell.entry_id 6EOL _cell.length_a 36.152 _cell.length_b 58.260 _cell.length_c 62.797 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EOL _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Galectin-3 15735.129 1 ? ? ? ? 2 non-polymer syn 'THIOCYANATE ION' 58.082 2 ? ? ? ? 3 non-polymer syn ;(2~{R},3~{R},4~{S},5~{R},6~{R})-2-(3,4-dichlorophenyl)sulfanyl-6-(hydroxymethyl)-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxane-3,5-diol ; 522.325 1 ? ? ? ? 4 water nat water 18.015 212 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Gal-3,35 kDa lectin,Carbohydrate-binding protein 35,CBP 35,Galactose-specific lectin 3,Galactoside-binding protein,GALBP,IgE-binding protein,L-31,Laminin-binding protein,Lectin L-29,Mac-2 antigen ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFPF ESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI ; _entity_poly.pdbx_seq_one_letter_code_can ;MLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFPF ESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LEU n 1 3 ILE n 1 4 VAL n 1 5 PRO n 1 6 TYR n 1 7 ASN n 1 8 LEU n 1 9 PRO n 1 10 LEU n 1 11 PRO n 1 12 GLY n 1 13 GLY n 1 14 VAL n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 MET n 1 19 LEU n 1 20 ILE n 1 21 THR n 1 22 ILE n 1 23 LEU n 1 24 GLY n 1 25 THR n 1 26 VAL n 1 27 LYS n 1 28 PRO n 1 29 ASN n 1 30 ALA n 1 31 ASN n 1 32 ARG n 1 33 ILE n 1 34 ALA n 1 35 LEU n 1 36 ASP n 1 37 PHE n 1 38 GLN n 1 39 ARG n 1 40 GLY n 1 41 ASN n 1 42 ASP n 1 43 VAL n 1 44 ALA n 1 45 PHE n 1 46 HIS n 1 47 PHE n 1 48 ASN n 1 49 PRO n 1 50 ARG n 1 51 PHE n 1 52 ASN n 1 53 GLU n 1 54 ASN n 1 55 ASN n 1 56 ARG n 1 57 ARG n 1 58 VAL n 1 59 ILE n 1 60 VAL n 1 61 CYS n 1 62 ASN n 1 63 THR n 1 64 LYS n 1 65 LEU n 1 66 ASP n 1 67 ASN n 1 68 ASN n 1 69 TRP n 1 70 GLY n 1 71 ARG n 1 72 GLU n 1 73 GLU n 1 74 ARG n 1 75 GLN n 1 76 SER n 1 77 VAL n 1 78 PHE n 1 79 PRO n 1 80 PHE n 1 81 GLU n 1 82 SER n 1 83 GLY n 1 84 LYS n 1 85 PRO n 1 86 PHE n 1 87 LYS n 1 88 ILE n 1 89 GLN n 1 90 VAL n 1 91 LEU n 1 92 VAL n 1 93 GLU n 1 94 PRO n 1 95 ASP n 1 96 HIS n 1 97 PHE n 1 98 LYS n 1 99 VAL n 1 100 ALA n 1 101 VAL n 1 102 ASN n 1 103 ASP n 1 104 ALA n 1 105 HIS n 1 106 LEU n 1 107 LEU n 1 108 GLN n 1 109 TYR n 1 110 ASN n 1 111 HIS n 1 112 ARG n 1 113 VAL n 1 114 LYS n 1 115 LYS n 1 116 LEU n 1 117 ASN n 1 118 GLU n 1 119 ILE n 1 120 SER n 1 121 LYS n 1 122 LEU n 1 123 GLY n 1 124 ILE n 1 125 SER n 1 126 GLY n 1 127 ASP n 1 128 ILE n 1 129 ASP n 1 130 LEU n 1 131 THR n 1 132 SER n 1 133 ALA n 1 134 SER n 1 135 TYR n 1 136 THR n 1 137 MET n 1 138 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 138 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'LGALS3, MAC2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LEG3_HUMAN _struct_ref.pdbx_db_accession P17931 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFPFE SGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI ; _struct_ref.pdbx_align_begin 114 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6EOL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 138 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P17931 _struct_ref_seq.db_align_beg 114 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 250 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 114 _struct_ref_seq.pdbx_auth_seq_align_end 250 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 6EOL _struct_ref_seq_dif.mon_id MET _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P17931 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'initiating methionine' _struct_ref_seq_dif.pdbx_auth_seq_num 113 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BKH non-polymer . ;(2~{R},3~{R},4~{S},5~{R},6~{R})-2-(3,4-dichlorophenyl)sulfanyl-6-(hydroxymethyl)-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxane-3,5-diol ; ? 'C20 H16 Cl2 F3 N3 O4 S' 522.325 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SCN non-polymer . 'THIOCYANATE ION' ? 'C N S -1' 58.082 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6EOL _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.10 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 41.47 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;20 MG/ML GALECTIN-3C, 100MM NACL, 30 % W/V PEG 4000, 0.4 M NASCN, 8 MM BETA-MERCAPTOETHANOL, 10 MM PHOSHATE, 100 MM MGCL2, 100 MM TRIS/HCL PH 7.5, 1.0 MM LIGAND ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type MARRESEARCH _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-12-09 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'BENT SILICON CRYSTAL' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'MAX II BEAMLINE I911-2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I911-2 _diffrn_source.pdbx_synchrotron_site 'MAX II' # _reflns.entry_id 6EOL _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.5 _reflns.d_resolution_low 30.0 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 21720 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.1 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.3 _reflns.pdbx_Rmerge_I_obs 0.072 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.8 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? _reflns.B_iso_Wilson_estimate 16.20 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 6EOL _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 21720 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.13 _refine.ls_d_res_high 1.50 _refine.ls_percent_reflns_obs 99.3 _refine.ls_R_factor_obs 0.172 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.170 _refine.ls_R_factor_R_free 0.218 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.110 _refine.ls_number_reflns_R_free 1110 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.957 _refine.correlation_coeff_Fo_to_Fc_free 0.928 _refine.B_iso_mean 19.13 _refine.aniso_B[1][1] -5.77130 _refine.aniso_B[2][2] 4.19600 _refine.aniso_B[3][3] 1.57530 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI 0.099 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.087 _refine.pdbx_overall_SU_R_Blow_DPI 0.090 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.094 # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 6EOL _refine_analyze.Luzzati_coordinate_error_obs 0.18 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 1109 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 39 _refine_hist.number_atoms_solvent 212 _refine_hist.number_atoms_total 1360 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 29.13 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.010 ? 2.00 2747 'X-RAY DIFFRACTION' HARMONIC t_angle_deg 1.18 ? 2.00 5019 'X-RAY DIFFRACTION' HARMONIC t_dihedral_angle_d ? ? 2.00 627 'X-RAY DIFFRACTION' SINUSOIDAL t_incorr_chiral_ct ? ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes ? ? 2.00 42 'X-RAY DIFFRACTION' HARMONIC t_gen_planes ? ? 5.00 445 'X-RAY DIFFRACTION' HARMONIC t_it ? ? 20.00 2747 'X-RAY DIFFRACTION' HARMONIC t_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? t_omega_torsion 4.84 ? ? ? 'X-RAY DIFFRACTION' ? t_other_torsion 14.51 ? ? ? 'X-RAY DIFFRACTION' ? t_improper_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_chiral_improper_torsion ? ? 5.00 179 'X-RAY DIFFRACTION' SEMIHARMONIC t_sum_occupancies ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_distance ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_ideal_dist_contact ? ? 4.00 3225 'X-RAY DIFFRACTION' SEMIHARMONIC # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 11 _refine_ls_shell.d_res_high 1.50 _refine_ls_shell.d_res_low 1.57 _refine_ls_shell.number_reflns_R_work 2611 _refine_ls_shell.R_factor_R_work 0.2142 _refine_ls_shell.percent_reflns_obs 96.16 _refine_ls_shell.R_factor_R_free 0.2754 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 5.36 _refine_ls_shell.number_reflns_R_free 148 _refine_ls_shell.number_reflns_all 2759 _refine_ls_shell.R_factor_all 0.2172 _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 6EOL _struct.title 'Human galectin-3c in complex with a galactose derivative' _struct.pdbx_descriptor Galectin-3 _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6EOL _struct_keywords.text 'SUGAR BINDING PROTEIN' _struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id LYS _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 115 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ILE _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 119 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id LYS _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 227 _struct_conf.end_auth_comp_id ILE _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 231 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 VAL 4 A . ? VAL 116 A PRO 5 A ? PRO 117 A 1 -0.59 2 VAL 4 A . ? VAL 116 A PRO 5 A ? PRO 117 A 1 0.59 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 6 ? AA3 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 6 ? PRO A 9 ? TYR A 118 PRO A 121 AA1 2 LYS A 121 ? GLY A 126 ? LYS A 233 GLY A 238 AA1 3 ILE A 33 ? ARG A 39 ? ILE A 145 ARG A 151 AA1 4 ASP A 42 ? GLU A 53 ? ASP A 154 GLU A 165 AA1 5 ARG A 56 ? LEU A 65 ? ARG A 168 LEU A 177 AA1 6 ASN A 68 ? TRP A 69 ? ASN A 180 TRP A 181 AA2 1 TYR A 6 ? PRO A 9 ? TYR A 118 PRO A 121 AA2 2 LYS A 121 ? GLY A 126 ? LYS A 233 GLY A 238 AA2 3 ILE A 33 ? ARG A 39 ? ILE A 145 ARG A 151 AA2 4 ASP A 42 ? GLU A 53 ? ASP A 154 GLU A 165 AA2 5 ARG A 56 ? LEU A 65 ? ARG A 168 LEU A 177 AA2 6 GLU A 73 ? GLN A 75 ? GLU A 185 GLN A 187 AA3 1 ALA A 104 ? ASN A 110 ? ALA A 216 ASN A 222 AA3 2 HIS A 96 ? VAL A 101 ? HIS A 208 VAL A 213 AA3 3 PRO A 85 ? VAL A 92 ? PRO A 197 VAL A 204 AA3 4 MET A 18 ? VAL A 26 ? MET A 130 VAL A 138 AA3 5 ILE A 128 ? MET A 137 ? ILE A 240 MET A 249 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 8 ? N LEU A 120 O LEU A 122 ? O LEU A 234 AA1 2 3 O LYS A 121 ? O LYS A 233 N GLN A 38 ? N GLN A 150 AA1 3 4 N PHE A 37 ? N PHE A 149 O PHE A 45 ? O PHE A 157 AA1 4 5 N ARG A 50 ? N ARG A 162 O VAL A 58 ? O VAL A 170 AA1 5 6 N LEU A 65 ? N LEU A 177 O ASN A 68 ? O ASN A 180 AA2 1 2 N LEU A 8 ? N LEU A 120 O LEU A 122 ? O LEU A 234 AA2 2 3 O LYS A 121 ? O LYS A 233 N GLN A 38 ? N GLN A 150 AA2 3 4 N PHE A 37 ? N PHE A 149 O PHE A 45 ? O PHE A 157 AA2 4 5 N ARG A 50 ? N ARG A 162 O VAL A 58 ? O VAL A 170 AA2 5 6 N CYS A 61 ? N CYS A 173 O GLU A 73 ? O GLU A 185 AA3 1 2 O LEU A 107 ? O LEU A 219 N VAL A 99 ? N VAL A 211 AA3 2 3 O LYS A 98 ? O LYS A 210 N LEU A 91 ? N LEU A 203 AA3 3 4 O VAL A 90 ? O VAL A 202 N ILE A 20 ? N ILE A 132 AA3 4 5 N LEU A 19 ? N LEU A 131 O THR A 136 ? O THR A 248 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SCN 301 ? 6 'binding site for residue SCN A 301' AC2 Software A SCN 302 ? 5 'binding site for residue SCN A 302' AC3 Software A BKH 303 ? 14 'binding site for residue BKH A 303' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP A 36 ? ASP A 148 . ? 1_555 ? 2 AC1 6 LYS A 64 ? LYS A 176 . ? 1_555 ? 3 AC1 6 HOH E . ? HOH A 411 . ? 1_555 ? 4 AC1 6 HOH E . ? HOH A 426 . ? 2_454 ? 5 AC1 6 HOH E . ? HOH A 455 . ? 1_555 ? 6 AC1 6 HOH E . ? HOH A 480 . ? 1_555 ? 7 AC2 5 ARG A 32 ? ARG A 144 . ? 1_555 ? 8 AC2 5 ASN A 48 ? ASN A 160 . ? 1_555 ? 9 AC2 5 ARG A 50 ? ARG A 162 . ? 1_555 ? 10 AC2 5 BKH D . ? BKH A 303 . ? 1_555 ? 11 AC2 5 HOH E . ? HOH A 521 . ? 1_555 ? 12 AC3 14 ARG A 32 ? ARG A 144 . ? 1_555 ? 13 AC3 14 ILE A 33 ? ILE A 145 . ? 1_555 ? 14 AC3 14 ALA A 34 ? ALA A 146 . ? 1_555 ? 15 AC3 14 HIS A 46 ? HIS A 158 . ? 1_555 ? 16 AC3 14 ASN A 48 ? ASN A 160 . ? 1_555 ? 17 AC3 14 ARG A 50 ? ARG A 162 . ? 1_555 ? 18 AC3 14 ASN A 62 ? ASN A 174 . ? 1_555 ? 19 AC3 14 GLY A 70 ? GLY A 182 . ? 1_555 ? 20 AC3 14 GLU A 72 ? GLU A 184 . ? 1_555 ? 21 AC3 14 SER A 125 ? SER A 237 . ? 1_555 ? 22 AC3 14 GLY A 126 ? GLY A 238 . ? 1_555 ? 23 AC3 14 SCN C . ? SCN A 302 . ? 1_555 ? 24 AC3 14 HOH E . ? HOH A 447 . ? 1_555 ? 25 AC3 14 HOH E . ? HOH A 449 . ? 1_555 ? # _atom_sites.entry_id 6EOL _atom_sites.fract_transf_matrix[1][1] 0.027661 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017164 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015924 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL F H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 113 113 MET MET A . n A 1 2 LEU 2 114 114 LEU LEU A . n A 1 3 ILE 3 115 115 ILE ILE A . n A 1 4 VAL 4 116 116 VAL VAL A . n A 1 5 PRO 5 117 117 PRO PRO A . n A 1 6 TYR 6 118 118 TYR TYR A . n A 1 7 ASN 7 119 119 ASN ASN A . n A 1 8 LEU 8 120 120 LEU LEU A . n A 1 9 PRO 9 121 121 PRO PRO A . n A 1 10 LEU 10 122 122 LEU LEU A . n A 1 11 PRO 11 123 123 PRO PRO A . n A 1 12 GLY 12 124 124 GLY GLY A . n A 1 13 GLY 13 125 125 GLY GLY A . n A 1 14 VAL 14 126 126 VAL VAL A . n A 1 15 VAL 15 127 127 VAL VAL A . n A 1 16 PRO 16 128 128 PRO PRO A . n A 1 17 ARG 17 129 129 ARG ARG A . n A 1 18 MET 18 130 130 MET MET A . n A 1 19 LEU 19 131 131 LEU LEU A . n A 1 20 ILE 20 132 132 ILE ILE A . n A 1 21 THR 21 133 133 THR THR A . n A 1 22 ILE 22 134 134 ILE ILE A . n A 1 23 LEU 23 135 135 LEU LEU A . n A 1 24 GLY 24 136 136 GLY GLY A . n A 1 25 THR 25 137 137 THR THR A . n A 1 26 VAL 26 138 138 VAL VAL A . n A 1 27 LYS 27 139 139 LYS LYS A . n A 1 28 PRO 28 140 140 PRO PRO A . n A 1 29 ASN 29 141 141 ASN ASN A . n A 1 30 ALA 30 142 142 ALA ALA A . n A 1 31 ASN 31 143 143 ASN ASN A . n A 1 32 ARG 32 144 144 ARG ARG A . n A 1 33 ILE 33 145 145 ILE ILE A . n A 1 34 ALA 34 146 146 ALA ALA A . n A 1 35 LEU 35 147 147 LEU LEU A . n A 1 36 ASP 36 148 148 ASP ASP A . n A 1 37 PHE 37 149 149 PHE PHE A . n A 1 38 GLN 38 150 150 GLN GLN A . n A 1 39 ARG 39 151 151 ARG ARG A . n A 1 40 GLY 40 152 152 GLY GLY A . n A 1 41 ASN 41 153 153 ASN ASN A . n A 1 42 ASP 42 154 154 ASP ASP A . n A 1 43 VAL 43 155 155 VAL VAL A . n A 1 44 ALA 44 156 156 ALA ALA A . n A 1 45 PHE 45 157 157 PHE PHE A . n A 1 46 HIS 46 158 158 HIS HIS A . n A 1 47 PHE 47 159 159 PHE PHE A . n A 1 48 ASN 48 160 160 ASN ASN A . n A 1 49 PRO 49 161 161 PRO PRO A . n A 1 50 ARG 50 162 162 ARG ARG A . n A 1 51 PHE 51 163 163 PHE PHE A . n A 1 52 ASN 52 164 164 ASN ASN A . n A 1 53 GLU 53 165 165 GLU GLU A . n A 1 54 ASN 54 166 166 ASN ASN A . n A 1 55 ASN 55 167 167 ASN ASN A . n A 1 56 ARG 56 168 168 ARG ARG A . n A 1 57 ARG 57 169 169 ARG ARG A . n A 1 58 VAL 58 170 170 VAL VAL A . n A 1 59 ILE 59 171 171 ILE ILE A . n A 1 60 VAL 60 172 172 VAL VAL A . n A 1 61 CYS 61 173 173 CYS CYS A . n A 1 62 ASN 62 174 174 ASN ASN A . n A 1 63 THR 63 175 175 THR THR A . n A 1 64 LYS 64 176 176 LYS LYS A . n A 1 65 LEU 65 177 177 LEU LEU A . n A 1 66 ASP 66 178 178 ASP ASP A . n A 1 67 ASN 67 179 179 ASN ASN A . n A 1 68 ASN 68 180 180 ASN ASN A . n A 1 69 TRP 69 181 181 TRP TRP A . n A 1 70 GLY 70 182 182 GLY GLY A . n A 1 71 ARG 71 183 183 ARG ARG A . n A 1 72 GLU 72 184 184 GLU GLU A . n A 1 73 GLU 73 185 185 GLU GLU A . n A 1 74 ARG 74 186 186 ARG ARG A . n A 1 75 GLN 75 187 187 GLN GLN A . n A 1 76 SER 76 188 188 SER SER A . n A 1 77 VAL 77 189 189 VAL VAL A . n A 1 78 PHE 78 190 190 PHE PHE A . n A 1 79 PRO 79 191 191 PRO PRO A . n A 1 80 PHE 80 192 192 PHE PHE A . n A 1 81 GLU 81 193 193 GLU GLU A . n A 1 82 SER 82 194 194 SER SER A . n A 1 83 GLY 83 195 195 GLY GLY A . n A 1 84 LYS 84 196 196 LYS LYS A . n A 1 85 PRO 85 197 197 PRO PRO A . n A 1 86 PHE 86 198 198 PHE PHE A . n A 1 87 LYS 87 199 199 LYS LYS A . n A 1 88 ILE 88 200 200 ILE ILE A . n A 1 89 GLN 89 201 201 GLN GLN A . n A 1 90 VAL 90 202 202 VAL VAL A . n A 1 91 LEU 91 203 203 LEU LEU A . n A 1 92 VAL 92 204 204 VAL VAL A . n A 1 93 GLU 93 205 205 GLU GLU A . n A 1 94 PRO 94 206 206 PRO PRO A . n A 1 95 ASP 95 207 207 ASP ASP A . n A 1 96 HIS 96 208 208 HIS HIS A . n A 1 97 PHE 97 209 209 PHE PHE A . n A 1 98 LYS 98 210 210 LYS LYS A . n A 1 99 VAL 99 211 211 VAL VAL A . n A 1 100 ALA 100 212 212 ALA ALA A . n A 1 101 VAL 101 213 213 VAL VAL A . n A 1 102 ASN 102 214 214 ASN ASN A . n A 1 103 ASP 103 215 215 ASP ASP A . n A 1 104 ALA 104 216 216 ALA ALA A . n A 1 105 HIS 105 217 217 HIS HIS A . n A 1 106 LEU 106 218 218 LEU LEU A . n A 1 107 LEU 107 219 219 LEU LEU A . n A 1 108 GLN 108 220 220 GLN GLN A . n A 1 109 TYR 109 221 221 TYR TYR A . n A 1 110 ASN 110 222 222 ASN ASN A . n A 1 111 HIS 111 223 223 HIS HIS A . n A 1 112 ARG 112 224 224 ARG ARG A . n A 1 113 VAL 113 225 225 VAL VAL A . n A 1 114 LYS 114 226 226 LYS LYS A . n A 1 115 LYS 115 227 227 LYS LYS A . n A 1 116 LEU 116 228 228 LEU LEU A . n A 1 117 ASN 117 229 229 ASN ASN A . n A 1 118 GLU 118 230 230 GLU GLU A . n A 1 119 ILE 119 231 231 ILE ILE A . n A 1 120 SER 120 232 232 SER SER A . n A 1 121 LYS 121 233 233 LYS LYS A . n A 1 122 LEU 122 234 234 LEU LEU A . n A 1 123 GLY 123 235 235 GLY GLY A . n A 1 124 ILE 124 236 236 ILE ILE A . n A 1 125 SER 125 237 237 SER SER A . n A 1 126 GLY 126 238 238 GLY GLY A . n A 1 127 ASP 127 239 239 ASP ASP A . n A 1 128 ILE 128 240 240 ILE ILE A . n A 1 129 ASP 129 241 241 ASP ASP A . n A 1 130 LEU 130 242 242 LEU LEU A . n A 1 131 THR 131 243 243 THR THR A . n A 1 132 SER 132 244 244 SER SER A . n A 1 133 ALA 133 245 245 ALA ALA A . n A 1 134 SER 134 246 246 SER SER A . n A 1 135 TYR 135 247 247 TYR TYR A . n A 1 136 THR 136 248 248 THR THR A . n A 1 137 MET 137 249 249 MET MET A . n A 1 138 ILE 138 250 250 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SCN 1 301 1002 SCN SCN A . C 2 SCN 1 302 1003 SCN SCN A . D 3 BKH 1 303 1 BKH GB1 A . E 4 HOH 1 401 2023 HOH HOH A . E 4 HOH 2 402 2208 HOH HOH A . E 4 HOH 3 403 2196 HOH HOH A . E 4 HOH 4 404 2055 HOH HOH A . E 4 HOH 5 405 2016 HOH HOH A . E 4 HOH 6 406 2059 HOH HOH A . E 4 HOH 7 407 2042 HOH HOH A . E 4 HOH 8 408 5 HOH HOH A . E 4 HOH 9 409 2142 HOH HOH A . E 4 HOH 10 410 2134 HOH HOH A . E 4 HOH 11 411 2038 HOH HOH A . E 4 HOH 12 412 2096 HOH HOH A . E 4 HOH 13 413 2032 HOH HOH A . E 4 HOH 14 414 2161 HOH HOH A . E 4 HOH 15 415 2211 HOH HOH A . E 4 HOH 16 416 2128 HOH HOH A . E 4 HOH 17 417 2060 HOH HOH A . E 4 HOH 18 418 2180 HOH HOH A . E 4 HOH 19 419 2103 HOH HOH A . E 4 HOH 20 420 2009 HOH HOH A . E 4 HOH 21 421 2017 HOH HOH A . E 4 HOH 22 422 2165 HOH HOH A . E 4 HOH 23 423 2079 HOH HOH A . E 4 HOH 24 424 2031 HOH HOH A . E 4 HOH 25 425 2120 HOH HOH A . E 4 HOH 26 426 2209 HOH HOH A . E 4 HOH 27 427 2197 HOH HOH A . E 4 HOH 28 428 2140 HOH HOH A . E 4 HOH 29 429 2118 HOH HOH A . E 4 HOH 30 430 2033 HOH HOH A . E 4 HOH 31 431 2071 HOH HOH A . E 4 HOH 32 432 2109 HOH HOH A . E 4 HOH 33 433 2184 HOH HOH A . E 4 HOH 34 434 2163 HOH HOH A . E 4 HOH 35 435 2077 HOH HOH A . E 4 HOH 36 436 2057 HOH HOH A . E 4 HOH 37 437 2105 HOH HOH A . E 4 HOH 38 438 2145 HOH HOH A . E 4 HOH 39 439 2026 HOH HOH A . E 4 HOH 40 440 2028 HOH HOH A . E 4 HOH 41 441 2136 HOH HOH A . E 4 HOH 42 442 2051 HOH HOH A . E 4 HOH 43 443 2074 HOH HOH A . E 4 HOH 44 444 2203 HOH HOH A . E 4 HOH 45 445 2094 HOH HOH A . E 4 HOH 46 446 2006 HOH HOH A . E 4 HOH 47 447 2003 HOH HOH A . E 4 HOH 48 448 2202 HOH HOH A . E 4 HOH 49 449 2015 HOH HOH A . E 4 HOH 50 450 2043 HOH HOH A . E 4 HOH 51 451 2035 HOH HOH A . E 4 HOH 52 452 2132 HOH HOH A . E 4 HOH 53 453 2013 HOH HOH A . E 4 HOH 54 454 2144 HOH HOH A . E 4 HOH 55 455 2107 HOH HOH A . E 4 HOH 56 456 2061 HOH HOH A . E 4 HOH 57 457 2049 HOH HOH A . E 4 HOH 58 458 2030 HOH HOH A . E 4 HOH 59 459 2116 HOH HOH A . E 4 HOH 60 460 2162 HOH HOH A . E 4 HOH 61 461 2063 HOH HOH A . E 4 HOH 62 462 2175 HOH HOH A . E 4 HOH 63 463 2129 HOH HOH A . E 4 HOH 64 464 2076 HOH HOH A . E 4 HOH 65 465 2024 HOH HOH A . E 4 HOH 66 466 2157 HOH HOH A . E 4 HOH 67 467 2018 HOH HOH A . E 4 HOH 68 468 2021 HOH HOH A . E 4 HOH 69 469 2010 HOH HOH A . E 4 HOH 70 470 2022 HOH HOH A . E 4 HOH 71 471 2154 HOH HOH A . E 4 HOH 72 472 2019 HOH HOH A . E 4 HOH 73 473 2050 HOH HOH A . E 4 HOH 74 474 2089 HOH HOH A . E 4 HOH 75 475 2040 HOH HOH A . E 4 HOH 76 476 2039 HOH HOH A . E 4 HOH 77 477 2098 HOH HOH A . E 4 HOH 78 478 2114 HOH HOH A . E 4 HOH 79 479 2037 HOH HOH A . E 4 HOH 80 480 2130 HOH HOH A . E 4 HOH 81 481 2156 HOH HOH A . E 4 HOH 82 482 2139 HOH HOH A . E 4 HOH 83 483 2047 HOH HOH A . E 4 HOH 84 484 2072 HOH HOH A . E 4 HOH 85 485 2001 HOH HOH A . E 4 HOH 86 486 2058 HOH HOH A . E 4 HOH 87 487 2095 HOH HOH A . E 4 HOH 88 488 2191 HOH HOH A . E 4 HOH 89 489 2041 HOH HOH A . E 4 HOH 90 490 2073 HOH HOH A . E 4 HOH 91 491 2170 HOH HOH A . E 4 HOH 92 492 2029 HOH HOH A . E 4 HOH 93 493 2148 HOH HOH A . E 4 HOH 94 494 2066 HOH HOH A . E 4 HOH 95 495 2048 HOH HOH A . E 4 HOH 96 496 2151 HOH HOH A . E 4 HOH 97 497 2097 HOH HOH A . E 4 HOH 98 498 2176 HOH HOH A . E 4 HOH 99 499 2110 HOH HOH A . E 4 HOH 100 500 2020 HOH HOH A . E 4 HOH 101 501 3 HOH HOH A . E 4 HOH 102 502 2056 HOH HOH A . E 4 HOH 103 503 2143 HOH HOH A . E 4 HOH 104 504 2115 HOH HOH A . E 4 HOH 105 505 2027 HOH HOH A . E 4 HOH 106 506 2087 HOH HOH A . E 4 HOH 107 507 2070 HOH HOH A . E 4 HOH 108 508 2046 HOH HOH A . E 4 HOH 109 509 2172 HOH HOH A . E 4 HOH 110 510 2190 HOH HOH A . E 4 HOH 111 511 2119 HOH HOH A . E 4 HOH 112 512 2054 HOH HOH A . E 4 HOH 113 513 2177 HOH HOH A . E 4 HOH 114 514 2158 HOH HOH A . E 4 HOH 115 515 2141 HOH HOH A . E 4 HOH 116 516 2067 HOH HOH A . E 4 HOH 117 517 2195 HOH HOH A . E 4 HOH 118 518 2198 HOH HOH A . E 4 HOH 119 519 2052 HOH HOH A . E 4 HOH 120 520 2069 HOH HOH A . E 4 HOH 121 521 2008 HOH HOH A . E 4 HOH 122 522 2053 HOH HOH A . E 4 HOH 123 523 2112 HOH HOH A . E 4 HOH 124 524 2102 HOH HOH A . E 4 HOH 125 525 2150 HOH HOH A . E 4 HOH 126 526 2044 HOH HOH A . E 4 HOH 127 527 2171 HOH HOH A . E 4 HOH 128 528 2187 HOH HOH A . E 4 HOH 129 529 2219 HOH HOH A . E 4 HOH 130 530 2065 HOH HOH A . E 4 HOH 131 531 2099 HOH HOH A . E 4 HOH 132 532 2075 HOH HOH A . E 4 HOH 133 533 2025 HOH HOH A . E 4 HOH 134 534 2004 HOH HOH A . E 4 HOH 135 535 2068 HOH HOH A . E 4 HOH 136 536 2216 HOH HOH A . E 4 HOH 137 537 2045 HOH HOH A . E 4 HOH 138 538 2036 HOH HOH A . E 4 HOH 139 539 2137 HOH HOH A . E 4 HOH 140 540 2014 HOH HOH A . E 4 HOH 141 541 2220 HOH HOH A . E 4 HOH 142 542 2194 HOH HOH A . E 4 HOH 143 543 2011 HOH HOH A . E 4 HOH 144 544 2127 HOH HOH A . E 4 HOH 145 545 2210 HOH HOH A . E 4 HOH 146 546 2007 HOH HOH A . E 4 HOH 147 547 2164 HOH HOH A . E 4 HOH 148 548 2078 HOH HOH A . E 4 HOH 149 549 2 HOH HOH A . E 4 HOH 150 550 2108 HOH HOH A . E 4 HOH 151 551 2138 HOH HOH A . E 4 HOH 152 552 2117 HOH HOH A . E 4 HOH 153 553 2064 HOH HOH A . E 4 HOH 154 554 2080 HOH HOH A . E 4 HOH 155 555 2182 HOH HOH A . E 4 HOH 156 556 2135 HOH HOH A . E 4 HOH 157 557 2159 HOH HOH A . E 4 HOH 158 558 2199 HOH HOH A . E 4 HOH 159 559 2002 HOH HOH A . E 4 HOH 160 560 2192 HOH HOH A . E 4 HOH 161 561 2133 HOH HOH A . E 4 HOH 162 562 2100 HOH HOH A . E 4 HOH 163 563 2168 HOH HOH A . E 4 HOH 164 564 2104 HOH HOH A . E 4 HOH 165 565 2183 HOH HOH A . E 4 HOH 166 566 2205 HOH HOH A . E 4 HOH 167 567 2085 HOH HOH A . E 4 HOH 168 568 2082 HOH HOH A . E 4 HOH 169 569 2092 HOH HOH A . E 4 HOH 170 570 2086 HOH HOH A . E 4 HOH 171 571 2005 HOH HOH A . E 4 HOH 172 572 2124 HOH HOH A . E 4 HOH 173 573 2034 HOH HOH A . E 4 HOH 174 574 2106 HOH HOH A . E 4 HOH 175 575 2090 HOH HOH A . E 4 HOH 176 576 2189 HOH HOH A . E 4 HOH 177 577 2146 HOH HOH A . E 4 HOH 178 578 2152 HOH HOH A . E 4 HOH 179 579 2193 HOH HOH A . E 4 HOH 180 580 2084 HOH HOH A . E 4 HOH 181 581 2081 HOH HOH A . E 4 HOH 182 582 2126 HOH HOH A . E 4 HOH 183 583 2121 HOH HOH A . E 4 HOH 184 584 2125 HOH HOH A . E 4 HOH 185 585 2149 HOH HOH A . E 4 HOH 186 586 2101 HOH HOH A . E 4 HOH 187 587 2122 HOH HOH A . E 4 HOH 188 588 2091 HOH HOH A . E 4 HOH 189 589 2088 HOH HOH A . E 4 HOH 190 590 2186 HOH HOH A . E 4 HOH 191 591 2181 HOH HOH A . E 4 HOH 192 592 2218 HOH HOH A . E 4 HOH 193 593 2178 HOH HOH A . E 4 HOH 194 594 2201 HOH HOH A . E 4 HOH 195 595 2179 HOH HOH A . E 4 HOH 196 596 2167 HOH HOH A . E 4 HOH 197 597 2155 HOH HOH A . E 4 HOH 198 598 2169 HOH HOH A . E 4 HOH 199 599 2062 HOH HOH A . E 4 HOH 200 600 2113 HOH HOH A . E 4 HOH 201 601 2160 HOH HOH A . E 4 HOH 202 602 2153 HOH HOH A . E 4 HOH 203 603 2123 HOH HOH A . E 4 HOH 204 604 2166 HOH HOH A . E 4 HOH 205 605 2185 HOH HOH A . E 4 HOH 206 606 2083 HOH HOH A . E 4 HOH 207 607 2200 HOH HOH A . E 4 HOH 208 608 2012 HOH HOH A . E 4 HOH 209 609 2206 HOH HOH A . E 4 HOH 210 610 2173 HOH HOH A . E 4 HOH 211 611 2147 HOH HOH A . E 4 HOH 212 612 2131 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 250 ? 1 MORE 0 ? 1 'SSA (A^2)' 7740 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-08-22 2 'Structure model' 1 1 2019-10-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Data collection' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category reflns_shell # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -12.7842 _pdbx_refine_tls.origin_y -0.7496 _pdbx_refine_tls.origin_z 6.3555 _pdbx_refine_tls.T[1][1] 0.0036 _pdbx_refine_tls.T[2][2] -0.0293 _pdbx_refine_tls.T[3][3] -0.0583 _pdbx_refine_tls.T[1][2] 0.0027 _pdbx_refine_tls.T[1][3] 0.0048 _pdbx_refine_tls.T[2][3] -0.0051 _pdbx_refine_tls.L[1][1] 0.1606 _pdbx_refine_tls.L[2][2] 1.0675 _pdbx_refine_tls.L[3][3] 1.4507 _pdbx_refine_tls.L[1][2] 0.1085 _pdbx_refine_tls.L[1][3] 0.1017 _pdbx_refine_tls.L[2][3] 0.8129 _pdbx_refine_tls.S[1][1] 0.0005 _pdbx_refine_tls.S[1][2] 0.0014 _pdbx_refine_tls.S[1][3] 0.0233 _pdbx_refine_tls.S[2][1] 0.0042 _pdbx_refine_tls.S[2][2] -0.0025 _pdbx_refine_tls.S[2][3] 0.0157 _pdbx_refine_tls.S[3][1] -0.0514 _pdbx_refine_tls.S[3][2] -0.0293 _pdbx_refine_tls.S[3][3] 0.0020 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details '{ A|* }' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? 2.10.3 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? . 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 129 ? ? 88.77 -1.22 2 1 ASN A 164 ? ? -154.01 74.09 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 611 ? 6.28 . 2 1 O ? A HOH 612 ? 7.58 . # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Swedish Research Council' Sweden 621-2012-2978 1 'Knut and Alice Wallenberg Foundation' Sweden 2013.0022 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'THIOCYANATE ION' SCN 3 ;(2~{R},3~{R},4~{S},5~{R},6~{R})-2-(3,4-dichlorophenyl)sulfanyl-6-(hydroxymethyl)-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxane-3,5-diol ; BKH 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #