data_6FEK # _entry.id 6FEK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.292 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6FEK WWPDB D_1200008122 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6FEK _pdbx_database_status.recvd_initial_deposition_date 2018-01-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'McDonald, N.Q.' 1 0000-0003-0975-6325 'Kohno, T.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 9 _citation.language ? _citation.page_first 625 _citation.page_last 625 _citation.title 'A secondary RET mutation in the activation loop conferring resistance to vandetanib.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-018-02994-7 _citation.pdbx_database_id_PubMed 29434222 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Nakaoku, T.' 1 primary 'Kohno, T.' 2 primary 'Araki, M.' 3 primary 'Niho, S.' 4 primary 'Chauhan, R.' 5 primary 'Knowles, P.P.' 6 primary 'Tsuchihara, K.' 7 primary 'Matsumoto, S.' 8 primary 'Shimada, Y.' 9 primary 'Mimaki, S.' 10 primary 'Ishii, G.' 11 primary 'Ichikawa, H.' 12 primary 'Nagatoishi, S.' 13 primary 'Tsumoto, K.' 14 primary 'Okuno, Y.' 15 primary 'Yoh, K.' 16 primary 'McDonald, N.Q.' 17 primary 'Goto, K.' 18 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6FEK _cell.details ? _cell.formula_units_Z ? _cell.length_a 50.901 _cell.length_a_esd ? _cell.length_b 50.901 _cell.length_b_esd ? _cell.length_c 242.515 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FEK _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Proto-oncogene tyrosine-protein kinase receptor Ret' 34305.684 1 2.7.10.1 S904F ? ? 2 non-polymer syn 'FORMIC ACID' 46.025 3 ? ? ? ? 3 non-polymer syn ADENOSINE 267.241 1 ? ? ? ? 4 water nat water 18.015 33 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Cadherin family member 12,Proto-oncogene c-Ret' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GPLSLSVDAFKILAAPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVL KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGPDERALTMGDLISFAWQISQGMQYLAEMKLVHRD LAARNILVAEGRKMKISDFGLSRDV(PTR)EEDF(PTR)VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT LGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKRR ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLSLSVDAFKILAAPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVL KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGPDERALTMGDLISFAWQISQGMQYLAEMKLVHRD LAARNILVAEGRKMKISDFGLSRDVYEEDFYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG IPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKRR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 SER n 1 5 LEU n 1 6 SER n 1 7 VAL n 1 8 ASP n 1 9 ALA n 1 10 PHE n 1 11 LYS n 1 12 ILE n 1 13 LEU n 1 14 ALA n 1 15 ALA n 1 16 PRO n 1 17 LYS n 1 18 TRP n 1 19 GLU n 1 20 PHE n 1 21 PRO n 1 22 ARG n 1 23 LYS n 1 24 ASN n 1 25 LEU n 1 26 VAL n 1 27 LEU n 1 28 GLY n 1 29 LYS n 1 30 THR n 1 31 LEU n 1 32 GLY n 1 33 GLU n 1 34 GLY n 1 35 GLU n 1 36 PHE n 1 37 GLY n 1 38 LYS n 1 39 VAL n 1 40 VAL n 1 41 LYS n 1 42 ALA n 1 43 THR n 1 44 ALA n 1 45 PHE n 1 46 HIS n 1 47 LEU n 1 48 LYS n 1 49 GLY n 1 50 ARG n 1 51 ALA n 1 52 GLY n 1 53 TYR n 1 54 THR n 1 55 THR n 1 56 VAL n 1 57 ALA n 1 58 VAL n 1 59 LYS n 1 60 MET n 1 61 LEU n 1 62 LYS n 1 63 GLU n 1 64 ASN n 1 65 ALA n 1 66 SER n 1 67 PRO n 1 68 SER n 1 69 GLU n 1 70 LEU n 1 71 ARG n 1 72 ASP n 1 73 LEU n 1 74 LEU n 1 75 SER n 1 76 GLU n 1 77 PHE n 1 78 ASN n 1 79 VAL n 1 80 LEU n 1 81 LYS n 1 82 GLN n 1 83 VAL n 1 84 ASN n 1 85 HIS n 1 86 PRO n 1 87 HIS n 1 88 VAL n 1 89 ILE n 1 90 LYS n 1 91 LEU n 1 92 TYR n 1 93 GLY n 1 94 ALA n 1 95 CYS n 1 96 SER n 1 97 GLN n 1 98 ASP n 1 99 GLY n 1 100 PRO n 1 101 LEU n 1 102 LEU n 1 103 LEU n 1 104 ILE n 1 105 VAL n 1 106 GLU n 1 107 TYR n 1 108 ALA n 1 109 LYS n 1 110 TYR n 1 111 GLY n 1 112 SER n 1 113 LEU n 1 114 ARG n 1 115 GLY n 1 116 PHE n 1 117 LEU n 1 118 ARG n 1 119 GLU n 1 120 SER n 1 121 ARG n 1 122 LYS n 1 123 VAL n 1 124 GLY n 1 125 PRO n 1 126 GLY n 1 127 PRO n 1 128 ASP n 1 129 GLU n 1 130 ARG n 1 131 ALA n 1 132 LEU n 1 133 THR n 1 134 MET n 1 135 GLY n 1 136 ASP n 1 137 LEU n 1 138 ILE n 1 139 SER n 1 140 PHE n 1 141 ALA n 1 142 TRP n 1 143 GLN n 1 144 ILE n 1 145 SER n 1 146 GLN n 1 147 GLY n 1 148 MET n 1 149 GLN n 1 150 TYR n 1 151 LEU n 1 152 ALA n 1 153 GLU n 1 154 MET n 1 155 LYS n 1 156 LEU n 1 157 VAL n 1 158 HIS n 1 159 ARG n 1 160 ASP n 1 161 LEU n 1 162 ALA n 1 163 ALA n 1 164 ARG n 1 165 ASN n 1 166 ILE n 1 167 LEU n 1 168 VAL n 1 169 ALA n 1 170 GLU n 1 171 GLY n 1 172 ARG n 1 173 LYS n 1 174 MET n 1 175 LYS n 1 176 ILE n 1 177 SER n 1 178 ASP n 1 179 PHE n 1 180 GLY n 1 181 LEU n 1 182 SER n 1 183 ARG n 1 184 ASP n 1 185 VAL n 1 186 PTR n 1 187 GLU n 1 188 GLU n 1 189 ASP n 1 190 PHE n 1 191 PTR n 1 192 VAL n 1 193 LYS n 1 194 ARG n 1 195 SER n 1 196 GLN n 1 197 GLY n 1 198 ARG n 1 199 ILE n 1 200 PRO n 1 201 VAL n 1 202 LYS n 1 203 TRP n 1 204 MET n 1 205 ALA n 1 206 ILE n 1 207 GLU n 1 208 SER n 1 209 LEU n 1 210 PHE n 1 211 ASP n 1 212 HIS n 1 213 ILE n 1 214 TYR n 1 215 THR n 1 216 THR n 1 217 GLN n 1 218 SER n 1 219 ASP n 1 220 VAL n 1 221 TRP n 1 222 SER n 1 223 PHE n 1 224 GLY n 1 225 VAL n 1 226 LEU n 1 227 LEU n 1 228 TRP n 1 229 GLU n 1 230 ILE n 1 231 VAL n 1 232 THR n 1 233 LEU n 1 234 GLY n 1 235 GLY n 1 236 ASN n 1 237 PRO n 1 238 TYR n 1 239 PRO n 1 240 GLY n 1 241 ILE n 1 242 PRO n 1 243 PRO n 1 244 GLU n 1 245 ARG n 1 246 LEU n 1 247 PHE n 1 248 ASN n 1 249 LEU n 1 250 LEU n 1 251 LYS n 1 252 THR n 1 253 GLY n 1 254 HIS n 1 255 ARG n 1 256 MET n 1 257 GLU n 1 258 ARG n 1 259 PRO n 1 260 ASP n 1 261 ASN n 1 262 CYS n 1 263 SER n 1 264 GLU n 1 265 GLU n 1 266 MET n 1 267 TYR n 1 268 ARG n 1 269 LEU n 1 270 MET n 1 271 LEU n 1 272 GLN n 1 273 CYS n 1 274 TRP n 1 275 LYS n 1 276 GLN n 1 277 GLU n 1 278 PRO n 1 279 ASP n 1 280 LYS n 1 281 ARG n 1 282 PRO n 1 283 VAL n 1 284 PHE n 1 285 ALA n 1 286 ASP n 1 287 ILE n 1 288 SER n 1 289 LYS n 1 290 ASP n 1 291 LEU n 1 292 GLU n 1 293 LYS n 1 294 MET n 1 295 MET n 1 296 VAL n 1 297 LYS n 1 298 ARG n 1 299 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 299 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'RET, CDHF12, CDHR16, PTC, RET51' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RET_HUMAN _struct_ref.pdbx_db_accession P07949 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNH PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQY LAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI VTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKRR ; _struct_ref.pdbx_align_begin 705 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6FEK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 299 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P07949 _struct_ref_seq.db_align_beg 705 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1013 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 705 _struct_ref_seq.pdbx_auth_seq_align_end 1013 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6FEK GLY A 1 ? UNP P07949 ? ? 'expression tag' 700 1 1 6FEK PRO A 2 ? UNP P07949 ? ? 'expression tag' 701 2 1 6FEK LEU A 3 ? UNP P07949 ? ? 'expression tag' 702 3 1 6FEK SER A 4 ? UNP P07949 ? ? 'expression tag' 703 4 1 6FEK LEU A 5 ? UNP P07949 ? ? 'expression tag' 704 5 1 6FEK ALA A 14 ? UNP P07949 GLU 713 conflict 713 6 1 6FEK ALA A 15 ? UNP P07949 ASP 714 conflict 714 7 1 6FEK ? A ? ? UNP P07949 TYR 826 deletion ? 8 1 6FEK ? A ? ? UNP P07949 LEU 827 deletion ? 9 1 6FEK ? A ? ? UNP P07949 GLY 828 deletion ? 10 1 6FEK ? A ? ? UNP P07949 SER 829 deletion ? 11 1 6FEK ? A ? ? UNP P07949 GLY 830 deletion ? 12 1 6FEK ? A ? ? UNP P07949 GLY 831 deletion ? 13 1 6FEK ? A ? ? UNP P07949 SER 832 deletion ? 14 1 6FEK ? A ? ? UNP P07949 ARG 833 deletion ? 15 1 6FEK ? A ? ? UNP P07949 ASN 834 deletion ? 16 1 6FEK ? A ? ? UNP P07949 SER 835 deletion ? 17 1 6FEK ? A ? ? UNP P07949 SER 836 deletion ? 18 1 6FEK ? A ? ? UNP P07949 SER 837 deletion ? 19 1 6FEK ? A ? ? UNP P07949 LEU 838 deletion ? 20 1 6FEK ? A ? ? UNP P07949 ASP 839 deletion ? 21 1 6FEK ? A ? ? UNP P07949 HIS 840 deletion ? 22 1 6FEK PHE A 190 ? UNP P07949 SER 904 'engineered mutation' 904 23 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ADN non-polymer . ADENOSINE ? 'C10 H13 N5 O4' 267.241 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FMT non-polymer . 'FORMIC ACID' ? 'C H2 O2' 46.025 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PTR 'L-peptide linking' n O-PHOSPHOTYROSINE PHOSPHONOTYROSINE 'C9 H12 N O6 P' 261.168 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6FEK _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.36 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 47.84 _exptl_crystal.description plates _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.4 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '3.4 M sodium formate, and 0.1 M sodium acetate pH 4.4' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-03-29 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_synchrotron_site SLS # _reflns.B_iso_Wilson_estimate 28.3 _reflns.entry_id 6FEK _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.08 _reflns.d_resolution_low 48.5 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 27003 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 24.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.8 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.046 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.08 _reflns_shell.d_res_low 2.19 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.0 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1364 _reflns_shell.percent_possible_all 97 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 25.5 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.340 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.641 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6FEK _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.300 _refine.ls_d_res_low 46.934 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 27002 _refine.ls_number_reflns_R_free 1364 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.83 _refine.ls_percent_reflns_R_free 5.05 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2029 _refine.ls_R_factor_R_free 0.2441 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2007 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.38 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 23.62 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.29 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2276 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 33 _refine_hist.number_atoms_total 2337 _refine_hist.d_res_high 2.300 _refine_hist.d_res_low 46.934 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.003 ? 2369 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.582 ? 3217 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 16.051 ? 1401 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.043 ? 356 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.003 ? 405 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.3000 2.3822 . . 139 2558 100.00 . . . 0.2870 . 0.2790 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3822 2.4776 . . 140 2591 100.00 . . . 0.3470 . 0.2681 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4776 2.5904 . . 137 2535 100.00 . . . 0.2767 . 0.2552 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5904 2.7269 . . 134 2566 100.00 . . . 0.2734 . 0.2486 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7269 2.8977 . . 131 2568 100.00 . . . 0.2823 . 0.2282 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8977 3.1214 . . 142 2571 100.00 . . . 0.2715 . 0.2383 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1214 3.4355 . . 133 2584 100.00 . . . 0.2469 . 0.2038 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4355 3.9324 . . 130 2542 99.00 . . . 0.2586 . 0.1847 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.9324 4.9535 . . 136 2559 100.00 . . . 0.1622 . 0.1491 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.9535 46.9433 . . 142 2564 100.00 . . . 0.2395 . 0.1769 . . . . . . . . . . # _struct.entry_id 6FEK _struct.title 'Oncogenic point mutation of RET receptor tyrosine kinase' _struct.pdbx_descriptor 'Proto-oncogene tyrosine-protein kinase receptor Ret (E.C.2.7.10.1)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6FEK _struct_keywords.text 'tyrosine kinase, oncogene, mutation, ONCOPROTEIN' _struct_keywords.pdbx_keywords ONCOPROTEIN # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 1 ? LEU A 13 ? GLY A 700 LEU A 712 1 ? 13 HELX_P HELX_P2 AA2 PRO A 21 ? LYS A 23 ? PRO A 720 LYS A 722 5 ? 3 HELX_P HELX_P3 AA3 SER A 66 ? LYS A 81 ? SER A 765 LYS A 780 1 ? 16 HELX_P HELX_P4 AA4 SER A 112 ? LYS A 122 ? SER A 811 LYS A 821 1 ? 11 HELX_P HELX_P5 AA5 THR A 133 ? MET A 154 ? THR A 847 MET A 868 1 ? 22 HELX_P HELX_P6 AA6 ALA A 162 ? ARG A 164 ? ALA A 876 ARG A 878 5 ? 3 HELX_P HELX_P7 AA7 PRO A 200 ? MET A 204 ? PRO A 914 MET A 918 5 ? 5 HELX_P HELX_P8 AA8 ALA A 205 ? HIS A 212 ? ALA A 919 HIS A 926 1 ? 8 HELX_P HELX_P9 AA9 THR A 215 ? THR A 232 ? THR A 929 THR A 946 1 ? 18 HELX_P HELX_P10 AB1 PRO A 242 ? GLU A 244 ? PRO A 956 GLU A 958 5 ? 3 HELX_P HELX_P11 AB2 ARG A 245 ? THR A 252 ? ARG A 959 THR A 966 1 ? 8 HELX_P HELX_P12 AB3 SER A 263 ? TRP A 274 ? SER A 977 TRP A 988 1 ? 12 HELX_P HELX_P13 AB4 GLU A 277 ? ARG A 281 ? GLU A 991 ARG A 995 5 ? 5 HELX_P HELX_P14 AB5 VAL A 283 ? MET A 294 ? VAL A 997 MET A 1008 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A VAL 185 C ? ? ? 1_555 A PTR 186 N ? ? A VAL 899 A PTR 900 1_555 ? ? ? ? ? ? ? 1.331 ? covale2 covale both ? A PTR 186 C ? ? ? 1_555 A GLU 187 N ? ? A PTR 900 A GLU 901 1_555 ? ? ? ? ? ? ? 1.328 ? covale3 covale both ? A PHE 190 C ? ? ? 1_555 A PTR 191 N ? ? A PHE 904 A PTR 905 1_555 ? ? ? ? ? ? ? 1.330 ? covale4 covale both ? A PTR 191 C ? ? ? 1_555 A VAL 192 N ? ? A PTR 905 A VAL 906 1_555 ? ? ? ? ? ? ? 1.328 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 2 ? AA3 ? 2 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 25 ? GLU A 33 ? LEU A 724 GLU A 732 AA1 2 GLY A 37 ? LEU A 47 ? GLY A 736 LEU A 746 AA1 3 ARG A 50 ? LEU A 61 ? ARG A 749 LEU A 760 AA1 4 LEU A 102 ? GLU A 106 ? LEU A 801 GLU A 805 AA1 5 LEU A 91 ? CYS A 95 ? LEU A 790 CYS A 794 AA2 1 LEU A 156 ? VAL A 157 ? LEU A 870 VAL A 871 AA2 2 ARG A 183 ? ASP A 184 ? ARG A 897 ASP A 898 AA3 1 ILE A 166 ? ALA A 169 ? ILE A 880 ALA A 883 AA3 2 LYS A 173 ? ILE A 176 ? LYS A 887 ILE A 890 AA4 1 PTR A 191 ? VAL A 192 ? PTR A 905 VAL A 906 AA4 2 ILE A 213 ? TYR A 214 ? ILE A 927 TYR A 928 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLY A 28 ? N GLY A 727 O LYS A 41 ? O LYS A 740 AA1 2 3 N ALA A 44 ? N ALA A 743 O THR A 54 ? O THR A 753 AA1 3 4 N ALA A 57 ? N ALA A 756 O VAL A 105 ? O VAL A 804 AA1 4 5 O ILE A 104 ? O ILE A 803 N GLY A 93 ? N GLY A 792 AA2 1 2 N VAL A 157 ? N VAL A 871 O ARG A 183 ? O ARG A 897 AA3 1 2 N LEU A 167 ? N LEU A 881 O LYS A 175 ? O LYS A 889 AA4 1 2 N PTR A 191 ? N PTR A 905 O TYR A 214 ? O TYR A 928 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A FMT 1101 ? 4 'binding site for residue FMT A 1101' AC2 Software A FMT 1102 ? 7 'binding site for residue FMT A 1102' AC3 Software A FMT 1103 ? 5 'binding site for residue FMT A 1103' AC4 Software A ADN 1104 ? 6 'binding site for residue ADN A 1104' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ARG A 159 ? ARG A 873 . ? 1_555 ? 2 AC1 4 LYS A 193 ? LYS A 907 . ? 1_555 ? 3 AC1 4 GLY A 197 ? GLY A 911 . ? 1_555 ? 4 AC1 4 ARG A 198 ? ARG A 912 . ? 1_555 ? 5 AC2 7 GLY A 1 ? GLY A 700 . ? 1_555 ? 6 AC2 7 PRO A 2 ? PRO A 701 . ? 1_555 ? 7 AC2 7 LEU A 3 ? LEU A 702 . ? 1_555 ? 8 AC2 7 SER A 4 ? SER A 703 . ? 1_555 ? 9 AC2 7 GLN A 196 ? GLN A 910 . ? 7_645 ? 10 AC2 7 LEU A 209 ? LEU A 923 . ? 7_645 ? 11 AC2 7 HIS A 212 ? HIS A 926 . ? 7_645 ? 12 AC3 5 ARG A 22 ? ARG A 721 . ? 1_555 ? 13 AC3 5 GLN A 97 ? GLN A 796 . ? 1_555 ? 14 AC3 5 GLY A 99 ? GLY A 798 . ? 1_555 ? 15 AC3 5 PRO A 100 ? PRO A 799 . ? 1_555 ? 16 AC3 5 LEU A 102 ? LEU A 801 . ? 1_555 ? 17 AC4 6 VAL A 39 ? VAL A 738 . ? 1_555 ? 18 AC4 6 ALA A 57 ? ALA A 756 . ? 1_555 ? 19 AC4 6 GLU A 106 ? GLU A 805 . ? 1_555 ? 20 AC4 6 ALA A 108 ? ALA A 807 . ? 1_555 ? 21 AC4 6 SER A 112 ? SER A 811 . ? 1_555 ? 22 AC4 6 LEU A 167 ? LEU A 881 . ? 1_555 ? # _atom_sites.entry_id 6FEK _atom_sites.fract_transf_matrix[1][1] 0.019646 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019646 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004123 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 700 700 GLY GLY A . n A 1 2 PRO 2 701 701 PRO PRO A . n A 1 3 LEU 3 702 702 LEU LEU A . n A 1 4 SER 4 703 703 SER SER A . n A 1 5 LEU 5 704 704 LEU LEU A . n A 1 6 SER 6 705 705 SER SER A . n A 1 7 VAL 7 706 706 VAL VAL A . n A 1 8 ASP 8 707 707 ASP ASP A . n A 1 9 ALA 9 708 708 ALA ALA A . n A 1 10 PHE 10 709 709 PHE PHE A . n A 1 11 LYS 11 710 710 LYS LYS A . n A 1 12 ILE 12 711 711 ILE ILE A . n A 1 13 LEU 13 712 712 LEU LEU A . n A 1 14 ALA 14 713 713 ALA ALA A . n A 1 15 ALA 15 714 714 ALA ALA A . n A 1 16 PRO 16 715 715 PRO PRO A . n A 1 17 LYS 17 716 716 LYS LYS A . n A 1 18 TRP 18 717 717 TRP TRP A . n A 1 19 GLU 19 718 718 GLU GLU A . n A 1 20 PHE 20 719 719 PHE PHE A . n A 1 21 PRO 21 720 720 PRO PRO A . n A 1 22 ARG 22 721 721 ARG ARG A . n A 1 23 LYS 23 722 722 LYS LYS A . n A 1 24 ASN 24 723 723 ASN ASN A . n A 1 25 LEU 25 724 724 LEU LEU A . n A 1 26 VAL 26 725 725 VAL VAL A . n A 1 27 LEU 27 726 726 LEU LEU A . n A 1 28 GLY 28 727 727 GLY GLY A . n A 1 29 LYS 29 728 728 LYS LYS A . n A 1 30 THR 30 729 729 THR THR A . n A 1 31 LEU 31 730 730 LEU LEU A . n A 1 32 GLY 32 731 731 GLY GLY A . n A 1 33 GLU 33 732 732 GLU GLU A . n A 1 34 GLY 34 733 733 GLY GLY A . n A 1 35 GLU 35 734 734 GLU GLU A . n A 1 36 PHE 36 735 735 PHE ALA A . n A 1 37 GLY 37 736 736 GLY GLY A . n A 1 38 LYS 38 737 737 LYS LYS A . n A 1 39 VAL 39 738 738 VAL VAL A . n A 1 40 VAL 40 739 739 VAL VAL A . n A 1 41 LYS 41 740 740 LYS LYS A . n A 1 42 ALA 42 741 741 ALA ALA A . n A 1 43 THR 43 742 742 THR THR A . n A 1 44 ALA 44 743 743 ALA ALA A . n A 1 45 PHE 45 744 744 PHE PHE A . n A 1 46 HIS 46 745 745 HIS HIS A . n A 1 47 LEU 47 746 746 LEU LEU A . n A 1 48 LYS 48 747 747 LYS LYS A . n A 1 49 GLY 49 748 748 GLY GLY A . n A 1 50 ARG 50 749 749 ARG ARG A . n A 1 51 ALA 51 750 750 ALA ALA A . n A 1 52 GLY 52 751 751 GLY GLY A . n A 1 53 TYR 53 752 752 TYR TYR A . n A 1 54 THR 54 753 753 THR THR A . n A 1 55 THR 55 754 754 THR THR A . n A 1 56 VAL 56 755 755 VAL VAL A . n A 1 57 ALA 57 756 756 ALA ALA A . n A 1 58 VAL 58 757 757 VAL VAL A . n A 1 59 LYS 59 758 758 LYS LYS A . n A 1 60 MET 60 759 759 MET MET A . n A 1 61 LEU 61 760 760 LEU LEU A . n A 1 62 LYS 62 761 761 LYS LYS A . n A 1 63 GLU 63 762 762 GLU GLU A . n A 1 64 ASN 64 763 763 ASN ASN A . n A 1 65 ALA 65 764 764 ALA ALA A . n A 1 66 SER 66 765 765 SER SER A . n A 1 67 PRO 67 766 766 PRO PRO A . n A 1 68 SER 68 767 767 SER SER A . n A 1 69 GLU 69 768 768 GLU GLU A . n A 1 70 LEU 70 769 769 LEU LEU A . n A 1 71 ARG 71 770 770 ARG ARG A . n A 1 72 ASP 72 771 771 ASP ASP A . n A 1 73 LEU 73 772 772 LEU LEU A . n A 1 74 LEU 74 773 773 LEU LEU A . n A 1 75 SER 75 774 774 SER SER A . n A 1 76 GLU 76 775 775 GLU GLU A . n A 1 77 PHE 77 776 776 PHE PHE A . n A 1 78 ASN 78 777 777 ASN ASN A . n A 1 79 VAL 79 778 778 VAL VAL A . n A 1 80 LEU 80 779 779 LEU LEU A . n A 1 81 LYS 81 780 780 LYS LYS A . n A 1 82 GLN 82 781 781 GLN GLN A . n A 1 83 VAL 83 782 782 VAL VAL A . n A 1 84 ASN 84 783 783 ASN ASN A . n A 1 85 HIS 85 784 784 HIS HIS A . n A 1 86 PRO 86 785 785 PRO PRO A . n A 1 87 HIS 87 786 786 HIS HIS A . n A 1 88 VAL 88 787 787 VAL VAL A . n A 1 89 ILE 89 788 788 ILE ILE A . n A 1 90 LYS 90 789 789 LYS LYS A . n A 1 91 LEU 91 790 790 LEU LEU A . n A 1 92 TYR 92 791 791 TYR TYR A . n A 1 93 GLY 93 792 792 GLY GLY A . n A 1 94 ALA 94 793 793 ALA ALA A . n A 1 95 CYS 95 794 794 CYS CYS A . n A 1 96 SER 96 795 795 SER SER A . n A 1 97 GLN 97 796 796 GLN GLN A . n A 1 98 ASP 98 797 797 ASP ASP A . n A 1 99 GLY 99 798 798 GLY GLY A . n A 1 100 PRO 100 799 799 PRO PRO A . n A 1 101 LEU 101 800 800 LEU LEU A . n A 1 102 LEU 102 801 801 LEU LEU A . n A 1 103 LEU 103 802 802 LEU LEU A . n A 1 104 ILE 104 803 803 ILE ILE A . n A 1 105 VAL 105 804 804 VAL VAL A . n A 1 106 GLU 106 805 805 GLU GLU A . n A 1 107 TYR 107 806 806 TYR TYR A . n A 1 108 ALA 108 807 807 ALA ALA A . n A 1 109 LYS 109 808 808 LYS LYS A . n A 1 110 TYR 110 809 809 TYR TYR A . n A 1 111 GLY 111 810 810 GLY GLY A . n A 1 112 SER 112 811 811 SER SER A . n A 1 113 LEU 113 812 812 LEU LEU A . n A 1 114 ARG 114 813 813 ARG ARG A . n A 1 115 GLY 115 814 814 GLY GLY A . n A 1 116 PHE 116 815 815 PHE PHE A . n A 1 117 LEU 117 816 816 LEU LEU A . n A 1 118 ARG 118 817 817 ARG ARG A . n A 1 119 GLU 119 818 818 GLU GLU A . n A 1 120 SER 120 819 819 SER SER A . n A 1 121 ARG 121 820 820 ARG ARG A . n A 1 122 LYS 122 821 821 LYS LYS A . n A 1 123 VAL 123 822 822 VAL VAL A . n A 1 124 GLY 124 823 823 GLY GLY A . n A 1 125 PRO 125 824 824 PRO PRO A . n A 1 126 GLY 126 825 825 GLY GLY A . n A 1 127 PRO 127 841 841 PRO PRO A . n A 1 128 ASP 128 842 842 ASP ASP A . n A 1 129 GLU 129 843 843 GLU GLU A . n A 1 130 ARG 130 844 844 ARG ARG A . n A 1 131 ALA 131 845 845 ALA ALA A . n A 1 132 LEU 132 846 846 LEU LEU A . n A 1 133 THR 133 847 847 THR THR A . n A 1 134 MET 134 848 848 MET MET A . n A 1 135 GLY 135 849 849 GLY GLY A . n A 1 136 ASP 136 850 850 ASP ASP A . n A 1 137 LEU 137 851 851 LEU LEU A . n A 1 138 ILE 138 852 852 ILE ILE A . n A 1 139 SER 139 853 853 SER SER A . n A 1 140 PHE 140 854 854 PHE PHE A . n A 1 141 ALA 141 855 855 ALA ALA A . n A 1 142 TRP 142 856 856 TRP TRP A . n A 1 143 GLN 143 857 857 GLN GLN A . n A 1 144 ILE 144 858 858 ILE ILE A . n A 1 145 SER 145 859 859 SER SER A . n A 1 146 GLN 146 860 860 GLN GLN A . n A 1 147 GLY 147 861 861 GLY GLY A . n A 1 148 MET 148 862 862 MET MET A . n A 1 149 GLN 149 863 863 GLN GLN A . n A 1 150 TYR 150 864 864 TYR TYR A . n A 1 151 LEU 151 865 865 LEU LEU A . n A 1 152 ALA 152 866 866 ALA ALA A . n A 1 153 GLU 153 867 867 GLU GLU A . n A 1 154 MET 154 868 868 MET MET A . n A 1 155 LYS 155 869 869 LYS LYS A . n A 1 156 LEU 156 870 870 LEU LEU A . n A 1 157 VAL 157 871 871 VAL VAL A . n A 1 158 HIS 158 872 872 HIS HIS A . n A 1 159 ARG 159 873 873 ARG ARG A . n A 1 160 ASP 160 874 874 ASP ASP A . n A 1 161 LEU 161 875 875 LEU LEU A . n A 1 162 ALA 162 876 876 ALA ALA A . n A 1 163 ALA 163 877 877 ALA ALA A . n A 1 164 ARG 164 878 878 ARG ALA A . n A 1 165 ASN 165 879 879 ASN ASN A . n A 1 166 ILE 166 880 880 ILE ILE A . n A 1 167 LEU 167 881 881 LEU LEU A . n A 1 168 VAL 168 882 882 VAL VAL A . n A 1 169 ALA 169 883 883 ALA ALA A . n A 1 170 GLU 170 884 884 GLU GLU A . n A 1 171 GLY 171 885 885 GLY GLY A . n A 1 172 ARG 172 886 886 ARG ARG A . n A 1 173 LYS 173 887 887 LYS LYS A . n A 1 174 MET 174 888 888 MET MET A . n A 1 175 LYS 175 889 889 LYS LYS A . n A 1 176 ILE 176 890 890 ILE ILE A . n A 1 177 SER 177 891 891 SER SER A . n A 1 178 ASP 178 892 892 ASP ASP A . n A 1 179 PHE 179 893 893 PHE PHE A . n A 1 180 GLY 180 894 894 GLY GLY A . n A 1 181 LEU 181 895 895 LEU LEU A . n A 1 182 SER 182 896 896 SER SER A . n A 1 183 ARG 183 897 897 ARG ARG A . n A 1 184 ASP 184 898 898 ASP ASP A . n A 1 185 VAL 185 899 899 VAL VAL A . n A 1 186 PTR 186 900 900 PTR PTR A . n A 1 187 GLU 187 901 901 GLU GLU A . n A 1 188 GLU 188 902 902 GLU GLU A . n A 1 189 ASP 189 903 903 ASP ASP A . n A 1 190 PHE 190 904 904 PHE PHE A . n A 1 191 PTR 191 905 905 PTR PTR A . n A 1 192 VAL 192 906 906 VAL VAL A . n A 1 193 LYS 193 907 907 LYS LYS A . n A 1 194 ARG 194 908 908 ARG ARG A . n A 1 195 SER 195 909 909 SER SER A . n A 1 196 GLN 196 910 910 GLN GLN A . n A 1 197 GLY 197 911 911 GLY GLY A . n A 1 198 ARG 198 912 912 ARG ARG A . n A 1 199 ILE 199 913 913 ILE ILE A . n A 1 200 PRO 200 914 914 PRO PRO A . n A 1 201 VAL 201 915 915 VAL VAL A . n A 1 202 LYS 202 916 916 LYS LYS A . n A 1 203 TRP 203 917 917 TRP TRP A . n A 1 204 MET 204 918 918 MET MET A . n A 1 205 ALA 205 919 919 ALA ALA A . n A 1 206 ILE 206 920 920 ILE ILE A . n A 1 207 GLU 207 921 921 GLU GLU A . n A 1 208 SER 208 922 922 SER SER A . n A 1 209 LEU 209 923 923 LEU LEU A . n A 1 210 PHE 210 924 924 PHE PHE A . n A 1 211 ASP 211 925 925 ASP ASP A . n A 1 212 HIS 212 926 926 HIS HIS A . n A 1 213 ILE 213 927 927 ILE ILE A . n A 1 214 TYR 214 928 928 TYR TYR A . n A 1 215 THR 215 929 929 THR THR A . n A 1 216 THR 216 930 930 THR THR A . n A 1 217 GLN 217 931 931 GLN GLN A . n A 1 218 SER 218 932 932 SER SER A . n A 1 219 ASP 219 933 933 ASP ASP A . n A 1 220 VAL 220 934 934 VAL VAL A . n A 1 221 TRP 221 935 935 TRP TRP A . n A 1 222 SER 222 936 936 SER SER A . n A 1 223 PHE 223 937 937 PHE PHE A . n A 1 224 GLY 224 938 938 GLY GLY A . n A 1 225 VAL 225 939 939 VAL VAL A . n A 1 226 LEU 226 940 940 LEU LEU A . n A 1 227 LEU 227 941 941 LEU LEU A . n A 1 228 TRP 228 942 942 TRP TRP A . n A 1 229 GLU 229 943 943 GLU GLU A . n A 1 230 ILE 230 944 944 ILE ILE A . n A 1 231 VAL 231 945 945 VAL VAL A . n A 1 232 THR 232 946 946 THR THR A . n A 1 233 LEU 233 947 947 LEU LEU A . n A 1 234 GLY 234 948 948 GLY GLY A . n A 1 235 GLY 235 949 949 GLY GLY A . n A 1 236 ASN 236 950 950 ASN ASN A . n A 1 237 PRO 237 951 951 PRO PRO A . n A 1 238 TYR 238 952 952 TYR TYR A . n A 1 239 PRO 239 953 953 PRO PRO A . n A 1 240 GLY 240 954 954 GLY GLY A . n A 1 241 ILE 241 955 955 ILE ILE A . n A 1 242 PRO 242 956 956 PRO PRO A . n A 1 243 PRO 243 957 957 PRO PRO A . n A 1 244 GLU 244 958 958 GLU GLU A . n A 1 245 ARG 245 959 959 ARG ARG A . n A 1 246 LEU 246 960 960 LEU LEU A . n A 1 247 PHE 247 961 961 PHE PHE A . n A 1 248 ASN 248 962 962 ASN ASN A . n A 1 249 LEU 249 963 963 LEU LEU A . n A 1 250 LEU 250 964 964 LEU LEU A . n A 1 251 LYS 251 965 965 LYS LYS A . n A 1 252 THR 252 966 966 THR THR A . n A 1 253 GLY 253 967 967 GLY GLY A . n A 1 254 HIS 254 968 968 HIS HIS A . n A 1 255 ARG 255 969 969 ARG ARG A . n A 1 256 MET 256 970 970 MET MET A . n A 1 257 GLU 257 971 971 GLU GLU A . n A 1 258 ARG 258 972 972 ARG ARG A . n A 1 259 PRO 259 973 973 PRO PRO A . n A 1 260 ASP 260 974 974 ASP ASP A . n A 1 261 ASN 261 975 975 ASN ASN A . n A 1 262 CYS 262 976 976 CYS CYS A . n A 1 263 SER 263 977 977 SER SER A . n A 1 264 GLU 264 978 978 GLU GLU A . n A 1 265 GLU 265 979 979 GLU ALA A . n A 1 266 MET 266 980 980 MET MET A . n A 1 267 TYR 267 981 981 TYR TYR A . n A 1 268 ARG 268 982 982 ARG ARG A . n A 1 269 LEU 269 983 983 LEU LEU A . n A 1 270 MET 270 984 984 MET MET A . n A 1 271 LEU 271 985 985 LEU LEU A . n A 1 272 GLN 272 986 986 GLN GLN A . n A 1 273 CYS 273 987 987 CYS CYS A . n A 1 274 TRP 274 988 988 TRP TRP A . n A 1 275 LYS 275 989 989 LYS LYS A . n A 1 276 GLN 276 990 990 GLN GLN A . n A 1 277 GLU 277 991 991 GLU GLU A . n A 1 278 PRO 278 992 992 PRO PRO A . n A 1 279 ASP 279 993 993 ASP ASP A . n A 1 280 LYS 280 994 994 LYS LYS A . n A 1 281 ARG 281 995 995 ARG ARG A . n A 1 282 PRO 282 996 996 PRO PRO A . n A 1 283 VAL 283 997 997 VAL VAL A . n A 1 284 PHE 284 998 998 PHE PHE A . n A 1 285 ALA 285 999 999 ALA ALA A . n A 1 286 ASP 286 1000 1000 ASP ASP A . n A 1 287 ILE 287 1001 1001 ILE ILE A . n A 1 288 SER 288 1002 1002 SER SER A . n A 1 289 LYS 289 1003 1003 LYS LYS A . n A 1 290 ASP 290 1004 1004 ASP ASP A . n A 1 291 LEU 291 1005 1005 LEU LEU A . n A 1 292 GLU 292 1006 1006 GLU GLU A . n A 1 293 LYS 293 1007 1007 LYS LYS A . n A 1 294 MET 294 1008 1008 MET MET A . n A 1 295 MET 295 1009 1009 MET MET A . n A 1 296 VAL 296 1010 1010 VAL VAL A . n A 1 297 LYS 297 1011 ? ? ? A . n A 1 298 ARG 298 1012 ? ? ? A . n A 1 299 ARG 299 1013 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMT 1 1101 2 FMT FMT A . C 2 FMT 1 1102 3 FMT FMT A . D 2 FMT 1 1103 4 FMT FMT A . E 3 ADN 1 1104 1 ADN ADN A . F 4 HOH 1 1201 13 HOH HOH A . F 4 HOH 2 1202 8 HOH HOH A . F 4 HOH 3 1203 9 HOH HOH A . F 4 HOH 4 1204 39 HOH HOH A . F 4 HOH 5 1205 37 HOH HOH A . F 4 HOH 6 1206 23 HOH HOH A . F 4 HOH 7 1207 19 HOH HOH A . F 4 HOH 8 1208 14 HOH HOH A . F 4 HOH 9 1209 15 HOH HOH A . F 4 HOH 10 1210 11 HOH HOH A . F 4 HOH 11 1211 38 HOH HOH A . F 4 HOH 12 1212 35 HOH HOH A . F 4 HOH 13 1213 33 HOH HOH A . F 4 HOH 14 1214 31 HOH HOH A . F 4 HOH 15 1215 6 HOH HOH A . F 4 HOH 16 1216 26 HOH HOH A . F 4 HOH 17 1217 21 HOH HOH A . F 4 HOH 18 1218 41 HOH HOH A . F 4 HOH 19 1219 24 HOH HOH A . F 4 HOH 20 1220 16 HOH HOH A . F 4 HOH 21 1221 43 HOH HOH A . F 4 HOH 22 1222 27 HOH HOH A . F 4 HOH 23 1223 1 HOH HOH A . F 4 HOH 24 1224 36 HOH HOH A . F 4 HOH 25 1225 40 HOH HOH A . F 4 HOH 26 1226 12 HOH HOH A . F 4 HOH 27 1227 22 HOH HOH A . F 4 HOH 28 1228 20 HOH HOH A . F 4 HOH 29 1229 3 HOH HOH A . F 4 HOH 30 1230 32 HOH HOH A . F 4 HOH 31 1231 7 HOH HOH A . F 4 HOH 32 1232 34 HOH HOH A . F 4 HOH 33 1233 42 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A PTR 186 A PTR 900 ? TYR 'modified residue' 2 A PTR 191 A PTR 905 ? TYR 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1010 ? 1 MORE 3 ? 1 'SSA (A^2)' 14350 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-02-28 2 'Structure model' 1 1 2018-05-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' reflns 2 2 'Structure model' reflns_shell # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_reflns.pdbx_Rpim_I_all' 2 2 'Structure model' '_reflns_shell.pdbx_Rpim_I_all' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.11.1_2575: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 713 ? ? -96.77 -60.73 2 1 ALA A 714 ? ? 61.02 65.37 3 1 PHE A 735 ? ? 78.44 -44.39 4 1 GLU A 843 ? ? -162.92 99.36 5 1 ARG A 873 ? ? 73.86 -24.59 6 1 ASP A 892 ? ? 59.54 71.43 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 710 ? CG ? A LYS 11 CG 2 1 Y 1 A LYS 710 ? CD ? A LYS 11 CD 3 1 Y 1 A LYS 710 ? CE ? A LYS 11 CE 4 1 Y 1 A LYS 710 ? NZ ? A LYS 11 NZ 5 1 Y 1 A ILE 711 ? CG1 ? A ILE 12 CG1 6 1 Y 1 A ILE 711 ? CG2 ? A ILE 12 CG2 7 1 Y 1 A ILE 711 ? CD1 ? A ILE 12 CD1 8 1 Y 1 A LYS 716 ? CG ? A LYS 17 CG 9 1 Y 1 A LYS 716 ? CD ? A LYS 17 CD 10 1 Y 1 A LYS 716 ? CE ? A LYS 17 CE 11 1 Y 1 A LYS 716 ? NZ ? A LYS 17 NZ 12 1 Y 1 A LYS 722 ? CG ? A LYS 23 CG 13 1 Y 1 A LYS 722 ? CD ? A LYS 23 CD 14 1 Y 1 A LYS 722 ? CE ? A LYS 23 CE 15 1 Y 1 A LYS 722 ? NZ ? A LYS 23 NZ 16 1 Y 1 A GLU 732 ? CD ? A GLU 33 CD 17 1 Y 1 A GLU 732 ? OE1 ? A GLU 33 OE1 18 1 Y 1 A GLU 732 ? OE2 ? A GLU 33 OE2 19 1 Y 1 A GLU 734 ? CG ? A GLU 35 CG 20 1 Y 1 A GLU 734 ? CD ? A GLU 35 CD 21 1 Y 1 A GLU 734 ? OE1 ? A GLU 35 OE1 22 1 Y 1 A GLU 734 ? OE2 ? A GLU 35 OE2 23 1 Y 1 A PHE 735 ? CG ? A PHE 36 CG 24 1 Y 1 A PHE 735 ? CD1 ? A PHE 36 CD1 25 1 Y 1 A PHE 735 ? CD2 ? A PHE 36 CD2 26 1 Y 1 A PHE 735 ? CE1 ? A PHE 36 CE1 27 1 Y 1 A PHE 735 ? CE2 ? A PHE 36 CE2 28 1 Y 1 A PHE 735 ? CZ ? A PHE 36 CZ 29 1 Y 1 A LYS 747 ? CG ? A LYS 48 CG 30 1 Y 1 A LYS 747 ? CD ? A LYS 48 CD 31 1 Y 1 A LYS 747 ? CE ? A LYS 48 CE 32 1 Y 1 A LYS 747 ? NZ ? A LYS 48 NZ 33 1 Y 1 A ARG 749 ? CG ? A ARG 50 CG 34 1 Y 1 A ARG 749 ? CD ? A ARG 50 CD 35 1 Y 1 A ARG 749 ? NE ? A ARG 50 NE 36 1 Y 1 A ARG 749 ? CZ ? A ARG 50 CZ 37 1 Y 1 A ARG 749 ? NH1 ? A ARG 50 NH1 38 1 Y 1 A ARG 749 ? NH2 ? A ARG 50 NH2 39 1 Y 1 A LYS 758 ? NZ ? A LYS 59 NZ 40 1 Y 1 A LYS 761 ? CG ? A LYS 62 CG 41 1 Y 1 A LYS 761 ? CD ? A LYS 62 CD 42 1 Y 1 A LYS 761 ? CE ? A LYS 62 CE 43 1 Y 1 A LYS 761 ? NZ ? A LYS 62 NZ 44 1 Y 1 A GLU 762 ? CG ? A GLU 63 CG 45 1 Y 1 A GLU 762 ? CD ? A GLU 63 CD 46 1 Y 1 A GLU 762 ? OE1 ? A GLU 63 OE1 47 1 Y 1 A GLU 762 ? OE2 ? A GLU 63 OE2 48 1 Y 1 A ASP 797 ? CG ? A ASP 98 CG 49 1 Y 1 A ASP 797 ? OD1 ? A ASP 98 OD1 50 1 Y 1 A ASP 797 ? OD2 ? A ASP 98 OD2 51 1 Y 1 A GLU 818 ? CG ? A GLU 119 CG 52 1 Y 1 A GLU 818 ? CD ? A GLU 119 CD 53 1 Y 1 A GLU 818 ? OE1 ? A GLU 119 OE1 54 1 Y 1 A GLU 818 ? OE2 ? A GLU 119 OE2 55 1 Y 1 A LYS 821 ? CD ? A LYS 122 CD 56 1 Y 1 A LYS 821 ? CE ? A LYS 122 CE 57 1 Y 1 A LYS 821 ? NZ ? A LYS 122 NZ 58 1 Y 1 A ASP 842 ? CG ? A ASP 128 CG 59 1 Y 1 A ASP 842 ? OD1 ? A ASP 128 OD1 60 1 Y 1 A ASP 842 ? OD2 ? A ASP 128 OD2 61 1 Y 1 A GLU 867 ? CD ? A GLU 153 CD 62 1 Y 1 A GLU 867 ? OE1 ? A GLU 153 OE1 63 1 Y 1 A GLU 867 ? OE2 ? A GLU 153 OE2 64 1 Y 1 A LYS 869 ? NZ ? A LYS 155 NZ 65 1 Y 1 A ARG 878 ? CG ? A ARG 164 CG 66 1 Y 1 A ARG 878 ? CD ? A ARG 164 CD 67 1 Y 1 A ARG 878 ? NE ? A ARG 164 NE 68 1 Y 1 A ARG 878 ? CZ ? A ARG 164 CZ 69 1 Y 1 A ARG 878 ? NH1 ? A ARG 164 NH1 70 1 Y 1 A ARG 878 ? NH2 ? A ARG 164 NH2 71 1 Y 1 A GLU 884 ? OE1 ? A GLU 170 OE1 72 1 Y 1 A GLU 884 ? OE2 ? A GLU 170 OE2 73 1 Y 1 A ASP 892 ? CG ? A ASP 178 CG 74 1 Y 1 A ASP 892 ? OD1 ? A ASP 178 OD1 75 1 Y 1 A ASP 892 ? OD2 ? A ASP 178 OD2 76 1 Y 1 A GLU 901 ? CD ? A GLU 187 CD 77 1 Y 1 A GLU 901 ? OE1 ? A GLU 187 OE1 78 1 Y 1 A GLU 901 ? OE2 ? A GLU 187 OE2 79 1 Y 1 A ARG 959 ? NE ? A ARG 245 NE 80 1 Y 1 A ARG 959 ? CZ ? A ARG 245 CZ 81 1 Y 1 A ARG 959 ? NH1 ? A ARG 245 NH1 82 1 Y 1 A ARG 959 ? NH2 ? A ARG 245 NH2 83 1 Y 1 A LYS 965 ? CE ? A LYS 251 CE 84 1 Y 1 A LYS 965 ? NZ ? A LYS 251 NZ 85 1 Y 1 A GLU 978 ? CG ? A GLU 264 CG 86 1 Y 1 A GLU 978 ? CD ? A GLU 264 CD 87 1 Y 1 A GLU 978 ? OE1 ? A GLU 264 OE1 88 1 Y 1 A GLU 978 ? OE2 ? A GLU 264 OE2 89 1 Y 1 A GLU 979 ? CG ? A GLU 265 CG 90 1 Y 1 A GLU 979 ? CD ? A GLU 265 CD 91 1 Y 1 A GLU 979 ? OE1 ? A GLU 265 OE1 92 1 Y 1 A GLU 979 ? OE2 ? A GLU 265 OE2 93 1 Y 1 A LYS 989 ? CE ? A LYS 275 CE 94 1 Y 1 A LYS 989 ? NZ ? A LYS 275 NZ 95 1 Y 1 A LYS 994 ? CE ? A LYS 280 CE 96 1 Y 1 A LYS 994 ? NZ ? A LYS 280 NZ 97 1 Y 1 A LYS 1003 ? CE ? A LYS 289 CE 98 1 Y 1 A LYS 1003 ? NZ ? A LYS 289 NZ 99 1 Y 1 A LYS 1007 ? CE ? A LYS 293 CE 100 1 Y 1 A LYS 1007 ? NZ ? A LYS 293 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 1011 ? A LYS 297 2 1 Y 1 A ARG 1012 ? A ARG 298 3 1 Y 1 A ARG 1013 ? A ARG 299 # _pdbx_audit_support.funding_organization 'Francis Crick Institute' _pdbx_audit_support.country 'United Kingdom' _pdbx_audit_support.grant_number FC001115 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FORMIC ACID' FMT 3 ADENOSINE ADN 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #