data_6GN7 # _entry.id 6GN7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6GN7 pdb_00006gn7 10.2210/pdb6gn7/pdb WWPDB D_1200010273 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-10-17 2 'Structure model' 1 1 2018-10-24 3 'Structure model' 1 2 2018-11-07 4 'Structure model' 1 3 2018-12-26 5 'Structure model' 1 4 2019-03-27 6 'Structure model' 2 0 2020-07-29 7 'Structure model' 2 1 2024-01-17 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 6 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Data collection' 3 2 'Structure model' 'Database references' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Derived calculations' 10 5 'Structure model' 'Structure summary' 11 6 'Structure model' Advisory 12 6 'Structure model' 'Atomic model' 13 6 'Structure model' 'Data collection' 14 6 'Structure model' 'Derived calculations' 15 6 'Structure model' 'Structure summary' 16 7 'Structure model' 'Data collection' 17 7 'Structure model' 'Database references' 18 7 'Structure model' 'Derived calculations' 19 7 'Structure model' 'Refinement description' 20 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' pdbx_validate_close_contact 3 3 'Structure model' citation 4 4 'Structure model' citation 5 5 'Structure model' pdbx_molecule 6 5 'Structure model' pdbx_molecule_features 7 5 'Structure model' pdbx_seq_map_depositor_info 8 5 'Structure model' struct_conn 9 5 'Structure model' struct_site 10 5 'Structure model' struct_site_gen 11 6 'Structure model' atom_site 12 6 'Structure model' chem_comp 13 6 'Structure model' entity 14 6 'Structure model' pdbx_branch_scheme 15 6 'Structure model' pdbx_chem_comp_identifier 16 6 'Structure model' pdbx_entity_branch 17 6 'Structure model' pdbx_entity_branch_descriptor 18 6 'Structure model' pdbx_entity_branch_link 19 6 'Structure model' pdbx_entity_branch_list 20 6 'Structure model' pdbx_entity_nonpoly 21 6 'Structure model' pdbx_molecule 22 6 'Structure model' pdbx_nonpoly_scheme 23 6 'Structure model' pdbx_struct_assembly_gen 24 6 'Structure model' pdbx_struct_conn_angle 25 6 'Structure model' pdbx_validate_close_contact 26 6 'Structure model' struct_asym 27 6 'Structure model' struct_conn 28 6 'Structure model' struct_site 29 6 'Structure model' struct_site_gen 30 7 'Structure model' chem_comp 31 7 'Structure model' chem_comp_atom 32 7 'Structure model' chem_comp_bond 33 7 'Structure model' database_2 34 7 'Structure model' pdbx_initial_refinement_model 35 7 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_DOI' 2 2 'Structure model' '_pdbx_validate_close_contact.auth_atom_id_1' 3 2 'Structure model' '_pdbx_validate_close_contact.auth_atom_id_2' 4 2 'Structure model' '_pdbx_validate_close_contact.auth_comp_id_1' 5 2 'Structure model' '_pdbx_validate_close_contact.auth_comp_id_2' 6 2 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1' 7 2 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 8 3 'Structure model' '_citation.pdbx_database_id_PubMed' 9 3 'Structure model' '_citation.title' 10 4 'Structure model' '_citation.journal_volume' 11 4 'Structure model' '_citation.page_first' 12 4 'Structure model' '_citation.page_last' 13 5 'Structure model' '_pdbx_seq_map_depositor_info.one_letter_code_mod' 14 5 'Structure model' '_struct_conn.pdbx_dist_value' 15 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 16 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 17 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 18 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 19 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 20 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 21 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 22 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 23 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 24 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 25 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 26 5 'Structure model' '_struct_site.details' 27 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 28 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 29 5 'Structure model' '_struct_site.pdbx_auth_seq_id' 30 5 'Structure model' '_struct_site.pdbx_num_residues' 31 5 'Structure model' '_struct_site_gen.auth_asym_id' 32 5 'Structure model' '_struct_site_gen.auth_comp_id' 33 5 'Structure model' '_struct_site_gen.auth_seq_id' 34 5 'Structure model' '_struct_site_gen.label_asym_id' 35 5 'Structure model' '_struct_site_gen.label_comp_id' 36 5 'Structure model' '_struct_site_gen.label_seq_id' 37 5 'Structure model' '_struct_site_gen.pdbx_auth_ins_code' 38 5 'Structure model' '_struct_site_gen.pdbx_num_res' 39 5 'Structure model' '_struct_site_gen.site_id' 40 5 'Structure model' '_struct_site_gen.symmetry' 41 6 'Structure model' '_atom_site.B_iso_or_equiv' 42 6 'Structure model' '_atom_site.Cartn_x' 43 6 'Structure model' '_atom_site.Cartn_y' 44 6 'Structure model' '_atom_site.Cartn_z' 45 6 'Structure model' '_atom_site.auth_asym_id' 46 6 'Structure model' '_atom_site.auth_atom_id' 47 6 'Structure model' '_atom_site.auth_comp_id' 48 6 'Structure model' '_atom_site.auth_seq_id' 49 6 'Structure model' '_atom_site.label_asym_id' 50 6 'Structure model' '_atom_site.label_atom_id' 51 6 'Structure model' '_atom_site.label_comp_id' 52 6 'Structure model' '_atom_site.label_entity_id' 53 6 'Structure model' '_atom_site.type_symbol' 54 6 'Structure model' '_chem_comp.name' 55 6 'Structure model' '_chem_comp.type' 56 6 'Structure model' '_pdbx_molecule.asym_id' 57 6 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 58 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 59 6 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 60 6 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 61 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 62 6 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 63 6 'Structure model' '_pdbx_struct_conn_angle.value' 64 6 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_1' 65 6 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_2' 66 6 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1' 67 6 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 68 6 'Structure model' '_struct_conn.conn_type_id' 69 6 'Structure model' '_struct_conn.id' 70 6 'Structure model' '_struct_conn.pdbx_dist_value' 71 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 72 6 'Structure model' '_struct_conn.pdbx_role' 73 6 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 74 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 75 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 76 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 77 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 78 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 79 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 80 6 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 81 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 82 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 83 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 84 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 85 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 86 7 'Structure model' '_chem_comp.pdbx_synonyms' 87 7 'Structure model' '_database_2.pdbx_DOI' 88 7 'Structure model' '_database_2.pdbx_database_accession' 89 7 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6GN7 _pdbx_database_status.recvd_initial_deposition_date 2018-05-30 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 6EVV _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Troisi, R.' 1 0000-0002-3484-3589 'Russo Krauss, I.' 2 0000-0001-8124-6034 'Sica, F.' 3 0000-0003-4501-4476 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 46 _citation.language ? _citation.page_first 12177 _citation.page_last 12185 _citation.title 'Several structural motifs cooperate in determining the highly effective anti-thrombin activity of NU172 aptamer.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gky990 _citation.pdbx_database_id_PubMed 30357392 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Troisi, R.' 1 ? primary 'Napolitano, V.' 2 ? primary 'Spiridonova, V.' 3 ? primary 'Russo Krauss, I.' 4 ? primary 'Sica, F.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat Prothrombin 4096.534 1 3.4.21.5 ? ? ? 2 polymer nat Prothrombin 29780.219 1 3.4.21.5 ? ? ? 3 polymer syn 'NU172, DNA (26-MER)' 8172.223 1 ? ? ? ? 4 branched man ;N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 1405.271 1 ? ? ? ? 5 non-polymer syn 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide' 453.986 1 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 7 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 8 water nat water 18.015 110 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Coagulation factor II' 2 'Coagulation factor II' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR L ? 2 'polypeptide(L)' no no ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; H ? 3 polydeoxyribonucleotide no no ;(DC)(DG)(DC)(DC)(DT)(DA)(DG)(DG)(DT)(DT)(DG)(DG)(DG)(DT)(DA)(DG)(DG)(DG)(DT)(DG) (DG)(DT)(DG)(DG)(DC)(DG) ; CGCCTAGGTTGGGTAGGGTGGTGGCG E ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide' 0G6 6 'SODIUM ION' NA 7 GLYCEROL GOL 8 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 PHE n 1 3 GLY n 1 4 SER n 1 5 GLY n 1 6 GLU n 1 7 ALA n 1 8 ASP n 1 9 CYS n 1 10 GLY n 1 11 LEU n 1 12 ARG n 1 13 PRO n 1 14 LEU n 1 15 PHE n 1 16 GLU n 1 17 LYS n 1 18 LYS n 1 19 SER n 1 20 LEU n 1 21 GLU n 1 22 ASP n 1 23 LYS n 1 24 THR n 1 25 GLU n 1 26 ARG n 1 27 GLU n 1 28 LEU n 1 29 LEU n 1 30 GLU n 1 31 SER n 1 32 TYR n 1 33 ILE n 1 34 ASP n 1 35 GLY n 1 36 ARG n 2 1 ILE n 2 2 VAL n 2 3 GLU n 2 4 GLY n 2 5 SER n 2 6 ASP n 2 7 ALA n 2 8 GLU n 2 9 ILE n 2 10 GLY n 2 11 MET n 2 12 SER n 2 13 PRO n 2 14 TRP n 2 15 GLN n 2 16 VAL n 2 17 MET n 2 18 LEU n 2 19 PHE n 2 20 ARG n 2 21 LYS n 2 22 SER n 2 23 PRO n 2 24 GLN n 2 25 GLU n 2 26 LEU n 2 27 LEU n 2 28 CYS n 2 29 GLY n 2 30 ALA n 2 31 SER n 2 32 LEU n 2 33 ILE n 2 34 SER n 2 35 ASP n 2 36 ARG n 2 37 TRP n 2 38 VAL n 2 39 LEU n 2 40 THR n 2 41 ALA n 2 42 ALA n 2 43 HIS n 2 44 CYS n 2 45 LEU n 2 46 LEU n 2 47 TYR n 2 48 PRO n 2 49 PRO n 2 50 TRP n 2 51 ASP n 2 52 LYS n 2 53 ASN n 2 54 PHE n 2 55 THR n 2 56 GLU n 2 57 ASN n 2 58 ASP n 2 59 LEU n 2 60 LEU n 2 61 VAL n 2 62 ARG n 2 63 ILE n 2 64 GLY n 2 65 LYS n 2 66 HIS n 2 67 SER n 2 68 ARG n 2 69 THR n 2 70 ARG n 2 71 TYR n 2 72 GLU n 2 73 ARG n 2 74 ASN n 2 75 ILE n 2 76 GLU n 2 77 LYS n 2 78 ILE n 2 79 SER n 2 80 MET n 2 81 LEU n 2 82 GLU n 2 83 LYS n 2 84 ILE n 2 85 TYR n 2 86 ILE n 2 87 HIS n 2 88 PRO n 2 89 ARG n 2 90 TYR n 2 91 ASN n 2 92 TRP n 2 93 ARG n 2 94 GLU n 2 95 ASN n 2 96 LEU n 2 97 ASP n 2 98 ARG n 2 99 ASP n 2 100 ILE n 2 101 ALA n 2 102 LEU n 2 103 MET n 2 104 LYS n 2 105 LEU n 2 106 LYS n 2 107 LYS n 2 108 PRO n 2 109 VAL n 2 110 ALA n 2 111 PHE n 2 112 SER n 2 113 ASP n 2 114 TYR n 2 115 ILE n 2 116 HIS n 2 117 PRO n 2 118 VAL n 2 119 CYS n 2 120 LEU n 2 121 PRO n 2 122 ASP n 2 123 ARG n 2 124 GLU n 2 125 THR n 2 126 ALA n 2 127 ALA n 2 128 SER n 2 129 LEU n 2 130 LEU n 2 131 GLN n 2 132 ALA n 2 133 GLY n 2 134 TYR n 2 135 LYS n 2 136 GLY n 2 137 ARG n 2 138 VAL n 2 139 THR n 2 140 GLY n 2 141 TRP n 2 142 GLY n 2 143 ASN n 2 144 LEU n 2 145 LYS n 2 146 GLU n 2 147 THR n 2 148 TRP n 2 149 THR n 2 150 ALA n 2 151 ASN n 2 152 VAL n 2 153 GLY n 2 154 LYS n 2 155 GLY n 2 156 GLN n 2 157 PRO n 2 158 SER n 2 159 VAL n 2 160 LEU n 2 161 GLN n 2 162 VAL n 2 163 VAL n 2 164 ASN n 2 165 LEU n 2 166 PRO n 2 167 ILE n 2 168 VAL n 2 169 GLU n 2 170 ARG n 2 171 PRO n 2 172 VAL n 2 173 CYS n 2 174 LYS n 2 175 ASP n 2 176 SER n 2 177 THR n 2 178 ARG n 2 179 ILE n 2 180 ARG n 2 181 ILE n 2 182 THR n 2 183 ASP n 2 184 ASN n 2 185 MET n 2 186 PHE n 2 187 CYS n 2 188 ALA n 2 189 GLY n 2 190 TYR n 2 191 LYS n 2 192 PRO n 2 193 ASP n 2 194 GLU n 2 195 GLY n 2 196 LYS n 2 197 ARG n 2 198 GLY n 2 199 ASP n 2 200 ALA n 2 201 CYS n 2 202 GLU n 2 203 GLY n 2 204 ASP n 2 205 SER n 2 206 GLY n 2 207 GLY n 2 208 PRO n 2 209 PHE n 2 210 VAL n 2 211 MET n 2 212 LYS n 2 213 SER n 2 214 PRO n 2 215 PHE n 2 216 ASN n 2 217 ASN n 2 218 ARG n 2 219 TRP n 2 220 TYR n 2 221 GLN n 2 222 MET n 2 223 GLY n 2 224 ILE n 2 225 VAL n 2 226 SER n 2 227 TRP n 2 228 GLY n 2 229 GLU n 2 230 GLY n 2 231 CYS n 2 232 ASP n 2 233 ARG n 2 234 ASP n 2 235 GLY n 2 236 LYS n 2 237 TYR n 2 238 GLY n 2 239 PHE n 2 240 TYR n 2 241 THR n 2 242 HIS n 2 243 VAL n 2 244 PHE n 2 245 ARG n 2 246 LEU n 2 247 LYS n 2 248 LYS n 2 249 TRP n 2 250 ILE n 2 251 GLN n 2 252 LYS n 2 253 VAL n 2 254 ILE n 2 255 ASP n 2 256 GLN n 2 257 PHE n 2 258 GLY n 2 259 GLU n 3 1 DC n 3 2 DG n 3 3 DC n 3 4 DC n 3 5 DT n 3 6 DA n 3 7 DG n 3 8 DG n 3 9 DT n 3 10 DT n 3 11 DG n 3 12 DG n 3 13 DG n 3 14 DT n 3 15 DA n 3 16 DG n 3 17 DG n 3 18 DG n 3 19 DT n 3 20 DG n 3 21 DG n 3 22 DT n 3 23 DG n 3 24 DG n 3 25 DC n 3 26 DG n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample 1 36 Human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 1 259 Human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _pdbx_entity_src_syn.entity_id 3 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 26 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 4 DNeup5Aca2-6DGalpb1-4DGlcpNAcb1-2DManpa1-6DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 4 ;WURCS=2.0/5,7,6/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-1-2-3-1-4-5/a4-b1_b4-c1_c6-d1_d2-e1_e4-f1_f6-g2 ; WURCS PDB2Glycan 1.1.0 3 4 ;[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(6+1)][a-D-Manp]{[(2+1)][b-D-GlcpNAc]{[(4+1)][b-D-Galp]{[(6+2)][a-D-Neup5Ac]{}}}}}}}} ; LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 4 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 4 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 4 4 MAN C1 O1 3 BMA O6 HO6 sing ? 4 4 5 NAG C1 O1 4 MAN O2 HO2 sing ? 5 4 6 GAL C1 O1 5 NAG O4 HO4 sing ? 6 4 7 SIA C2 O2 6 GAL O6 HO6 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0G6 peptide-like . 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide' PPACK 'C21 H34 Cl N6 O3 1' 453.986 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SIA 'D-saccharide, alpha linking' . 'N-acetyl-alpha-neuraminic acid' 'N-acetylneuraminic acid; sialic acid; alpha-sialic acid; O-SIALIC ACID' 'C11 H19 N O9' 309.270 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc SIA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DNeup5Aca SIA 'COMMON NAME' GMML 1.0 'N-acetyl-a-D-neuraminic acid' SIA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Neup5Ac SIA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Neu5Ac # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 1 THR THR L H n A 1 2 PHE 2 1 1 PHE PHE L G n A 1 3 GLY 3 1 1 GLY GLY L F n A 1 4 SER 4 1 1 SER SER L E n A 1 5 GLY 5 1 1 GLY GLY L D n A 1 6 GLU 6 1 1 GLU GLU L C n A 1 7 ALA 7 1 1 ALA ALA L B n A 1 8 ASP 8 1 1 ASP ASP L A n A 1 9 CYS 9 1 1 CYS CYS L . n A 1 10 GLY 10 2 2 GLY GLY L . n A 1 11 LEU 11 3 3 LEU LEU L . n A 1 12 ARG 12 4 4 ARG ARG L . n A 1 13 PRO 13 5 5 PRO PRO L . n A 1 14 LEU 14 6 6 LEU LEU L . n A 1 15 PHE 15 7 7 PHE PHE L . n A 1 16 GLU 16 8 8 GLU GLU L . n A 1 17 LYS 17 9 9 LYS LYS L . n A 1 18 LYS 18 10 10 LYS LYS L . n A 1 19 SER 19 11 11 SER SER L . n A 1 20 LEU 20 12 12 LEU LEU L . n A 1 21 GLU 21 13 13 GLU GLU L . n A 1 22 ASP 22 14 14 ASP ASP L . n A 1 23 LYS 23 14 14 LYS LYS L A n A 1 24 THR 24 14 14 THR THR L B n A 1 25 GLU 25 14 14 GLU GLU L C n A 1 26 ARG 26 14 14 ARG ARG L D n A 1 27 GLU 27 14 14 GLU GLU L E n A 1 28 LEU 28 14 14 LEU LEU L F n A 1 29 LEU 29 14 14 LEU LEU L G n A 1 30 GLU 30 14 14 GLU GLU L H n A 1 31 SER 31 14 14 SER SER L I n A 1 32 TYR 32 14 14 TYR TYR L J n A 1 33 ILE 33 14 14 ILE ILE L K n A 1 34 ASP 34 15 ? ? ? L . n A 1 35 GLY 35 16 ? ? ? L . n A 1 36 ARG 36 17 ? ? ? L . n B 2 1 ILE 1 16 16 ILE ILE H . n B 2 2 VAL 2 17 17 VAL VAL H . n B 2 3 GLU 3 18 18 GLU GLU H . n B 2 4 GLY 4 19 19 GLY GLY H . n B 2 5 SER 5 20 20 SER SER H . n B 2 6 ASP 6 21 21 ASP ASP H . n B 2 7 ALA 7 22 22 ALA ALA H . n B 2 8 GLU 8 23 23 GLU GLU H . n B 2 9 ILE 9 24 24 ILE ILE H . n B 2 10 GLY 10 25 25 GLY GLY H . n B 2 11 MET 11 26 26 MET MET H . n B 2 12 SER 12 27 27 SER SER H . n B 2 13 PRO 13 28 28 PRO PRO H . n B 2 14 TRP 14 29 29 TRP TRP H . n B 2 15 GLN 15 30 30 GLN GLN H . n B 2 16 VAL 16 31 31 VAL VAL H . n B 2 17 MET 17 32 32 MET MET H . n B 2 18 LEU 18 33 33 LEU LEU H . n B 2 19 PHE 19 34 34 PHE PHE H . n B 2 20 ARG 20 35 35 ARG ARG H . n B 2 21 LYS 21 36 36 LYS LYS H . n B 2 22 SER 22 36 36 SER SER H A n B 2 23 PRO 23 37 37 PRO PRO H . n B 2 24 GLN 24 38 38 GLN GLN H . n B 2 25 GLU 25 39 39 GLU GLU H . n B 2 26 LEU 26 40 40 LEU LEU H . n B 2 27 LEU 27 41 41 LEU LEU H . n B 2 28 CYS 28 42 42 CYS CYS H . n B 2 29 GLY 29 43 43 GLY GLY H . n B 2 30 ALA 30 44 44 ALA ALA H . n B 2 31 SER 31 45 45 SER SER H . n B 2 32 LEU 32 46 46 LEU LEU H . n B 2 33 ILE 33 47 47 ILE ILE H . n B 2 34 SER 34 48 48 SER SER H . n B 2 35 ASP 35 49 49 ASP ASP H . n B 2 36 ARG 36 50 50 ARG ARG H . n B 2 37 TRP 37 51 51 TRP TRP H . n B 2 38 VAL 38 52 52 VAL VAL H . n B 2 39 LEU 39 53 53 LEU LEU H . n B 2 40 THR 40 54 54 THR THR H . n B 2 41 ALA 41 55 55 ALA ALA H . n B 2 42 ALA 42 56 56 ALA ALA H . n B 2 43 HIS 43 57 57 HIS HIS H . n B 2 44 CYS 44 58 58 CYS CYS H . n B 2 45 LEU 45 59 59 LEU LEU H . n B 2 46 LEU 46 60 60 LEU LEU H . n B 2 47 TYR 47 60 60 TYR TYR H A n B 2 48 PRO 48 60 60 PRO PRO H B n B 2 49 PRO 49 60 60 PRO PRO H C n B 2 50 TRP 50 60 60 TRP TRP H D n B 2 51 ASP 51 60 60 ASP ASP H E n B 2 52 LYS 52 60 60 LYS LYS H F n B 2 53 ASN 53 60 60 ASN ASN H G n B 2 54 PHE 54 60 60 PHE PHE H H n B 2 55 THR 55 60 60 THR THR H I n B 2 56 GLU 56 61 61 GLU GLU H . n B 2 57 ASN 57 62 62 ASN ASN H . n B 2 58 ASP 58 63 63 ASP ASP H . n B 2 59 LEU 59 64 64 LEU LEU H . n B 2 60 LEU 60 65 65 LEU LEU H . n B 2 61 VAL 61 66 66 VAL VAL H . n B 2 62 ARG 62 67 67 ARG ARG H . n B 2 63 ILE 63 68 68 ILE ILE H . n B 2 64 GLY 64 69 69 GLY GLY H . n B 2 65 LYS 65 70 70 LYS LYS H . n B 2 66 HIS 66 71 71 HIS HIS H . n B 2 67 SER 67 72 72 SER SER H . n B 2 68 ARG 68 73 73 ARG ARG H . n B 2 69 THR 69 74 74 THR THR H . n B 2 70 ARG 70 75 75 ARG ARG H . n B 2 71 TYR 71 76 76 TYR TYR H . n B 2 72 GLU 72 77 77 GLU GLU H . n B 2 73 ARG 73 77 77 ARG ARG H A n B 2 74 ASN 74 78 78 ASN ASN H . n B 2 75 ILE 75 79 79 ILE ILE H . n B 2 76 GLU 76 80 80 GLU GLU H . n B 2 77 LYS 77 81 81 LYS LYS H . n B 2 78 ILE 78 82 82 ILE ILE H . n B 2 79 SER 79 83 83 SER SER H . n B 2 80 MET 80 84 84 MET MET H . n B 2 81 LEU 81 85 85 LEU LEU H . n B 2 82 GLU 82 86 86 GLU GLU H . n B 2 83 LYS 83 87 87 LYS LYS H . n B 2 84 ILE 84 88 88 ILE ILE H . n B 2 85 TYR 85 89 89 TYR TYR H . n B 2 86 ILE 86 90 90 ILE ILE H . n B 2 87 HIS 87 91 91 HIS HIS H . n B 2 88 PRO 88 92 92 PRO PRO H . n B 2 89 ARG 89 93 93 ARG ARG H . n B 2 90 TYR 90 94 94 TYR TYR H . n B 2 91 ASN 91 95 95 ASN ASN H . n B 2 92 TRP 92 96 96 TRP TRP H . n B 2 93 ARG 93 97 97 ARG ARG H . n B 2 94 GLU 94 97 97 GLU GLU H A n B 2 95 ASN 95 98 98 ASN ASN H . n B 2 96 LEU 96 99 99 LEU LEU H . n B 2 97 ASP 97 100 100 ASP ASP H . n B 2 98 ARG 98 101 101 ARG ARG H . n B 2 99 ASP 99 102 102 ASP ASP H . n B 2 100 ILE 100 103 103 ILE ILE H . n B 2 101 ALA 101 104 104 ALA ALA H . n B 2 102 LEU 102 105 105 LEU LEU H . n B 2 103 MET 103 106 106 MET MET H . n B 2 104 LYS 104 107 107 LYS LYS H . n B 2 105 LEU 105 108 108 LEU LEU H . n B 2 106 LYS 106 109 109 LYS LYS H . n B 2 107 LYS 107 110 110 LYS LYS H . n B 2 108 PRO 108 111 111 PRO PRO H . n B 2 109 VAL 109 112 112 VAL VAL H . n B 2 110 ALA 110 113 113 ALA ALA H . n B 2 111 PHE 111 114 114 PHE PHE H . n B 2 112 SER 112 115 115 SER SER H . n B 2 113 ASP 113 116 116 ASP ASP H . n B 2 114 TYR 114 117 117 TYR TYR H . n B 2 115 ILE 115 118 118 ILE ILE H . n B 2 116 HIS 116 119 119 HIS HIS H . n B 2 117 PRO 117 120 120 PRO PRO H . n B 2 118 VAL 118 121 121 VAL VAL H . n B 2 119 CYS 119 122 122 CYS CYS H . n B 2 120 LEU 120 123 123 LEU LEU H . n B 2 121 PRO 121 124 124 PRO PRO H . n B 2 122 ASP 122 125 125 ASP ASP H . n B 2 123 ARG 123 126 126 ARG ARG H . n B 2 124 GLU 124 127 127 GLU GLU H . n B 2 125 THR 125 128 128 THR THR H . n B 2 126 ALA 126 129 129 ALA ALA H . n B 2 127 ALA 127 129 129 ALA ALA H A n B 2 128 SER 128 129 129 SER SER H B n B 2 129 LEU 129 129 129 LEU LEU H C n B 2 130 LEU 130 130 130 LEU LEU H . n B 2 131 GLN 131 131 131 GLN GLN H . n B 2 132 ALA 132 132 132 ALA ALA H . n B 2 133 GLY 133 133 133 GLY GLY H . n B 2 134 TYR 134 134 134 TYR TYR H . n B 2 135 LYS 135 135 135 LYS LYS H . n B 2 136 GLY 136 136 136 GLY GLY H . n B 2 137 ARG 137 137 137 ARG ARG H . n B 2 138 VAL 138 138 138 VAL VAL H . n B 2 139 THR 139 139 139 THR THR H . n B 2 140 GLY 140 140 140 GLY GLY H . n B 2 141 TRP 141 141 141 TRP TRP H . n B 2 142 GLY 142 142 142 GLY GLY H . n B 2 143 ASN 143 143 143 ASN ASN H . n B 2 144 LEU 144 144 144 LEU LEU H . n B 2 145 LYS 145 145 145 LYS LYS H . n B 2 146 GLU 146 146 146 GLU GLU H . n B 2 147 THR 147 147 147 THR THR H . n B 2 148 TRP 148 148 148 TRP TRP H . n B 2 149 THR 149 149 149 THR THR H . n B 2 150 ALA 150 149 149 ALA ALA H A n B 2 151 ASN 151 149 149 ASN ASN H B n B 2 152 VAL 152 149 149 VAL VAL H C n B 2 153 GLY 153 149 149 GLY GLY H D n B 2 154 LYS 154 149 149 LYS LYS H E n B 2 155 GLY 155 150 150 GLY GLY H . n B 2 156 GLN 156 151 151 GLN GLN H . n B 2 157 PRO 157 152 152 PRO PRO H . n B 2 158 SER 158 153 153 SER SER H . n B 2 159 VAL 159 154 154 VAL VAL H . n B 2 160 LEU 160 155 155 LEU LEU H . n B 2 161 GLN 161 156 156 GLN GLN H . n B 2 162 VAL 162 157 157 VAL VAL H . n B 2 163 VAL 163 158 158 VAL VAL H . n B 2 164 ASN 164 159 159 ASN ASN H . n B 2 165 LEU 165 160 160 LEU LEU H . n B 2 166 PRO 166 161 161 PRO PRO H . n B 2 167 ILE 167 162 162 ILE ILE H . n B 2 168 VAL 168 163 163 VAL VAL H . n B 2 169 GLU 169 164 164 GLU GLU H . n B 2 170 ARG 170 165 165 ARG ARG H . n B 2 171 PRO 171 166 166 PRO PRO H . n B 2 172 VAL 172 167 167 VAL VAL H . n B 2 173 CYS 173 168 168 CYS CYS H . n B 2 174 LYS 174 169 169 LYS LYS H . n B 2 175 ASP 175 170 170 ASP ASP H . n B 2 176 SER 176 171 171 SER SER H . n B 2 177 THR 177 172 172 THR THR H . n B 2 178 ARG 178 173 173 ARG ARG H . n B 2 179 ILE 179 174 174 ILE ILE H . n B 2 180 ARG 180 175 175 ARG ARG H . n B 2 181 ILE 181 176 176 ILE ILE H . n B 2 182 THR 182 177 177 THR THR H . n B 2 183 ASP 183 178 178 ASP ASP H . n B 2 184 ASN 184 179 179 ASN ASN H . n B 2 185 MET 185 180 180 MET MET H . n B 2 186 PHE 186 181 181 PHE PHE H . n B 2 187 CYS 187 182 182 CYS CYS H . n B 2 188 ALA 188 183 183 ALA ALA H . n B 2 189 GLY 189 184 184 GLY GLY H . n B 2 190 TYR 190 184 184 TYR TYR H A n B 2 191 LYS 191 185 185 LYS LYS H . n B 2 192 PRO 192 186 186 PRO PRO H . n B 2 193 ASP 193 186 186 ASP ASP H A n B 2 194 GLU 194 186 186 GLU GLU H B n B 2 195 GLY 195 186 186 GLY GLY H C n B 2 196 LYS 196 186 186 LYS LYS H D n B 2 197 ARG 197 187 187 ARG ARG H . n B 2 198 GLY 198 188 188 GLY GLY H . n B 2 199 ASP 199 189 189 ASP ASP H . n B 2 200 ALA 200 190 190 ALA ALA H . n B 2 201 CYS 201 191 191 CYS CYS H . n B 2 202 GLU 202 192 192 GLU GLU H . n B 2 203 GLY 203 193 193 GLY GLY H . n B 2 204 ASP 204 194 194 ASP ASP H . n B 2 205 SER 205 195 195 SER SER H . n B 2 206 GLY 206 196 196 GLY GLY H . n B 2 207 GLY 207 197 197 GLY GLY H . n B 2 208 PRO 208 198 198 PRO PRO H . n B 2 209 PHE 209 199 199 PHE PHE H . n B 2 210 VAL 210 200 200 VAL VAL H . n B 2 211 MET 211 201 201 MET MET H . n B 2 212 LYS 212 202 202 LYS LYS H . n B 2 213 SER 213 203 203 SER SER H . n B 2 214 PRO 214 204 204 PRO PRO H . n B 2 215 PHE 215 204 204 PHE PHE H A n B 2 216 ASN 216 204 204 ASN ASN H B n B 2 217 ASN 217 205 205 ASN ASN H . n B 2 218 ARG 218 206 206 ARG ARG H . n B 2 219 TRP 219 207 207 TRP TRP H . n B 2 220 TYR 220 208 208 TYR TYR H . n B 2 221 GLN 221 209 209 GLN GLN H . n B 2 222 MET 222 210 210 MET MET H . n B 2 223 GLY 223 211 211 GLY GLY H . n B 2 224 ILE 224 212 212 ILE ILE H . n B 2 225 VAL 225 213 213 VAL VAL H . n B 2 226 SER 226 214 214 SER SER H . n B 2 227 TRP 227 215 215 TRP TRP H . n B 2 228 GLY 228 216 216 GLY GLY H . n B 2 229 GLU 229 217 217 GLU GLU H . n B 2 230 GLY 230 219 219 GLY GLY H . n B 2 231 CYS 231 220 220 CYS CYS H . n B 2 232 ASP 232 221 221 ASP ASP H A n B 2 233 ARG 233 221 221 ARG ARG H . n B 2 234 ASP 234 222 222 ASP ASP H . n B 2 235 GLY 235 223 223 GLY GLY H . n B 2 236 LYS 236 224 224 LYS LYS H . n B 2 237 TYR 237 225 225 TYR TYR H . n B 2 238 GLY 238 226 226 GLY GLY H . n B 2 239 PHE 239 227 227 PHE PHE H . n B 2 240 TYR 240 228 228 TYR TYR H . n B 2 241 THR 241 229 229 THR THR H . n B 2 242 HIS 242 230 230 HIS HIS H . n B 2 243 VAL 243 231 231 VAL VAL H . n B 2 244 PHE 244 232 232 PHE PHE H . n B 2 245 ARG 245 233 233 ARG ARG H . n B 2 246 LEU 246 234 234 LEU LEU H . n B 2 247 LYS 247 235 235 LYS LYS H . n B 2 248 LYS 248 236 236 LYS LYS H . n B 2 249 TRP 249 237 237 TRP TRP H . n B 2 250 ILE 250 238 238 ILE ILE H . n B 2 251 GLN 251 239 239 GLN GLN H . n B 2 252 LYS 252 240 240 LYS LYS H . n B 2 253 VAL 253 241 241 VAL VAL H . n B 2 254 ILE 254 242 242 ILE ILE H . n B 2 255 ASP 255 243 243 ASP ASP H . n B 2 256 GLN 256 244 244 GLN GLN H . n B 2 257 PHE 257 245 245 PHE PHE H . n B 2 258 GLY 258 246 246 GLY GLY H . n B 2 259 GLU 259 247 ? ? ? H . n C 3 1 DC 1 1 1 DC DC E . n C 3 2 DG 2 2 2 DG DG E . n C 3 3 DC 3 3 3 DC DC E . n C 3 4 DC 4 4 4 DC DC E . n C 3 5 DT 5 5 5 DT DT E . n C 3 6 DA 6 6 6 DA DA E . n C 3 7 DG 7 7 7 DG DG E . n C 3 8 DG 8 8 8 DG DG E . n C 3 9 DT 9 9 9 DT DT E . n C 3 10 DT 10 10 10 DT DT E . n C 3 11 DG 11 11 11 DG DG E . n C 3 12 DG 12 12 12 DG DG E . n C 3 13 DG 13 13 13 DG DG E . n C 3 14 DT 14 14 14 DT DT E . n C 3 15 DA 15 15 15 DA DA E . n C 3 16 DG 16 16 16 DG DG E . n C 3 17 DG 17 17 17 DG DG E . n C 3 18 DG 18 18 18 DG DG E . n C 3 19 DT 19 19 19 DT DT E . n C 3 20 DG 20 20 20 DG DG E . n C 3 21 DG 21 21 21 DG DG E . n C 3 22 DT 22 22 22 DT DT E . n C 3 23 DG 23 23 23 DG DG E . n C 3 24 DG 24 24 24 DG DG E . n C 3 25 DC 25 25 25 DC DC E . n C 3 26 DG 26 26 26 DG DG E . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero D 4 NAG 1 A NAG 1 H NAG 303 n D 4 NAG 2 A NAG 2 H NAG 304 n D 4 BMA 3 A BMA 3 H BMA 305 n D 4 MAN 4 A MAN 4 H MAN 306 n D 4 NAG 5 A NAG 5 H NAG 307 n D 4 GAL 6 A GAL 6 H GAL 308 n D 4 SIA 7 A SIA 7 H SIA 303 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 0G6 1 301 301 0G6 0G6 H . F 6 NA 1 302 302 NA NA H . G 6 NA 1 101 101 NA NA E . H 7 GOL 1 102 301 GOL GOL E . I 8 HOH 1 101 103 HOH HOH L . I 8 HOH 2 102 404 HOH HOH L . I 8 HOH 3 103 112 HOH HOH L . I 8 HOH 4 104 111 HOH HOH L . I 8 HOH 5 105 109 HOH HOH L . I 8 HOH 6 106 113 HOH HOH L . I 8 HOH 7 107 451 HOH HOH L . I 8 HOH 8 108 104 HOH HOH L . I 8 HOH 9 109 477 HOH HOH L . I 8 HOH 10 110 114 HOH HOH L . I 8 HOH 11 111 107 HOH HOH L . I 8 HOH 12 112 105 HOH HOH L . I 8 HOH 13 113 110 HOH HOH L . J 8 HOH 1 401 426 HOH HOH H . J 8 HOH 2 402 474 HOH HOH H . J 8 HOH 3 403 475 HOH HOH H . J 8 HOH 4 404 448 HOH HOH H . J 8 HOH 5 405 409 HOH HOH H . J 8 HOH 6 406 406 HOH HOH H . J 8 HOH 7 407 476 HOH HOH H . J 8 HOH 8 408 472 HOH HOH H . J 8 HOH 9 409 442 HOH HOH H . J 8 HOH 10 410 480 HOH HOH H . J 8 HOH 11 411 412 HOH HOH H . J 8 HOH 12 412 108 HOH HOH H . J 8 HOH 13 413 424 HOH HOH H . J 8 HOH 14 414 461 HOH HOH H . J 8 HOH 15 415 464 HOH HOH H . J 8 HOH 16 416 473 HOH HOH H . J 8 HOH 17 417 414 HOH HOH H . J 8 HOH 18 418 434 HOH HOH H . J 8 HOH 19 419 421 HOH HOH H . J 8 HOH 20 420 416 HOH HOH H . J 8 HOH 21 421 401 HOH HOH H . J 8 HOH 22 422 454 HOH HOH H . J 8 HOH 23 423 438 HOH HOH H . J 8 HOH 24 424 101 HOH HOH H . J 8 HOH 25 425 485 HOH HOH H . J 8 HOH 26 426 469 HOH HOH H . J 8 HOH 27 427 465 HOH HOH H . J 8 HOH 28 428 410 HOH HOH H . J 8 HOH 29 429 408 HOH HOH H . J 8 HOH 30 430 453 HOH HOH H . J 8 HOH 31 431 427 HOH HOH H . J 8 HOH 32 432 422 HOH HOH H . J 8 HOH 33 433 402 HOH HOH H . J 8 HOH 34 434 460 HOH HOH H . J 8 HOH 35 435 484 HOH HOH H . J 8 HOH 36 436 478 HOH HOH H . J 8 HOH 37 437 413 HOH HOH H . J 8 HOH 38 438 471 HOH HOH H . J 8 HOH 39 439 479 HOH HOH H . J 8 HOH 40 440 463 HOH HOH H . J 8 HOH 41 441 449 HOH HOH H . J 8 HOH 42 442 431 HOH HOH H . J 8 HOH 43 443 405 HOH HOH H . J 8 HOH 44 444 419 HOH HOH H . J 8 HOH 45 445 450 HOH HOH H . J 8 HOH 46 446 417 HOH HOH H . J 8 HOH 47 447 462 HOH HOH H . J 8 HOH 48 448 481 HOH HOH H . J 8 HOH 49 449 437 HOH HOH H . J 8 HOH 50 450 435 HOH HOH H . J 8 HOH 51 451 441 HOH HOH H . J 8 HOH 52 452 483 HOH HOH H . J 8 HOH 53 453 458 HOH HOH H . J 8 HOH 54 454 407 HOH HOH H . J 8 HOH 55 455 439 HOH HOH H . J 8 HOH 56 456 403 HOH HOH H . J 8 HOH 57 457 466 HOH HOH H . J 8 HOH 58 458 482 HOH HOH H . J 8 HOH 59 459 446 HOH HOH H . J 8 HOH 60 460 425 HOH HOH H . J 8 HOH 61 461 440 HOH HOH H . J 8 HOH 62 462 490 HOH HOH H . J 8 HOH 63 463 415 HOH HOH H . J 8 HOH 64 464 428 HOH HOH H . J 8 HOH 65 465 444 HOH HOH H . J 8 HOH 66 466 411 HOH HOH H . J 8 HOH 67 467 443 HOH HOH H . J 8 HOH 68 468 433 HOH HOH H . J 8 HOH 69 469 447 HOH HOH H . J 8 HOH 70 470 106 HOH HOH H . J 8 HOH 71 471 488 HOH HOH H . J 8 HOH 72 472 436 HOH HOH H . J 8 HOH 73 473 459 HOH HOH H . J 8 HOH 74 474 429 HOH HOH H . J 8 HOH 75 475 489 HOH HOH H . J 8 HOH 76 476 457 HOH HOH H . J 8 HOH 77 477 432 HOH HOH H . J 8 HOH 78 478 493 HOH HOH H . J 8 HOH 79 479 491 HOH HOH H . J 8 HOH 80 480 487 HOH HOH H . J 8 HOH 81 481 102 HOH HOH H . J 8 HOH 82 482 456 HOH HOH H . J 8 HOH 83 483 452 HOH HOH H . J 8 HOH 84 484 492 HOH HOH H . J 8 HOH 85 485 468 HOH HOH H . J 8 HOH 86 486 486 HOH HOH H . J 8 HOH 87 487 494 HOH HOH H . J 8 HOH 88 488 495 HOH HOH H . J 8 HOH 89 489 455 HOH HOH H . J 8 HOH 90 490 423 HOH HOH H . J 8 HOH 91 491 445 HOH HOH H . J 8 HOH 92 492 467 HOH HOH H . J 8 HOH 93 493 418 HOH HOH H . J 8 HOH 94 494 470 HOH HOH H . J 8 HOH 95 495 430 HOH HOH H . K 8 HOH 1 201 202 HOH HOH E . K 8 HOH 2 202 201 HOH HOH E . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? 'Andrew G.W. Leslie' andrew@mrc-lmb.cam.ac.uk ? ? ? ? ? http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ ? MOSFLM ? ? package . 1 ? 'data scaling' ? ? 'Phil Evans' ? 15/01/18 ? ? ? ? http://www.mrc-lmb.cam.ac.uk/harry/pre/aimless.html ? Aimless ? ? program 0.6.2 2 ? phasing ? ? 'Randy J. Read' cimr-phaser@lists.cam.ac.uk ? ? ? ? ? http://www-structmed.cimr.cam.ac.uk/phaser/ ? PHASER ? ? program . 3 ? refinement ? ? 'Garib N. Murshudov' garib@ysbl.york.ac.uk ? ? ? ? Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html ? REFMAC ? ? program 5.8.0123 4 ? 'data extraction' ? ? PDB deposit@deposit.rcsb.org 'Sep. 1, 2017' ? ? ? C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ ? PDB_EXTRACT ? ? package 3.24 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6GN7 _cell.details ? _cell.formula_units_Z ? _cell.length_a 67.330 _cell.length_a_esd ? _cell.length_b 120.690 _cell.length_b_esd ? _cell.length_c 208.940 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GN7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6GN7 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 5.05 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 75.63 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'Tacsimate 50 % v/v, pH 7.0' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 2M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-07-25 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9677 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE MASSIF-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9677 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline MASSIF-1 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6GN7 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.800 _reflns.d_resolution_low 104.5100 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 21199 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.000 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.000 _reflns.pdbx_Rmerge_I_obs 0.074 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.400 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.086 _reflns.pdbx_Rpim_I_all 0.042 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.988 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.800 2.950 ? ? ? ? ? ? 3047 99.400 ? ? ? ? 0.368 ? ? ? ? ? ? ? ? 4.200 ? ? ? ? 0.425 0.208 ? 1 1 0.913 ? 8.850 64.080 ? ? ? ? ? ? 753 99.000 ? ? ? ? 0.039 ? ? ? ? ? ? ? ? 4.300 ? ? ? ? 0.046 0.022 ? 2 1 0.963 ? # _refine.aniso_B[1][1] -4.2400 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][2] -0.6500 _refine.aniso_B[2][3] -0.0000 _refine.aniso_B[3][3] 4.8900 _refine.B_iso_max 185.810 _refine.B_iso_mean 52.1460 _refine.B_iso_min 17.580 _refine.correlation_coeff_Fo_to_Fc 0.9590 _refine.correlation_coeff_Fo_to_Fc_free 0.9370 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6GN7 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.8000 _refine.ls_d_res_low 104.5100 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 20089 _refine.ls_number_reflns_R_free 1107 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.8300 _refine.ls_percent_reflns_R_free 5.2000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1611 _refine.ls_R_factor_R_free 0.2030 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1589 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1PPB _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.2940 _refine.pdbx_overall_ESU_R_Free 0.2300 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 8.4240 _refine.overall_SU_ML 0.1620 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.8000 _refine_hist.d_res_low 104.5100 _refine_hist.pdbx_number_atoms_ligand 133 _refine_hist.number_atoms_solvent 110 _refine_hist.number_atoms_total 3132 _refine_hist.pdbx_number_residues_total 317 _refine_hist.pdbx_B_iso_mean_ligand 96.46 _refine_hist.pdbx_B_iso_mean_solvent 42.65 _refine_hist.pdbx_number_atoms_protein 2346 _refine_hist.pdbx_number_atoms_nucleic_acid 543 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.006 0.018 3173 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.000 0.020 2701 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.178 1.831 4417 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.737 3.000 6264 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 3.369 5.000 291 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 26.277 23.043 115 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 10.885 15.000 434 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 10.135 15.000 22 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.076 0.200 455 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 0.021 3093 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.000 0.020 719 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.8000 _refine_ls_shell.d_res_low 2.8730 _refine_ls_shell.number_reflns_all 1531 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 89 _refine_ls_shell.number_reflns_R_work 1442 _refine_ls_shell.percent_reflns_obs 99.0300 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3010 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2800 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6GN7 _struct.title ;X-ray structure of the complex between human alpha thrombin and NU172, a duplex/quadruplex 26-mer DNA aptamer, in the presence of sodium ions. ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6GN7 _struct_keywords.text 'Thrombin-DNA, G-quadruplex, Aptamer, Duplex/Quadruplex, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 7 ? I N N 8 ? J N N 8 ? K N N 8 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP THRB_HUMAN P00734 ? 1 TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR 328 2 UNP THRB_HUMAN P00734 ? 2 ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; 364 3 PDB 6GN7 6GN7 ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6GN7 L 1 H 36 ? P00734 328 ? 363 ? 1 17 2 2 6GN7 H 1 ? 259 ? P00734 364 ? 622 ? 16 247 3 3 6GN7 E 1 ? 26 ? 6GN7 1 ? 26 ? 1 26 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5360 ? 1 MORE -3 ? 1 'SSA (A^2)' 17380 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PHE A 15 ? SER A 19 ? PHE L 7 SER L 11 5 ? 5 HELX_P HELX_P2 AA2 THR A 24 B TYR A 32 J THR L 14 TYR L 14 1 ? 9 HELX_P HELX_P3 AA3 ALA B 41 ? CYS B 44 ? ALA H 55 CYS H 58 5 ? 4 HELX_P HELX_P4 AA4 PRO B 48 B ASP B 51 E PRO H 60 ASP H 60 5 ? 4 HELX_P HELX_P5 AA5 THR B 55 I ASN B 57 ? THR H 60 ASN H 62 5 ? 3 HELX_P HELX_P6 AA6 ASP B 122 ? LEU B 130 ? ASP H 125 LEU H 130 1 ? 9 HELX_P HELX_P7 AA7 GLU B 169 ? SER B 176 ? GLU H 164 SER H 171 1 ? 8 HELX_P HELX_P8 AA8 LEU B 246 ? GLN B 256 ? LEU H 234 GLN H 244 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 9 SG ? ? ? 1_555 B CYS 119 SG ? ? L CYS 1 H CYS 122 1_555 ? ? ? ? ? ? ? 2.063 ? ? disulf2 disulf ? ? B CYS 28 SG ? ? ? 1_555 B CYS 44 SG ? ? H CYS 42 H CYS 58 1_555 ? ? ? ? ? ? ? 2.047 ? ? disulf3 disulf ? ? B CYS 173 SG ? ? ? 1_555 B CYS 187 SG ? ? H CYS 168 H CYS 182 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf4 disulf ? ? B CYS 201 SG ? ? ? 1_555 B CYS 231 SG ? ? H CYS 191 H CYS 220 1_555 ? ? ? ? ? ? ? 2.035 ? ? covale1 covale one ? B HIS 43 NE2 ? ? ? 1_555 E 0G6 . C3 ? ? H HIS 57 H 0G6 301 1_555 ? ? ? ? ? ? ? 1.474 ? ? covale2 covale one ? B ASN 53 ND2 ? G ? 1_555 D NAG . C1 ? ? H ASN 60 A NAG 1 1_555 ? ? ? ? ? ? ? 1.439 ? N-Glycosylation covale3 covale none ? B SER 205 OG ? ? ? 1_555 E 0G6 . C2 ? ? H SER 195 H 0G6 301 1_555 ? ? ? ? ? ? ? 1.421 ? ? covale4 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? A NAG 1 A NAG 2 1_555 ? ? ? ? ? ? ? 1.442 ? ? covale5 covale both ? D NAG . O4 ? ? ? 1_555 D BMA . C1 ? ? A NAG 2 A BMA 3 1_555 ? ? ? ? ? ? ? 1.442 ? ? covale6 covale both ? D BMA . O6 ? ? ? 1_555 D MAN . C1 ? ? A BMA 3 A MAN 4 1_555 ? ? ? ? ? ? ? 1.441 ? ? covale7 covale both ? D MAN . O2 ? ? ? 1_555 D NAG . C1 ? ? A MAN 4 A NAG 5 1_555 ? ? ? ? ? ? ? 1.445 ? ? covale8 covale both ? D NAG . O4 ? ? ? 1_555 D GAL . C1 ? ? A NAG 5 A GAL 6 1_555 ? ? ? ? ? ? ? 1.450 ? ? covale9 covale both ? D GAL . O6 ? ? ? 1_555 D SIA . C2 ? ? A GAL 6 A SIA 7 1_555 ? ? ? ? ? ? ? 1.343 ? ? metalc1 metalc ? ? B ARG 233 O ? ? ? 1_555 F NA . NA ? ? H ARG 221 H NA 302 1_555 ? ? ? ? ? ? ? 2.071 ? ? metalc2 metalc ? ? B LYS 236 O ? ? ? 1_555 F NA . NA ? ? H LYS 224 H NA 302 1_555 ? ? ? ? ? ? ? 2.189 ? ? metalc3 metalc ? ? F NA . NA ? ? ? 1_555 J HOH . O ? ? H NA 302 H HOH 428 1_555 ? ? ? ? ? ? ? 2.686 ? ? metalc4 metalc ? ? F NA . NA ? ? ? 1_555 J HOH . O ? ? H NA 302 H HOH 451 1_555 ? ? ? ? ? ? ? 2.716 ? ? metalc5 metalc ? ? F NA . NA ? ? ? 1_555 J HOH . O ? ? H NA 302 H HOH 461 1_555 ? ? ? ? ? ? ? 2.165 ? ? metalc6 metalc ? ? F NA . NA ? ? ? 1_555 J HOH . O ? ? H NA 302 H HOH 468 1_555 ? ? ? ? ? ? ? 2.234 ? ? metalc7 metalc ? ? C DG 7 O6 ? ? ? 1_555 G NA . NA ? ? E DG 7 E NA 101 1_555 ? ? ? ? ? ? ? 2.463 ? ? metalc8 metalc ? ? C DG 8 O6 ? ? ? 1_555 G NA . NA ? ? E DG 8 E NA 101 1_555 ? ? ? ? ? ? ? 2.693 ? ? metalc9 metalc ? ? C DG 11 O6 ? ? ? 1_555 G NA . NA ? ? E DG 11 E NA 101 1_555 ? ? ? ? ? ? ? 2.487 ? ? metalc10 metalc ? ? C DG 12 O6 ? ? ? 1_555 G NA . NA ? ? E DG 12 E NA 101 1_555 ? ? ? ? ? ? ? 2.251 ? ? metalc11 metalc ? ? C DG 16 O6 ? ? ? 1_555 G NA . NA ? ? E DG 16 E NA 101 1_555 ? ? ? ? ? ? ? 2.379 ? ? metalc12 metalc ? ? C DG 17 O6 ? ? ? 1_555 G NA . NA ? ? E DG 17 E NA 101 1_555 ? ? ? ? ? ? ? 2.828 ? ? metalc13 metalc ? ? C DG 20 O6 ? ? ? 1_555 G NA . NA ? ? E DG 20 E NA 101 1_555 ? ? ? ? ? ? ? 2.678 ? ? metalc14 metalc ? ? C DG 21 O6 ? ? ? 1_555 G NA . NA ? ? E DG 21 E NA 101 1_555 ? ? ? ? ? ? ? 2.523 ? ? hydrog1 hydrog ? ? C DC 1 N3 ? ? ? 1_555 C DG 26 N2 ? ? E DC 1 E DG 26 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog2 hydrog ? ? C DC 1 O2 ? ? ? 1_555 C DG 26 N1 ? ? E DC 1 E DG 26 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog3 hydrog ? ? C DG 2 N1 ? ? ? 1_555 C DC 25 N3 ? ? E DG 2 E DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DG 2 N2 ? ? ? 1_555 C DC 25 O2 ? ? E DG 2 E DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DG 2 O6 ? ? ? 1_555 C DC 25 N4 ? ? E DG 2 E DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DC 3 N3 ? ? ? 1_555 C DG 24 N1 ? ? E DC 3 E DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DC 3 N4 ? ? ? 1_555 C DG 24 O6 ? ? E DC 3 E DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DC 3 O2 ? ? ? 1_555 C DG 24 N2 ? ? E DC 3 E DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DC 4 N3 ? ? ? 1_555 C DG 23 N1 ? ? E DC 4 E DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DC 4 N4 ? ? ? 1_555 C DG 23 O6 ? ? E DC 4 E DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DC 4 O2 ? ? ? 1_555 C DG 23 N2 ? ? E DC 4 E DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DT 5 N3 ? ? ? 1_555 C DA 15 N7 ? ? E DT 5 E DA 15 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog13 hydrog ? ? C DT 5 O2 ? ? ? 1_555 C DA 15 N6 ? ? E DT 5 E DA 15 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog14 hydrog ? ? C DA 6 N6 ? ? ? 1_555 C DT 14 O2 ? ? E DA 6 E DT 14 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog15 hydrog ? ? C DA 6 N7 ? ? ? 1_555 C DT 14 N3 ? ? E DA 6 E DT 14 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog16 hydrog ? ? C DA 6 N1 ? ? ? 1_555 C DT 22 N3 ? ? E DA 6 E DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DA 6 N6 ? ? ? 1_555 C DT 22 O4 ? ? E DA 6 E DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DG 7 N1 ? ? ? 1_555 C DG 12 O6 ? ? E DG 7 E DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? C DG 7 N2 ? ? ? 1_555 C DG 12 N7 ? ? E DG 7 E DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? C DG 7 N7 ? ? ? 1_555 C DG 21 N2 ? ? E DG 7 E DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? C DG 7 O6 ? ? ? 1_555 C DG 21 N1 ? ? E DG 7 E DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? C DG 8 N7 ? ? ? 1_555 C DG 11 N2 ? ? E DG 8 E DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? C DG 8 O6 ? ? ? 1_555 C DG 11 N1 ? ? E DG 8 E DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? C DG 8 N1 ? ? ? 1_555 C DG 20 O6 ? ? E DG 8 E DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? C DG 8 N2 ? ? ? 1_555 C DG 20 N7 ? ? E DG 8 E DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? C DG 11 N7 ? ? ? 1_555 C DG 17 N2 ? ? E DG 11 E DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? C DG 11 O6 ? ? ? 1_555 C DG 17 N1 ? ? E DG 11 E DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog28 hydrog ? ? C DG 12 N1 ? ? ? 1_555 C DG 16 O6 ? ? E DG 12 E DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog29 hydrog ? ? C DG 12 N2 ? ? ? 1_555 C DG 16 N7 ? ? E DG 12 E DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog30 hydrog ? ? C DG 13 N1 ? ? ? 1_555 C DG 18 O6 ? ? E DG 13 E DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog31 hydrog ? ? C DG 13 N2 ? ? ? 1_555 C DG 18 N7 ? ? E DG 13 E DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog32 hydrog ? ? C DG 16 N1 ? ? ? 1_555 C DG 21 O6 ? ? E DG 16 E DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog33 hydrog ? ? C DG 16 N2 ? ? ? 1_555 C DG 21 N7 ? ? E DG 16 E DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog34 hydrog ? ? C DG 17 N7 ? ? ? 1_555 C DG 20 N2 ? ? E DG 17 E DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog35 hydrog ? ? C DG 17 O6 ? ? ? 1_555 C DG 20 N1 ? ? E DG 17 E DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? B ARG 233 ? H ARG 221 ? 1_555 NA ? F NA . ? H NA 302 ? 1_555 O ? B LYS 236 ? H LYS 224 ? 1_555 102.0 ? 2 O ? B ARG 233 ? H ARG 221 ? 1_555 NA ? F NA . ? H NA 302 ? 1_555 O ? J HOH . ? H HOH 428 ? 1_555 171.0 ? 3 O ? B LYS 236 ? H LYS 224 ? 1_555 NA ? F NA . ? H NA 302 ? 1_555 O ? J HOH . ? H HOH 428 ? 1_555 73.6 ? 4 O ? B ARG 233 ? H ARG 221 ? 1_555 NA ? F NA . ? H NA 302 ? 1_555 O ? J HOH . ? H HOH 451 ? 1_555 94.6 ? 5 O ? B LYS 236 ? H LYS 224 ? 1_555 NA ? F NA . ? H NA 302 ? 1_555 O ? J HOH . ? H HOH 451 ? 1_555 100.9 ? 6 O ? J HOH . ? H HOH 428 ? 1_555 NA ? F NA . ? H NA 302 ? 1_555 O ? J HOH . ? H HOH 451 ? 1_555 78.8 ? 7 O ? B ARG 233 ? H ARG 221 ? 1_555 NA ? F NA . ? H NA 302 ? 1_555 O ? J HOH . ? H HOH 461 ? 1_555 106.3 ? 8 O ? B LYS 236 ? H LYS 224 ? 1_555 NA ? F NA . ? H NA 302 ? 1_555 O ? J HOH . ? H HOH 461 ? 1_555 149.9 ? 9 O ? J HOH . ? H HOH 428 ? 1_555 NA ? F NA . ? H NA 302 ? 1_555 O ? J HOH . ? H HOH 461 ? 1_555 79.7 ? 10 O ? J HOH . ? H HOH 451 ? 1_555 NA ? F NA . ? H NA 302 ? 1_555 O ? J HOH . ? H HOH 461 ? 1_555 87.1 ? 11 O ? B ARG 233 ? H ARG 221 ? 1_555 NA ? F NA . ? H NA 302 ? 1_555 O ? J HOH . ? H HOH 468 ? 1_555 108.6 ? 12 O ? B LYS 236 ? H LYS 224 ? 1_555 NA ? F NA . ? H NA 302 ? 1_555 O ? J HOH . ? H HOH 468 ? 1_555 84.3 ? 13 O ? J HOH . ? H HOH 428 ? 1_555 NA ? F NA . ? H NA 302 ? 1_555 O ? J HOH . ? H HOH 468 ? 1_555 79.1 ? 14 O ? J HOH . ? H HOH 451 ? 1_555 NA ? F NA . ? H NA 302 ? 1_555 O ? J HOH . ? H HOH 468 ? 1_555 154.7 ? 15 O ? J HOH . ? H HOH 461 ? 1_555 NA ? F NA . ? H NA 302 ? 1_555 O ? J HOH . ? H HOH 468 ? 1_555 77.1 ? 16 O6 ? C DG 7 ? E DG 7 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 8 ? E DG 8 ? 1_555 68.3 ? 17 O6 ? C DG 7 ? E DG 7 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 11 ? E DG 11 ? 1_555 125.2 ? 18 O6 ? C DG 8 ? E DG 8 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 11 ? E DG 11 ? 1_555 67.3 ? 19 O6 ? C DG 7 ? E DG 7 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 12 ? E DG 12 ? 1_555 82.0 ? 20 O6 ? C DG 8 ? E DG 8 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 12 ? E DG 12 ? 1_555 107.2 ? 21 O6 ? C DG 11 ? E DG 11 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 12 ? E DG 12 ? 1_555 82.0 ? 22 O6 ? C DG 7 ? E DG 7 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 16 ? E DG 16 ? 1_555 113.7 ? 23 O6 ? C DG 8 ? E DG 8 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 16 ? E DG 16 ? 1_555 178.0 ? 24 O6 ? C DG 11 ? E DG 11 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 16 ? E DG 16 ? 1_555 110.8 ? 25 O6 ? C DG 12 ? E DG 12 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 16 ? E DG 16 ? 1_555 73.1 ? 26 O6 ? C DG 7 ? E DG 7 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 17 ? E DG 17 ? 1_555 157.4 ? 27 O6 ? C DG 8 ? E DG 8 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 17 ? E DG 17 ? 1_555 100.6 ? 28 O6 ? C DG 11 ? E DG 11 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 17 ? E DG 17 ? 1_555 62.1 ? 29 O6 ? C DG 12 ? E DG 12 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 17 ? E DG 17 ? 1_555 120.5 ? 30 O6 ? C DG 16 ? E DG 16 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 17 ? E DG 17 ? 1_555 77.6 ? 31 O6 ? C DG 7 ? E DG 7 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 20 ? E DG 20 ? 1_555 95.2 ? 32 O6 ? C DG 8 ? E DG 8 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 20 ? E DG 20 ? 1_555 61.3 ? 33 O6 ? C DG 11 ? E DG 11 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 20 ? E DG 20 ? 1_555 90.4 ? 34 O6 ? C DG 12 ? E DG 12 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 20 ? E DG 20 ? 1_555 168.2 ? 35 O6 ? C DG 16 ? E DG 16 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 20 ? E DG 20 ? 1_555 118.3 ? 36 O6 ? C DG 17 ? E DG 17 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 20 ? E DG 20 ? 1_555 62.4 ? 37 O6 ? C DG 7 ? E DG 7 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 21 ? E DG 21 ? 1_555 66.4 ? 38 O6 ? C DG 8 ? E DG 8 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 21 ? E DG 21 ? 1_555 107.2 ? 39 O6 ? C DG 11 ? E DG 11 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 21 ? E DG 21 ? 1_555 158.7 ? 40 O6 ? C DG 12 ? E DG 12 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 21 ? E DG 21 ? 1_555 118.8 ? 41 O6 ? C DG 16 ? E DG 16 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 21 ? E DG 21 ? 1_555 74.2 ? 42 O6 ? C DG 17 ? E DG 17 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 21 ? E DG 21 ? 1_555 100.5 ? 43 O6 ? C DG 20 ? E DG 20 ? 1_555 NA ? G NA . ? E NA 101 ? 1_555 O6 ? C DG 21 ? E DG 21 ? 1_555 69.7 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 22 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code A _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 36 _struct_mon_prot_cis.auth_asym_id H _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 23 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 37 _struct_mon_prot_cis.pdbx_auth_asym_id_2 H _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -1.60 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 7 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER B 5 ? ASP B 6 ? SER H 20 ASP H 21 AA1 2 GLN B 161 ? PRO B 166 ? GLN H 156 PRO H 161 AA1 3 LYS B 135 ? GLY B 140 ? LYS H 135 GLY H 140 AA1 4 PRO B 208 ? LYS B 212 ? PRO H 198 LYS H 202 AA1 5 TRP B 219 ? TRP B 227 ? TRP H 207 TRP H 215 AA1 6 GLY B 238 ? HIS B 242 ? GLY H 226 HIS H 230 AA1 7 MET B 185 ? ALA B 188 ? MET H 180 ALA H 183 AA2 1 LYS B 77 ? SER B 79 ? LYS H 81 SER H 83 AA2 2 LEU B 59 ? ILE B 63 ? LEU H 64 ILE H 68 AA2 3 GLN B 15 ? ARG B 20 ? GLN H 30 ARG H 35 AA2 4 GLU B 25 ? LEU B 32 ? GLU H 39 LEU H 46 AA2 5 TRP B 37 ? THR B 40 ? TRP H 51 THR H 54 AA2 6 ALA B 101 ? LEU B 105 ? ALA H 104 LEU H 108 AA2 7 LEU B 81 ? ILE B 86 ? LEU H 85 ILE H 90 AA3 1 LEU B 46 ? TYR B 47 A LEU H 60 TYR H 60 AA3 2 LYS B 52 F ASN B 53 G LYS H 60 ASN H 60 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N SER B 5 ? N SER H 20 O VAL B 162 ? O VAL H 157 AA1 2 3 O VAL B 163 ? O VAL H 158 N VAL B 138 ? N VAL H 138 AA1 3 4 N ARG B 137 ? N ARG H 137 O VAL B 210 ? O VAL H 200 AA1 4 5 N MET B 211 ? N MET H 201 O TYR B 220 ? O TYR H 208 AA1 5 6 N TRP B 227 ? N TRP H 215 O PHE B 239 ? O PHE H 227 AA1 6 7 O TYR B 240 ? O TYR H 228 N PHE B 186 ? N PHE H 181 AA2 1 2 O LYS B 77 ? O LYS H 81 N ILE B 63 ? N ILE H 68 AA2 2 3 O ARG B 62 ? O ARG H 67 N MET B 17 ? N MET H 32 AA2 3 4 N LEU B 18 ? N LEU H 33 O CYS B 28 ? O CYS H 42 AA2 4 5 N SER B 31 ? N SER H 45 O LEU B 39 ? O LEU H 53 AA2 5 6 N THR B 40 ? N THR H 54 O ALA B 101 ? O ALA H 104 AA2 6 7 O LEU B 102 ? O LEU H 105 N TYR B 85 ? N TYR H 89 AA3 1 2 N TYR B 47 A N TYR H 60 O LYS B 52 F O LYS H 60 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NH2 H ARG 77 A B "O4'" E DG 20 ? ? 1.98 2 1 O6 A GAL 6 ? ? C3 A SIA 7 ? ? 2.05 3 1 O H HOH 466 ? ? O H HOH 485 ? ? 2.06 4 1 O2 E DC 1 ? ? N2 E DG 26 ? ? 2.16 5 1 NH1 H ARG 75 ? ? O6 E DG 13 ? ? 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE L 7 ? ? -139.53 -83.64 2 1 SER L 11 ? ? 39.61 48.66 3 1 TYR H 60 A ? -150.68 82.84 4 1 PRO H 60 C ? -48.79 -15.28 5 1 ASN H 60 G ? -162.91 77.03 6 1 HIS H 71 ? ? -143.64 -51.00 7 1 ILE H 79 ? ? -141.92 -55.37 8 1 GLU H 97 A ? -123.33 -94.50 9 1 SER H 115 ? ? -169.31 -168.94 10 1 ASN H 204 B ? -156.18 10.38 # _pdbx_molecule_features.prd_id PRD_000020 _pdbx_molecule_features.name D-Phe-Pro-Arg-CH2Cl _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000020 _pdbx_molecule.asym_id E # _phasing.method MR # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 L ASP 15 ? A ASP 34 2 1 Y 1 L GLY 16 ? A GLY 35 3 1 Y 1 L ARG 17 ? A ARG 36 4 1 Y 1 H GLU 247 ? B GLU 259 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 0G6 N N N N 1 0G6 CA C N R 2 0G6 C C N N 3 0G6 O O N N 4 0G6 CB C N N 5 0G6 CG C Y N 6 0G6 CD1 C Y N 7 0G6 CD2 C Y N 8 0G6 CE1 C Y N 9 0G6 CE2 C Y N 10 0G6 CZ C Y N 11 0G6 N1 N N N 12 0G6 CA1 C N S 13 0G6 C1 C N N 14 0G6 O1 O N N 15 0G6 CB1 C N N 16 0G6 CG1 C N N 17 0G6 CD C N N 18 0G6 N2 N N N 19 0G6 CA2 C N S 20 0G6 C2 C N S 21 0G6 O2 O N N 22 0G6 CB2 C N N 23 0G6 CG2 C N N 24 0G6 CD3 C N N 25 0G6 NE N N N 26 0G6 CZ1 C N N 27 0G6 NH1 N N N 28 0G6 NH2 N N N 29 0G6 C3 C N N 30 0G6 CL CL N N 31 0G6 H H N N 32 0G6 H2 H N N 33 0G6 HA H N N 34 0G6 HB2 H N N 35 0G6 HB3 H N N 36 0G6 HD1 H N N 37 0G6 HD2 H N N 38 0G6 HE1 H N N 39 0G6 HE2 H N N 40 0G6 HZ H N N 41 0G6 HA1 H N N 42 0G6 HB21 H N N 43 0G6 HB31 H N N 44 0G6 HG2 H N N 45 0G6 HG3 H N N 46 0G6 HD21 H N N 47 0G6 HD3 H N N 48 0G6 H1 H N N 49 0G6 HA2 H N N 50 0G6 HB22 H N N 51 0G6 HB32 H N N 52 0G6 HG21 H N N 53 0G6 HG31 H N N 54 0G6 HD22 H N N 55 0G6 HD31 H N N 56 0G6 HE H N N 57 0G6 HH11 H N N 58 0G6 HH12 H N N 59 0G6 HH21 H N N 60 0G6 HH22 H N N 61 0G6 H11 H N N 62 0G6 H21 H N N 63 0G6 H33 H N N 64 0G6 H34 H N N 65 ALA N N N N 66 ALA CA C N S 67 ALA C C N N 68 ALA O O N N 69 ALA CB C N N 70 ALA OXT O N N 71 ALA H H N N 72 ALA H2 H N N 73 ALA HA H N N 74 ALA HB1 H N N 75 ALA HB2 H N N 76 ALA HB3 H N N 77 ALA HXT H N N 78 ARG N N N N 79 ARG CA C N S 80 ARG C C N N 81 ARG O O N N 82 ARG CB C N N 83 ARG CG C N N 84 ARG CD C N N 85 ARG NE N N N 86 ARG CZ C N N 87 ARG NH1 N N N 88 ARG NH2 N N N 89 ARG OXT O N N 90 ARG H H N N 91 ARG H2 H N N 92 ARG HA H N N 93 ARG HB2 H N N 94 ARG HB3 H N N 95 ARG HG2 H N N 96 ARG HG3 H N N 97 ARG HD2 H N N 98 ARG HD3 H N N 99 ARG HE H N N 100 ARG HH11 H N N 101 ARG HH12 H N N 102 ARG HH21 H N N 103 ARG HH22 H N N 104 ARG HXT H N N 105 ASN N N N N 106 ASN CA C N S 107 ASN C C N N 108 ASN O O N N 109 ASN CB C N N 110 ASN CG C N N 111 ASN OD1 O N N 112 ASN ND2 N N N 113 ASN OXT O N N 114 ASN H H N N 115 ASN H2 H N N 116 ASN HA H N N 117 ASN HB2 H N N 118 ASN HB3 H N N 119 ASN HD21 H N N 120 ASN HD22 H N N 121 ASN HXT H N N 122 ASP N N N N 123 ASP CA C N S 124 ASP C C N N 125 ASP O O N N 126 ASP CB C N N 127 ASP CG C N N 128 ASP OD1 O N N 129 ASP OD2 O N N 130 ASP OXT O N N 131 ASP H H N N 132 ASP H2 H N N 133 ASP HA H N N 134 ASP HB2 H N N 135 ASP HB3 H N N 136 ASP HD2 H N N 137 ASP HXT H N N 138 BMA C1 C N R 139 BMA C2 C N S 140 BMA C3 C N S 141 BMA C4 C N S 142 BMA C5 C N R 143 BMA C6 C N N 144 BMA O1 O N N 145 BMA O2 O N N 146 BMA O3 O N N 147 BMA O4 O N N 148 BMA O5 O N N 149 BMA O6 O N N 150 BMA H1 H N N 151 BMA H2 H N N 152 BMA H3 H N N 153 BMA H4 H N N 154 BMA H5 H N N 155 BMA H61 H N N 156 BMA H62 H N N 157 BMA HO1 H N N 158 BMA HO2 H N N 159 BMA HO3 H N N 160 BMA HO4 H N N 161 BMA HO6 H N N 162 CYS N N N N 163 CYS CA C N R 164 CYS C C N N 165 CYS O O N N 166 CYS CB C N N 167 CYS SG S N N 168 CYS OXT O N N 169 CYS H H N N 170 CYS H2 H N N 171 CYS HA H N N 172 CYS HB2 H N N 173 CYS HB3 H N N 174 CYS HG H N N 175 CYS HXT H N N 176 DA OP3 O N N 177 DA P P N N 178 DA OP1 O N N 179 DA OP2 O N N 180 DA "O5'" O N N 181 DA "C5'" C N N 182 DA "C4'" C N R 183 DA "O4'" O N N 184 DA "C3'" C N S 185 DA "O3'" O N N 186 DA "C2'" C N N 187 DA "C1'" C N R 188 DA N9 N Y N 189 DA C8 C Y N 190 DA N7 N Y N 191 DA C5 C Y N 192 DA C6 C Y N 193 DA N6 N N N 194 DA N1 N Y N 195 DA C2 C Y N 196 DA N3 N Y N 197 DA C4 C Y N 198 DA HOP3 H N N 199 DA HOP2 H N N 200 DA "H5'" H N N 201 DA "H5''" H N N 202 DA "H4'" H N N 203 DA "H3'" H N N 204 DA "HO3'" H N N 205 DA "H2'" H N N 206 DA "H2''" H N N 207 DA "H1'" H N N 208 DA H8 H N N 209 DA H61 H N N 210 DA H62 H N N 211 DA H2 H N N 212 DC OP3 O N N 213 DC P P N N 214 DC OP1 O N N 215 DC OP2 O N N 216 DC "O5'" O N N 217 DC "C5'" C N N 218 DC "C4'" C N R 219 DC "O4'" O N N 220 DC "C3'" C N S 221 DC "O3'" O N N 222 DC "C2'" C N N 223 DC "C1'" C N R 224 DC N1 N N N 225 DC C2 C N N 226 DC O2 O N N 227 DC N3 N N N 228 DC C4 C N N 229 DC N4 N N N 230 DC C5 C N N 231 DC C6 C N N 232 DC HOP3 H N N 233 DC HOP2 H N N 234 DC "H5'" H N N 235 DC "H5''" H N N 236 DC "H4'" H N N 237 DC "H3'" H N N 238 DC "HO3'" H N N 239 DC "H2'" H N N 240 DC "H2''" H N N 241 DC "H1'" H N N 242 DC H41 H N N 243 DC H42 H N N 244 DC H5 H N N 245 DC H6 H N N 246 DG OP3 O N N 247 DG P P N N 248 DG OP1 O N N 249 DG OP2 O N N 250 DG "O5'" O N N 251 DG "C5'" C N N 252 DG "C4'" C N R 253 DG "O4'" O N N 254 DG "C3'" C N S 255 DG "O3'" O N N 256 DG "C2'" C N N 257 DG "C1'" C N R 258 DG N9 N Y N 259 DG C8 C Y N 260 DG N7 N Y N 261 DG C5 C Y N 262 DG C6 C N N 263 DG O6 O N N 264 DG N1 N N N 265 DG C2 C N N 266 DG N2 N N N 267 DG N3 N N N 268 DG C4 C Y N 269 DG HOP3 H N N 270 DG HOP2 H N N 271 DG "H5'" H N N 272 DG "H5''" H N N 273 DG "H4'" H N N 274 DG "H3'" H N N 275 DG "HO3'" H N N 276 DG "H2'" H N N 277 DG "H2''" H N N 278 DG "H1'" H N N 279 DG H8 H N N 280 DG H1 H N N 281 DG H21 H N N 282 DG H22 H N N 283 DT OP3 O N N 284 DT P P N N 285 DT OP1 O N N 286 DT OP2 O N N 287 DT "O5'" O N N 288 DT "C5'" C N N 289 DT "C4'" C N R 290 DT "O4'" O N N 291 DT "C3'" C N S 292 DT "O3'" O N N 293 DT "C2'" C N N 294 DT "C1'" C N R 295 DT N1 N N N 296 DT C2 C N N 297 DT O2 O N N 298 DT N3 N N N 299 DT C4 C N N 300 DT O4 O N N 301 DT C5 C N N 302 DT C7 C N N 303 DT C6 C N N 304 DT HOP3 H N N 305 DT HOP2 H N N 306 DT "H5'" H N N 307 DT "H5''" H N N 308 DT "H4'" H N N 309 DT "H3'" H N N 310 DT "HO3'" H N N 311 DT "H2'" H N N 312 DT "H2''" H N N 313 DT "H1'" H N N 314 DT H3 H N N 315 DT H71 H N N 316 DT H72 H N N 317 DT H73 H N N 318 DT H6 H N N 319 GAL C1 C N R 320 GAL C2 C N R 321 GAL C3 C N S 322 GAL C4 C N R 323 GAL C5 C N R 324 GAL C6 C N N 325 GAL O1 O N N 326 GAL O2 O N N 327 GAL O3 O N N 328 GAL O4 O N N 329 GAL O5 O N N 330 GAL O6 O N N 331 GAL H1 H N N 332 GAL H2 H N N 333 GAL H3 H N N 334 GAL H4 H N N 335 GAL H5 H N N 336 GAL H61 H N N 337 GAL H62 H N N 338 GAL HO1 H N N 339 GAL HO2 H N N 340 GAL HO3 H N N 341 GAL HO4 H N N 342 GAL HO6 H N N 343 GLN N N N N 344 GLN CA C N S 345 GLN C C N N 346 GLN O O N N 347 GLN CB C N N 348 GLN CG C N N 349 GLN CD C N N 350 GLN OE1 O N N 351 GLN NE2 N N N 352 GLN OXT O N N 353 GLN H H N N 354 GLN H2 H N N 355 GLN HA H N N 356 GLN HB2 H N N 357 GLN HB3 H N N 358 GLN HG2 H N N 359 GLN HG3 H N N 360 GLN HE21 H N N 361 GLN HE22 H N N 362 GLN HXT H N N 363 GLU N N N N 364 GLU CA C N S 365 GLU C C N N 366 GLU O O N N 367 GLU CB C N N 368 GLU CG C N N 369 GLU CD C N N 370 GLU OE1 O N N 371 GLU OE2 O N N 372 GLU OXT O N N 373 GLU H H N N 374 GLU H2 H N N 375 GLU HA H N N 376 GLU HB2 H N N 377 GLU HB3 H N N 378 GLU HG2 H N N 379 GLU HG3 H N N 380 GLU HE2 H N N 381 GLU HXT H N N 382 GLY N N N N 383 GLY CA C N N 384 GLY C C N N 385 GLY O O N N 386 GLY OXT O N N 387 GLY H H N N 388 GLY H2 H N N 389 GLY HA2 H N N 390 GLY HA3 H N N 391 GLY HXT H N N 392 GOL C1 C N N 393 GOL O1 O N N 394 GOL C2 C N N 395 GOL O2 O N N 396 GOL C3 C N N 397 GOL O3 O N N 398 GOL H11 H N N 399 GOL H12 H N N 400 GOL HO1 H N N 401 GOL H2 H N N 402 GOL HO2 H N N 403 GOL H31 H N N 404 GOL H32 H N N 405 GOL HO3 H N N 406 HIS N N N N 407 HIS CA C N S 408 HIS C C N N 409 HIS O O N N 410 HIS CB C N N 411 HIS CG C Y N 412 HIS ND1 N Y N 413 HIS CD2 C Y N 414 HIS CE1 C Y N 415 HIS NE2 N Y N 416 HIS OXT O N N 417 HIS H H N N 418 HIS H2 H N N 419 HIS HA H N N 420 HIS HB2 H N N 421 HIS HB3 H N N 422 HIS HD1 H N N 423 HIS HD2 H N N 424 HIS HE1 H N N 425 HIS HE2 H N N 426 HIS HXT H N N 427 HOH O O N N 428 HOH H1 H N N 429 HOH H2 H N N 430 ILE N N N N 431 ILE CA C N S 432 ILE C C N N 433 ILE O O N N 434 ILE CB C N S 435 ILE CG1 C N N 436 ILE CG2 C N N 437 ILE CD1 C N N 438 ILE OXT O N N 439 ILE H H N N 440 ILE H2 H N N 441 ILE HA H N N 442 ILE HB H N N 443 ILE HG12 H N N 444 ILE HG13 H N N 445 ILE HG21 H N N 446 ILE HG22 H N N 447 ILE HG23 H N N 448 ILE HD11 H N N 449 ILE HD12 H N N 450 ILE HD13 H N N 451 ILE HXT H N N 452 LEU N N N N 453 LEU CA C N S 454 LEU C C N N 455 LEU O O N N 456 LEU CB C N N 457 LEU CG C N N 458 LEU CD1 C N N 459 LEU CD2 C N N 460 LEU OXT O N N 461 LEU H H N N 462 LEU H2 H N N 463 LEU HA H N N 464 LEU HB2 H N N 465 LEU HB3 H N N 466 LEU HG H N N 467 LEU HD11 H N N 468 LEU HD12 H N N 469 LEU HD13 H N N 470 LEU HD21 H N N 471 LEU HD22 H N N 472 LEU HD23 H N N 473 LEU HXT H N N 474 LYS N N N N 475 LYS CA C N S 476 LYS C C N N 477 LYS O O N N 478 LYS CB C N N 479 LYS CG C N N 480 LYS CD C N N 481 LYS CE C N N 482 LYS NZ N N N 483 LYS OXT O N N 484 LYS H H N N 485 LYS H2 H N N 486 LYS HA H N N 487 LYS HB2 H N N 488 LYS HB3 H N N 489 LYS HG2 H N N 490 LYS HG3 H N N 491 LYS HD2 H N N 492 LYS HD3 H N N 493 LYS HE2 H N N 494 LYS HE3 H N N 495 LYS HZ1 H N N 496 LYS HZ2 H N N 497 LYS HZ3 H N N 498 LYS HXT H N N 499 MAN C1 C N S 500 MAN C2 C N S 501 MAN C3 C N S 502 MAN C4 C N S 503 MAN C5 C N R 504 MAN C6 C N N 505 MAN O1 O N N 506 MAN O2 O N N 507 MAN O3 O N N 508 MAN O4 O N N 509 MAN O5 O N N 510 MAN O6 O N N 511 MAN H1 H N N 512 MAN H2 H N N 513 MAN H3 H N N 514 MAN H4 H N N 515 MAN H5 H N N 516 MAN H61 H N N 517 MAN H62 H N N 518 MAN HO1 H N N 519 MAN HO2 H N N 520 MAN HO3 H N N 521 MAN HO4 H N N 522 MAN HO6 H N N 523 MET N N N N 524 MET CA C N S 525 MET C C N N 526 MET O O N N 527 MET CB C N N 528 MET CG C N N 529 MET SD S N N 530 MET CE C N N 531 MET OXT O N N 532 MET H H N N 533 MET H2 H N N 534 MET HA H N N 535 MET HB2 H N N 536 MET HB3 H N N 537 MET HG2 H N N 538 MET HG3 H N N 539 MET HE1 H N N 540 MET HE2 H N N 541 MET HE3 H N N 542 MET HXT H N N 543 NA NA NA N N 544 NAG C1 C N R 545 NAG C2 C N R 546 NAG C3 C N R 547 NAG C4 C N S 548 NAG C5 C N R 549 NAG C6 C N N 550 NAG C7 C N N 551 NAG C8 C N N 552 NAG N2 N N N 553 NAG O1 O N N 554 NAG O3 O N N 555 NAG O4 O N N 556 NAG O5 O N N 557 NAG O6 O N N 558 NAG O7 O N N 559 NAG H1 H N N 560 NAG H2 H N N 561 NAG H3 H N N 562 NAG H4 H N N 563 NAG H5 H N N 564 NAG H61 H N N 565 NAG H62 H N N 566 NAG H81 H N N 567 NAG H82 H N N 568 NAG H83 H N N 569 NAG HN2 H N N 570 NAG HO1 H N N 571 NAG HO3 H N N 572 NAG HO4 H N N 573 NAG HO6 H N N 574 PHE N N N N 575 PHE CA C N S 576 PHE C C N N 577 PHE O O N N 578 PHE CB C N N 579 PHE CG C Y N 580 PHE CD1 C Y N 581 PHE CD2 C Y N 582 PHE CE1 C Y N 583 PHE CE2 C Y N 584 PHE CZ C Y N 585 PHE OXT O N N 586 PHE H H N N 587 PHE H2 H N N 588 PHE HA H N N 589 PHE HB2 H N N 590 PHE HB3 H N N 591 PHE HD1 H N N 592 PHE HD2 H N N 593 PHE HE1 H N N 594 PHE HE2 H N N 595 PHE HZ H N N 596 PHE HXT H N N 597 PRO N N N N 598 PRO CA C N S 599 PRO C C N N 600 PRO O O N N 601 PRO CB C N N 602 PRO CG C N N 603 PRO CD C N N 604 PRO OXT O N N 605 PRO H H N N 606 PRO HA H N N 607 PRO HB2 H N N 608 PRO HB3 H N N 609 PRO HG2 H N N 610 PRO HG3 H N N 611 PRO HD2 H N N 612 PRO HD3 H N N 613 PRO HXT H N N 614 SER N N N N 615 SER CA C N S 616 SER C C N N 617 SER O O N N 618 SER CB C N N 619 SER OG O N N 620 SER OXT O N N 621 SER H H N N 622 SER H2 H N N 623 SER HA H N N 624 SER HB2 H N N 625 SER HB3 H N N 626 SER HG H N N 627 SER HXT H N N 628 SIA C1 C N N 629 SIA C2 C N R 630 SIA C3 C N N 631 SIA C4 C N S 632 SIA C5 C N R 633 SIA C6 C N R 634 SIA C7 C N R 635 SIA C8 C N R 636 SIA C9 C N N 637 SIA C10 C N N 638 SIA C11 C N N 639 SIA N5 N N N 640 SIA O1A O N N 641 SIA O1B O N N 642 SIA O2 O N N 643 SIA O4 O N N 644 SIA O6 O N N 645 SIA O7 O N N 646 SIA O8 O N N 647 SIA O9 O N N 648 SIA O10 O N N 649 SIA H32 H N N 650 SIA H31 H N N 651 SIA H4 H N N 652 SIA H5 H N N 653 SIA H6 H N N 654 SIA H7 H N N 655 SIA H8 H N N 656 SIA H92 H N N 657 SIA H91 H N N 658 SIA H111 H N N 659 SIA H113 H N N 660 SIA H112 H N N 661 SIA HN5 H N N 662 SIA HO1B H N N 663 SIA HO2 H N N 664 SIA HO4 H N N 665 SIA HO7 H N N 666 SIA HO8 H N N 667 SIA HO9 H N N 668 THR N N N N 669 THR CA C N S 670 THR C C N N 671 THR O O N N 672 THR CB C N R 673 THR OG1 O N N 674 THR CG2 C N N 675 THR OXT O N N 676 THR H H N N 677 THR H2 H N N 678 THR HA H N N 679 THR HB H N N 680 THR HG1 H N N 681 THR HG21 H N N 682 THR HG22 H N N 683 THR HG23 H N N 684 THR HXT H N N 685 TRP N N N N 686 TRP CA C N S 687 TRP C C N N 688 TRP O O N N 689 TRP CB C N N 690 TRP CG C Y N 691 TRP CD1 C Y N 692 TRP CD2 C Y N 693 TRP NE1 N Y N 694 TRP CE2 C Y N 695 TRP CE3 C Y N 696 TRP CZ2 C Y N 697 TRP CZ3 C Y N 698 TRP CH2 C Y N 699 TRP OXT O N N 700 TRP H H N N 701 TRP H2 H N N 702 TRP HA H N N 703 TRP HB2 H N N 704 TRP HB3 H N N 705 TRP HD1 H N N 706 TRP HE1 H N N 707 TRP HE3 H N N 708 TRP HZ2 H N N 709 TRP HZ3 H N N 710 TRP HH2 H N N 711 TRP HXT H N N 712 TYR N N N N 713 TYR CA C N S 714 TYR C C N N 715 TYR O O N N 716 TYR CB C N N 717 TYR CG C Y N 718 TYR CD1 C Y N 719 TYR CD2 C Y N 720 TYR CE1 C Y N 721 TYR CE2 C Y N 722 TYR CZ C Y N 723 TYR OH O N N 724 TYR OXT O N N 725 TYR H H N N 726 TYR H2 H N N 727 TYR HA H N N 728 TYR HB2 H N N 729 TYR HB3 H N N 730 TYR HD1 H N N 731 TYR HD2 H N N 732 TYR HE1 H N N 733 TYR HE2 H N N 734 TYR HH H N N 735 TYR HXT H N N 736 VAL N N N N 737 VAL CA C N S 738 VAL C C N N 739 VAL O O N N 740 VAL CB C N N 741 VAL CG1 C N N 742 VAL CG2 C N N 743 VAL OXT O N N 744 VAL H H N N 745 VAL H2 H N N 746 VAL HA H N N 747 VAL HB H N N 748 VAL HG11 H N N 749 VAL HG12 H N N 750 VAL HG13 H N N 751 VAL HG21 H N N 752 VAL HG22 H N N 753 VAL HG23 H N N 754 VAL HXT H N N 755 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0G6 N CA sing N N 1 0G6 N H sing N N 2 0G6 N H2 sing N N 3 0G6 CA C sing N N 4 0G6 CA CB sing N N 5 0G6 CA HA sing N N 6 0G6 C O doub N N 7 0G6 C N1 sing N N 8 0G6 CB CG sing N N 9 0G6 CB HB2 sing N N 10 0G6 CB HB3 sing N N 11 0G6 CG CD1 doub Y N 12 0G6 CG CD2 sing Y N 13 0G6 CD1 CE1 sing Y N 14 0G6 CD1 HD1 sing N N 15 0G6 CD2 CE2 doub Y N 16 0G6 CD2 HD2 sing N N 17 0G6 CE1 CZ doub Y N 18 0G6 CE1 HE1 sing N N 19 0G6 CE2 CZ sing Y N 20 0G6 CE2 HE2 sing N N 21 0G6 CZ HZ sing N N 22 0G6 N1 CA1 sing N N 23 0G6 N1 CD sing N N 24 0G6 CA1 C1 sing N N 25 0G6 CA1 CB1 sing N N 26 0G6 CA1 HA1 sing N N 27 0G6 C1 O1 doub N N 28 0G6 C1 N2 sing N N 29 0G6 CB1 CG1 sing N N 30 0G6 CB1 HB21 sing N N 31 0G6 CB1 HB31 sing N N 32 0G6 CG1 CD sing N N 33 0G6 CG1 HG2 sing N N 34 0G6 CG1 HG3 sing N N 35 0G6 CD HD21 sing N N 36 0G6 CD HD3 sing N N 37 0G6 N2 CA2 sing N N 38 0G6 N2 H1 sing N N 39 0G6 CA2 C2 sing N N 40 0G6 CA2 CB2 sing N N 41 0G6 CA2 HA2 sing N N 42 0G6 C2 O2 sing N N 43 0G6 C2 C3 sing N N 44 0G6 CB2 CG2 sing N N 45 0G6 CB2 HB22 sing N N 46 0G6 CB2 HB32 sing N N 47 0G6 CG2 CD3 sing N N 48 0G6 CG2 HG21 sing N N 49 0G6 CG2 HG31 sing N N 50 0G6 CD3 NE sing N N 51 0G6 CD3 HD22 sing N N 52 0G6 CD3 HD31 sing N N 53 0G6 NE CZ1 sing N N 54 0G6 NE HE sing N N 55 0G6 CZ1 NH1 sing N N 56 0G6 CZ1 NH2 doub N N 57 0G6 NH1 HH11 sing N N 58 0G6 NH1 HH12 sing N N 59 0G6 NH2 HH21 sing N N 60 0G6 NH2 HH22 sing N N 61 0G6 C3 H11 sing N N 62 0G6 C3 H21 sing N N 63 0G6 CL C3 sing N N 64 0G6 C2 H33 sing N N 65 0G6 O2 H34 sing N N 66 ALA N CA sing N N 67 ALA N H sing N N 68 ALA N H2 sing N N 69 ALA CA C sing N N 70 ALA CA CB sing N N 71 ALA CA HA sing N N 72 ALA C O doub N N 73 ALA C OXT sing N N 74 ALA CB HB1 sing N N 75 ALA CB HB2 sing N N 76 ALA CB HB3 sing N N 77 ALA OXT HXT sing N N 78 ARG N CA sing N N 79 ARG N H sing N N 80 ARG N H2 sing N N 81 ARG CA C sing N N 82 ARG CA CB sing N N 83 ARG CA HA sing N N 84 ARG C O doub N N 85 ARG C OXT sing N N 86 ARG CB CG sing N N 87 ARG CB HB2 sing N N 88 ARG CB HB3 sing N N 89 ARG CG CD sing N N 90 ARG CG HG2 sing N N 91 ARG CG HG3 sing N N 92 ARG CD NE sing N N 93 ARG CD HD2 sing N N 94 ARG CD HD3 sing N N 95 ARG NE CZ sing N N 96 ARG NE HE sing N N 97 ARG CZ NH1 sing N N 98 ARG CZ NH2 doub N N 99 ARG NH1 HH11 sing N N 100 ARG NH1 HH12 sing N N 101 ARG NH2 HH21 sing N N 102 ARG NH2 HH22 sing N N 103 ARG OXT HXT sing N N 104 ASN N CA sing N N 105 ASN N H sing N N 106 ASN N H2 sing N N 107 ASN CA C sing N N 108 ASN CA CB sing N N 109 ASN CA HA sing N N 110 ASN C O doub N N 111 ASN C OXT sing N N 112 ASN CB CG sing N N 113 ASN CB HB2 sing N N 114 ASN CB HB3 sing N N 115 ASN CG OD1 doub N N 116 ASN CG ND2 sing N N 117 ASN ND2 HD21 sing N N 118 ASN ND2 HD22 sing N N 119 ASN OXT HXT sing N N 120 ASP N CA sing N N 121 ASP N H sing N N 122 ASP N H2 sing N N 123 ASP CA C sing N N 124 ASP CA CB sing N N 125 ASP CA HA sing N N 126 ASP C O doub N N 127 ASP C OXT sing N N 128 ASP CB CG sing N N 129 ASP CB HB2 sing N N 130 ASP CB HB3 sing N N 131 ASP CG OD1 doub N N 132 ASP CG OD2 sing N N 133 ASP OD2 HD2 sing N N 134 ASP OXT HXT sing N N 135 BMA C1 C2 sing N N 136 BMA C1 O1 sing N N 137 BMA C1 O5 sing N N 138 BMA C1 H1 sing N N 139 BMA C2 C3 sing N N 140 BMA C2 O2 sing N N 141 BMA C2 H2 sing N N 142 BMA C3 C4 sing N N 143 BMA C3 O3 sing N N 144 BMA C3 H3 sing N N 145 BMA C4 C5 sing N N 146 BMA C4 O4 sing N N 147 BMA C4 H4 sing N N 148 BMA C5 C6 sing N N 149 BMA C5 O5 sing N N 150 BMA C5 H5 sing N N 151 BMA C6 O6 sing N N 152 BMA C6 H61 sing N N 153 BMA C6 H62 sing N N 154 BMA O1 HO1 sing N N 155 BMA O2 HO2 sing N N 156 BMA O3 HO3 sing N N 157 BMA O4 HO4 sing N N 158 BMA O6 HO6 sing N N 159 CYS N CA sing N N 160 CYS N H sing N N 161 CYS N H2 sing N N 162 CYS CA C sing N N 163 CYS CA CB sing N N 164 CYS CA HA sing N N 165 CYS C O doub N N 166 CYS C OXT sing N N 167 CYS CB SG sing N N 168 CYS CB HB2 sing N N 169 CYS CB HB3 sing N N 170 CYS SG HG sing N N 171 CYS OXT HXT sing N N 172 DA OP3 P sing N N 173 DA OP3 HOP3 sing N N 174 DA P OP1 doub N N 175 DA P OP2 sing N N 176 DA P "O5'" sing N N 177 DA OP2 HOP2 sing N N 178 DA "O5'" "C5'" sing N N 179 DA "C5'" "C4'" sing N N 180 DA "C5'" "H5'" sing N N 181 DA "C5'" "H5''" sing N N 182 DA "C4'" "O4'" sing N N 183 DA "C4'" "C3'" sing N N 184 DA "C4'" "H4'" sing N N 185 DA "O4'" "C1'" sing N N 186 DA "C3'" "O3'" sing N N 187 DA "C3'" "C2'" sing N N 188 DA "C3'" "H3'" sing N N 189 DA "O3'" "HO3'" sing N N 190 DA "C2'" "C1'" sing N N 191 DA "C2'" "H2'" sing N N 192 DA "C2'" "H2''" sing N N 193 DA "C1'" N9 sing N N 194 DA "C1'" "H1'" sing N N 195 DA N9 C8 sing Y N 196 DA N9 C4 sing Y N 197 DA C8 N7 doub Y N 198 DA C8 H8 sing N N 199 DA N7 C5 sing Y N 200 DA C5 C6 sing Y N 201 DA C5 C4 doub Y N 202 DA C6 N6 sing N N 203 DA C6 N1 doub Y N 204 DA N6 H61 sing N N 205 DA N6 H62 sing N N 206 DA N1 C2 sing Y N 207 DA C2 N3 doub Y N 208 DA C2 H2 sing N N 209 DA N3 C4 sing Y N 210 DC OP3 P sing N N 211 DC OP3 HOP3 sing N N 212 DC P OP1 doub N N 213 DC P OP2 sing N N 214 DC P "O5'" sing N N 215 DC OP2 HOP2 sing N N 216 DC "O5'" "C5'" sing N N 217 DC "C5'" "C4'" sing N N 218 DC "C5'" "H5'" sing N N 219 DC "C5'" "H5''" sing N N 220 DC "C4'" "O4'" sing N N 221 DC "C4'" "C3'" sing N N 222 DC "C4'" "H4'" sing N N 223 DC "O4'" "C1'" sing N N 224 DC "C3'" "O3'" sing N N 225 DC "C3'" "C2'" sing N N 226 DC "C3'" "H3'" sing N N 227 DC "O3'" "HO3'" sing N N 228 DC "C2'" "C1'" sing N N 229 DC "C2'" "H2'" sing N N 230 DC "C2'" "H2''" sing N N 231 DC "C1'" N1 sing N N 232 DC "C1'" "H1'" sing N N 233 DC N1 C2 sing N N 234 DC N1 C6 sing N N 235 DC C2 O2 doub N N 236 DC C2 N3 sing N N 237 DC N3 C4 doub N N 238 DC C4 N4 sing N N 239 DC C4 C5 sing N N 240 DC N4 H41 sing N N 241 DC N4 H42 sing N N 242 DC C5 C6 doub N N 243 DC C5 H5 sing N N 244 DC C6 H6 sing N N 245 DG OP3 P sing N N 246 DG OP3 HOP3 sing N N 247 DG P OP1 doub N N 248 DG P OP2 sing N N 249 DG P "O5'" sing N N 250 DG OP2 HOP2 sing N N 251 DG "O5'" "C5'" sing N N 252 DG "C5'" "C4'" sing N N 253 DG "C5'" "H5'" sing N N 254 DG "C5'" "H5''" sing N N 255 DG "C4'" "O4'" sing N N 256 DG "C4'" "C3'" sing N N 257 DG "C4'" "H4'" sing N N 258 DG "O4'" "C1'" sing N N 259 DG "C3'" "O3'" sing N N 260 DG "C3'" "C2'" sing N N 261 DG "C3'" "H3'" sing N N 262 DG "O3'" "HO3'" sing N N 263 DG "C2'" "C1'" sing N N 264 DG "C2'" "H2'" sing N N 265 DG "C2'" "H2''" sing N N 266 DG "C1'" N9 sing N N 267 DG "C1'" "H1'" sing N N 268 DG N9 C8 sing Y N 269 DG N9 C4 sing Y N 270 DG C8 N7 doub Y N 271 DG C8 H8 sing N N 272 DG N7 C5 sing Y N 273 DG C5 C6 sing N N 274 DG C5 C4 doub Y N 275 DG C6 O6 doub N N 276 DG C6 N1 sing N N 277 DG N1 C2 sing N N 278 DG N1 H1 sing N N 279 DG C2 N2 sing N N 280 DG C2 N3 doub N N 281 DG N2 H21 sing N N 282 DG N2 H22 sing N N 283 DG N3 C4 sing N N 284 DT OP3 P sing N N 285 DT OP3 HOP3 sing N N 286 DT P OP1 doub N N 287 DT P OP2 sing N N 288 DT P "O5'" sing N N 289 DT OP2 HOP2 sing N N 290 DT "O5'" "C5'" sing N N 291 DT "C5'" "C4'" sing N N 292 DT "C5'" "H5'" sing N N 293 DT "C5'" "H5''" sing N N 294 DT "C4'" "O4'" sing N N 295 DT "C4'" "C3'" sing N N 296 DT "C4'" "H4'" sing N N 297 DT "O4'" "C1'" sing N N 298 DT "C3'" "O3'" sing N N 299 DT "C3'" "C2'" sing N N 300 DT "C3'" "H3'" sing N N 301 DT "O3'" "HO3'" sing N N 302 DT "C2'" "C1'" sing N N 303 DT "C2'" "H2'" sing N N 304 DT "C2'" "H2''" sing N N 305 DT "C1'" N1 sing N N 306 DT "C1'" "H1'" sing N N 307 DT N1 C2 sing N N 308 DT N1 C6 sing N N 309 DT C2 O2 doub N N 310 DT C2 N3 sing N N 311 DT N3 C4 sing N N 312 DT N3 H3 sing N N 313 DT C4 O4 doub N N 314 DT C4 C5 sing N N 315 DT C5 C7 sing N N 316 DT C5 C6 doub N N 317 DT C7 H71 sing N N 318 DT C7 H72 sing N N 319 DT C7 H73 sing N N 320 DT C6 H6 sing N N 321 GAL C1 C2 sing N N 322 GAL C1 O1 sing N N 323 GAL C1 O5 sing N N 324 GAL C1 H1 sing N N 325 GAL C2 C3 sing N N 326 GAL C2 O2 sing N N 327 GAL C2 H2 sing N N 328 GAL C3 C4 sing N N 329 GAL C3 O3 sing N N 330 GAL C3 H3 sing N N 331 GAL C4 C5 sing N N 332 GAL C4 O4 sing N N 333 GAL C4 H4 sing N N 334 GAL C5 C6 sing N N 335 GAL C5 O5 sing N N 336 GAL C5 H5 sing N N 337 GAL C6 O6 sing N N 338 GAL C6 H61 sing N N 339 GAL C6 H62 sing N N 340 GAL O1 HO1 sing N N 341 GAL O2 HO2 sing N N 342 GAL O3 HO3 sing N N 343 GAL O4 HO4 sing N N 344 GAL O6 HO6 sing N N 345 GLN N CA sing N N 346 GLN N H sing N N 347 GLN N H2 sing N N 348 GLN CA C sing N N 349 GLN CA CB sing N N 350 GLN CA HA sing N N 351 GLN C O doub N N 352 GLN C OXT sing N N 353 GLN CB CG sing N N 354 GLN CB HB2 sing N N 355 GLN CB HB3 sing N N 356 GLN CG CD sing N N 357 GLN CG HG2 sing N N 358 GLN CG HG3 sing N N 359 GLN CD OE1 doub N N 360 GLN CD NE2 sing N N 361 GLN NE2 HE21 sing N N 362 GLN NE2 HE22 sing N N 363 GLN OXT HXT sing N N 364 GLU N CA sing N N 365 GLU N H sing N N 366 GLU N H2 sing N N 367 GLU CA C sing N N 368 GLU CA CB sing N N 369 GLU CA HA sing N N 370 GLU C O doub N N 371 GLU C OXT sing N N 372 GLU CB CG sing N N 373 GLU CB HB2 sing N N 374 GLU CB HB3 sing N N 375 GLU CG CD sing N N 376 GLU CG HG2 sing N N 377 GLU CG HG3 sing N N 378 GLU CD OE1 doub N N 379 GLU CD OE2 sing N N 380 GLU OE2 HE2 sing N N 381 GLU OXT HXT sing N N 382 GLY N CA sing N N 383 GLY N H sing N N 384 GLY N H2 sing N N 385 GLY CA C sing N N 386 GLY CA HA2 sing N N 387 GLY CA HA3 sing N N 388 GLY C O doub N N 389 GLY C OXT sing N N 390 GLY OXT HXT sing N N 391 GOL C1 O1 sing N N 392 GOL C1 C2 sing N N 393 GOL C1 H11 sing N N 394 GOL C1 H12 sing N N 395 GOL O1 HO1 sing N N 396 GOL C2 O2 sing N N 397 GOL C2 C3 sing N N 398 GOL C2 H2 sing N N 399 GOL O2 HO2 sing N N 400 GOL C3 O3 sing N N 401 GOL C3 H31 sing N N 402 GOL C3 H32 sing N N 403 GOL O3 HO3 sing N N 404 HIS N CA sing N N 405 HIS N H sing N N 406 HIS N H2 sing N N 407 HIS CA C sing N N 408 HIS CA CB sing N N 409 HIS CA HA sing N N 410 HIS C O doub N N 411 HIS C OXT sing N N 412 HIS CB CG sing N N 413 HIS CB HB2 sing N N 414 HIS CB HB3 sing N N 415 HIS CG ND1 sing Y N 416 HIS CG CD2 doub Y N 417 HIS ND1 CE1 doub Y N 418 HIS ND1 HD1 sing N N 419 HIS CD2 NE2 sing Y N 420 HIS CD2 HD2 sing N N 421 HIS CE1 NE2 sing Y N 422 HIS CE1 HE1 sing N N 423 HIS NE2 HE2 sing N N 424 HIS OXT HXT sing N N 425 HOH O H1 sing N N 426 HOH O H2 sing N N 427 ILE N CA sing N N 428 ILE N H sing N N 429 ILE N H2 sing N N 430 ILE CA C sing N N 431 ILE CA CB sing N N 432 ILE CA HA sing N N 433 ILE C O doub N N 434 ILE C OXT sing N N 435 ILE CB CG1 sing N N 436 ILE CB CG2 sing N N 437 ILE CB HB sing N N 438 ILE CG1 CD1 sing N N 439 ILE CG1 HG12 sing N N 440 ILE CG1 HG13 sing N N 441 ILE CG2 HG21 sing N N 442 ILE CG2 HG22 sing N N 443 ILE CG2 HG23 sing N N 444 ILE CD1 HD11 sing N N 445 ILE CD1 HD12 sing N N 446 ILE CD1 HD13 sing N N 447 ILE OXT HXT sing N N 448 LEU N CA sing N N 449 LEU N H sing N N 450 LEU N H2 sing N N 451 LEU CA C sing N N 452 LEU CA CB sing N N 453 LEU CA HA sing N N 454 LEU C O doub N N 455 LEU C OXT sing N N 456 LEU CB CG sing N N 457 LEU CB HB2 sing N N 458 LEU CB HB3 sing N N 459 LEU CG CD1 sing N N 460 LEU CG CD2 sing N N 461 LEU CG HG sing N N 462 LEU CD1 HD11 sing N N 463 LEU CD1 HD12 sing N N 464 LEU CD1 HD13 sing N N 465 LEU CD2 HD21 sing N N 466 LEU CD2 HD22 sing N N 467 LEU CD2 HD23 sing N N 468 LEU OXT HXT sing N N 469 LYS N CA sing N N 470 LYS N H sing N N 471 LYS N H2 sing N N 472 LYS CA C sing N N 473 LYS CA CB sing N N 474 LYS CA HA sing N N 475 LYS C O doub N N 476 LYS C OXT sing N N 477 LYS CB CG sing N N 478 LYS CB HB2 sing N N 479 LYS CB HB3 sing N N 480 LYS CG CD sing N N 481 LYS CG HG2 sing N N 482 LYS CG HG3 sing N N 483 LYS CD CE sing N N 484 LYS CD HD2 sing N N 485 LYS CD HD3 sing N N 486 LYS CE NZ sing N N 487 LYS CE HE2 sing N N 488 LYS CE HE3 sing N N 489 LYS NZ HZ1 sing N N 490 LYS NZ HZ2 sing N N 491 LYS NZ HZ3 sing N N 492 LYS OXT HXT sing N N 493 MAN C1 C2 sing N N 494 MAN C1 O1 sing N N 495 MAN C1 O5 sing N N 496 MAN C1 H1 sing N N 497 MAN C2 C3 sing N N 498 MAN C2 O2 sing N N 499 MAN C2 H2 sing N N 500 MAN C3 C4 sing N N 501 MAN C3 O3 sing N N 502 MAN C3 H3 sing N N 503 MAN C4 C5 sing N N 504 MAN C4 O4 sing N N 505 MAN C4 H4 sing N N 506 MAN C5 C6 sing N N 507 MAN C5 O5 sing N N 508 MAN C5 H5 sing N N 509 MAN C6 O6 sing N N 510 MAN C6 H61 sing N N 511 MAN C6 H62 sing N N 512 MAN O1 HO1 sing N N 513 MAN O2 HO2 sing N N 514 MAN O3 HO3 sing N N 515 MAN O4 HO4 sing N N 516 MAN O6 HO6 sing N N 517 MET N CA sing N N 518 MET N H sing N N 519 MET N H2 sing N N 520 MET CA C sing N N 521 MET CA CB sing N N 522 MET CA HA sing N N 523 MET C O doub N N 524 MET C OXT sing N N 525 MET CB CG sing N N 526 MET CB HB2 sing N N 527 MET CB HB3 sing N N 528 MET CG SD sing N N 529 MET CG HG2 sing N N 530 MET CG HG3 sing N N 531 MET SD CE sing N N 532 MET CE HE1 sing N N 533 MET CE HE2 sing N N 534 MET CE HE3 sing N N 535 MET OXT HXT sing N N 536 NAG C1 C2 sing N N 537 NAG C1 O1 sing N N 538 NAG C1 O5 sing N N 539 NAG C1 H1 sing N N 540 NAG C2 C3 sing N N 541 NAG C2 N2 sing N N 542 NAG C2 H2 sing N N 543 NAG C3 C4 sing N N 544 NAG C3 O3 sing N N 545 NAG C3 H3 sing N N 546 NAG C4 C5 sing N N 547 NAG C4 O4 sing N N 548 NAG C4 H4 sing N N 549 NAG C5 C6 sing N N 550 NAG C5 O5 sing N N 551 NAG C5 H5 sing N N 552 NAG C6 O6 sing N N 553 NAG C6 H61 sing N N 554 NAG C6 H62 sing N N 555 NAG C7 C8 sing N N 556 NAG C7 N2 sing N N 557 NAG C7 O7 doub N N 558 NAG C8 H81 sing N N 559 NAG C8 H82 sing N N 560 NAG C8 H83 sing N N 561 NAG N2 HN2 sing N N 562 NAG O1 HO1 sing N N 563 NAG O3 HO3 sing N N 564 NAG O4 HO4 sing N N 565 NAG O6 HO6 sing N N 566 PHE N CA sing N N 567 PHE N H sing N N 568 PHE N H2 sing N N 569 PHE CA C sing N N 570 PHE CA CB sing N N 571 PHE CA HA sing N N 572 PHE C O doub N N 573 PHE C OXT sing N N 574 PHE CB CG sing N N 575 PHE CB HB2 sing N N 576 PHE CB HB3 sing N N 577 PHE CG CD1 doub Y N 578 PHE CG CD2 sing Y N 579 PHE CD1 CE1 sing Y N 580 PHE CD1 HD1 sing N N 581 PHE CD2 CE2 doub Y N 582 PHE CD2 HD2 sing N N 583 PHE CE1 CZ doub Y N 584 PHE CE1 HE1 sing N N 585 PHE CE2 CZ sing Y N 586 PHE CE2 HE2 sing N N 587 PHE CZ HZ sing N N 588 PHE OXT HXT sing N N 589 PRO N CA sing N N 590 PRO N CD sing N N 591 PRO N H sing N N 592 PRO CA C sing N N 593 PRO CA CB sing N N 594 PRO CA HA sing N N 595 PRO C O doub N N 596 PRO C OXT sing N N 597 PRO CB CG sing N N 598 PRO CB HB2 sing N N 599 PRO CB HB3 sing N N 600 PRO CG CD sing N N 601 PRO CG HG2 sing N N 602 PRO CG HG3 sing N N 603 PRO CD HD2 sing N N 604 PRO CD HD3 sing N N 605 PRO OXT HXT sing N N 606 SER N CA sing N N 607 SER N H sing N N 608 SER N H2 sing N N 609 SER CA C sing N N 610 SER CA CB sing N N 611 SER CA HA sing N N 612 SER C O doub N N 613 SER C OXT sing N N 614 SER CB OG sing N N 615 SER CB HB2 sing N N 616 SER CB HB3 sing N N 617 SER OG HG sing N N 618 SER OXT HXT sing N N 619 SIA C1 C2 sing N N 620 SIA C1 O1A doub N N 621 SIA C1 O1B sing N N 622 SIA C2 C3 sing N N 623 SIA C2 O2 sing N N 624 SIA C2 O6 sing N N 625 SIA C3 C4 sing N N 626 SIA C3 H32 sing N N 627 SIA C3 H31 sing N N 628 SIA C4 C5 sing N N 629 SIA C4 O4 sing N N 630 SIA C4 H4 sing N N 631 SIA C5 C6 sing N N 632 SIA C5 N5 sing N N 633 SIA C5 H5 sing N N 634 SIA C6 C7 sing N N 635 SIA C6 O6 sing N N 636 SIA C6 H6 sing N N 637 SIA C7 C8 sing N N 638 SIA C7 O7 sing N N 639 SIA C7 H7 sing N N 640 SIA C8 C9 sing N N 641 SIA C8 O8 sing N N 642 SIA C8 H8 sing N N 643 SIA C9 O9 sing N N 644 SIA C9 H92 sing N N 645 SIA C9 H91 sing N N 646 SIA C10 C11 sing N N 647 SIA C10 N5 sing N N 648 SIA C10 O10 doub N N 649 SIA C11 H111 sing N N 650 SIA C11 H113 sing N N 651 SIA C11 H112 sing N N 652 SIA N5 HN5 sing N N 653 SIA O1B HO1B sing N N 654 SIA O2 HO2 sing N N 655 SIA O4 HO4 sing N N 656 SIA O7 HO7 sing N N 657 SIA O8 HO8 sing N N 658 SIA O9 HO9 sing N N 659 THR N CA sing N N 660 THR N H sing N N 661 THR N H2 sing N N 662 THR CA C sing N N 663 THR CA CB sing N N 664 THR CA HA sing N N 665 THR C O doub N N 666 THR C OXT sing N N 667 THR CB OG1 sing N N 668 THR CB CG2 sing N N 669 THR CB HB sing N N 670 THR OG1 HG1 sing N N 671 THR CG2 HG21 sing N N 672 THR CG2 HG22 sing N N 673 THR CG2 HG23 sing N N 674 THR OXT HXT sing N N 675 TRP N CA sing N N 676 TRP N H sing N N 677 TRP N H2 sing N N 678 TRP CA C sing N N 679 TRP CA CB sing N N 680 TRP CA HA sing N N 681 TRP C O doub N N 682 TRP C OXT sing N N 683 TRP CB CG sing N N 684 TRP CB HB2 sing N N 685 TRP CB HB3 sing N N 686 TRP CG CD1 doub Y N 687 TRP CG CD2 sing Y N 688 TRP CD1 NE1 sing Y N 689 TRP CD1 HD1 sing N N 690 TRP CD2 CE2 doub Y N 691 TRP CD2 CE3 sing Y N 692 TRP NE1 CE2 sing Y N 693 TRP NE1 HE1 sing N N 694 TRP CE2 CZ2 sing Y N 695 TRP CE3 CZ3 doub Y N 696 TRP CE3 HE3 sing N N 697 TRP CZ2 CH2 doub Y N 698 TRP CZ2 HZ2 sing N N 699 TRP CZ3 CH2 sing Y N 700 TRP CZ3 HZ3 sing N N 701 TRP CH2 HH2 sing N N 702 TRP OXT HXT sing N N 703 TYR N CA sing N N 704 TYR N H sing N N 705 TYR N H2 sing N N 706 TYR CA C sing N N 707 TYR CA CB sing N N 708 TYR CA HA sing N N 709 TYR C O doub N N 710 TYR C OXT sing N N 711 TYR CB CG sing N N 712 TYR CB HB2 sing N N 713 TYR CB HB3 sing N N 714 TYR CG CD1 doub Y N 715 TYR CG CD2 sing Y N 716 TYR CD1 CE1 sing Y N 717 TYR CD1 HD1 sing N N 718 TYR CD2 CE2 doub Y N 719 TYR CD2 HD2 sing N N 720 TYR CE1 CZ doub Y N 721 TYR CE1 HE1 sing N N 722 TYR CE2 CZ sing Y N 723 TYR CE2 HE2 sing N N 724 TYR CZ OH sing N N 725 TYR OH HH sing N N 726 TYR OXT HXT sing N N 727 VAL N CA sing N N 728 VAL N H sing N N 729 VAL N H2 sing N N 730 VAL CA C sing N N 731 VAL CA CB sing N N 732 VAL CA HA sing N N 733 VAL C O doub N N 734 VAL C OXT sing N N 735 VAL CB CG1 sing N N 736 VAL CB CG2 sing N N 737 VAL CB HB sing N N 738 VAL CG1 HG11 sing N N 739 VAL CG1 HG12 sing N N 740 VAL CG1 HG13 sing N N 741 VAL CG2 HG21 sing N N 742 VAL CG2 HG22 sing N N 743 VAL CG2 HG23 sing N N 744 VAL OXT HXT sing N N 745 # _ndb_struct_conf_na.entry_id 6GN7 _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DC 1 1_555 C DG 26 1_555 -0.183 0.081 0.957 -9.943 -15.224 15.359 1 E_DC1:DG26_E E 1 ? E 26 ? 22 1 1 C DG 2 1_555 C DC 25 1_555 -0.688 -0.066 0.465 7.442 -9.064 9.337 2 E_DG2:DC25_E E 2 ? E 25 ? 19 1 1 C DC 3 1_555 C DG 24 1_555 -0.631 -0.065 0.832 -11.618 -14.658 1.313 3 E_DC3:DG24_E E 3 ? E 24 ? 19 1 1 C DC 4 1_555 C DG 23 1_555 -0.380 -0.090 0.690 -8.245 -5.410 5.509 4 E_DC4:DG23_E E 4 ? E 23 ? 19 1 1 C DT 5 1_555 C DA 15 1_555 3.987 -1.995 0.288 9.065 5.303 -99.797 5 E_DT5:DA15_E E 5 ? E 15 ? 24 4 1 C DA 6 1_555 C DT 22 1_555 -0.228 -0.219 0.270 -19.027 -2.767 13.410 6 E_DA6:DT22_E E 6 ? E 22 ? 20 1 1 C DG 16 1_555 C DG 21 1_555 1.306 3.466 0.059 0.528 -11.438 -89.774 7 E_DG16:DG21_E E 16 ? E 21 ? 6 3 1 C DG 8 1_555 C DG 20 1_555 1.044 3.508 -0.214 8.091 6.315 -87.115 8 E_DG8:DG20_E E 8 ? E 20 ? 6 3 1 C DG 11 1_555 C DG 17 1_555 -1.040 -3.567 0.125 -2.126 1.371 88.331 9 E_DG11:DG17_E E 11 ? E 17 ? 6 3 1 C DG 13 1_555 C DG 18 1_555 1.706 2.847 1.001 -4.316 -6.887 -98.071 10 E_DG13:DG18_E E 13 ? E 18 ? 6 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DC 1 1_555 C DG 26 1_555 C DG 2 1_555 C DC 25 1_555 0.106 0.433 2.865 3.751 6.805 29.786 -0.374 0.456 2.883 12.962 -7.145 30.761 1 EE_DC1DG2:DC25DG26_EE E 1 ? E 26 ? E 2 ? E 25 ? 1 C DG 2 1_555 C DC 25 1_555 C DC 3 1_555 C DG 24 1_555 0.855 -0.769 3.562 -0.203 1.294 34.753 -1.500 -1.463 3.527 2.166 0.339 34.777 2 EE_DG2DC3:DG24DC25_EE E 2 ? E 25 ? E 3 ? E 24 ? 1 C DC 3 1_555 C DG 24 1_555 C DC 4 1_555 C DG 23 1_555 0.134 -0.619 3.108 0.664 5.269 41.648 -1.379 -0.122 3.013 7.375 -0.930 41.971 3 EE_DC3DC4:DG23DG24_EE E 3 ? E 24 ? E 4 ? E 23 ? 1 C DC 4 1_555 C DG 23 1_555 C DT 5 1_555 C DA 15 1_555 -1.216 -0.315 3.073 4.280 -3.431 81.070 -0.160 1.036 3.027 -2.637 -3.289 81.224 4 EE_DC4DT5:DA15DG23_EE E 4 ? E 23 ? E 5 ? E 15 ? 1 C DT 5 1_555 C DA 15 1_555 C DA 6 1_555 C DT 22 1_555 -0.671 -1.762 3.394 8.715 -3.935 -39.725 2.975 0.031 3.281 5.691 12.604 -40.814 5 EE_DT5DA6:DT22DA15_EE E 5 ? E 15 ? E 6 ? E 22 ? 1 C DA 6 1_555 C DT 22 1_555 C DG 16 1_555 C DG 21 1_555 1.221 -2.880 -1.270 -142.047 -95.515 -10.674 0.940 1.362 -0.710 49.990 -74.345 -171.212 6 EE_DA6DG16:DG21DT22_EE E 6 ? E 22 ? E 16 ? E 21 ? 1 C DG 16 1_555 C DG 21 1_555 C DG 8 1_555 C DG 20 1_555 1.284 2.728 -0.047 -166.240 40.182 -150.859 -1.365 0.639 0.107 -20.125 -83.260 -177.745 7 EE_DG16DG8:DG20DG21_EE E 16 ? E 21 ? E 8 ? E 20 ? 1 C DG 8 1_555 C DG 20 1_555 C DG 11 1_555 C DG 17 1_555 -1.247 -3.313 0.322 1.849 5.212 179.727 -1.657 0.624 0.322 2.606 -0.924 179.727 8 EE_DG8DG11:DG17DG20_EE E 8 ? E 20 ? E 11 ? E 17 ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 4 NAG 1 n 4 NAG 2 n 4 BMA 3 n 4 MAN 4 n 4 NAG 5 n 4 GAL 6 n 4 SIA 7 n # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1PPB _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 6GN7 _atom_sites.fract_transf_matrix[1][1] 0.014852 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008286 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004786 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N NA O P S # loop_