HEADER VIRAL PROTEIN 03-JUL-18 6GZA TITLE STRUCTURE OF MURINE LEUKEMIA VIRUS CAPSID C-TERMINAL DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MURINE LEUKEMIA VIRUS; SOURCE 3 ORGANISM_TAXID: 11786; SOURCE 4 GENE: GAG; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS CAPSID, DIMER, COBALT, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.QU,M.DOLEZAL,F.K.M.SCHUR,B.MURCIANO,M.RUMLOVA,T.RUML,J.A.G.BRIGGS REVDAT 2 19-DEC-18 6GZA 1 JRNL REVDAT 1 05-DEC-18 6GZA 0 JRNL AUTH K.QU,B.GLASS,M.DOLEZAL,F.K.M.SCHUR,B.MURCIANO,A.REIN, JRNL AUTH 2 M.RUMLOVA,T.RUML,H.G.KRAUSSLICH,J.A.G.BRIGGS JRNL TITL STRUCTURE AND ARCHITECTURE OF IMMATURE AND MATURE MURINE JRNL TITL 2 LEUKEMIA VIRUS CAPSIDS. JRNL REF PROC. NATL. ACAD. SCI. V. 115 11751 2018 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 30478053 JRNL DOI 10.1073/PNAS.1811580115 REMARK 2 REMARK 2 RESOLUTION. 1.89 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.89 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.180 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 34992 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 1787 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.6053 - 4.4417 1.00 2593 110 0.1592 0.1906 REMARK 3 2 4.4417 - 3.5265 1.00 2541 139 0.1461 0.1982 REMARK 3 3 3.5265 - 3.0810 1.00 2546 127 0.1597 0.1533 REMARK 3 4 3.0810 - 2.7994 1.00 2587 143 0.1699 0.2108 REMARK 3 5 2.7994 - 2.5989 1.00 2557 126 0.1578 0.2069 REMARK 3 6 2.5989 - 2.4457 1.00 2539 150 0.1733 0.2192 REMARK 3 7 2.4457 - 2.3232 1.00 2589 109 0.1797 0.2730 REMARK 3 8 2.3232 - 2.2221 1.00 2558 123 0.1893 0.2647 REMARK 3 9 2.2221 - 2.1366 1.00 2511 160 0.2052 0.2493 REMARK 3 10 2.1366 - 2.0628 1.00 2577 144 0.2110 0.2524 REMARK 3 11 2.0628 - 1.9983 1.00 2533 138 0.2381 0.2849 REMARK 3 12 1.9983 - 1.9412 1.00 2541 148 0.2694 0.3001 REMARK 3 13 1.9412 - 1.8901 0.99 2533 170 0.3179 0.3307 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.900 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1422 REMARK 3 ANGLE : 0.724 1918 REMARK 3 CHIRALITY : 0.046 204 REMARK 3 PLANARITY : 0.006 254 REMARK 3 DIHEDRAL : 10.599 892 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.3233 38.5210 -6.5036 REMARK 3 T TENSOR REMARK 3 T11: 0.2484 T22: 0.2509 REMARK 3 T33: 0.2427 T12: 0.0075 REMARK 3 T13: 0.0350 T23: -0.0200 REMARK 3 L TENSOR REMARK 3 L11: 0.1756 L22: 0.1533 REMARK 3 L33: 0.0562 L12: 0.1604 REMARK 3 L13: 0.0316 L23: -0.0214 REMARK 3 S TENSOR REMARK 3 S11: 0.1203 S12: -0.1203 S13: 0.3134 REMARK 3 S21: -0.3967 S22: -0.0368 S23: -0.2881 REMARK 3 S31: 0.0673 S32: 0.1970 S33: 0.0007 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 19 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.2959 40.2589 1.8068 REMARK 3 T TENSOR REMARK 3 T11: 0.1698 T22: 0.2684 REMARK 3 T33: 0.1561 T12: -0.0657 REMARK 3 T13: 0.0143 T23: -0.0415 REMARK 3 L TENSOR REMARK 3 L11: 0.3062 L22: 0.3425 REMARK 3 L33: 0.0635 L12: 0.0030 REMARK 3 L13: -0.1124 L23: -0.0659 REMARK 3 S TENSOR REMARK 3 S11: 0.0488 S12: -0.3589 S13: 0.0811 REMARK 3 S21: 0.0825 S22: -0.0082 S23: -0.1472 REMARK 3 S31: -0.0882 S32: 0.1438 S33: -0.0116 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 41 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.5983 32.6435 1.8356 REMARK 3 T TENSOR REMARK 3 T11: 0.2171 T22: 0.2501 REMARK 3 T33: 0.1838 T12: -0.0590 REMARK 3 T13: 0.0539 T23: 0.0396 REMARK 3 L TENSOR REMARK 3 L11: 0.6193 L22: 0.6425 REMARK 3 L33: 1.0541 L12: -0.4875 REMARK 3 L13: 0.7613 L23: -0.4541 REMARK 3 S TENSOR REMARK 3 S11: 0.3738 S12: -0.2295 S13: -0.1020 REMARK 3 S21: 0.1067 S22: 0.0354 S23: 0.1231 REMARK 3 S31: 0.0973 S32: -0.2042 S33: 0.4159 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 55 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.2354 22.2283 -5.5967 REMARK 3 T TENSOR REMARK 3 T11: 0.3099 T22: 0.1815 REMARK 3 T33: 0.3599 T12: 0.0098 REMARK 3 T13: -0.0744 T23: -0.0464 REMARK 3 L TENSOR REMARK 3 L11: 0.0050 L22: 0.0070 REMARK 3 L33: -0.0044 L12: 0.0065 REMARK 3 L13: 0.0010 L23: 0.0009 REMARK 3 S TENSOR REMARK 3 S11: 0.1429 S12: 0.2256 S13: -0.6054 REMARK 3 S21: -0.3287 S22: -0.0878 S23: 0.2109 REMARK 3 S31: -0.1245 S32: 0.0387 S33: 0.0003 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 65 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.4929 21.8058 3.8919 REMARK 3 T TENSOR REMARK 3 T11: 0.2837 T22: 0.3151 REMARK 3 T33: 0.2315 T12: -0.0173 REMARK 3 T13: -0.0328 T23: 0.1165 REMARK 3 L TENSOR REMARK 3 L11: 1.0121 L22: 0.9928 REMARK 3 L33: 0.4187 L12: 0.7838 REMARK 3 L13: -0.0818 L23: 0.0776 REMARK 3 S TENSOR REMARK 3 S11: 0.1642 S12: -0.7581 S13: -0.5879 REMARK 3 S21: 0.1940 S22: -0.1849 S23: -0.3639 REMARK 3 S31: 0.2466 S32: 0.0954 S33: 0.1288 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.6231 31.0068 -8.7480 REMARK 3 T TENSOR REMARK 3 T11: 0.1755 T22: 0.1912 REMARK 3 T33: 0.2138 T12: -0.0380 REMARK 3 T13: 0.0130 T23: 0.0302 REMARK 3 L TENSOR REMARK 3 L11: 0.2474 L22: 0.1748 REMARK 3 L33: 0.1495 L12: 0.1557 REMARK 3 L13: -0.0037 L23: 0.1325 REMARK 3 S TENSOR REMARK 3 S11: -0.2075 S12: -0.0255 S13: -0.1464 REMARK 3 S21: -0.1816 S22: 0.1138 S23: 0.0243 REMARK 3 S31: 0.1080 S32: -0.0910 S33: -0.0062 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 19 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.1023 30.4303 -0.5921 REMARK 3 T TENSOR REMARK 3 T11: 0.1953 T22: 0.2210 REMARK 3 T33: 0.1874 T12: -0.0486 REMARK 3 T13: 0.0303 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 0.3180 L22: 0.2167 REMARK 3 L33: 0.0432 L12: 0.1143 REMARK 3 L13: 0.0366 L23: -0.0883 REMARK 3 S TENSOR REMARK 3 S11: -0.0825 S12: -0.0772 S13: 0.0036 REMARK 3 S21: 0.0790 S22: 0.0311 S23: 0.1466 REMARK 3 S31: 0.1396 S32: -0.1547 S33: 0.0002 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 41 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.9702 37.9582 0.3020 REMARK 3 T TENSOR REMARK 3 T11: 0.1904 T22: 0.2173 REMARK 3 T33: 0.1683 T12: -0.0550 REMARK 3 T13: -0.0044 T23: -0.0153 REMARK 3 L TENSOR REMARK 3 L11: 0.0531 L22: 0.0771 REMARK 3 L33: 0.0223 L12: -0.0496 REMARK 3 L13: -0.0018 L23: -0.0094 REMARK 3 S TENSOR REMARK 3 S11: 0.1662 S12: -0.2335 S13: 0.2898 REMARK 3 S21: 0.0303 S22: -0.0696 S23: 0.0661 REMARK 3 S31: -0.0898 S32: 0.2921 S33: 0.0012 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 55 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.0818 48.2135 -8.8795 REMARK 3 T TENSOR REMARK 3 T11: 0.2338 T22: 0.2106 REMARK 3 T33: 0.3477 T12: -0.0280 REMARK 3 T13: 0.0144 T23: 0.0995 REMARK 3 L TENSOR REMARK 3 L11: 0.0053 L22: -0.0005 REMARK 3 L33: 0.1762 L12: 0.0047 REMARK 3 L13: -0.0034 L23: -0.0053 REMARK 3 S TENSOR REMARK 3 S11: 0.0260 S12: 0.2333 S13: 0.4634 REMARK 3 S21: -0.2380 S22: -0.0422 S23: -0.1813 REMARK 3 S31: 0.1368 S32: 0.2454 S33: 0.0122 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 66 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.6252 48.6031 -0.4788 REMARK 3 T TENSOR REMARK 3 T11: 0.2297 T22: 0.2422 REMARK 3 T33: 0.4841 T12: 0.0024 REMARK 3 T13: 0.0447 T23: -0.0808 REMARK 3 L TENSOR REMARK 3 L11: 1.7182 L22: 0.3323 REMARK 3 L33: 0.5071 L12: 0.2102 REMARK 3 L13: 0.1177 L23: -0.3452 REMARK 3 S TENSOR REMARK 3 S11: 0.2820 S12: -0.6041 S13: 0.9155 REMARK 3 S21: 0.1512 S22: -0.1284 S23: 0.5174 REMARK 3 S31: -0.1216 S32: -0.2653 S33: 0.1551 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6GZA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1200010772. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-AUG-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : POINTLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39681 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.890 REMARK 200 RESOLUTION RANGE LOW (A) : 35.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.89 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.99 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXDE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 37 MG/ML PROTEIN, 4% PEG 3350, 0.1 M REMARK 280 HEPES PH 8.2, 5 MM COCL2, 5 MM CDCL2, 5 MM MGCL2 AND 5 MM NICL2, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 25.68933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 51.37867 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 51.37867 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 25.68933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 4 88.99 -152.80 REMARK 500 ASN B 4 88.47 -157.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 101 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 1 N REMARK 620 2 SER A 1 O 75.3 REMARK 620 3 ARG A 32 O 94.8 89.3 REMARK 620 4 SER B 1 N 135.2 81.1 47.0 REMARK 620 5 SER B 1 O 134.9 83.7 44.8 3.2 REMARK 620 6 ARG B 32 O 135.5 80.0 48.1 1.5 4.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CO A 101 DBREF1 6GZA A 1 87 UNP A0A220A2R8_9GAMR DBREF2 6GZA A A0A220A2R8 346 432 DBREF1 6GZA B 1 87 UNP A0A220A2R8_9GAMR DBREF2 6GZA B A0A220A2R8 346 432 SEQRES 1 A 87 SER PRO THR ASN LEU ALA LYS VAL LYS GLY ILE THR GLN SEQRES 2 A 87 GLY PRO ASN GLU SER PRO SER ALA PHE LEU GLU ARG LEU SEQRES 3 A 87 LYS GLU ALA TYR ARG ARG TYR THR PRO TYR ASP PRO GLU SEQRES 4 A 87 ASP PRO GLY GLN GLU THR ASN VAL SER MET SER PHE ILE SEQRES 5 A 87 TRP GLN SER ALA PRO ASP ILE GLY ARG LYS LEU GLU ARG SEQRES 6 A 87 LEU GLU ASP LEU LYS SER LYS THR LEU GLY ASP LEU VAL SEQRES 7 A 87 ARG GLU ALA GLU LYS ILE PHE ASN LYS SEQRES 1 B 87 SER PRO THR ASN LEU ALA LYS VAL LYS GLY ILE THR GLN SEQRES 2 B 87 GLY PRO ASN GLU SER PRO SER ALA PHE LEU GLU ARG LEU SEQRES 3 B 87 LYS GLU ALA TYR ARG ARG TYR THR PRO TYR ASP PRO GLU SEQRES 4 B 87 ASP PRO GLY GLN GLU THR ASN VAL SER MET SER PHE ILE SEQRES 5 B 87 TRP GLN SER ALA PRO ASP ILE GLY ARG LYS LEU GLU ARG SEQRES 6 B 87 LEU GLU ASP LEU LYS SER LYS THR LEU GLY ASP LEU VAL SEQRES 7 B 87 ARG GLU ALA GLU LYS ILE PHE ASN LYS HET CO A 101 1 HETNAM CO COBALT (II) ION FORMUL 3 CO CO 2+ FORMUL 4 HOH *171(H2 O) HELIX 1 AA1 ASN A 4 GLY A 10 1 7 HELIX 2 AA2 SER A 18 THR A 34 1 17 HELIX 3 AA3 ASP A 40 GLY A 42 5 3 HELIX 4 AA4 GLN A 43 SER A 55 1 13 HELIX 5 AA5 ALA A 56 ARG A 65 1 10 HELIX 6 AA6 ASP A 68 LYS A 72 5 5 HELIX 7 AA7 THR A 73 LYS A 87 1 15 HELIX 8 AA8 ASN B 4 GLY B 10 1 7 HELIX 9 AA9 SER B 18 THR B 34 1 17 HELIX 10 AB1 ASP B 40 GLY B 42 5 3 HELIX 11 AB2 GLN B 43 SER B 55 1 13 HELIX 12 AB3 ALA B 56 ARG B 65 1 10 HELIX 13 AB4 ASP B 68 LYS B 72 5 5 HELIX 14 AB5 THR B 73 ASN B 86 1 14 LINK N SER A 1 CO CO A 101 1555 1555 2.28 LINK O SER A 1 CO CO A 101 1555 1555 2.23 LINK O ARG A 32 CO CO A 101 1555 1555 2.25 LINK N SER B 1 CO CO A 101 1555 4455 2.12 LINK O SER B 1 CO CO A 101 1555 4455 2.25 LINK O ARG B 32 CO CO A 101 1555 4455 2.25 SITE 1 AC1 4 SER A 1 ARG A 32 SER B 1 ARG B 32 CRYST1 71.198 71.198 77.068 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014045 0.008109 0.000000 0.00000 SCALE2 0.000000 0.016218 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012976 0.00000