data_6GDJ # _entry.id 6GDJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.307 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6GDJ WWPDB D_1200009647 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6GDJ _pdbx_database_status.recvd_initial_deposition_date 2018-04-23 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Thakur, H.C.' 1 0000-0001-6996-2046 'Sawin, K.E.' 2 0000-0002-2607-2219 'Cook, A.G.' 3 0000-0003-2087-9772 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal structure of Mto2 twin-cysteine dimerisation domain' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Thakur, H.C.' 1 ? primary 'Sawin, K.E.' 2 ? primary 'Cook, A.G.' 3 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 6GDJ _cell.details ? _cell.formula_units_Z ? _cell.length_a 73.704 _cell.length_a_esd ? _cell.length_b 73.704 _cell.length_b_esd ? _cell.length_c 54.363 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GDJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Mto2 9381.744 2 ? ? 'twin-cysteine dimerisation domain' ? 2 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 3 water nat water 18.015 56 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GGPAPLSTMQTALMRLRTYHPSPIILKPVEQAVNHAITLVNTSPSSVVDALCRSLAELCLGLVQEAIDASILSQQESSNS LDLVRHTP ; _entity_poly.pdbx_seq_one_letter_code_can ;GGPAPLSTMQTALMRLRTYHPSPIILKPVEQAVNHAITLVNTSPSSVVDALCRSLAELCLGLVQEAIDASILSQQESSNS LDLVRHTP ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 GLY n 1 3 PRO n 1 4 ALA n 1 5 PRO n 1 6 LEU n 1 7 SER n 1 8 THR n 1 9 MET n 1 10 GLN n 1 11 THR n 1 12 ALA n 1 13 LEU n 1 14 MET n 1 15 ARG n 1 16 LEU n 1 17 ARG n 1 18 THR n 1 19 TYR n 1 20 HIS n 1 21 PRO n 1 22 SER n 1 23 PRO n 1 24 ILE n 1 25 ILE n 1 26 LEU n 1 27 LYS n 1 28 PRO n 1 29 VAL n 1 30 GLU n 1 31 GLN n 1 32 ALA n 1 33 VAL n 1 34 ASN n 1 35 HIS n 1 36 ALA n 1 37 ILE n 1 38 THR n 1 39 LEU n 1 40 VAL n 1 41 ASN n 1 42 THR n 1 43 SER n 1 44 PRO n 1 45 SER n 1 46 SER n 1 47 VAL n 1 48 VAL n 1 49 ASP n 1 50 ALA n 1 51 LEU n 1 52 CYS n 1 53 ARG n 1 54 SER n 1 55 LEU n 1 56 ALA n 1 57 GLU n 1 58 LEU n 1 59 CYS n 1 60 LEU n 1 61 GLY n 1 62 LEU n 1 63 VAL n 1 64 GLN n 1 65 GLU n 1 66 ALA n 1 67 ILE n 1 68 ASP n 1 69 ALA n 1 70 SER n 1 71 ILE n 1 72 LEU n 1 73 SER n 1 74 GLN n 1 75 GLN n 1 76 GLU n 1 77 SER n 1 78 SER n 1 79 ASN n 1 80 SER n 1 81 LEU n 1 82 ASP n 1 83 LEU n 1 84 VAL n 1 85 ARG n 1 86 HIS n 1 87 THR n 1 88 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 88 _entity_src_gen.gene_src_common_name 'fission yeast' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene SPBC902.06 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain '972 / ATCC 24843' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Schizosaccharomyces pombe' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4896 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant RILP _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGGWA _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code YHP6_SCHPO _struct_ref.pdbx_db_accession Q9USP7 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PAPLSTMQTALMRLRTYHPSPIILKPVEQAVNHAITLVNTSPSSVVDALCRSLAELCLGLVQEAIDASILSQQESSNSLD LVRHTP ; _struct_ref.pdbx_align_begin 180 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6GDJ A 3 ? 88 ? Q9USP7 180 ? 265 ? 180 265 2 1 6GDJ B 3 ? 88 ? Q9USP7 180 ? 265 ? 180 265 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6GDJ GLY A 1 ? UNP Q9USP7 ? ? 'expression tag' 178 1 1 6GDJ GLY A 2 ? UNP Q9USP7 ? ? 'expression tag' 179 2 2 6GDJ GLY B 1 ? UNP Q9USP7 ? ? 'expression tag' 178 3 2 6GDJ GLY B 2 ? UNP Q9USP7 ? ? 'expression tag' 179 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6GDJ _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.27 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 45.86 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 290 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '10-22% PEG 3350, 0.2M sodium acetate trihydrate or sodium thiocyanate pH6-7' _exptl_crystal_grow.pdbx_pH_range 6-7 # loop_ _diffrn.ambient_environment _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.ambient_temp_esd _diffrn.crystal_id _diffrn.crystal_support _diffrn.crystal_treatment _diffrn.details _diffrn.id _diffrn.ambient_pressure _diffrn.ambient_pressure_esd _diffrn.ambient_pressure_gt _diffrn.ambient_pressure_lt _diffrn.ambient_temp_gt _diffrn.ambient_temp_lt ? 100 ? ? 1 ? ? ? 1 ? ? ? ? ? ? ? 100 ? ? 1 ? ? ? 2 ? ? ? ? ? ? # loop_ _diffrn_detector.details _diffrn_detector.detector _diffrn_detector.diffrn_id _diffrn_detector.type _diffrn_detector.area_resol_mean _diffrn_detector.dtime _diffrn_detector.pdbx_frames_total _diffrn_detector.pdbx_collection_time_total _diffrn_detector.pdbx_collection_date ? PIXEL 1 'DECTRIS PILATUS 6M-F' ? ? ? ? 2014-10-08 ? PIXEL 2 'DECTRIS PILATUS3 S 6M' ? ? ? ? 2015-02-07 # loop_ _diffrn_radiation.collimation _diffrn_radiation.diffrn_id _diffrn_radiation.filter_edge _diffrn_radiation.inhomogeneity _diffrn_radiation.monochromator _diffrn_radiation.polarisn_norm _diffrn_radiation.polarisn_ratio _diffrn_radiation.probe _diffrn_radiation.type _diffrn_radiation.xray_symbol _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.pdbx_wavelength_list _diffrn_radiation.pdbx_wavelength _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_analyzer _diffrn_radiation.pdbx_scattering_type ? 1 ? ? 'Double Crystal' ? ? ? ? ? 1 M ? ? 'SINGLE WAVELENGTH' ? x-ray ? 2 ? ? ? ? ? ? ? ? 2 M ? ? 'SINGLE WAVELENGTH' ? x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.0 1.0 2 0.979 1.0 # loop_ _diffrn_source.current _diffrn_source.details _diffrn_source.diffrn_id _diffrn_source.power _diffrn_source.size _diffrn_source.source _diffrn_source.target _diffrn_source.type _diffrn_source.voltage _diffrn_source.take-off_angle _diffrn_source.pdbx_wavelength_list _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_synchrotron_site ? ? 1 ? ? SYNCHROTRON ? 'DIAMOND BEAMLINE I02' ? ? 1.0 ? I02 Diamond ? ? 2 ? ? SYNCHROTRON ? 'DIAMOND BEAMLINE I04' ? ? 0.979 ? I04 Diamond # _reflns.B_iso_Wilson_estimate 19.6 _reflns.entry_id 6GDJ _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.5 _reflns.d_resolution_low 41.39 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 26976 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.1 _reflns.pdbx_Rmerge_I_obs 0.155 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 6.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.173 _reflns.pdbx_Rpim_I_all 0.078 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.97 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.5 _reflns_shell.d_res_low 1.58 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.6 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 3891 _reflns_shell.percent_possible_all 99.6 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.455 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 4.9 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.509 _reflns_shell.pdbx_Rpim_I_all 0.226 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.92 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.47 _refine.aniso_B[1][2] -0.24 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] -0.47 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 1.53 _refine.B_iso_max ? _refine.B_iso_mean 22.947 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.971 _refine.correlation_coeff_Fo_to_Fc_free 0.965 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6GDJ _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.50 _refine.ls_d_res_low 41.39 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 25696 _refine.ls_number_reflns_R_free 1261 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.89 _refine.ls_percent_reflns_R_free 4.7 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.15380 _refine.ls_R_factor_R_free 0.18317 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.15233 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.061 _refine.pdbx_overall_ESU_R_Free 0.058 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1,2 _refine.overall_SU_B 2.313 _refine.overall_SU_ML 0.039 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 1027 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 56 _refine_hist.number_atoms_total 1095 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 41.39 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.020 0.019 1060 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 1040 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.804 2.007 1451 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.089 3.000 2410 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 4.149 5.000 140 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 35.009 24.000 30 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 10.582 15.000 172 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 19.306 15.000 6 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.128 0.200 193 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.010 0.021 1133 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 169 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 2.376 2.148 563 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 2.292 2.142 562 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 2.783 3.209 702 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 2.795 3.214 703 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 3.708 2.477 497 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 3.694 2.476 497 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 4.327 3.608 750 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 3.767 28.402 1208 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 3.766 28.442 1209 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? 3.978 3.000 2100 ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? 19.413 5.000 41 ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? 9.998 5.000 2100 ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.500 _refine_ls_shell.d_res_low 1.539 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 82 _refine_ls_shell.number_reflns_R_work 1886 _refine_ls_shell.percent_reflns_obs 99.60 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.233 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.202 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6GDJ _struct.title 'Crystal structure of Mto2 twin-cysteine dimerisation domain' _struct.pdbx_descriptor 'Uncharacterized protein C902.06' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6GDJ _struct_keywords.text 'Microtubule organisation Microtubule nucleation, STRUCTURAL PROTEIN' _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA A 4 ? THR A 18 ? ALA A 181 THR A 195 1 ? 15 HELX_P HELX_P2 AA2 SER A 22 ? SER A 43 ? SER A 199 SER A 220 1 ? 22 HELX_P HELX_P3 AA3 SER A 45 ? SER A 73 ? SER A 222 SER A 250 1 ? 29 HELX_P HELX_P4 AA4 ALA B 4 ? THR B 18 ? ALA B 181 THR B 195 1 ? 15 HELX_P HELX_P5 AA5 SER B 22 ? SER B 43 ? SER B 199 SER B 220 1 ? 22 HELX_P HELX_P6 AA6 SER B 45 ? ILE B 71 ? SER B 222 ILE B 248 1 ? 27 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GOL 401 ? 6 'binding site for residue GOL A 401' AC2 Software B GOL 401 ? 6 'binding site for residue GOL B 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ARG A 15 ? ARG A 192 . ? 1_555 ? 2 AC1 6 LEU A 60 ? LEU A 237 . ? 1_555 ? 3 AC1 6 GLN A 64 ? GLN A 241 . ? 1_555 ? 4 AC1 6 GLN B 31 ? GLN B 208 . ? 5_664 ? 5 AC1 6 HOH F . ? HOH B 518 . ? 5_664 ? 6 AC1 6 HOH F . ? HOH B 529 . ? 5_664 ? 7 AC2 6 HOH E . ? HOH A 505 . ? 2_635 ? 8 AC2 6 SER B 46 ? SER B 223 . ? 1_555 ? 9 AC2 6 LEU B 60 ? LEU B 237 . ? 2_635 ? 10 AC2 6 GLY B 61 ? GLY B 238 . ? 2_635 ? 11 AC2 6 GLN B 64 ? GLN B 241 . ? 2_635 ? 12 AC2 6 HOH F . ? HOH B 506 . ? 1_555 ? # _atom_sites.entry_id 6GDJ _atom_sites.fract_transf_matrix[1][1] 0.013568 _atom_sites.fract_transf_matrix[1][2] 0.007833 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015667 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018395 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 178 ? ? ? A . n A 1 2 GLY 2 179 ? ? ? A . n A 1 3 PRO 3 180 180 PRO PRO A . n A 1 4 ALA 4 181 181 ALA ALA A . n A 1 5 PRO 5 182 182 PRO PRO A . n A 1 6 LEU 6 183 183 LEU LEU A . n A 1 7 SER 7 184 184 SER SER A . n A 1 8 THR 8 185 185 THR THR A . n A 1 9 MET 9 186 186 MET MET A . n A 1 10 GLN 10 187 187 GLN GLN A . n A 1 11 THR 11 188 188 THR THR A . n A 1 12 ALA 12 189 189 ALA ALA A . n A 1 13 LEU 13 190 190 LEU LEU A . n A 1 14 MET 14 191 191 MET MET A . n A 1 15 ARG 15 192 192 ARG ARG A . n A 1 16 LEU 16 193 193 LEU LEU A . n A 1 17 ARG 17 194 194 ARG ARG A . n A 1 18 THR 18 195 195 THR THR A . n A 1 19 TYR 19 196 196 TYR TYR A . n A 1 20 HIS 20 197 197 HIS HIS A . n A 1 21 PRO 21 198 198 PRO PRO A . n A 1 22 SER 22 199 199 SER SER A . n A 1 23 PRO 23 200 200 PRO PRO A . n A 1 24 ILE 24 201 201 ILE ILE A . n A 1 25 ILE 25 202 202 ILE ILE A . n A 1 26 LEU 26 203 203 LEU LEU A . n A 1 27 LYS 27 204 204 LYS LYS A . n A 1 28 PRO 28 205 205 PRO PRO A . n A 1 29 VAL 29 206 206 VAL VAL A . n A 1 30 GLU 30 207 207 GLU GLU A . n A 1 31 GLN 31 208 208 GLN GLN A . n A 1 32 ALA 32 209 209 ALA ALA A . n A 1 33 VAL 33 210 210 VAL VAL A . n A 1 34 ASN 34 211 211 ASN ASN A . n A 1 35 HIS 35 212 212 HIS HIS A . n A 1 36 ALA 36 213 213 ALA ALA A . n A 1 37 ILE 37 214 214 ILE ILE A . n A 1 38 THR 38 215 215 THR THR A . n A 1 39 LEU 39 216 216 LEU LEU A . n A 1 40 VAL 40 217 217 VAL VAL A . n A 1 41 ASN 41 218 218 ASN ASN A . n A 1 42 THR 42 219 219 THR THR A . n A 1 43 SER 43 220 220 SER SER A . n A 1 44 PRO 44 221 221 PRO PRO A . n A 1 45 SER 45 222 222 SER SER A . n A 1 46 SER 46 223 223 SER SER A . n A 1 47 VAL 47 224 224 VAL VAL A . n A 1 48 VAL 48 225 225 VAL VAL A . n A 1 49 ASP 49 226 226 ASP ASP A . n A 1 50 ALA 50 227 227 ALA ALA A . n A 1 51 LEU 51 228 228 LEU LEU A . n A 1 52 CYS 52 229 229 CYS CYS A . n A 1 53 ARG 53 230 230 ARG ARG A . n A 1 54 SER 54 231 231 SER SER A . n A 1 55 LEU 55 232 232 LEU LEU A . n A 1 56 ALA 56 233 233 ALA ALA A . n A 1 57 GLU 57 234 234 GLU GLU A . n A 1 58 LEU 58 235 235 LEU LEU A . n A 1 59 CYS 59 236 236 CYS CYS A . n A 1 60 LEU 60 237 237 LEU LEU A . n A 1 61 GLY 61 238 238 GLY GLY A . n A 1 62 LEU 62 239 239 LEU LEU A . n A 1 63 VAL 63 240 240 VAL VAL A . n A 1 64 GLN 64 241 241 GLN GLN A . n A 1 65 GLU 65 242 242 GLU GLU A . n A 1 66 ALA 66 243 243 ALA ALA A . n A 1 67 ILE 67 244 244 ILE ILE A . n A 1 68 ASP 68 245 245 ASP ASP A . n A 1 69 ALA 69 246 246 ALA ALA A . n A 1 70 SER 70 247 247 SER SER A . n A 1 71 ILE 71 248 248 ILE ILE A . n A 1 72 LEU 72 249 249 LEU LEU A . n A 1 73 SER 73 250 250 SER SER A . n A 1 74 GLN 74 251 ? ? ? A . n A 1 75 GLN 75 252 ? ? ? A . n A 1 76 GLU 76 253 ? ? ? A . n A 1 77 SER 77 254 ? ? ? A . n A 1 78 SER 78 255 ? ? ? A . n A 1 79 ASN 79 256 ? ? ? A . n A 1 80 SER 80 257 ? ? ? A . n A 1 81 LEU 81 258 ? ? ? A . n A 1 82 ASP 82 259 ? ? ? A . n A 1 83 LEU 83 260 ? ? ? A . n A 1 84 VAL 84 261 ? ? ? A . n A 1 85 ARG 85 262 ? ? ? A . n A 1 86 HIS 86 263 ? ? ? A . n A 1 87 THR 87 264 ? ? ? A . n A 1 88 PRO 88 265 ? ? ? A . n B 1 1 GLY 1 178 ? ? ? B . n B 1 2 GLY 2 179 ? ? ? B . n B 1 3 PRO 3 180 180 PRO PRO B . n B 1 4 ALA 4 181 181 ALA ALA B . n B 1 5 PRO 5 182 182 PRO PRO B . n B 1 6 LEU 6 183 183 LEU LEU B . n B 1 7 SER 7 184 184 SER SER B . n B 1 8 THR 8 185 185 THR THR B . n B 1 9 MET 9 186 186 MET MET B . n B 1 10 GLN 10 187 187 GLN GLN B . n B 1 11 THR 11 188 188 THR THR B . n B 1 12 ALA 12 189 189 ALA ALA B . n B 1 13 LEU 13 190 190 LEU LEU B . n B 1 14 MET 14 191 191 MET MET B . n B 1 15 ARG 15 192 192 ARG ARG B . n B 1 16 LEU 16 193 193 LEU LEU B . n B 1 17 ARG 17 194 194 ARG ARG B . n B 1 18 THR 18 195 195 THR THR B . n B 1 19 TYR 19 196 196 TYR TYR B . n B 1 20 HIS 20 197 197 HIS HIS B . n B 1 21 PRO 21 198 198 PRO PRO B . n B 1 22 SER 22 199 199 SER SER B . n B 1 23 PRO 23 200 200 PRO PRO B . n B 1 24 ILE 24 201 201 ILE ILE B . n B 1 25 ILE 25 202 202 ILE ILE B . n B 1 26 LEU 26 203 203 LEU LEU B . n B 1 27 LYS 27 204 204 LYS LYS B . n B 1 28 PRO 28 205 205 PRO PRO B . n B 1 29 VAL 29 206 206 VAL VAL B . n B 1 30 GLU 30 207 207 GLU GLU B . n B 1 31 GLN 31 208 208 GLN GLN B . n B 1 32 ALA 32 209 209 ALA ALA B . n B 1 33 VAL 33 210 210 VAL VAL B . n B 1 34 ASN 34 211 211 ASN ASN B . n B 1 35 HIS 35 212 212 HIS HIS B . n B 1 36 ALA 36 213 213 ALA ALA B . n B 1 37 ILE 37 214 214 ILE ILE B . n B 1 38 THR 38 215 215 THR THR B . n B 1 39 LEU 39 216 216 LEU LEU B . n B 1 40 VAL 40 217 217 VAL VAL B . n B 1 41 ASN 41 218 218 ASN ASN B . n B 1 42 THR 42 219 219 THR THR B . n B 1 43 SER 43 220 220 SER SER B . n B 1 44 PRO 44 221 221 PRO PRO B . n B 1 45 SER 45 222 222 SER SER B . n B 1 46 SER 46 223 223 SER SER B . n B 1 47 VAL 47 224 224 VAL VAL B . n B 1 48 VAL 48 225 225 VAL VAL B . n B 1 49 ASP 49 226 226 ASP ASP B . n B 1 50 ALA 50 227 227 ALA ALA B . n B 1 51 LEU 51 228 228 LEU LEU B . n B 1 52 CYS 52 229 229 CYS CYS B . n B 1 53 ARG 53 230 230 ARG ARG B . n B 1 54 SER 54 231 231 SER SER B . n B 1 55 LEU 55 232 232 LEU LEU B . n B 1 56 ALA 56 233 233 ALA ALA B . n B 1 57 GLU 57 234 234 GLU GLU B . n B 1 58 LEU 58 235 235 LEU LEU B . n B 1 59 CYS 59 236 236 CYS CYS B . n B 1 60 LEU 60 237 237 LEU LEU B . n B 1 61 GLY 61 238 238 GLY GLY B . n B 1 62 LEU 62 239 239 LEU LEU B . n B 1 63 VAL 63 240 240 VAL VAL B . n B 1 64 GLN 64 241 241 GLN GLN B . n B 1 65 GLU 65 242 242 GLU GLU B . n B 1 66 ALA 66 243 243 ALA ALA B . n B 1 67 ILE 67 244 244 ILE ILE B . n B 1 68 ASP 68 245 245 ASP ASP B . n B 1 69 ALA 69 246 246 ALA ALA B . n B 1 70 SER 70 247 247 SER SER B . n B 1 71 ILE 71 248 248 ILE ILE B . n B 1 72 LEU 72 249 ? ? ? B . n B 1 73 SER 73 250 ? ? ? B . n B 1 74 GLN 74 251 ? ? ? B . n B 1 75 GLN 75 252 ? ? ? B . n B 1 76 GLU 76 253 ? ? ? B . n B 1 77 SER 77 254 ? ? ? B . n B 1 78 SER 78 255 ? ? ? B . n B 1 79 ASN 79 256 ? ? ? B . n B 1 80 SER 80 257 ? ? ? B . n B 1 81 LEU 81 258 ? ? ? B . n B 1 82 ASP 82 259 ? ? ? B . n B 1 83 LEU 83 260 ? ? ? B . n B 1 84 VAL 84 261 ? ? ? B . n B 1 85 ARG 85 262 ? ? ? B . n B 1 86 HIS 86 263 ? ? ? B . n B 1 87 THR 87 264 ? ? ? B . n B 1 88 PRO 88 265 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL 1 401 1 GOL GOL A . D 2 GOL 1 401 1 GOL GOL B . E 3 HOH 1 501 58 HOH HOH A . E 3 HOH 2 502 46 HOH HOH A . E 3 HOH 3 503 24 HOH HOH A . E 3 HOH 4 504 13 HOH HOH A . E 3 HOH 5 505 22 HOH HOH A . E 3 HOH 6 506 15 HOH HOH A . E 3 HOH 7 507 10 HOH HOH A . E 3 HOH 8 508 18 HOH HOH A . E 3 HOH 9 509 1 HOH HOH A . E 3 HOH 10 510 36 HOH HOH A . E 3 HOH 11 511 26 HOH HOH A . E 3 HOH 12 512 30 HOH HOH A . E 3 HOH 13 513 29 HOH HOH A . E 3 HOH 14 514 16 HOH HOH A . E 3 HOH 15 515 66 HOH HOH A . E 3 HOH 16 516 59 HOH HOH A . E 3 HOH 17 517 21 HOH HOH A . E 3 HOH 18 518 70 HOH HOH A . E 3 HOH 19 519 57 HOH HOH A . E 3 HOH 20 520 7 HOH HOH A . E 3 HOH 21 521 28 HOH HOH A . E 3 HOH 22 522 68 HOH HOH A . E 3 HOH 23 523 54 HOH HOH A . E 3 HOH 24 524 48 HOH HOH A . E 3 HOH 25 525 50 HOH HOH A . E 3 HOH 26 526 55 HOH HOH A . E 3 HOH 27 527 39 HOH HOH A . F 3 HOH 1 501 63 HOH HOH B . F 3 HOH 2 502 62 HOH HOH B . F 3 HOH 3 503 27 HOH HOH B . F 3 HOH 4 504 33 HOH HOH B . F 3 HOH 5 505 23 HOH HOH B . F 3 HOH 6 506 2 HOH HOH B . F 3 HOH 7 507 35 HOH HOH B . F 3 HOH 8 508 47 HOH HOH B . F 3 HOH 9 509 19 HOH HOH B . F 3 HOH 10 510 17 HOH HOH B . F 3 HOH 11 511 3 HOH HOH B . F 3 HOH 12 512 37 HOH HOH B . F 3 HOH 13 513 69 HOH HOH B . F 3 HOH 14 514 32 HOH HOH B . F 3 HOH 15 515 4 HOH HOH B . F 3 HOH 16 516 12 HOH HOH B . F 3 HOH 17 517 11 HOH HOH B . F 3 HOH 18 518 5 HOH HOH B . F 3 HOH 19 519 51 HOH HOH B . F 3 HOH 20 520 60 HOH HOH B . F 3 HOH 21 521 9 HOH HOH B . F 3 HOH 22 522 34 HOH HOH B . F 3 HOH 23 523 44 HOH HOH B . F 3 HOH 24 524 38 HOH HOH B . F 3 HOH 25 525 53 HOH HOH B . F 3 HOH 26 526 41 HOH HOH B . F 3 HOH 27 527 64 HOH HOH B . F 3 HOH 28 528 43 HOH HOH B . F 3 HOH 29 529 14 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2340 ? 1 MORE -24 ? 1 'SSA (A^2)' 7260 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2019-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0158 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 'November 3, 2014' 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? 3.3.16 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.3.0 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 220 ? A -152.82 60.81 2 1 SER A 220 ? B -146.62 57.57 3 1 SER B 220 ? ? -143.26 59.09 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 187 ? CD ? A GLN 10 CD 2 1 Y 1 A GLN 187 ? OE1 ? A GLN 10 OE1 3 1 Y 1 A GLN 187 ? NE2 ? A GLN 10 NE2 4 1 Y 1 A LYS 204 ? CE ? A LYS 27 CE 5 1 Y 1 A LYS 204 ? NZ ? A LYS 27 NZ 6 1 Y 1 A GLU 234 ? CD ? A GLU 57 CD 7 1 Y 1 A GLU 234 ? OE1 ? A GLU 57 OE1 8 1 Y 1 A GLU 234 ? OE2 ? A GLU 57 OE2 9 1 Y 1 A LEU 249 ? CG ? A LEU 72 CG 10 1 Y 1 A LEU 249 ? CD1 ? A LEU 72 CD1 11 1 Y 1 A LEU 249 ? CD2 ? A LEU 72 CD2 12 1 Y 1 A SER 250 ? OG ? A SER 73 OG 13 1 Y 1 B LYS 204 ? NZ ? B LYS 27 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 178 ? A GLY 1 2 1 Y 1 A GLY 179 ? A GLY 2 3 1 Y 1 A GLN 251 ? A GLN 74 4 1 Y 1 A GLN 252 ? A GLN 75 5 1 Y 1 A GLU 253 ? A GLU 76 6 1 Y 1 A SER 254 ? A SER 77 7 1 Y 1 A SER 255 ? A SER 78 8 1 Y 1 A ASN 256 ? A ASN 79 9 1 Y 1 A SER 257 ? A SER 80 10 1 Y 1 A LEU 258 ? A LEU 81 11 1 Y 1 A ASP 259 ? A ASP 82 12 1 Y 1 A LEU 260 ? A LEU 83 13 1 Y 1 A VAL 261 ? A VAL 84 14 1 Y 1 A ARG 262 ? A ARG 85 15 1 Y 1 A HIS 263 ? A HIS 86 16 1 Y 1 A THR 264 ? A THR 87 17 1 Y 1 A PRO 265 ? A PRO 88 18 1 Y 1 B GLY 178 ? B GLY 1 19 1 Y 1 B GLY 179 ? B GLY 2 20 1 Y 1 B LEU 249 ? B LEU 72 21 1 Y 1 B SER 250 ? B SER 73 22 1 Y 1 B GLN 251 ? B GLN 74 23 1 Y 1 B GLN 252 ? B GLN 75 24 1 Y 1 B GLU 253 ? B GLU 76 25 1 Y 1 B SER 254 ? B SER 77 26 1 Y 1 B SER 255 ? B SER 78 27 1 Y 1 B ASN 256 ? B ASN 79 28 1 Y 1 B SER 257 ? B SER 80 29 1 Y 1 B LEU 258 ? B LEU 81 30 1 Y 1 B ASP 259 ? B ASP 82 31 1 Y 1 B LEU 260 ? B LEU 83 32 1 Y 1 B VAL 261 ? B VAL 84 33 1 Y 1 B ARG 262 ? B ARG 85 34 1 Y 1 B HIS 263 ? B HIS 86 35 1 Y 1 B THR 264 ? B THR 87 36 1 Y 1 B PRO 265 ? B PRO 88 # _pdbx_audit_support.funding_organization 'Wellcome Trust' _pdbx_audit_support.country 'United Kingdom' _pdbx_audit_support.grant_number 094517/z/10/z _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 water HOH # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'isothermal titration calorimetry' 'dilution ITC does not dissociate this dimer' 2 1 'gel filtration' 'SEC-MALS data indicate that this molecule is a homodimer' #