data_6F3K # _entry.id 6F3K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6F3K pdb_00006f3k 10.2210/pdb6f3k/pdb WWPDB D_1200007645 ? ? BMRB 34205 ? ? EMDB EMD-4179 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type BMRB . 27211 unspecified BMRB ;Combined solid-state NMR, solution-state NMR and EM data for structure determination of the tetrahedral aminopeptidase TET2 from P. horikoshii ; 34205 unspecified EMDB ;Combined solid-state NMR, solution-state NMR and EM data for structure determination of the tetrahedral aminopeptidase TET2 from P. horikoshii ; EMD-4179 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6F3K _pdbx_database_status.recvd_initial_deposition_date 2017-11-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Gauto, D.F.' 1 ? 'Estrozi, L.F.' 2 ? 'Schwieters, C.D.' 3 ? 'Effantin, G.' 4 ? 'Macek, P.' 5 ? 'Sounier, R.' 6 ? 'Kerfah, R.' 7 ? 'Sivertsen, A.C.' 8 ? 'Colletier, J.P.' 9 ? 'Boisbouvier, J.' 10 ? 'Schoehn, G.' 11 ? 'Favier, A.' 12 ? 'Schanda, P.' 13 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 10 _citation.language ? _citation.page_first 2697 _citation.page_last 2697 _citation.title 'Integrated NMR and cryo-EM atomic-resolution structure determination of a half-megadalton enzyme complex.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-019-10490-9 _citation.pdbx_database_id_PubMed 31217444 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gauto, D.F.' 1 ? primary 'Estrozi, L.F.' 2 0000-0003-2548-2547 primary 'Schwieters, C.D.' 3 ? primary 'Effantin, G.' 4 ? primary 'Macek, P.' 5 ? primary 'Sounier, R.' 6 ? primary 'Sivertsen, A.C.' 7 ? primary 'Schmidt, E.' 8 ? primary 'Kerfah, R.' 9 ? primary 'Mas, G.' 10 ? primary 'Colletier, J.P.' 11 ? primary 'Guntert, P.' 12 0000-0002-2911-7574 primary 'Favier, A.' 13 0000-0003-2511-2300 primary 'Schoehn, G.' 14 0000-0002-1459-3201 primary 'Schanda, P.' 15 0000-0002-9350-7606 primary 'Boisbouvier, J.' 16 0000-0003-3278-3639 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Tetrahedral aminopeptidase' 39071.027 1 3.4.11.- ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'TET aminopeptidase,Leucyl aminopeptidase,PhTET2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MEVRNMVDYELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVDKLGNVIAHKKGEGPKVMIAAHMDQIGLMVTHIE KNGFLRVAPIGGVDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPEDRKKAPDWDQIFIDIGAESKEEAEDMGVKIGT VITWDGRLERLGKHRFVSIAFDDRIAVYTILEVAKQLKDAKADVYFVATVQEEVGLRGARTSAFGIEPDYGFAIDVTIAA DIPGTPEHKQVTHLGKGTAIKIMDRSVICHPTIVRWLEELAKKHEIPYQLEILLGGGTDAGAIHLTKAGVPTGALSVPAR YIHSNTEVVDERDVDATVELMTKALENIHELKI ; _entity_poly.pdbx_seq_one_letter_code_can ;MEVRNMVDYELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVDKLGNVIAHKKGEGPKVMIAAHMDQIGLMVTHIE KNGFLRVAPIGGVDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPEDRKKAPDWDQIFIDIGAESKEEAEDMGVKIGT VITWDGRLERLGKHRFVSIAFDDRIAVYTILEVAKQLKDAKADVYFVATVQEEVGLRGARTSAFGIEPDYGFAIDVTIAA DIPGTPEHKQVTHLGKGTAIKIMDRSVICHPTIVRWLEELAKKHEIPYQLEILLGGGTDAGAIHLTKAGVPTGALSVPAR YIHSNTEVVDERDVDATVELMTKALENIHELKI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 VAL n 1 4 ARG n 1 5 ASN n 1 6 MET n 1 7 VAL n 1 8 ASP n 1 9 TYR n 1 10 GLU n 1 11 LEU n 1 12 LEU n 1 13 LYS n 1 14 LYS n 1 15 VAL n 1 16 VAL n 1 17 GLU n 1 18 ALA n 1 19 PRO n 1 20 GLY n 1 21 VAL n 1 22 SER n 1 23 GLY n 1 24 TYR n 1 25 GLU n 1 26 PHE n 1 27 LEU n 1 28 GLY n 1 29 ILE n 1 30 ARG n 1 31 ASP n 1 32 VAL n 1 33 VAL n 1 34 ILE n 1 35 GLU n 1 36 GLU n 1 37 ILE n 1 38 LYS n 1 39 ASP n 1 40 TYR n 1 41 VAL n 1 42 ASP n 1 43 GLU n 1 44 VAL n 1 45 LYS n 1 46 VAL n 1 47 ASP n 1 48 LYS n 1 49 LEU n 1 50 GLY n 1 51 ASN n 1 52 VAL n 1 53 ILE n 1 54 ALA n 1 55 HIS n 1 56 LYS n 1 57 LYS n 1 58 GLY n 1 59 GLU n 1 60 GLY n 1 61 PRO n 1 62 LYS n 1 63 VAL n 1 64 MET n 1 65 ILE n 1 66 ALA n 1 67 ALA n 1 68 HIS n 1 69 MET n 1 70 ASP n 1 71 GLN n 1 72 ILE n 1 73 GLY n 1 74 LEU n 1 75 MET n 1 76 VAL n 1 77 THR n 1 78 HIS n 1 79 ILE n 1 80 GLU n 1 81 LYS n 1 82 ASN n 1 83 GLY n 1 84 PHE n 1 85 LEU n 1 86 ARG n 1 87 VAL n 1 88 ALA n 1 89 PRO n 1 90 ILE n 1 91 GLY n 1 92 GLY n 1 93 VAL n 1 94 ASP n 1 95 PRO n 1 96 LYS n 1 97 THR n 1 98 LEU n 1 99 ILE n 1 100 ALA n 1 101 GLN n 1 102 ARG n 1 103 PHE n 1 104 LYS n 1 105 VAL n 1 106 TRP n 1 107 ILE n 1 108 ASP n 1 109 LYS n 1 110 GLY n 1 111 LYS n 1 112 PHE n 1 113 ILE n 1 114 TYR n 1 115 GLY n 1 116 VAL n 1 117 GLY n 1 118 ALA n 1 119 SER n 1 120 VAL n 1 121 PRO n 1 122 PRO n 1 123 HIS n 1 124 ILE n 1 125 GLN n 1 126 LYS n 1 127 PRO n 1 128 GLU n 1 129 ASP n 1 130 ARG n 1 131 LYS n 1 132 LYS n 1 133 ALA n 1 134 PRO n 1 135 ASP n 1 136 TRP n 1 137 ASP n 1 138 GLN n 1 139 ILE n 1 140 PHE n 1 141 ILE n 1 142 ASP n 1 143 ILE n 1 144 GLY n 1 145 ALA n 1 146 GLU n 1 147 SER n 1 148 LYS n 1 149 GLU n 1 150 GLU n 1 151 ALA n 1 152 GLU n 1 153 ASP n 1 154 MET n 1 155 GLY n 1 156 VAL n 1 157 LYS n 1 158 ILE n 1 159 GLY n 1 160 THR n 1 161 VAL n 1 162 ILE n 1 163 THR n 1 164 TRP n 1 165 ASP n 1 166 GLY n 1 167 ARG n 1 168 LEU n 1 169 GLU n 1 170 ARG n 1 171 LEU n 1 172 GLY n 1 173 LYS n 1 174 HIS n 1 175 ARG n 1 176 PHE n 1 177 VAL n 1 178 SER n 1 179 ILE n 1 180 ALA n 1 181 PHE n 1 182 ASP n 1 183 ASP n 1 184 ARG n 1 185 ILE n 1 186 ALA n 1 187 VAL n 1 188 TYR n 1 189 THR n 1 190 ILE n 1 191 LEU n 1 192 GLU n 1 193 VAL n 1 194 ALA n 1 195 LYS n 1 196 GLN n 1 197 LEU n 1 198 LYS n 1 199 ASP n 1 200 ALA n 1 201 LYS n 1 202 ALA n 1 203 ASP n 1 204 VAL n 1 205 TYR n 1 206 PHE n 1 207 VAL n 1 208 ALA n 1 209 THR n 1 210 VAL n 1 211 GLN n 1 212 GLU n 1 213 GLU n 1 214 VAL n 1 215 GLY n 1 216 LEU n 1 217 ARG n 1 218 GLY n 1 219 ALA n 1 220 ARG n 1 221 THR n 1 222 SER n 1 223 ALA n 1 224 PHE n 1 225 GLY n 1 226 ILE n 1 227 GLU n 1 228 PRO n 1 229 ASP n 1 230 TYR n 1 231 GLY n 1 232 PHE n 1 233 ALA n 1 234 ILE n 1 235 ASP n 1 236 VAL n 1 237 THR n 1 238 ILE n 1 239 ALA n 1 240 ALA n 1 241 ASP n 1 242 ILE n 1 243 PRO n 1 244 GLY n 1 245 THR n 1 246 PRO n 1 247 GLU n 1 248 HIS n 1 249 LYS n 1 250 GLN n 1 251 VAL n 1 252 THR n 1 253 HIS n 1 254 LEU n 1 255 GLY n 1 256 LYS n 1 257 GLY n 1 258 THR n 1 259 ALA n 1 260 ILE n 1 261 LYS n 1 262 ILE n 1 263 MET n 1 264 ASP n 1 265 ARG n 1 266 SER n 1 267 VAL n 1 268 ILE n 1 269 CYS n 1 270 HIS n 1 271 PRO n 1 272 THR n 1 273 ILE n 1 274 VAL n 1 275 ARG n 1 276 TRP n 1 277 LEU n 1 278 GLU n 1 279 GLU n 1 280 LEU n 1 281 ALA n 1 282 LYS n 1 283 LYS n 1 284 HIS n 1 285 GLU n 1 286 ILE n 1 287 PRO n 1 288 TYR n 1 289 GLN n 1 290 LEU n 1 291 GLU n 1 292 ILE n 1 293 LEU n 1 294 LEU n 1 295 GLY n 1 296 GLY n 1 297 GLY n 1 298 THR n 1 299 ASP n 1 300 ALA n 1 301 GLY n 1 302 ALA n 1 303 ILE n 1 304 HIS n 1 305 LEU n 1 306 THR n 1 307 LYS n 1 308 ALA n 1 309 GLY n 1 310 VAL n 1 311 PRO n 1 312 THR n 1 313 GLY n 1 314 ALA n 1 315 LEU n 1 316 SER n 1 317 VAL n 1 318 PRO n 1 319 ALA n 1 320 ARG n 1 321 TYR n 1 322 ILE n 1 323 HIS n 1 324 SER n 1 325 ASN n 1 326 THR n 1 327 GLU n 1 328 VAL n 1 329 VAL n 1 330 ASP n 1 331 GLU n 1 332 ARG n 1 333 ASP n 1 334 VAL n 1 335 ASP n 1 336 ALA n 1 337 THR n 1 338 VAL n 1 339 GLU n 1 340 LEU n 1 341 MET n 1 342 THR n 1 343 LYS n 1 344 ALA n 1 345 LEU n 1 346 GLU n 1 347 ASN n 1 348 ILE n 1 349 HIS n 1 350 GLU n 1 351 LEU n 1 352 LYS n 1 353 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 353 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'frvX, PH1527' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 70601 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TET_PYRHO _struct_ref.pdbx_db_accession O59196 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MEVRNMVDYELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVDKLGNVIAHKKGEGPKVMIAAHMDQIGLMVTHIE KNGFLRVAPIGGVDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPEDRKKAPDWDQIFIDIGAESKEEAEDMGVKIGT VITWDGRLERLGKHRFVSIAFDDRIAVYTILEVAKQLKDAKADVYFVATVQEEVGLRGARTSAFGIEPDYGFAIDVTIAA DIPGTPEHKQVTHLGKGTAIKIMDRSVICHPTIVRWLEELAKKHEIPYQLEILLGGGTDAGAIHLTKAGVPTGALSVPAR YIHSNTEVVDERDVDATVELMTKALENIHELKI ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6F3K _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 353 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O59196 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 353 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 353 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 'RFDR 3D' 1 isotropic 2 3 3 DARR 1 isotropic 3 2 2 '3D 1H-13C NOESY aliphatic' 2 isotropic 4 3 4 'CCdream (CC)' 2 isotropic 5 3 4 NCO 2 isotropic 6 3 4 NCOCX 2 isotropic 7 3 4 NCACX 2 isotropic 8 3 4 CONCACB 2 isotropic 9 3 4 CANCOCX 2 isotropic 10 1 5 hCANH 1 isotropic 11 1 5 hCONH 1 isotropic 12 1 5 hcoCAcoNH 1 isotropic # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.details _pdbx_nmr_exptl_sample_conditions.ionic_strength_err _pdbx_nmr_exptl_sample_conditions.ionic_strength_units _pdbx_nmr_exptl_sample_conditions.label _pdbx_nmr_exptl_sample_conditions.pH_err _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.pressure_err _pdbx_nmr_exptl_sample_conditions.temperature_err _pdbx_nmr_exptl_sample_conditions.temperature_units 1 300 atm 1 7.5 50 ? ? mM 'MAS_50 kHz' ? pH ? 2 K 3 300 atm 1 7.5 50 ? ? mM '15kHz MAS' ? pH ? ? K 2 328 atm 1 8 50 ? ? mM solution ? pH ? ? K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '20 mM TRIS, 50 mM sodium chloride, 100% H2O' '100% H2O' 2H15N_ILVCHD2 solid ;protein solution at 10 mg/ml was supplemented by methyl-pentanediol, resulting in microcrystalline precipitate. Labeling 2H15N and 13C at methyls of ILV. ; 5 '20 mM TRIS, 50 mM sodium chloride, 100% H2O' '100% H2O' 2H13C15N solid ? 3 '20 mM Tris, 50 mM NaCl, 100% H2O' '100% H2O' LKP-labeled solid ;protein solution at 10 mg/ml was supplemented by methyl-pentanediol, resulting in microcrystalline precipitate. Labeling 13C at all carbons of LKP residues ; 4 '20 mM TRIS, 50 mM sodium chloride, 100% H2O' '100% H2O' '13C15N TET2' solid H2O 2 '50 mM Tris, 50 mM NaCl, 100% D2O' '100% D2O' 2H15N_ILV-CH3 solution ? # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 'AVANCE II' ? Bruker 600 'solid-state NMR' 2 INOVA ? Varian 800 'solution-NMR NOEs' # _pdbx_nmr_ensemble.entry_id 6F3K _pdbx_nmr_ensemble.conformers_calculated_total_number ? _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria ? # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement 'CcpNmr Analysis' ? CCPN 2 'structure calculation' CYANA ? 'Guntert, Mumenthaler and Wuthrich' 3 'chemical shift assignment' 'CcpNmr Analysis' ? CCPN 4 'peak picking' 'CcpNmr Analysis' ? CCPN 5 'structure calculation' Xplor-NIH ? 'Schwieters, Kuszewski, Tjandra and Clore' # loop_ _exptl.absorpt_coefficient_mu _exptl.absorpt_correction_T_max _exptl.absorpt_correction_T_min _exptl.absorpt_correction_type _exptl.absorpt_process_details _exptl.entry_id _exptl.crystals_number _exptl.details _exptl.method _exptl.method_details ? ? ? ? ? 6F3K ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? ? 6F3K ? ? 'SOLUTION NMR' ? ? ? ? ? ? 6F3K ? ? 'SOLID-STATE NMR' ? # _struct.entry_id 6F3K _struct.title ;Combined solid-state NMR, solution-state NMR and EM data for structure determination of the tetrahedral aminopeptidase TET2 from P. horikoshii ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6F3K _struct_keywords.text 'peptidase, protein quality control, oligomer, aminopeptidase, PEPTIDE BINDING PROTEIN' _struct_keywords.pdbx_keywords 'PEPTIDE BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 8 ? ALA A 18 ? ASP A 8 ALA A 18 1 ? 11 HELX_P HELX_P2 AA2 TYR A 24 ? PHE A 26 ? TYR A 24 PHE A 26 5 ? 3 HELX_P HELX_P3 AA3 LEU A 27 ? VAL A 41 ? LEU A 27 VAL A 41 1 ? 15 HELX_P HELX_P4 AA4 GLN A 125 ? LYS A 131 ? GLN A 125 LYS A 131 1 ? 7 HELX_P HELX_P5 AA5 SER A 147 ? GLY A 155 ? SER A 147 GLY A 155 1 ? 9 HELX_P HELX_P6 AA6 ILE A 185 ? LEU A 197 ? ILE A 185 LEU A 197 1 ? 13 HELX_P HELX_P7 AA7 GLY A 215 ? GLU A 227 ? GLY A 215 GLU A 227 1 ? 13 HELX_P HELX_P8 AA8 PRO A 246 ? VAL A 251 ? PRO A 246 VAL A 251 1 ? 6 HELX_P HELX_P9 AA9 HIS A 270 ? HIS A 284 ? HIS A 270 HIS A 284 1 ? 15 HELX_P HELX_P10 AB1 THR A 298 ? HIS A 304 ? THR A 298 HIS A 304 1 ? 7 HELX_P HELX_P11 AB2 ASP A 330 ? LYS A 352 ? ASP A 330 LYS A 352 1 ? 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 68 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 68 A ZN 1001 1_555 ? ? ? ? ? ? ? 2.269 ? ? metalc2 metalc ? ? A ASP 182 OD1 ? ? ? 1_555 B ZN . ZN ? ? A ASP 182 A ZN 1001 1_555 ? ? ? ? ? ? ? 2.505 ? ? metalc3 metalc ? ? A ASP 182 OD2 ? ? ? 1_555 C ZN . ZN ? ? A ASP 182 A ZN 1002 1_555 ? ? ? ? ? ? ? 2.422 ? ? metalc4 metalc ? ? A GLU 213 OE1 ? ? ? 1_555 C ZN . ZN ? ? A GLU 213 A ZN 1002 1_555 ? ? ? ? ? ? ? 2.431 ? ? metalc5 metalc ? ? A GLU 213 OE2 ? ? ? 1_555 C ZN . ZN ? ? A GLU 213 A ZN 1002 1_555 ? ? ? ? ? ? ? 1.897 ? ? metalc6 metalc ? ? A ASP 235 OD1 ? ? ? 1_555 B ZN . ZN ? ? A ASP 235 A ZN 1001 1_555 ? ? ? ? ? ? ? 2.470 ? ? metalc7 metalc ? ? A ASP 235 OD2 ? ? ? 1_555 B ZN . ZN ? ? A ASP 235 A ZN 1001 1_555 ? ? ? ? ? ? ? 2.450 ? ? metalc8 metalc ? ? A HIS 323 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 323 A ZN 1002 1_555 ? ? ? ? ? ? ? 2.240 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 8 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA1 6 7 ? anti-parallel AA1 7 8 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 43 ? VAL A 46 ? GLU A 43 VAL A 46 AA1 2 VAL A 52 ? HIS A 55 ? VAL A 52 HIS A 55 AA1 3 VAL A 204 ? THR A 209 ? VAL A 204 THR A 209 AA1 4 VAL A 63 ? HIS A 68 ? VAL A 63 HIS A 68 AA1 5 GLY A 231 ? ILE A 234 ? GLY A 231 ILE A 234 AA1 6 THR A 312 ? SER A 316 ? THR A 312 SER A 316 AA1 7 ALA A 259 ? MET A 263 ? ALA A 259 MET A 263 AA1 8 GLN A 289 ? ILE A 292 ? GLN A 289 ILE A 292 AA2 1 GLY A 73 ? VAL A 76 ? GLY A 73 VAL A 76 AA2 2 GLY A 159 ? THR A 163 ? GLY A 159 THR A 163 AA2 3 PHE A 103 ? ASP A 108 ? PHE A 103 ASP A 108 AA2 4 LYS A 111 ? GLY A 115 ? LYS A 111 GLY A 115 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LYS A 45 ? N LYS A 45 O ILE A 53 ? O ILE A 53 AA1 2 3 N ALA A 54 ? N ALA A 54 O PHE A 206 ? O PHE A 206 AA1 3 4 O VAL A 207 ? O VAL A 207 N ILE A 65 ? N ILE A 65 AA1 4 5 N MET A 64 ? N MET A 64 O PHE A 232 ? O PHE A 232 AA1 5 6 N ALA A 233 ? N ALA A 233 O LEU A 315 ? O LEU A 315 AA1 6 7 O SER A 316 ? O SER A 316 N ALA A 259 ? N ALA A 259 AA1 7 8 N ILE A 260 ? N ILE A 260 O GLN A 289 ? O GLN A 289 AA2 1 2 N LEU A 74 ? N LEU A 74 O ILE A 162 ? O ILE A 162 AA2 2 3 O VAL A 161 ? O VAL A 161 N TRP A 106 ? N TRP A 106 AA2 3 4 N ASP A 108 ? N ASP A 108 O LYS A 111 ? O LYS A 111 # _atom_sites.entry_id 6F3K _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 GLU 2 2 2 GLU GLU A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 ARG 4 4 4 ARG ARG A . n A 1 5 ASN 5 5 5 ASN ASN A . n A 1 6 MET 6 6 6 MET MET A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 ASP 8 8 8 ASP ASP A . n A 1 9 TYR 9 9 9 TYR TYR A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 VAL 21 21 21 VAL VAL A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 PHE 26 26 26 PHE PHE A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 TYR 40 40 40 TYR TYR A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 ASP 42 42 42 ASP ASP A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 ALA 54 54 54 ALA ALA A . n A 1 55 HIS 55 55 55 HIS HIS A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 LYS 62 62 62 LYS LYS A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 MET 64 64 64 MET MET A . n A 1 65 ILE 65 65 65 ILE ILE A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 HIS 68 68 68 HIS HIS A . n A 1 69 MET 69 69 69 MET MET A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 GLN 71 71 71 GLN GLN A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 MET 75 75 75 MET MET A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 HIS 78 78 78 HIS HIS A . n A 1 79 ILE 79 79 79 ILE ILE A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 ASN 82 82 82 ASN ASN A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 PHE 84 84 84 PHE PHE A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 ARG 86 86 86 ARG ARG A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 PRO 89 89 89 PRO PRO A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 PRO 95 95 95 PRO PRO A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 ILE 99 99 99 ILE ILE A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 GLN 101 101 101 GLN GLN A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 PHE 103 103 103 PHE PHE A . n A 1 104 LYS 104 104 104 LYS LYS A . n A 1 105 VAL 105 105 105 VAL VAL A . n A 1 106 TRP 106 106 106 TRP TRP A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 ASP 108 108 108 ASP ASP A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 LYS 111 111 111 LYS LYS A . n A 1 112 PHE 112 112 112 PHE PHE A . n A 1 113 ILE 113 113 113 ILE ILE A . n A 1 114 TYR 114 114 114 TYR TYR A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 VAL 116 116 116 VAL VAL A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 SER 119 119 119 SER SER A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 PRO 121 121 121 PRO PRO A . n A 1 122 PRO 122 122 122 PRO PRO A . n A 1 123 HIS 123 123 123 HIS HIS A . n A 1 124 ILE 124 124 124 ILE ILE A . n A 1 125 GLN 125 125 125 GLN GLN A . n A 1 126 LYS 126 126 126 LYS LYS A . n A 1 127 PRO 127 127 127 PRO PRO A . n A 1 128 GLU 128 128 128 GLU GLU A . n A 1 129 ASP 129 129 129 ASP ASP A . n A 1 130 ARG 130 130 130 ARG ARG A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 LYS 132 132 132 LYS LYS A . n A 1 133 ALA 133 133 133 ALA ALA A . n A 1 134 PRO 134 134 134 PRO PRO A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 TRP 136 136 136 TRP TRP A . n A 1 137 ASP 137 137 137 ASP ASP A . n A 1 138 GLN 138 138 138 GLN GLN A . n A 1 139 ILE 139 139 139 ILE ILE A . n A 1 140 PHE 140 140 140 PHE PHE A . n A 1 141 ILE 141 141 141 ILE ILE A . n A 1 142 ASP 142 142 142 ASP ASP A . n A 1 143 ILE 143 143 143 ILE ILE A . n A 1 144 GLY 144 144 144 GLY GLY A . n A 1 145 ALA 145 145 145 ALA ALA A . n A 1 146 GLU 146 146 146 GLU GLU A . n A 1 147 SER 147 147 147 SER SER A . n A 1 148 LYS 148 148 148 LYS LYS A . n A 1 149 GLU 149 149 149 GLU GLU A . n A 1 150 GLU 150 150 150 GLU GLU A . n A 1 151 ALA 151 151 151 ALA ALA A . n A 1 152 GLU 152 152 152 GLU GLU A . n A 1 153 ASP 153 153 153 ASP ASP A . n A 1 154 MET 154 154 154 MET MET A . n A 1 155 GLY 155 155 155 GLY GLY A . n A 1 156 VAL 156 156 156 VAL VAL A . n A 1 157 LYS 157 157 157 LYS LYS A . n A 1 158 ILE 158 158 158 ILE ILE A . n A 1 159 GLY 159 159 159 GLY GLY A . n A 1 160 THR 160 160 160 THR THR A . n A 1 161 VAL 161 161 161 VAL VAL A . n A 1 162 ILE 162 162 162 ILE ILE A . n A 1 163 THR 163 163 163 THR THR A . n A 1 164 TRP 164 164 164 TRP TRP A . n A 1 165 ASP 165 165 165 ASP ASP A . n A 1 166 GLY 166 166 166 GLY GLY A . n A 1 167 ARG 167 167 167 ARG ARG A . n A 1 168 LEU 168 168 168 LEU LEU A . n A 1 169 GLU 169 169 169 GLU GLU A . n A 1 170 ARG 170 170 170 ARG ARG A . n A 1 171 LEU 171 171 171 LEU LEU A . n A 1 172 GLY 172 172 172 GLY GLY A . n A 1 173 LYS 173 173 173 LYS LYS A . n A 1 174 HIS 174 174 174 HIS HIS A . n A 1 175 ARG 175 175 175 ARG ARG A . n A 1 176 PHE 176 176 176 PHE PHE A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 SER 178 178 178 SER SER A . n A 1 179 ILE 179 179 179 ILE ILE A . n A 1 180 ALA 180 180 180 ALA ALA A . n A 1 181 PHE 181 181 181 PHE PHE A . n A 1 182 ASP 182 182 182 ASP ASP A . n A 1 183 ASP 183 183 183 ASP ASP A . n A 1 184 ARG 184 184 184 ARG ARG A . n A 1 185 ILE 185 185 185 ILE ILE A . n A 1 186 ALA 186 186 186 ALA ALA A . n A 1 187 VAL 187 187 187 VAL VAL A . n A 1 188 TYR 188 188 188 TYR TYR A . n A 1 189 THR 189 189 189 THR THR A . n A 1 190 ILE 190 190 190 ILE ILE A . n A 1 191 LEU 191 191 191 LEU LEU A . n A 1 192 GLU 192 192 192 GLU GLU A . n A 1 193 VAL 193 193 193 VAL VAL A . n A 1 194 ALA 194 194 194 ALA ALA A . n A 1 195 LYS 195 195 195 LYS LYS A . n A 1 196 GLN 196 196 196 GLN GLN A . n A 1 197 LEU 197 197 197 LEU LEU A . n A 1 198 LYS 198 198 198 LYS LYS A . n A 1 199 ASP 199 199 199 ASP ASP A . n A 1 200 ALA 200 200 200 ALA ALA A . n A 1 201 LYS 201 201 201 LYS LYS A . n A 1 202 ALA 202 202 202 ALA ALA A . n A 1 203 ASP 203 203 203 ASP ASP A . n A 1 204 VAL 204 204 204 VAL VAL A . n A 1 205 TYR 205 205 205 TYR TYR A . n A 1 206 PHE 206 206 206 PHE PHE A . n A 1 207 VAL 207 207 207 VAL VAL A . n A 1 208 ALA 208 208 208 ALA ALA A . n A 1 209 THR 209 209 209 THR THR A . n A 1 210 VAL 210 210 210 VAL VAL A . n A 1 211 GLN 211 211 211 GLN GLN A . n A 1 212 GLU 212 212 212 GLU GLU A . n A 1 213 GLU 213 213 213 GLU GLU A . n A 1 214 VAL 214 214 214 VAL VAL A . n A 1 215 GLY 215 215 215 GLY GLY A . n A 1 216 LEU 216 216 216 LEU LEU A . n A 1 217 ARG 217 217 217 ARG ARG A . n A 1 218 GLY 218 218 218 GLY GLY A . n A 1 219 ALA 219 219 219 ALA ALA A . n A 1 220 ARG 220 220 220 ARG ARG A . n A 1 221 THR 221 221 221 THR THR A . n A 1 222 SER 222 222 222 SER SER A . n A 1 223 ALA 223 223 223 ALA ALA A . n A 1 224 PHE 224 224 224 PHE PHE A . n A 1 225 GLY 225 225 225 GLY GLY A . n A 1 226 ILE 226 226 226 ILE ILE A . n A 1 227 GLU 227 227 227 GLU GLU A . n A 1 228 PRO 228 228 228 PRO PRO A . n A 1 229 ASP 229 229 229 ASP ASP A . n A 1 230 TYR 230 230 230 TYR TYR A . n A 1 231 GLY 231 231 231 GLY GLY A . n A 1 232 PHE 232 232 232 PHE PHE A . n A 1 233 ALA 233 233 233 ALA ALA A . n A 1 234 ILE 234 234 234 ILE ILE A . n A 1 235 ASP 235 235 235 ASP ASP A . n A 1 236 VAL 236 236 236 VAL VAL A . n A 1 237 THR 237 237 237 THR THR A . n A 1 238 ILE 238 238 238 ILE ILE A . n A 1 239 ALA 239 239 239 ALA ALA A . n A 1 240 ALA 240 240 240 ALA ALA A . n A 1 241 ASP 241 241 241 ASP ASP A . n A 1 242 ILE 242 242 242 ILE ILE A . n A 1 243 PRO 243 243 243 PRO PRO A . n A 1 244 GLY 244 244 244 GLY GLY A . n A 1 245 THR 245 245 245 THR THR A . n A 1 246 PRO 246 246 246 PRO PRO A . n A 1 247 GLU 247 247 247 GLU GLU A . n A 1 248 HIS 248 248 248 HIS HIS A . n A 1 249 LYS 249 249 249 LYS LYS A . n A 1 250 GLN 250 250 250 GLN GLN A . n A 1 251 VAL 251 251 251 VAL VAL A . n A 1 252 THR 252 252 252 THR THR A . n A 1 253 HIS 253 253 253 HIS HIS A . n A 1 254 LEU 254 254 254 LEU LEU A . n A 1 255 GLY 255 255 255 GLY GLY A . n A 1 256 LYS 256 256 256 LYS LYS A . n A 1 257 GLY 257 257 257 GLY GLY A . n A 1 258 THR 258 258 258 THR THR A . n A 1 259 ALA 259 259 259 ALA ALA A . n A 1 260 ILE 260 260 260 ILE ILE A . n A 1 261 LYS 261 261 261 LYS LYS A . n A 1 262 ILE 262 262 262 ILE ILE A . n A 1 263 MET 263 263 263 MET MET A . n A 1 264 ASP 264 264 264 ASP ASP A . n A 1 265 ARG 265 265 265 ARG ARG A . n A 1 266 SER 266 266 266 SER SER A . n A 1 267 VAL 267 267 267 VAL VAL A . n A 1 268 ILE 268 268 268 ILE ILE A . n A 1 269 CYS 269 269 269 CYS CYS A . n A 1 270 HIS 270 270 270 HIS HIS A . n A 1 271 PRO 271 271 271 PRO PRO A . n A 1 272 THR 272 272 272 THR THR A . n A 1 273 ILE 273 273 273 ILE ILE A . n A 1 274 VAL 274 274 274 VAL VAL A . n A 1 275 ARG 275 275 275 ARG ARG A . n A 1 276 TRP 276 276 276 TRP TRP A . n A 1 277 LEU 277 277 277 LEU LEU A . n A 1 278 GLU 278 278 278 GLU GLU A . n A 1 279 GLU 279 279 279 GLU GLU A . n A 1 280 LEU 280 280 280 LEU LEU A . n A 1 281 ALA 281 281 281 ALA ALA A . n A 1 282 LYS 282 282 282 LYS LYS A . n A 1 283 LYS 283 283 283 LYS LYS A . n A 1 284 HIS 284 284 284 HIS HIS A . n A 1 285 GLU 285 285 285 GLU GLU A . n A 1 286 ILE 286 286 286 ILE ILE A . n A 1 287 PRO 287 287 287 PRO PRO A . n A 1 288 TYR 288 288 288 TYR TYR A . n A 1 289 GLN 289 289 289 GLN GLN A . n A 1 290 LEU 290 290 290 LEU LEU A . n A 1 291 GLU 291 291 291 GLU GLU A . n A 1 292 ILE 292 292 292 ILE ILE A . n A 1 293 LEU 293 293 293 LEU LEU A . n A 1 294 LEU 294 294 294 LEU LEU A . n A 1 295 GLY 295 295 295 GLY GLY A . n A 1 296 GLY 296 296 296 GLY GLY A . n A 1 297 GLY 297 297 297 GLY GLY A . n A 1 298 THR 298 298 298 THR THR A . n A 1 299 ASP 299 299 299 ASP ASP A . n A 1 300 ALA 300 300 300 ALA ALA A . n A 1 301 GLY 301 301 301 GLY GLY A . n A 1 302 ALA 302 302 302 ALA ALA A . n A 1 303 ILE 303 303 303 ILE ILE A . n A 1 304 HIS 304 304 304 HIS HIS A . n A 1 305 LEU 305 305 305 LEU LEU A . n A 1 306 THR 306 306 306 THR THR A . n A 1 307 LYS 307 307 307 LYS LYS A . n A 1 308 ALA 308 308 308 ALA ALA A . n A 1 309 GLY 309 309 309 GLY GLY A . n A 1 310 VAL 310 310 310 VAL VAL A . n A 1 311 PRO 311 311 311 PRO PRO A . n A 1 312 THR 312 312 312 THR THR A . n A 1 313 GLY 313 313 313 GLY GLY A . n A 1 314 ALA 314 314 314 ALA ALA A . n A 1 315 LEU 315 315 315 LEU LEU A . n A 1 316 SER 316 316 316 SER SER A . n A 1 317 VAL 317 317 317 VAL VAL A . n A 1 318 PRO 318 318 318 PRO PRO A . n A 1 319 ALA 319 319 319 ALA ALA A . n A 1 320 ARG 320 320 320 ARG ARG A . n A 1 321 TYR 321 321 321 TYR TYR A . n A 1 322 ILE 322 322 322 ILE ILE A . n A 1 323 HIS 323 323 323 HIS HIS A . n A 1 324 SER 324 324 324 SER SER A . n A 1 325 ASN 325 325 325 ASN ASN A . n A 1 326 THR 326 326 326 THR THR A . n A 1 327 GLU 327 327 327 GLU GLU A . n A 1 328 VAL 328 328 328 VAL VAL A . n A 1 329 VAL 329 329 329 VAL VAL A . n A 1 330 ASP 330 330 330 ASP ASP A . n A 1 331 GLU 331 331 331 GLU GLU A . n A 1 332 ARG 332 332 332 ARG ARG A . n A 1 333 ASP 333 333 333 ASP ASP A . n A 1 334 VAL 334 334 334 VAL VAL A . n A 1 335 ASP 335 335 335 ASP ASP A . n A 1 336 ALA 336 336 336 ALA ALA A . n A 1 337 THR 337 337 337 THR THR A . n A 1 338 VAL 338 338 338 VAL VAL A . n A 1 339 GLU 339 339 339 GLU GLU A . n A 1 340 LEU 340 340 340 LEU LEU A . n A 1 341 MET 341 341 341 MET MET A . n A 1 342 THR 342 342 342 THR THR A . n A 1 343 LYS 343 343 343 LYS LYS A . n A 1 344 ALA 344 344 344 ALA ALA A . n A 1 345 LEU 345 345 345 LEU LEU A . n A 1 346 GLU 346 346 346 GLU GLU A . n A 1 347 ASN 347 347 347 ASN ASN A . n A 1 348 ILE 348 348 348 ILE ILE A . n A 1 349 HIS 349 349 349 HIS HIS A . n A 1 350 GLU 350 350 350 GLU GLU A . n A 1 351 LEU 351 351 351 LEU LEU A . n A 1 352 LYS 352 352 352 LYS LYS A . n A 1 353 ILE 353 353 353 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 1001 1001 ZN ZN A . C 2 ZN 1 1002 1002 ZN ZN A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 16540 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000 0.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 0.0000 1.0000 0.0000 2 'point symmetry operation' ? ? 0.9999 0.0107 -0.0035 -0.0006 0.0107 -0.9999 -0.0000 0.0837 -0.0035 -0.0000 -1.0000 -0.0270 3 'point symmetry operation' ? ? -1.0000 -0.0000 0.0035 0.3523 -0.0000 -1.0000 -0.0013 0.0854 0.0035 -0.0013 1.0000 -0.0006 4 'point symmetry operation' ? ? -0.9999 -0.0107 -0.0000 0.3527 -0.0107 0.9999 0.0013 0.0020 -0.0000 0.0013 -1.0000 -0.0278 5 'point symmetry operation' ? ? 0.0071 -0.0024 1.0000 0.1888 -1.0000 -0.0047 0.0071 0.2191 0.0047 -1.0000 -0.0024 0.0280 6 'point symmetry operation' ? ? -0.0036 0.0011 1.0000 0.1905 1.0000 0.0047 0.0036 -0.1335 -0.0047 1.0000 -0.0011 -0.0557 7 'point symmetry operation' ? ? -0.0071 -0.0011 -1.0000 0.1635 1.0000 0.0060 -0.0071 -0.1338 0.0060 -1.0000 0.0011 0.0278 8 'point symmetry operation' ? ? 0.0036 0.0024 -1.0000 0.1618 -1.0000 -0.0060 -0.0036 0.2184 -0.0060 1.0000 0.0024 -0.0556 9 'point symmetry operation' ? ? 0.0036 -1.0000 -0.0060 0.2181 0.0024 -0.0060 1.0000 0.0565 -1.0000 -0.0036 0.0024 0.1624 10 'point symmetry operation' ? ? 0.0071 -1.0000 0.0046 0.2192 -0.0025 -0.0047 -1.0000 0.0262 1.0000 0.0071 -0.0025 -0.1911 11 'point symmetry operation' ? ? -0.0071 1.0000 0.0060 0.1347 -0.0011 0.0060 -1.0000 0.0288 -1.0000 -0.0071 0.0011 0.1626 12 'point symmetry operation' ? ? -0.0036 1.0000 -0.0047 0.1339 0.0011 0.0047 1.0000 0.0562 1.0000 0.0036 -0.0011 -0.1901 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 68 ? A HIS 68 ? 1_555 ZN ? B ZN . ? A ZN 1001 ? 1_555 OD1 ? A ASP 182 ? A ASP 182 ? 1_555 82.2 ? 2 NE2 ? A HIS 68 ? A HIS 68 ? 1_555 ZN ? B ZN . ? A ZN 1001 ? 1_555 OD1 ? A ASP 235 ? A ASP 235 ? 1_555 124.2 ? 3 OD1 ? A ASP 182 ? A ASP 182 ? 1_555 ZN ? B ZN . ? A ZN 1001 ? 1_555 OD1 ? A ASP 235 ? A ASP 235 ? 1_555 152.1 ? 4 NE2 ? A HIS 68 ? A HIS 68 ? 1_555 ZN ? B ZN . ? A ZN 1001 ? 1_555 OD2 ? A ASP 235 ? A ASP 235 ? 1_555 71.3 ? 5 OD1 ? A ASP 182 ? A ASP 182 ? 1_555 ZN ? B ZN . ? A ZN 1001 ? 1_555 OD2 ? A ASP 235 ? A ASP 235 ? 1_555 147.9 ? 6 OD1 ? A ASP 235 ? A ASP 235 ? 1_555 ZN ? B ZN . ? A ZN 1001 ? 1_555 OD2 ? A ASP 235 ? A ASP 235 ? 1_555 53.6 ? 7 OD2 ? A ASP 182 ? A ASP 182 ? 1_555 ZN ? C ZN . ? A ZN 1002 ? 1_555 OE1 ? A GLU 213 ? A GLU 213 ? 1_555 112.8 ? 8 OD2 ? A ASP 182 ? A ASP 182 ? 1_555 ZN ? C ZN . ? A ZN 1002 ? 1_555 OE2 ? A GLU 213 ? A GLU 213 ? 1_555 169.6 ? 9 OE1 ? A GLU 213 ? A GLU 213 ? 1_555 ZN ? C ZN . ? A ZN 1002 ? 1_555 OE2 ? A GLU 213 ? A GLU 213 ? 1_555 60.2 ? 10 OD2 ? A ASP 182 ? A ASP 182 ? 1_555 ZN ? C ZN . ? A ZN 1002 ? 1_555 NE2 ? A HIS 323 ? A HIS 323 ? 1_555 72.5 ? 11 OE1 ? A GLU 213 ? A GLU 213 ? 1_555 ZN ? C ZN . ? A ZN 1002 ? 1_555 NE2 ? A HIS 323 ? A HIS 323 ? 1_555 150.5 ? 12 OE2 ? A GLU 213 ? A GLU 213 ? 1_555 ZN ? C ZN . ? A ZN 1002 ? 1_555 NE2 ? A HIS 323 ? A HIS 323 ? 1_555 117.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-03-14 2 'Structure model' 1 1 2019-05-08 3 'Structure model' 1 2 2019-08-21 4 'Structure model' 1 3 2019-08-28 5 'Structure model' 1 4 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Data collection' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' em_admin 2 2 'Structure model' pdbx_database_proc 3 2 'Structure model' pdbx_struct_assembly_gen 4 2 'Structure model' pdbx_struct_oper_list 5 3 'Structure model' pdbx_nmr_software 6 3 'Structure model' pdbx_nmr_spectrometer 7 4 'Structure model' citation 8 4 'Structure model' citation_author 9 5 'Structure model' chem_comp_atom 10 5 'Structure model' chem_comp_bond 11 5 'Structure model' database_2 12 5 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_em_admin.last_update' 2 2 'Structure model' '_pdbx_struct_assembly_gen.oper_expression' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_citation.country' 6 4 'Structure model' '_citation.journal_abbrev' 7 4 'Structure model' '_citation.journal_id_CSD' 8 4 'Structure model' '_citation.journal_id_ISSN' 9 4 'Structure model' '_citation.journal_volume' 10 4 'Structure model' '_citation.page_first' 11 4 'Structure model' '_citation.page_last' 12 4 'Structure model' '_citation.pdbx_database_id_DOI' 13 4 'Structure model' '_citation.pdbx_database_id_PubMed' 14 4 'Structure model' '_citation.title' 15 4 'Structure model' '_citation.year' 16 5 'Structure model' '_database_2.pdbx_DOI' 17 5 'Structure model' '_database_2.pdbx_database_accession' 18 5 'Structure model' '_pdbx_struct_oper_list.name' 19 5 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 TRIS 20 ? mM none 1 'sodium chloride' 50 ? mM none 5 TRIS 20 ? mM none 5 'sodium chloride' 50 ? mM none 3 Tris 20 ? mM none 3 NaCl 50 ? mM none 4 TRIS 20 ? mM none 4 'sodium chloride' 50 ? mM none 2 Tris 50 ? mM none 2 NaCl 50 ? mM none # _em_3d_fitting.entry_id 6F3K _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol OTHER _em_3d_fitting.ref_space ? _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 6F3K _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm 'FOURIER SPACE' _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 27130 _em_3d_reconstruction.resolution 4.1 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 7.4 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details 'H78C/H248C mutant' _em_entity_assembly.name 'tetrahedral amino-peptidase from P. horikoshii' _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 6F3K _em_image_scans.id 1 _em_image_scans.dimension_height ? _em_image_scans.dimension_width ? _em_image_scans.frames_per_image 40 _em_image_scans.image_recording_id 1 _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.used_frames_per_image ? _em_image_scans.citation_id ? _em_image_scans.number_digital_images ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.details ? # _em_imaging.id 1 _em_imaging.entry_id 6F3K _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure 'COMA FREE' _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max 3500 _em_imaging.calibrated_defocus_min 800 _em_imaging.calibrated_magnification 25773 _em_imaging.cryogen NITROGEN _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI POLARA 300' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.0 _em_imaging.nominal_defocus_max ? _em_imaging.nominal_defocus_min ? _em_imaging.nominal_magnification 20000 _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model 'GATAN 626 SINGLE TILT LIQUID NITROGEN CRYO TRANSFER HOLDER' _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 400 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.method ? _em_sample_support.film_material ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature 293 _em_vitrification.cryogen_name ETHANE _em_vitrification.details 'Blotting time 2s, force 1, drain time 0.' _em_vitrification.humidity 100 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.entry_id 6F3K _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 6F3K _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 6F3K _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry T # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 21 ? ? 106.22 84.55 2 1 LEU A 27 ? ? -55.61 -8.27 3 1 MET A 69 ? ? -145.81 52.62 4 1 GLN A 71 ? ? 60.23 -148.15 5 1 LEU A 98 ? ? 26.58 -115.38 6 1 ARG A 102 ? ? 41.26 101.69 7 1 GLN A 125 ? ? 141.31 138.58 8 1 GLN A 138 ? ? 67.38 -147.83 9 1 ASP A 165 ? ? 73.08 147.93 10 1 ARG A 175 ? ? 160.03 156.16 11 1 PHE A 176 ? ? 119.41 133.35 12 1 SER A 178 ? ? -74.07 -111.71 13 1 ILE A 179 ? ? -68.74 23.09 14 1 ASP A 183 ? ? 78.48 -86.89 15 1 ILE A 185 ? ? 144.36 -66.44 16 1 LYS A 198 ? ? -120.10 -75.76 17 1 TYR A 230 ? ? 95.35 153.06 18 1 LEU A 254 ? ? -140.96 -2.46 19 1 ALA A 319 ? ? 90.33 58.30 20 1 GLU A 327 ? ? -165.05 45.69 21 2 VAL A 21 ? ? 87.84 83.52 22 2 LEU A 27 ? ? -55.19 -8.50 23 2 ASN A 51 ? ? 70.46 142.44 24 2 MET A 69 ? ? -152.40 55.75 25 2 GLN A 71 ? ? 62.42 -169.41 26 2 LEU A 98 ? ? 57.89 163.70 27 2 GLN A 125 ? ? 107.96 130.34 28 2 LYS A 131 ? ? -66.77 98.43 29 2 GLN A 138 ? ? 67.76 -115.98 30 2 ASP A 165 ? ? 78.32 126.54 31 2 ARG A 175 ? ? 74.57 74.23 32 2 SER A 178 ? ? -68.44 -96.03 33 2 ASP A 183 ? ? -67.54 -110.11 34 2 ILE A 185 ? ? -148.51 -49.65 35 2 ASP A 199 ? ? 62.28 113.58 36 2 GLN A 211 ? ? 81.43 23.79 37 2 TYR A 230 ? ? 101.13 157.25 38 2 ALA A 319 ? ? 86.42 23.62 39 2 HIS A 323 ? ? -44.84 -101.44 40 2 GLU A 327 ? ? -162.59 117.04 41 2 VAL A 328 ? ? 169.73 149.68 42 3 VAL A 21 ? ? 36.06 81.77 43 3 LEU A 27 ? ? -55.37 -8.23 44 3 MET A 69 ? ? -176.39 41.42 45 3 GLN A 71 ? ? 62.25 -148.01 46 3 LEU A 98 ? ? 25.70 -131.49 47 3 GLN A 125 ? ? 85.14 134.71 48 3 LYS A 131 ? ? -66.99 94.78 49 3 GLN A 138 ? ? 56.12 -142.19 50 3 ASP A 165 ? ? 71.42 139.73 51 3 ARG A 175 ? ? 140.14 156.59 52 3 PHE A 176 ? ? 146.25 122.09 53 3 SER A 178 ? ? -104.30 -66.03 54 3 ILE A 179 ? ? -68.98 20.75 55 3 ILE A 185 ? ? -59.24 10.84 56 3 ASP A 199 ? ? 64.43 114.03 57 3 TYR A 230 ? ? 133.03 138.92 58 3 HIS A 248 ? ? -61.92 1.37 59 3 LYS A 249 ? ? -171.24 -46.72 60 3 THR A 252 ? ? 18.23 -88.06 61 3 ALA A 319 ? ? 85.96 86.81 62 3 HIS A 323 ? ? 61.44 151.16 63 3 GLU A 327 ? ? 170.40 157.39 64 4 VAL A 21 ? ? 105.43 88.09 65 4 LEU A 27 ? ? -55.60 -8.35 66 4 MET A 69 ? ? -169.76 49.37 67 4 GLN A 71 ? ? 56.98 -157.69 68 4 LEU A 98 ? ? -42.65 165.57 69 4 GLN A 125 ? ? 100.56 126.89 70 4 ASP A 137 ? ? -56.97 -9.29 71 4 GLN A 138 ? ? 56.21 -143.77 72 4 ASP A 165 ? ? 76.70 135.82 73 4 ARG A 175 ? ? 152.29 147.96 74 4 PHE A 176 ? ? 133.25 147.19 75 4 SER A 178 ? ? -91.72 -111.77 76 4 ILE A 179 ? ? -68.75 22.86 77 4 ASP A 183 ? ? 85.33 -76.68 78 4 ILE A 185 ? ? 102.38 -67.02 79 4 LYS A 198 ? ? -134.55 -38.04 80 4 TYR A 230 ? ? 117.61 -176.63 81 4 THR A 252 ? ? -44.21 -85.29 82 4 ALA A 319 ? ? 76.40 38.60 83 4 HIS A 323 ? ? 67.01 169.83 84 4 GLU A 327 ? ? -154.27 86.86 85 5 ASN A 5 ? ? 82.58 32.99 86 5 VAL A 21 ? ? 75.11 79.77 87 5 LEU A 27 ? ? -55.57 -8.16 88 5 GLU A 59 ? ? 69.39 139.70 89 5 MET A 69 ? ? -156.78 51.29 90 5 GLN A 71 ? ? 63.33 -161.57 91 5 HIS A 78 ? ? 179.19 174.43 92 5 LEU A 98 ? ? -35.45 146.46 93 5 ARG A 102 ? ? 85.63 -142.30 94 5 PHE A 103 ? ? 82.83 110.97 95 5 GLN A 125 ? ? 115.81 126.14 96 5 GLN A 138 ? ? 65.82 -147.03 97 5 ASP A 165 ? ? 75.52 152.73 98 5 ARG A 175 ? ? 129.27 135.86 99 5 PHE A 176 ? ? 136.39 132.35 100 5 SER A 178 ? ? -99.71 -105.62 101 5 ILE A 179 ? ? -68.86 16.98 102 5 ASP A 183 ? ? 76.93 -77.06 103 5 ILE A 185 ? ? 98.07 -59.88 104 5 ASP A 199 ? ? 53.53 74.81 105 5 GLN A 211 ? ? 72.18 35.44 106 5 TYR A 230 ? ? 90.65 155.50 107 5 ALA A 319 ? ? 79.98 40.71 108 5 HIS A 323 ? ? 73.05 143.25 109 6 VAL A 21 ? ? 93.76 83.69 110 6 LEU A 27 ? ? -55.61 -7.98 111 6 MET A 69 ? ? -153.26 47.33 112 6 GLN A 71 ? ? 66.52 -152.87 113 6 LEU A 98 ? ? 60.09 154.56 114 6 GLN A 125 ? ? 98.37 121.77 115 6 GLN A 138 ? ? 99.28 -152.63 116 6 ASP A 165 ? ? 81.33 148.08 117 6 ARG A 175 ? ? 143.53 152.16 118 6 PHE A 176 ? ? 122.92 153.34 119 6 SER A 178 ? ? -78.46 -77.95 120 6 ASP A 183 ? ? -62.92 -86.65 121 6 ILE A 185 ? ? -180.00 -62.46 122 6 ASP A 199 ? ? 67.36 140.89 123 6 TYR A 230 ? ? 110.99 139.58 124 6 ALA A 319 ? ? 73.92 64.54 125 6 HIS A 323 ? ? -12.55 -120.98 126 6 GLU A 327 ? ? -167.14 63.46 127 7 VAL A 21 ? ? 162.63 93.81 128 7 LEU A 27 ? ? -55.68 -7.81 129 7 MET A 69 ? ? -150.18 61.85 130 7 GLN A 71 ? ? 63.85 -151.43 131 7 LEU A 98 ? ? 52.50 -174.74 132 7 GLN A 125 ? ? 129.11 146.20 133 7 GLN A 138 ? ? 55.97 -136.51 134 7 ASP A 165 ? ? 72.88 134.58 135 7 ARG A 175 ? ? 87.73 80.95 136 7 SER A 178 ? ? -107.29 -88.20 137 7 ILE A 179 ? ? -68.78 1.64 138 7 ASP A 199 ? ? 61.76 111.90 139 7 TYR A 230 ? ? 116.02 148.55 140 7 ALA A 319 ? ? 83.81 71.14 141 7 HIS A 323 ? ? 61.08 154.74 142 7 GLU A 327 ? ? 162.30 136.17 143 8 MET A 6 ? ? -146.13 -72.89 144 8 VAL A 21 ? ? 66.21 82.28 145 8 LEU A 27 ? ? -55.56 -8.28 146 8 GLU A 43 ? ? -171.81 142.91 147 8 MET A 69 ? ? -153.58 55.09 148 8 GLN A 71 ? ? 47.64 -155.17 149 8 ARG A 102 ? ? 70.31 169.15 150 8 PHE A 103 ? ? 146.57 128.76 151 8 PRO A 121 ? ? -49.96 108.60 152 8 GLN A 125 ? ? 102.26 126.92 153 8 GLN A 138 ? ? 84.71 -157.00 154 8 ASP A 165 ? ? 76.26 144.26 155 8 ARG A 175 ? ? 83.51 89.32 156 8 SER A 178 ? ? -88.36 -105.65 157 8 ILE A 179 ? ? -68.77 20.41 158 8 ASP A 183 ? ? 84.97 -85.90 159 8 ILE A 185 ? ? 138.27 -65.01 160 8 LYS A 198 ? ? -101.89 -80.56 161 8 TYR A 230 ? ? 100.19 139.05 162 8 ALA A 319 ? ? 83.54 37.43 163 8 HIS A 323 ? ? 77.96 166.76 164 8 VAL A 328 ? ? 134.05 145.40 165 9 VAL A 21 ? ? -163.94 106.65 166 9 LEU A 27 ? ? -55.37 -8.48 167 9 MET A 69 ? ? -154.28 42.40 168 9 GLN A 71 ? ? 65.45 -147.20 169 9 LEU A 98 ? ? 23.65 -134.69 170 9 ARG A 102 ? ? 56.13 176.47 171 9 PHE A 103 ? ? 151.16 123.88 172 9 GLN A 125 ? ? 135.65 129.09 173 9 LYS A 131 ? ? -60.84 96.27 174 9 GLN A 138 ? ? 87.55 -144.21 175 9 ASP A 165 ? ? 75.33 132.64 176 9 ARG A 175 ? ? 91.25 98.18 177 9 SER A 178 ? ? -103.66 -92.75 178 9 ILE A 179 ? ? -68.77 17.23 179 9 LYS A 198 ? ? -120.23 -76.89 180 9 GLN A 211 ? ? 78.78 36.30 181 9 TYR A 230 ? ? 136.77 165.37 182 9 THR A 252 ? ? -27.67 -71.35 183 9 ALA A 319 ? ? 92.24 84.29 184 9 HIS A 323 ? ? 57.24 144.53 185 9 GLU A 327 ? ? 165.46 155.50 186 10 VAL A 21 ? ? 40.04 87.75 187 10 LEU A 27 ? ? -56.01 -8.25 188 10 MET A 69 ? ? -149.83 31.94 189 10 GLN A 71 ? ? 59.43 -146.89 190 10 LEU A 98 ? ? -4.97 108.11 191 10 GLN A 125 ? ? 132.89 142.83 192 10 GLN A 138 ? ? 79.26 -153.61 193 10 ASP A 165 ? ? 77.31 172.15 194 10 ARG A 175 ? ? 134.64 138.66 195 10 PHE A 176 ? ? 129.02 131.13 196 10 SER A 178 ? ? -90.77 -113.19 197 10 ILE A 179 ? ? -68.80 21.80 198 10 LYS A 198 ? ? -132.02 -72.86 199 10 GLN A 211 ? ? 82.29 23.67 200 10 TYR A 230 ? ? 99.30 150.54 201 10 ALA A 319 ? ? 90.58 54.26 202 10 HIS A 323 ? ? 63.71 150.43 203 10 GLU A 327 ? ? 140.00 146.76 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 ZN ZN ZN N N 388 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.49 # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 70601 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Pyrococcus horikoshii' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.ncbi_tax_id 562 _em_entity_assembly_recombinant.organism 'Escherichia coli' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 40 _em_image_recording.average_exposure_time 4 _em_image_recording.details ? _em_image_recording.detector_mode SUPER-RESOLUTION _em_image_recording.film_or_detector_model 'GATAN K2 SUMMIT (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images 90 # _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.details ? _em_particle_selection.method ? _em_particle_selection.num_particles_selected 30407 _em_particle_selection.reference_model ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' ? RELION 1.4 1 ? ? 2 'IMAGE ACQUISITION' ? Latitude 3 ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? CTFFIND 3 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? iMODFIT 1.44 ? 1 ? 8 OTHER ? ? ? ? ? ? 9 'INITIAL EULER ASSIGNMENT' ? RELION 1.4 1 ? ? 10 'FINAL EULER ASSIGNMENT' ? RELION 1.4 1 ? ? 11 CLASSIFICATION ? RELION 1.4 1 ? ? 12 RECONSTRUCTION ? RELION 1.4 1 ? ? 13 'MODEL REFINEMENT' ? X-PLOR 4.39 ? 1 ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration 1 _em_specimen.details 'This sample was monodisperse.' _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'European Research Council' ? 311318 1 'French National Research Agency' France ANR-10-INSB-05-02 2 'French National Research Agency' France ANR-10-LABX-49-01 3 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'gel filtration' ? 2 1 microscopy 'CryoEM, negative staining EM' #