data_6HNJ # _entry.id 6HNJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.315 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6HNJ WWPDB D_1200011961 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6HNJ _pdbx_database_status.recvd_initial_deposition_date 2018-09-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Bradshaw, W.J.' 1 0000-0002-7985-9752 'Kovacs-Simon, A.' 2 ? 'Harmer, N.J.' 3 ? 'Michell, S.L.' 4 ? 'Acharya, K.R.' 5 0000-0002-3009-4058 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Biol.Chem. _citation.journal_id_ASTM JBCHA3 _citation.journal_id_CSD 0071 _citation.journal_id_ISSN 1083-351X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 294 _citation.language ? _citation.page_first 15850 _citation.page_last 15861 _citation.title 'Molecular features of lipoprotein CD0873: A potential vaccine against the human pathogenClostridioides difficile.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1074/jbc.RA119.010120 _citation.pdbx_database_id_PubMed 31420448 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bradshaw, W.J.' 1 ? primary 'Bruxelle, J.F.' 2 ? primary 'Kovacs-Simon, A.' 3 ? primary 'Harmer, N.J.' 4 ? primary 'Janoir, C.' 5 ? primary 'Pechine, S.' 6 ? primary 'Acharya, K.R.' 7 ? primary 'Michell, S.L.' 8 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6HNJ _cell.details ? _cell.formula_units_Z ? _cell.length_a 37.963 _cell.length_a_esd ? _cell.length_b 57.534 _cell.length_b_esd ? _cell.length_c 148.526 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HNJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ABC-type transport system, sugar-family extracellular solute-binding protein' 33905.289 1 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 6 ? ? ? ? 3 non-polymer syn 'TRIETHYLENE GLYCOL' 150.173 1 ? ? ? ? 4 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 1 ? ? ? ? 5 water nat water 18.015 143 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMASQGGDSGNSKQESNSKDKEVKKIGITQLVEHPALDATRTGFVKALEKNGFKDGENIDIDFQNAQNDMPTTQSIASKF ASDKKDLIFAISTPSAQAAFNATKDIPILITAVSDPVAAGLVKTLEKPGTNVSGTSDFVSVDKGLELLKIFAPKAKTIGV MYNTSEVNSKVQVDALKEYASKNGFKVVEKGITTSNEVNQGISSLVGKIDVLYVPTDNLVASSMPIVSKIATENKIPVIA AESGPVEKGALACQGINYEKLGYKTGEMAVKILNGESVSDMPVATSDDTDIIVNEDILKALGMEKPSNENISYVKTKQE ; _entity_poly.pdbx_seq_one_letter_code_can ;SMASQGGDSGNSKQESNSKDKEVKKIGITQLVEHPALDATRTGFVKALEKNGFKDGENIDIDFQNAQNDMPTTQSIASKF ASDKKDLIFAISTPSAQAAFNATKDIPILITAVSDPVAAGLVKTLEKPGTNVSGTSDFVSVDKGLELLKIFAPKAKTIGV MYNTSEVNSKVQVDALKEYASKNGFKVVEKGITTSNEVNQGISSLVGKIDVLYVPTDNLVASSMPIVSKIATENKIPVIA AESGPVEKGALACQGINYEKLGYKTGEMAVKILNGESVSDMPVATSDDTDIIVNEDILKALGMEKPSNENISYVKTKQE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 ALA n 1 4 SER n 1 5 GLN n 1 6 GLY n 1 7 GLY n 1 8 ASP n 1 9 SER n 1 10 GLY n 1 11 ASN n 1 12 SER n 1 13 LYS n 1 14 GLN n 1 15 GLU n 1 16 SER n 1 17 ASN n 1 18 SER n 1 19 LYS n 1 20 ASP n 1 21 LYS n 1 22 GLU n 1 23 VAL n 1 24 LYS n 1 25 LYS n 1 26 ILE n 1 27 GLY n 1 28 ILE n 1 29 THR n 1 30 GLN n 1 31 LEU n 1 32 VAL n 1 33 GLU n 1 34 HIS n 1 35 PRO n 1 36 ALA n 1 37 LEU n 1 38 ASP n 1 39 ALA n 1 40 THR n 1 41 ARG n 1 42 THR n 1 43 GLY n 1 44 PHE n 1 45 VAL n 1 46 LYS n 1 47 ALA n 1 48 LEU n 1 49 GLU n 1 50 LYS n 1 51 ASN n 1 52 GLY n 1 53 PHE n 1 54 LYS n 1 55 ASP n 1 56 GLY n 1 57 GLU n 1 58 ASN n 1 59 ILE n 1 60 ASP n 1 61 ILE n 1 62 ASP n 1 63 PHE n 1 64 GLN n 1 65 ASN n 1 66 ALA n 1 67 GLN n 1 68 ASN n 1 69 ASP n 1 70 MET n 1 71 PRO n 1 72 THR n 1 73 THR n 1 74 GLN n 1 75 SER n 1 76 ILE n 1 77 ALA n 1 78 SER n 1 79 LYS n 1 80 PHE n 1 81 ALA n 1 82 SER n 1 83 ASP n 1 84 LYS n 1 85 LYS n 1 86 ASP n 1 87 LEU n 1 88 ILE n 1 89 PHE n 1 90 ALA n 1 91 ILE n 1 92 SER n 1 93 THR n 1 94 PRO n 1 95 SER n 1 96 ALA n 1 97 GLN n 1 98 ALA n 1 99 ALA n 1 100 PHE n 1 101 ASN n 1 102 ALA n 1 103 THR n 1 104 LYS n 1 105 ASP n 1 106 ILE n 1 107 PRO n 1 108 ILE n 1 109 LEU n 1 110 ILE n 1 111 THR n 1 112 ALA n 1 113 VAL n 1 114 SER n 1 115 ASP n 1 116 PRO n 1 117 VAL n 1 118 ALA n 1 119 ALA n 1 120 GLY n 1 121 LEU n 1 122 VAL n 1 123 LYS n 1 124 THR n 1 125 LEU n 1 126 GLU n 1 127 LYS n 1 128 PRO n 1 129 GLY n 1 130 THR n 1 131 ASN n 1 132 VAL n 1 133 SER n 1 134 GLY n 1 135 THR n 1 136 SER n 1 137 ASP n 1 138 PHE n 1 139 VAL n 1 140 SER n 1 141 VAL n 1 142 ASP n 1 143 LYS n 1 144 GLY n 1 145 LEU n 1 146 GLU n 1 147 LEU n 1 148 LEU n 1 149 LYS n 1 150 ILE n 1 151 PHE n 1 152 ALA n 1 153 PRO n 1 154 LYS n 1 155 ALA n 1 156 LYS n 1 157 THR n 1 158 ILE n 1 159 GLY n 1 160 VAL n 1 161 MET n 1 162 TYR n 1 163 ASN n 1 164 THR n 1 165 SER n 1 166 GLU n 1 167 VAL n 1 168 ASN n 1 169 SER n 1 170 LYS n 1 171 VAL n 1 172 GLN n 1 173 VAL n 1 174 ASP n 1 175 ALA n 1 176 LEU n 1 177 LYS n 1 178 GLU n 1 179 TYR n 1 180 ALA n 1 181 SER n 1 182 LYS n 1 183 ASN n 1 184 GLY n 1 185 PHE n 1 186 LYS n 1 187 VAL n 1 188 VAL n 1 189 GLU n 1 190 LYS n 1 191 GLY n 1 192 ILE n 1 193 THR n 1 194 THR n 1 195 SER n 1 196 ASN n 1 197 GLU n 1 198 VAL n 1 199 ASN n 1 200 GLN n 1 201 GLY n 1 202 ILE n 1 203 SER n 1 204 SER n 1 205 LEU n 1 206 VAL n 1 207 GLY n 1 208 LYS n 1 209 ILE n 1 210 ASP n 1 211 VAL n 1 212 LEU n 1 213 TYR n 1 214 VAL n 1 215 PRO n 1 216 THR n 1 217 ASP n 1 218 ASN n 1 219 LEU n 1 220 VAL n 1 221 ALA n 1 222 SER n 1 223 SER n 1 224 MET n 1 225 PRO n 1 226 ILE n 1 227 VAL n 1 228 SER n 1 229 LYS n 1 230 ILE n 1 231 ALA n 1 232 THR n 1 233 GLU n 1 234 ASN n 1 235 LYS n 1 236 ILE n 1 237 PRO n 1 238 VAL n 1 239 ILE n 1 240 ALA n 1 241 ALA n 1 242 GLU n 1 243 SER n 1 244 GLY n 1 245 PRO n 1 246 VAL n 1 247 GLU n 1 248 LYS n 1 249 GLY n 1 250 ALA n 1 251 LEU n 1 252 ALA n 1 253 CYS n 1 254 GLN n 1 255 GLY n 1 256 ILE n 1 257 ASN n 1 258 TYR n 1 259 GLU n 1 260 LYS n 1 261 LEU n 1 262 GLY n 1 263 TYR n 1 264 LYS n 1 265 THR n 1 266 GLY n 1 267 GLU n 1 268 MET n 1 269 ALA n 1 270 VAL n 1 271 LYS n 1 272 ILE n 1 273 LEU n 1 274 ASN n 1 275 GLY n 1 276 GLU n 1 277 SER n 1 278 VAL n 1 279 SER n 1 280 ASP n 1 281 MET n 1 282 PRO n 1 283 VAL n 1 284 ALA n 1 285 THR n 1 286 SER n 1 287 ASP n 1 288 ASP n 1 289 THR n 1 290 ASP n 1 291 ILE n 1 292 ILE n 1 293 VAL n 1 294 ASN n 1 295 GLU n 1 296 ASP n 1 297 ILE n 1 298 LEU n 1 299 LYS n 1 300 ALA n 1 301 LEU n 1 302 GLY n 1 303 MET n 1 304 GLU n 1 305 LYS n 1 306 PRO n 1 307 SER n 1 308 ASN n 1 309 GLU n 1 310 ASN n 1 311 ILE n 1 312 SER n 1 313 TYR n 1 314 VAL n 1 315 LYS n 1 316 THR n 1 317 LYS n 1 318 GLN n 1 319 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 319 _entity_src_gen.gene_src_common_name 'Clostridium difficile' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CD630_08730 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Peptoclostridium difficile 630' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 272563 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pNIC28-Bsa4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q18A65_PEPD6 _struct_ref.pdbx_db_accession Q18A65 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;CSQGGDSGNSKQESNSKDKEVKKIGITQLVEHPALDATRTGFVKALEKNGFKDGENIDIDFQNAQNDMPTTQSIASKFAS DKKDLIFAISTPSAQAAFNATKDIPILITAVSDPVAAGLVKTLEKPGTNVSGTSDFVSVDKGLELLKIFAPKAKTIGVMY NTSEVNSKVQVDALKEYASKNGFKVVEKGITTSNEVNQGISSLVGKIDVLYVPTDNLVASSMPIVSKIATENKIPVIAAE SGPVEKGALACQGINYEKLGYKTGEMAVKILNGESVSDMPVATSDDTDIIVNEDILKALGMEKPSNENISYVKTKQE ; _struct_ref.pdbx_align_begin 24 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6HNJ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 319 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q18A65 _struct_ref_seq.db_align_beg 24 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 340 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 24 _struct_ref_seq.pdbx_auth_seq_align_end 340 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6HNJ SER A 1 ? UNP Q18A65 ? ? 'expression tag' 22 1 1 6HNJ MET A 2 ? UNP Q18A65 ? ? 'expression tag' 23 2 1 6HNJ ALA A 3 ? UNP Q18A65 CYS 24 'engineered mutation' 24 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PGE non-polymer . 'TRIETHYLENE GLYCOL' ? 'C6 H14 O4' 150.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6HNJ _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.39 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.58 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M MES pH 6.5, with 2% each of PEG 400, 500 MME, 600, 1000, 2000, 3350, 4000, 5000 MME, 6000, 8000 and 10,000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-03-04 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9763 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I03' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9763 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I03 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6HNJ _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.80 _reflns.d_resolution_low 74.26 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 31122 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 19.8 _reflns.pdbx_Rmerge_I_obs 0.237 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7.0 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.250 _reflns.pdbx_Rpim_I_all 0.077 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.993 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.84 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.8 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1758 _reflns_shell.percent_possible_all 98.3 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.483 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 20.0 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 1.561 _reflns_shell.pdbx_Rpim_I_all 0.483 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.721 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 2.69 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] 0.12 _refine.aniso_B[2][3] -0.00 _refine.aniso_B[3][3] -2.81 _refine.B_iso_max ? _refine.B_iso_mean 30.663 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.958 _refine.correlation_coeff_Fo_to_Fc_free 0.941 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6HNJ _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.80 _refine.ls_d_res_low 74.26 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 29490 _refine.ls_number_reflns_R_free 1546 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.96 _refine.ls_percent_reflns_R_free 5.0 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.20593 _refine.ls_R_factor_R_free 0.23898 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.20414 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.131 _refine.pdbx_overall_ESU_R_Free 0.125 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 3.830 _refine.overall_SU_ML 0.110 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 2218 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 41 _refine_hist.number_atoms_solvent 143 _refine_hist.number_atoms_total 2402 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 74.26 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.012 0.020 2299 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 2242 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.557 1.990 3100 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.934 3.000 5255 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.858 5.000 304 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 42.956 27.831 83 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 14.624 15.000 421 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 14.866 15.000 1 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.086 0.200 375 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 0.021 2499 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 362 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 1.904 2.801 1195 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.895 2.798 1194 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 2.846 4.188 1494 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 2.847 4.192 1495 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 2.880 3.311 1104 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 2.877 3.311 1104 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 4.557 4.728 1603 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 5.881 34.348 2447 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 5.865 34.234 2428 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.847 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 110 _refine_ls_shell.number_reflns_R_work 2099 _refine_ls_shell.percent_reflns_obs 99.55 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.419 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.383 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6HNJ _struct.title 'The ligand-bound, open structure of CD0873, a substrate binding protein with adhesive properties from Clostridium difficile.' _struct.pdbx_descriptor 'ABC-type transport system, sugar-family extracellular solute-binding protein' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6HNJ _struct_keywords.text 'Substrate binding protein, adhesin, tyrosine binding protein, lipoprotein, TRANSPORT PROTEIN' _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 3 ? I N N 4 ? J N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 HIS A 34 ? ASN A 51 ? HIS A 55 ASN A 72 1 ? 18 HELX_P HELX_P2 AA2 ASP A 69 ? LYS A 84 ? ASP A 90 LYS A 105 1 ? 16 HELX_P HELX_P3 AA3 SER A 92 ? THR A 103 ? SER A 113 THR A 124 1 ? 12 HELX_P HELX_P4 AA4 SER A 140 ? GLU A 146 ? SER A 161 GLU A 167 1 ? 7 HELX_P HELX_P5 AA5 LEU A 147 ? ALA A 152 ? LEU A 168 ALA A 173 1 ? 6 HELX_P HELX_P6 AA6 GLU A 166 ? GLY A 184 ? GLU A 187 GLY A 205 1 ? 19 HELX_P HELX_P7 AA7 THR A 194 ? ASN A 196 ? THR A 215 ASN A 217 5 ? 3 HELX_P HELX_P8 AA8 GLU A 197 ? VAL A 206 ? GLU A 218 VAL A 227 1 ? 10 HELX_P HELX_P9 AA9 ASP A 217 ? SER A 222 ? ASP A 238 SER A 243 1 ? 6 HELX_P HELX_P10 AB1 SER A 223 ? ASN A 234 ? SER A 244 ASN A 255 1 ? 12 HELX_P HELX_P11 AB2 GLU A 242 ? LYS A 248 ? GLU A 263 LYS A 269 1 ? 7 HELX_P HELX_P12 AB3 ASN A 257 ? ASN A 274 ? ASN A 278 ASN A 295 1 ? 18 HELX_P HELX_P13 AB4 SER A 277 ? MET A 281 ? SER A 298 MET A 302 5 ? 5 HELX_P HELX_P14 AB5 GLU A 295 ? LEU A 301 ? GLU A 316 LEU A 322 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 4 ? AA3 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA3 1 2 ? anti-parallel AA3 2 3 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 59 ? ASN A 65 ? ILE A 80 ASN A 86 AA1 2 LYS A 24 ? GLN A 30 ? LYS A 45 GLN A 51 AA1 3 LEU A 87 ? ILE A 91 ? LEU A 108 ILE A 112 AA1 4 ILE A 108 ? VAL A 113 ? ILE A 129 VAL A 134 AA1 5 VAL A 132 ? SER A 136 ? VAL A 153 SER A 157 AA2 1 LYS A 186 ? ILE A 192 ? LYS A 207 ILE A 213 AA2 2 THR A 157 ? ASN A 163 ? THR A 178 ASN A 184 AA2 3 VAL A 211 ? VAL A 214 ? VAL A 232 VAL A 235 AA2 4 VAL A 238 ? ALA A 240 ? VAL A 259 ALA A 261 AA3 1 ALA A 252 ? ILE A 256 ? ALA A 273 ILE A 277 AA3 2 THR A 289 ? ASN A 294 ? THR A 310 ASN A 315 AA3 3 ILE A 311 ? VAL A 314 ? ILE A 332 VAL A 335 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ASP A 62 ? O ASP A 83 N ILE A 26 ? N ILE A 47 AA1 2 3 N THR A 29 ? N THR A 50 O ILE A 91 ? O ILE A 112 AA1 3 4 N ILE A 88 ? N ILE A 109 O LEU A 109 ? O LEU A 130 AA1 4 5 N ILE A 110 ? N ILE A 131 O SER A 133 ? O SER A 154 AA2 1 2 O LYS A 186 ? O LYS A 207 N ILE A 158 ? N ILE A 179 AA2 2 3 N GLY A 159 ? N GLY A 180 O VAL A 211 ? O VAL A 232 AA2 3 4 N LEU A 212 ? N LEU A 233 O ILE A 239 ? O ILE A 260 AA3 1 2 N CYS A 253 ? N CYS A 274 O ILE A 292 ? O ILE A 313 AA3 2 3 N ILE A 291 ? N ILE A 312 O SER A 312 ? O SER A 333 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 401 ? 1 'binding site for residue EDO A 401' AC2 Software A EDO 402 ? 1 'binding site for residue EDO A 402' AC3 Software A EDO 403 ? 4 'binding site for residue EDO A 403' AC4 Software A EDO 404 ? 2 'binding site for residue EDO A 404' AC5 Software A EDO 405 ? 4 'binding site for residue EDO A 405' AC6 Software A EDO 406 ? 3 'binding site for residue EDO A 406' AC7 Software A PGE 407 ? 4 'binding site for residue PGE A 407' AC8 Software A PEG 408 ? 3 'binding site for residue PEG A 408' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 1 LYS A 104 ? LYS A 125 . ? 3_445 ? 2 AC2 1 LEU A 125 ? LEU A 146 . ? 1_555 ? 3 AC3 4 GLY A 120 ? GLY A 141 . ? 1_555 ? 4 AC3 4 VAL A 122 ? VAL A 143 . ? 1_555 ? 5 AC3 4 LYS A 123 ? LYS A 144 . ? 1_555 ? 6 AC3 4 HOH J . ? HOH A 533 . ? 1_555 ? 7 AC4 2 THR A 157 ? THR A 178 . ? 1_555 ? 8 AC4 2 ASP A 210 ? ASP A 231 . ? 1_555 ? 9 AC5 4 ALA A 152 ? ALA A 173 . ? 1_555 ? 10 AC5 4 PRO A 153 ? PRO A 174 . ? 1_555 ? 11 AC5 4 LYS A 154 ? LYS A 175 . ? 1_555 ? 12 AC5 4 ALA A 155 ? ALA A 176 . ? 1_555 ? 13 AC6 3 SER A 92 ? SER A 113 . ? 1_555 ? 14 AC6 3 THR A 93 ? THR A 114 . ? 1_555 ? 15 AC6 3 ALA A 112 ? ALA A 133 . ? 1_555 ? 16 AC7 4 LEU A 37 ? LEU A 58 . ? 1_555 ? 17 AC7 4 SER A 243 ? SER A 264 . ? 1_555 ? 18 AC7 4 GLY A 244 ? GLY A 265 . ? 1_555 ? 19 AC7 4 TYR A 258 ? TYR A 279 . ? 1_555 ? 20 AC8 3 ILE A 150 ? ILE A 171 . ? 1_555 ? 21 AC8 3 GLU A 304 ? GLU A 325 . ? 1_555 ? 22 AC8 3 PRO A 306 ? PRO A 327 . ? 1_555 ? # _atom_sites.entry_id 6HNJ _atom_sites.fract_transf_matrix[1][1] 0.026341 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017381 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006733 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 22 ? ? ? A . n A 1 2 MET 2 23 ? ? ? A . n A 1 3 ALA 3 24 ? ? ? A . n A 1 4 SER 4 25 ? ? ? A . n A 1 5 GLN 5 26 ? ? ? A . n A 1 6 GLY 6 27 ? ? ? A . n A 1 7 GLY 7 28 ? ? ? A . n A 1 8 ASP 8 29 ? ? ? A . n A 1 9 SER 9 30 ? ? ? A . n A 1 10 GLY 10 31 ? ? ? A . n A 1 11 ASN 11 32 ? ? ? A . n A 1 12 SER 12 33 ? ? ? A . n A 1 13 LYS 13 34 ? ? ? A . n A 1 14 GLN 14 35 ? ? ? A . n A 1 15 GLU 15 36 ? ? ? A . n A 1 16 SER 16 37 ? ? ? A . n A 1 17 ASN 17 38 ? ? ? A . n A 1 18 SER 18 39 ? ? ? A . n A 1 19 LYS 19 40 ? ? ? A . n A 1 20 ASP 20 41 ? ? ? A . n A 1 21 LYS 21 42 ? ? ? A . n A 1 22 GLU 22 43 43 GLU GLU A . n A 1 23 VAL 23 44 44 VAL VAL A . n A 1 24 LYS 24 45 45 LYS LYS A . n A 1 25 LYS 25 46 46 LYS LYS A . n A 1 26 ILE 26 47 47 ILE ILE A . n A 1 27 GLY 27 48 48 GLY GLY A . n A 1 28 ILE 28 49 49 ILE ILE A . n A 1 29 THR 29 50 50 THR THR A . n A 1 30 GLN 30 51 51 GLN GLN A . n A 1 31 LEU 31 52 52 LEU LEU A . n A 1 32 VAL 32 53 53 VAL VAL A . n A 1 33 GLU 33 54 54 GLU GLU A . n A 1 34 HIS 34 55 55 HIS HIS A . n A 1 35 PRO 35 56 56 PRO PRO A . n A 1 36 ALA 36 57 57 ALA ALA A . n A 1 37 LEU 37 58 58 LEU LEU A . n A 1 38 ASP 38 59 59 ASP ASP A . n A 1 39 ALA 39 60 60 ALA ALA A . n A 1 40 THR 40 61 61 THR THR A . n A 1 41 ARG 41 62 62 ARG ARG A . n A 1 42 THR 42 63 63 THR THR A . n A 1 43 GLY 43 64 64 GLY GLY A . n A 1 44 PHE 44 65 65 PHE PHE A . n A 1 45 VAL 45 66 66 VAL VAL A . n A 1 46 LYS 46 67 67 LYS LYS A . n A 1 47 ALA 47 68 68 ALA ALA A . n A 1 48 LEU 48 69 69 LEU LEU A . n A 1 49 GLU 49 70 70 GLU GLU A . n A 1 50 LYS 50 71 71 LYS LYS A . n A 1 51 ASN 51 72 72 ASN ASN A . n A 1 52 GLY 52 73 73 GLY GLY A . n A 1 53 PHE 53 74 74 PHE PHE A . n A 1 54 LYS 54 75 75 LYS LYS A . n A 1 55 ASP 55 76 76 ASP ASP A . n A 1 56 GLY 56 77 77 GLY GLY A . n A 1 57 GLU 57 78 78 GLU GLU A . n A 1 58 ASN 58 79 79 ASN ASN A . n A 1 59 ILE 59 80 80 ILE ILE A . n A 1 60 ASP 60 81 81 ASP ASP A . n A 1 61 ILE 61 82 82 ILE ILE A . n A 1 62 ASP 62 83 83 ASP ASP A . n A 1 63 PHE 63 84 84 PHE PHE A . n A 1 64 GLN 64 85 85 GLN GLN A . n A 1 65 ASN 65 86 86 ASN ASN A . n A 1 66 ALA 66 87 87 ALA ALA A . n A 1 67 GLN 67 88 88 GLN GLN A . n A 1 68 ASN 68 89 89 ASN ASN A . n A 1 69 ASP 69 90 90 ASP ASP A . n A 1 70 MET 70 91 91 MET MET A . n A 1 71 PRO 71 92 92 PRO PRO A . n A 1 72 THR 72 93 93 THR THR A . n A 1 73 THR 73 94 94 THR THR A . n A 1 74 GLN 74 95 95 GLN GLN A . n A 1 75 SER 75 96 96 SER SER A . n A 1 76 ILE 76 97 97 ILE ILE A . n A 1 77 ALA 77 98 98 ALA ALA A . n A 1 78 SER 78 99 99 SER SER A . n A 1 79 LYS 79 100 100 LYS LYS A . n A 1 80 PHE 80 101 101 PHE PHE A . n A 1 81 ALA 81 102 102 ALA ALA A . n A 1 82 SER 82 103 103 SER SER A . n A 1 83 ASP 83 104 104 ASP ASP A . n A 1 84 LYS 84 105 105 LYS LYS A . n A 1 85 LYS 85 106 106 LYS LYS A . n A 1 86 ASP 86 107 107 ASP ASP A . n A 1 87 LEU 87 108 108 LEU LEU A . n A 1 88 ILE 88 109 109 ILE ILE A . n A 1 89 PHE 89 110 110 PHE PHE A . n A 1 90 ALA 90 111 111 ALA ALA A . n A 1 91 ILE 91 112 112 ILE ILE A . n A 1 92 SER 92 113 113 SER SER A . n A 1 93 THR 93 114 114 THR THR A . n A 1 94 PRO 94 115 115 PRO PRO A . n A 1 95 SER 95 116 116 SER SER A . n A 1 96 ALA 96 117 117 ALA ALA A . n A 1 97 GLN 97 118 118 GLN GLN A . n A 1 98 ALA 98 119 119 ALA ALA A . n A 1 99 ALA 99 120 120 ALA ALA A . n A 1 100 PHE 100 121 121 PHE PHE A . n A 1 101 ASN 101 122 122 ASN ASN A . n A 1 102 ALA 102 123 123 ALA ALA A . n A 1 103 THR 103 124 124 THR THR A . n A 1 104 LYS 104 125 125 LYS LYS A . n A 1 105 ASP 105 126 126 ASP ASP A . n A 1 106 ILE 106 127 127 ILE ILE A . n A 1 107 PRO 107 128 128 PRO PRO A . n A 1 108 ILE 108 129 129 ILE ILE A . n A 1 109 LEU 109 130 130 LEU LEU A . n A 1 110 ILE 110 131 131 ILE ILE A . n A 1 111 THR 111 132 132 THR THR A . n A 1 112 ALA 112 133 133 ALA ALA A . n A 1 113 VAL 113 134 134 VAL VAL A . n A 1 114 SER 114 135 135 SER SER A . n A 1 115 ASP 115 136 136 ASP ASP A . n A 1 116 PRO 116 137 137 PRO PRO A . n A 1 117 VAL 117 138 138 VAL VAL A . n A 1 118 ALA 118 139 139 ALA ALA A . n A 1 119 ALA 119 140 140 ALA ALA A . n A 1 120 GLY 120 141 141 GLY GLY A . n A 1 121 LEU 121 142 142 LEU LEU A . n A 1 122 VAL 122 143 143 VAL VAL A . n A 1 123 LYS 123 144 144 LYS LYS A . n A 1 124 THR 124 145 145 THR THR A . n A 1 125 LEU 125 146 146 LEU LEU A . n A 1 126 GLU 126 147 147 GLU GLU A . n A 1 127 LYS 127 148 148 LYS LYS A . n A 1 128 PRO 128 149 149 PRO PRO A . n A 1 129 GLY 129 150 150 GLY GLY A . n A 1 130 THR 130 151 151 THR THR A . n A 1 131 ASN 131 152 152 ASN ASN A . n A 1 132 VAL 132 153 153 VAL VAL A . n A 1 133 SER 133 154 154 SER SER A . n A 1 134 GLY 134 155 155 GLY GLY A . n A 1 135 THR 135 156 156 THR THR A . n A 1 136 SER 136 157 157 SER SER A . n A 1 137 ASP 137 158 158 ASP ASP A . n A 1 138 PHE 138 159 159 PHE PHE A . n A 1 139 VAL 139 160 160 VAL VAL A . n A 1 140 SER 140 161 161 SER SER A . n A 1 141 VAL 141 162 162 VAL VAL A . n A 1 142 ASP 142 163 163 ASP ASP A . n A 1 143 LYS 143 164 164 LYS LYS A . n A 1 144 GLY 144 165 165 GLY GLY A . n A 1 145 LEU 145 166 166 LEU LEU A . n A 1 146 GLU 146 167 167 GLU GLU A . n A 1 147 LEU 147 168 168 LEU LEU A . n A 1 148 LEU 148 169 169 LEU LEU A . n A 1 149 LYS 149 170 170 LYS LYS A . n A 1 150 ILE 150 171 171 ILE ILE A . n A 1 151 PHE 151 172 172 PHE PHE A . n A 1 152 ALA 152 173 173 ALA ALA A . n A 1 153 PRO 153 174 174 PRO PRO A . n A 1 154 LYS 154 175 175 LYS LYS A . n A 1 155 ALA 155 176 176 ALA ALA A . n A 1 156 LYS 156 177 177 LYS LYS A . n A 1 157 THR 157 178 178 THR THR A . n A 1 158 ILE 158 179 179 ILE ILE A . n A 1 159 GLY 159 180 180 GLY GLY A . n A 1 160 VAL 160 181 181 VAL VAL A . n A 1 161 MET 161 182 182 MET MET A . n A 1 162 TYR 162 183 183 TYR TYR A . n A 1 163 ASN 163 184 184 ASN ASN A . n A 1 164 THR 164 185 185 THR THR A . n A 1 165 SER 165 186 186 SER SER A . n A 1 166 GLU 166 187 187 GLU GLU A . n A 1 167 VAL 167 188 188 VAL VAL A . n A 1 168 ASN 168 189 189 ASN ASN A . n A 1 169 SER 169 190 190 SER SER A . n A 1 170 LYS 170 191 191 LYS LYS A . n A 1 171 VAL 171 192 192 VAL VAL A . n A 1 172 GLN 172 193 193 GLN GLN A . n A 1 173 VAL 173 194 194 VAL VAL A . n A 1 174 ASP 174 195 195 ASP ASP A . n A 1 175 ALA 175 196 196 ALA ALA A . n A 1 176 LEU 176 197 197 LEU LEU A . n A 1 177 LYS 177 198 198 LYS LYS A . n A 1 178 GLU 178 199 199 GLU GLU A . n A 1 179 TYR 179 200 200 TYR TYR A . n A 1 180 ALA 180 201 201 ALA ALA A . n A 1 181 SER 181 202 202 SER SER A . n A 1 182 LYS 182 203 203 LYS LYS A . n A 1 183 ASN 183 204 204 ASN ASN A . n A 1 184 GLY 184 205 205 GLY GLY A . n A 1 185 PHE 185 206 206 PHE PHE A . n A 1 186 LYS 186 207 207 LYS LYS A . n A 1 187 VAL 187 208 208 VAL VAL A . n A 1 188 VAL 188 209 209 VAL VAL A . n A 1 189 GLU 189 210 210 GLU GLU A . n A 1 190 LYS 190 211 211 LYS LYS A . n A 1 191 GLY 191 212 212 GLY GLY A . n A 1 192 ILE 192 213 213 ILE ILE A . n A 1 193 THR 193 214 214 THR THR A . n A 1 194 THR 194 215 215 THR THR A . n A 1 195 SER 195 216 216 SER SER A . n A 1 196 ASN 196 217 217 ASN ASN A . n A 1 197 GLU 197 218 218 GLU GLU A . n A 1 198 VAL 198 219 219 VAL VAL A . n A 1 199 ASN 199 220 220 ASN ASN A . n A 1 200 GLN 200 221 221 GLN GLN A . n A 1 201 GLY 201 222 222 GLY GLY A . n A 1 202 ILE 202 223 223 ILE ILE A . n A 1 203 SER 203 224 224 SER SER A . n A 1 204 SER 204 225 225 SER SER A . n A 1 205 LEU 205 226 226 LEU LEU A . n A 1 206 VAL 206 227 227 VAL VAL A . n A 1 207 GLY 207 228 228 GLY GLY A . n A 1 208 LYS 208 229 229 LYS LYS A . n A 1 209 ILE 209 230 230 ILE ILE A . n A 1 210 ASP 210 231 231 ASP ASP A . n A 1 211 VAL 211 232 232 VAL VAL A . n A 1 212 LEU 212 233 233 LEU LEU A . n A 1 213 TYR 213 234 234 TYR TYR A . n A 1 214 VAL 214 235 235 VAL VAL A . n A 1 215 PRO 215 236 236 PRO PRO A . n A 1 216 THR 216 237 237 THR THR A . n A 1 217 ASP 217 238 238 ASP ASP A . n A 1 218 ASN 218 239 239 ASN ASN A . n A 1 219 LEU 219 240 240 LEU LEU A . n A 1 220 VAL 220 241 241 VAL VAL A . n A 1 221 ALA 221 242 242 ALA ALA A . n A 1 222 SER 222 243 243 SER SER A . n A 1 223 SER 223 244 244 SER SER A . n A 1 224 MET 224 245 245 MET MET A . n A 1 225 PRO 225 246 246 PRO PRO A . n A 1 226 ILE 226 247 247 ILE ILE A . n A 1 227 VAL 227 248 248 VAL VAL A . n A 1 228 SER 228 249 249 SER SER A . n A 1 229 LYS 229 250 250 LYS LYS A . n A 1 230 ILE 230 251 251 ILE ILE A . n A 1 231 ALA 231 252 252 ALA ALA A . n A 1 232 THR 232 253 253 THR THR A . n A 1 233 GLU 233 254 254 GLU GLU A . n A 1 234 ASN 234 255 255 ASN ASN A . n A 1 235 LYS 235 256 256 LYS LYS A . n A 1 236 ILE 236 257 257 ILE ILE A . n A 1 237 PRO 237 258 258 PRO PRO A . n A 1 238 VAL 238 259 259 VAL VAL A . n A 1 239 ILE 239 260 260 ILE ILE A . n A 1 240 ALA 240 261 261 ALA ALA A . n A 1 241 ALA 241 262 262 ALA ALA A . n A 1 242 GLU 242 263 263 GLU GLU A . n A 1 243 SER 243 264 264 SER SER A . n A 1 244 GLY 244 265 265 GLY GLY A . n A 1 245 PRO 245 266 266 PRO PRO A . n A 1 246 VAL 246 267 267 VAL VAL A . n A 1 247 GLU 247 268 268 GLU GLU A . n A 1 248 LYS 248 269 269 LYS LYS A . n A 1 249 GLY 249 270 270 GLY GLY A . n A 1 250 ALA 250 271 271 ALA ALA A . n A 1 251 LEU 251 272 272 LEU LEU A . n A 1 252 ALA 252 273 273 ALA ALA A . n A 1 253 CYS 253 274 274 CYS CYS A . n A 1 254 GLN 254 275 275 GLN GLN A . n A 1 255 GLY 255 276 276 GLY GLY A . n A 1 256 ILE 256 277 277 ILE ILE A . n A 1 257 ASN 257 278 278 ASN ASN A . n A 1 258 TYR 258 279 279 TYR TYR A . n A 1 259 GLU 259 280 280 GLU GLU A . n A 1 260 LYS 260 281 281 LYS LYS A . n A 1 261 LEU 261 282 282 LEU LEU A . n A 1 262 GLY 262 283 283 GLY GLY A . n A 1 263 TYR 263 284 284 TYR TYR A . n A 1 264 LYS 264 285 285 LYS LYS A . n A 1 265 THR 265 286 286 THR THR A . n A 1 266 GLY 266 287 287 GLY GLY A . n A 1 267 GLU 267 288 288 GLU GLU A . n A 1 268 MET 268 289 289 MET MET A . n A 1 269 ALA 269 290 290 ALA ALA A . n A 1 270 VAL 270 291 291 VAL VAL A . n A 1 271 LYS 271 292 292 LYS LYS A . n A 1 272 ILE 272 293 293 ILE ILE A . n A 1 273 LEU 273 294 294 LEU LEU A . n A 1 274 ASN 274 295 295 ASN ASN A . n A 1 275 GLY 275 296 296 GLY GLY A . n A 1 276 GLU 276 297 297 GLU GLU A . n A 1 277 SER 277 298 298 SER SER A . n A 1 278 VAL 278 299 299 VAL VAL A . n A 1 279 SER 279 300 300 SER SER A . n A 1 280 ASP 280 301 301 ASP ASP A . n A 1 281 MET 281 302 302 MET MET A . n A 1 282 PRO 282 303 303 PRO PRO A . n A 1 283 VAL 283 304 304 VAL VAL A . n A 1 284 ALA 284 305 305 ALA ALA A . n A 1 285 THR 285 306 306 THR THR A . n A 1 286 SER 286 307 307 SER SER A . n A 1 287 ASP 287 308 308 ASP ASP A . n A 1 288 ASP 288 309 309 ASP ASP A . n A 1 289 THR 289 310 310 THR THR A . n A 1 290 ASP 290 311 311 ASP ASP A . n A 1 291 ILE 291 312 312 ILE ILE A . n A 1 292 ILE 292 313 313 ILE ILE A . n A 1 293 VAL 293 314 314 VAL VAL A . n A 1 294 ASN 294 315 315 ASN ASN A . n A 1 295 GLU 295 316 316 GLU GLU A . n A 1 296 ASP 296 317 317 ASP ASP A . n A 1 297 ILE 297 318 318 ILE ILE A . n A 1 298 LEU 298 319 319 LEU LEU A . n A 1 299 LYS 299 320 320 LYS LYS A . n A 1 300 ALA 300 321 321 ALA ALA A . n A 1 301 LEU 301 322 322 LEU LEU A . n A 1 302 GLY 302 323 323 GLY GLY A . n A 1 303 MET 303 324 324 MET MET A . n A 1 304 GLU 304 325 325 GLU GLU A . n A 1 305 LYS 305 326 326 LYS LYS A . n A 1 306 PRO 306 327 327 PRO PRO A . n A 1 307 SER 307 328 328 SER SER A . n A 1 308 ASN 308 329 329 ASN ASN A . n A 1 309 GLU 309 330 330 GLU GLU A . n A 1 310 ASN 310 331 331 ASN ASN A . n A 1 311 ILE 311 332 332 ILE ILE A . n A 1 312 SER 312 333 333 SER SER A . n A 1 313 TYR 313 334 334 TYR TYR A . n A 1 314 VAL 314 335 335 VAL VAL A . n A 1 315 LYS 315 336 336 LYS LYS A . n A 1 316 THR 316 337 337 THR THR A . n A 1 317 LYS 317 338 338 LYS LYS A . n A 1 318 GLN 318 339 339 GLN GLN A . n A 1 319 GLU 319 340 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 401 1 EDO EDO A . C 2 EDO 1 402 2 EDO EDO A . D 2 EDO 1 403 3 EDO EDO A . E 2 EDO 1 404 4 EDO EDO A . F 2 EDO 1 405 5 EDO EDO A . G 2 EDO 1 406 6 EDO EDO A . H 3 PGE 1 407 1 PGE PGE A . I 4 PEG 1 408 1 PEG PEG A . J 5 HOH 1 501 88 HOH HOH A . J 5 HOH 2 502 107 HOH HOH A . J 5 HOH 3 503 137 HOH HOH A . J 5 HOH 4 504 37 HOH HOH A . J 5 HOH 5 505 95 HOH HOH A . J 5 HOH 6 506 81 HOH HOH A . J 5 HOH 7 507 76 HOH HOH A . J 5 HOH 8 508 124 HOH HOH A . J 5 HOH 9 509 12 HOH HOH A . J 5 HOH 10 510 110 HOH HOH A . J 5 HOH 11 511 123 HOH HOH A . J 5 HOH 12 512 142 HOH HOH A . J 5 HOH 13 513 9 HOH HOH A . J 5 HOH 14 514 66 HOH HOH A . J 5 HOH 15 515 104 HOH HOH A . J 5 HOH 16 516 143 HOH HOH A . J 5 HOH 17 517 75 HOH HOH A . J 5 HOH 18 518 126 HOH HOH A . J 5 HOH 19 519 64 HOH HOH A . J 5 HOH 20 520 36 HOH HOH A . J 5 HOH 21 521 133 HOH HOH A . J 5 HOH 22 522 130 HOH HOH A . J 5 HOH 23 523 79 HOH HOH A . J 5 HOH 24 524 94 HOH HOH A . J 5 HOH 25 525 87 HOH HOH A . J 5 HOH 26 526 34 HOH HOH A . J 5 HOH 27 527 70 HOH HOH A . J 5 HOH 28 528 69 HOH HOH A . J 5 HOH 29 529 74 HOH HOH A . J 5 HOH 30 530 18 HOH HOH A . J 5 HOH 31 531 21 HOH HOH A . J 5 HOH 32 532 32 HOH HOH A . J 5 HOH 33 533 118 HOH HOH A . J 5 HOH 34 534 128 HOH HOH A . J 5 HOH 35 535 35 HOH HOH A . J 5 HOH 36 536 102 HOH HOH A . J 5 HOH 37 537 89 HOH HOH A . J 5 HOH 38 538 48 HOH HOH A . J 5 HOH 39 539 45 HOH HOH A . J 5 HOH 40 540 99 HOH HOH A . J 5 HOH 41 541 38 HOH HOH A . J 5 HOH 42 542 1 HOH HOH A . J 5 HOH 43 543 49 HOH HOH A . J 5 HOH 44 544 58 HOH HOH A . J 5 HOH 45 545 71 HOH HOH A . J 5 HOH 46 546 65 HOH HOH A . J 5 HOH 47 547 27 HOH HOH A . J 5 HOH 48 548 147 HOH HOH A . J 5 HOH 49 549 33 HOH HOH A . J 5 HOH 50 550 2 HOH HOH A . J 5 HOH 51 551 8 HOH HOH A . J 5 HOH 52 552 63 HOH HOH A . J 5 HOH 53 553 139 HOH HOH A . J 5 HOH 54 554 146 HOH HOH A . J 5 HOH 55 555 73 HOH HOH A . J 5 HOH 56 556 28 HOH HOH A . J 5 HOH 57 557 52 HOH HOH A . J 5 HOH 58 558 80 HOH HOH A . J 5 HOH 59 559 23 HOH HOH A . J 5 HOH 60 560 4 HOH HOH A . J 5 HOH 61 561 122 HOH HOH A . J 5 HOH 62 562 26 HOH HOH A . J 5 HOH 63 563 144 HOH HOH A . J 5 HOH 64 564 101 HOH HOH A . J 5 HOH 65 565 136 HOH HOH A . J 5 HOH 66 566 148 HOH HOH A . J 5 HOH 67 567 50 HOH HOH A . J 5 HOH 68 568 120 HOH HOH A . J 5 HOH 69 569 117 HOH HOH A . J 5 HOH 70 570 43 HOH HOH A . J 5 HOH 71 571 54 HOH HOH A . J 5 HOH 72 572 29 HOH HOH A . J 5 HOH 73 573 51 HOH HOH A . J 5 HOH 74 574 97 HOH HOH A . J 5 HOH 75 575 115 HOH HOH A . J 5 HOH 76 576 60 HOH HOH A . J 5 HOH 77 577 119 HOH HOH A . J 5 HOH 78 578 108 HOH HOH A . J 5 HOH 79 579 11 HOH HOH A . J 5 HOH 80 580 98 HOH HOH A . J 5 HOH 81 581 41 HOH HOH A . J 5 HOH 82 582 25 HOH HOH A . J 5 HOH 83 583 20 HOH HOH A . J 5 HOH 84 584 14 HOH HOH A . J 5 HOH 85 585 5 HOH HOH A . J 5 HOH 86 586 3 HOH HOH A . J 5 HOH 87 587 30 HOH HOH A . J 5 HOH 88 588 93 HOH HOH A . J 5 HOH 89 589 91 HOH HOH A . J 5 HOH 90 590 145 HOH HOH A . J 5 HOH 91 591 62 HOH HOH A . J 5 HOH 92 592 129 HOH HOH A . J 5 HOH 93 593 55 HOH HOH A . J 5 HOH 94 594 113 HOH HOH A . J 5 HOH 95 595 100 HOH HOH A . J 5 HOH 96 596 15 HOH HOH A . J 5 HOH 97 597 86 HOH HOH A . J 5 HOH 98 598 53 HOH HOH A . J 5 HOH 99 599 22 HOH HOH A . J 5 HOH 100 600 132 HOH HOH A . J 5 HOH 101 601 114 HOH HOH A . J 5 HOH 102 602 57 HOH HOH A . J 5 HOH 103 603 7 HOH HOH A . J 5 HOH 104 604 17 HOH HOH A . J 5 HOH 105 605 24 HOH HOH A . J 5 HOH 106 606 67 HOH HOH A . J 5 HOH 107 607 6 HOH HOH A . J 5 HOH 108 608 149 HOH HOH A . J 5 HOH 109 609 46 HOH HOH A . J 5 HOH 110 610 77 HOH HOH A . J 5 HOH 111 611 39 HOH HOH A . J 5 HOH 112 612 72 HOH HOH A . J 5 HOH 113 613 90 HOH HOH A . J 5 HOH 114 614 10 HOH HOH A . J 5 HOH 115 615 40 HOH HOH A . J 5 HOH 116 616 44 HOH HOH A . J 5 HOH 117 617 31 HOH HOH A . J 5 HOH 118 618 138 HOH HOH A . J 5 HOH 119 619 96 HOH HOH A . J 5 HOH 120 620 42 HOH HOH A . J 5 HOH 121 621 47 HOH HOH A . J 5 HOH 122 622 68 HOH HOH A . J 5 HOH 123 623 116 HOH HOH A . J 5 HOH 124 624 125 HOH HOH A . J 5 HOH 125 625 61 HOH HOH A . J 5 HOH 126 626 111 HOH HOH A . J 5 HOH 127 627 103 HOH HOH A . J 5 HOH 128 628 92 HOH HOH A . J 5 HOH 129 629 127 HOH HOH A . J 5 HOH 130 630 78 HOH HOH A . J 5 HOH 131 631 56 HOH HOH A . J 5 HOH 132 632 109 HOH HOH A . J 5 HOH 133 633 106 HOH HOH A . J 5 HOH 134 634 141 HOH HOH A . J 5 HOH 135 635 85 HOH HOH A . J 5 HOH 136 636 19 HOH HOH A . J 5 HOH 137 637 105 HOH HOH A . J 5 HOH 138 638 131 HOH HOH A . J 5 HOH 139 639 140 HOH HOH A . J 5 HOH 140 640 135 HOH HOH A . J 5 HOH 141 641 82 HOH HOH A . J 5 HOH 142 642 84 HOH HOH A . J 5 HOH 143 643 83 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1640 ? 1 MORE 18 ? 1 'SSA (A^2)' 14170 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-08-28 2 'Structure model' 1 1 2019-11-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.title' 5 2 'Structure model' '_citation_author.identifier_ORCID' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0189 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DIALS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 55 ? ? -175.36 137.08 2 1 GLU A 78 ? ? -119.51 -78.72 3 1 SER A 113 ? ? 101.03 157.10 4 1 ALA A 173 ? ? -142.80 58.49 5 1 THR A 237 ? ? -69.75 90.76 6 1 ASN A 331 ? ? -91.87 52.87 7 1 ASN A 331 ? ? -91.59 51.83 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 22 ? A SER 1 2 1 Y 1 A MET 23 ? A MET 2 3 1 Y 1 A ALA 24 ? A ALA 3 4 1 Y 1 A SER 25 ? A SER 4 5 1 Y 1 A GLN 26 ? A GLN 5 6 1 Y 1 A GLY 27 ? A GLY 6 7 1 Y 1 A GLY 28 ? A GLY 7 8 1 Y 1 A ASP 29 ? A ASP 8 9 1 Y 1 A SER 30 ? A SER 9 10 1 Y 1 A GLY 31 ? A GLY 10 11 1 Y 1 A ASN 32 ? A ASN 11 12 1 Y 1 A SER 33 ? A SER 12 13 1 Y 1 A LYS 34 ? A LYS 13 14 1 Y 1 A GLN 35 ? A GLN 14 15 1 Y 1 A GLU 36 ? A GLU 15 16 1 Y 1 A SER 37 ? A SER 16 17 1 Y 1 A ASN 38 ? A ASN 17 18 1 Y 1 A SER 39 ? A SER 18 19 1 Y 1 A LYS 40 ? A LYS 19 20 1 Y 1 A ASP 41 ? A ASP 20 21 1 Y 1 A LYS 42 ? A LYS 21 22 1 Y 1 A GLU 340 ? A GLU 319 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 'TRIETHYLENE GLYCOL' PGE 4 'DI(HYDROXYETHYL)ETHER' PEG 5 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #