data_6I25 # _entry.id 6I25 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6I25 pdb_00006i25 10.2210/pdb6i25/pdb WWPDB D_1200011512 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-06-19 2 'Structure model' 1 1 2019-08-21 3 'Structure model' 1 2 2024-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' diffrn_source 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' pdbx_initial_refinement_model 6 3 'Structure model' pdbx_struct_conn_angle 7 3 'Structure model' struct_conn 8 3 'Structure model' struct_conn_type # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 2 3 'Structure model' '_database_2.pdbx_DOI' 3 3 'Structure model' '_database_2.pdbx_database_accession' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.value' 15 3 'Structure model' '_struct_conn.conn_type_id' 16 3 'Structure model' '_struct_conn.id' 17 3 'Structure model' '_struct_conn.pdbx_dist_value' 18 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 19 3 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 20 3 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 21 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 22 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 24 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 25 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 26 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 27 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 28 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 29 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 30 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 31 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 32 3 'Structure model' '_struct_conn.ptnr2_symmetry' 33 3 'Structure model' '_struct_conn_type.id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6I25 _pdbx_database_status.recvd_initial_deposition_date 2018-10-31 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Rizkallah, P.J.' 1 ? 'Kalvaitis, M.E.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biochemistry _citation.journal_id_ASTM BICHAW _citation.journal_id_CSD 0033 _citation.journal_id_ISSN 0006-2960 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 58 _citation.language ? _citation.page_first 2608 _citation.page_last 2616 _citation.title 'A Noncanonical Chromophore Reveals Structural Rearrangements of the Light-Oxygen-Voltage Domain upon Photoactivation.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.biochem.9b00255 _citation.pdbx_database_id_PubMed 31082213 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kalvaitis, M.E.' 1 0000-0002-8175-7552 primary 'Johnson, L.A.' 2 0000-0002-6697-6589 primary 'Mart, R.J.' 3 0000-0003-2196-5840 primary 'Rizkallah, P.' 4 0000-0002-9290-0369 primary 'Allemann, R.K.' 5 0000-0002-1323-8830 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Aureochrome1-like protein' 15012.846 1 ? ? ? ? 2 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn ;[(2~{R},3~{S},4~{S})-5-[(4~{a}~{R})-7,8-dimethyl-2,4-bis(oxidanylidene)-4~{a},5-dihydropyrimido[4,5-b]quinolin-10-yl]-2,3,4-tris(oxidanyl)pentyl] dihydrogen phosphate ; 457.372 1 ? ? ? ? 5 non-polymer syn '1-deoxy-1-(7,8-dimethyl-2,4-dioxo-3,4-dihydropyrimido[4,5-b]quinolin-10(2H)-yl)-5-O-phosphono-D-ribitol' 455.356 1 ? ? ? ? 6 water nat water 18.015 151 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GAMDYSLVKALQTAQQNFVISDPSIPDNPIVYASQGFLTLTGYALSEVLGRNCRFLQGPETDPKAVEKVRKGLERGEDTT VVLLNYRKDGSTFWNQLFIAALRDGEGNVVNYLGVQCKVSEDYAKAFLKNEENEK ; _entity_poly.pdbx_seq_one_letter_code_can ;GAMDYSLVKALQTAQQNFVISDPSIPDNPIVYASQGFLTLTGYALSEVLGRNCRFLQGPETDPKAVEKVRKGLERGEDTT VVLLNYRKDGSTFWNQLFIAALRDGEGNVVNYLGVQCKVSEDYAKAFLKNEENEK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 'MAGNESIUM ION' MG 4 ;[(2~{R},3~{S},4~{S})-5-[(4~{a}~{R})-7,8-dimethyl-2,4-bis(oxidanylidene)-4~{a},5-dihydropyrimido[4,5-b]quinolin-10-yl]-2,3,4-tris(oxidanyl)pentyl] dihydrogen phosphate ; 5DD 5 '1-deoxy-1-(7,8-dimethyl-2,4-dioxo-3,4-dihydropyrimido[4,5-b]quinolin-10(2H)-yl)-5-O-phosphono-D-ribitol' 9O9 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 ASP n 1 5 TYR n 1 6 SER n 1 7 LEU n 1 8 VAL n 1 9 LYS n 1 10 ALA n 1 11 LEU n 1 12 GLN n 1 13 THR n 1 14 ALA n 1 15 GLN n 1 16 GLN n 1 17 ASN n 1 18 PHE n 1 19 VAL n 1 20 ILE n 1 21 SER n 1 22 ASP n 1 23 PRO n 1 24 SER n 1 25 ILE n 1 26 PRO n 1 27 ASP n 1 28 ASN n 1 29 PRO n 1 30 ILE n 1 31 VAL n 1 32 TYR n 1 33 ALA n 1 34 SER n 1 35 GLN n 1 36 GLY n 1 37 PHE n 1 38 LEU n 1 39 THR n 1 40 LEU n 1 41 THR n 1 42 GLY n 1 43 TYR n 1 44 ALA n 1 45 LEU n 1 46 SER n 1 47 GLU n 1 48 VAL n 1 49 LEU n 1 50 GLY n 1 51 ARG n 1 52 ASN n 1 53 CYS n 1 54 ARG n 1 55 PHE n 1 56 LEU n 1 57 GLN n 1 58 GLY n 1 59 PRO n 1 60 GLU n 1 61 THR n 1 62 ASP n 1 63 PRO n 1 64 LYS n 1 65 ALA n 1 66 VAL n 1 67 GLU n 1 68 LYS n 1 69 VAL n 1 70 ARG n 1 71 LYS n 1 72 GLY n 1 73 LEU n 1 74 GLU n 1 75 ARG n 1 76 GLY n 1 77 GLU n 1 78 ASP n 1 79 THR n 1 80 THR n 1 81 VAL n 1 82 VAL n 1 83 LEU n 1 84 LEU n 1 85 ASN n 1 86 TYR n 1 87 ARG n 1 88 LYS n 1 89 ASP n 1 90 GLY n 1 91 SER n 1 92 THR n 1 93 PHE n 1 94 TRP n 1 95 ASN n 1 96 GLN n 1 97 LEU n 1 98 PHE n 1 99 ILE n 1 100 ALA n 1 101 ALA n 1 102 LEU n 1 103 ARG n 1 104 ASP n 1 105 GLY n 1 106 GLU n 1 107 GLY n 1 108 ASN n 1 109 VAL n 1 110 VAL n 1 111 ASN n 1 112 TYR n 1 113 LEU n 1 114 GLY n 1 115 VAL n 1 116 GLN n 1 117 CYS n 1 118 LYS n 1 119 VAL n 1 120 SER n 1 121 GLU n 1 122 ASP n 1 123 TYR n 1 124 ALA n 1 125 LYS n 1 126 ALA n 1 127 PHE n 1 128 LEU n 1 129 LYS n 1 130 ASN n 1 131 GLU n 1 132 GLU n 1 133 ASN n 1 134 GLU n 1 135 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 135 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene OdAUREO1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Ochromonas danica' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2986 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5DD non-polymer . ;[(2~{R},3~{S},4~{S})-5-[(4~{a}~{R})-7,8-dimethyl-2,4-bis(oxidanylidene)-4~{a},5-dihydropyrimido[4,5-b]quinolin-10-yl]-2,3,4-tris(oxidanyl)pentyl] dihydrogen phosphate ; ? 'C18 H24 N3 O9 P' 457.372 9O9 non-polymer . '1-deoxy-1-(7,8-dimethyl-2,4-dioxo-3,4-dihydropyrimido[4,5-b]quinolin-10(2H)-yl)-5-O-phosphono-D-ribitol' ? 'C18 H22 N3 O9 P' 455.356 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 178 178 GLY GLY A . n A 1 2 ALA 2 179 179 ALA ALA A . n A 1 3 MET 3 180 180 MET MET A . n A 1 4 ASP 4 181 181 ASP ASP A . n A 1 5 TYR 5 182 182 TYR TYR A . n A 1 6 SER 6 183 183 SER SER A . n A 1 7 LEU 7 184 184 LEU LEU A . n A 1 8 VAL 8 185 185 VAL VAL A . n A 1 9 LYS 9 186 186 LYS LYS A . n A 1 10 ALA 10 187 187 ALA ALA A . n A 1 11 LEU 11 188 188 LEU LEU A . n A 1 12 GLN 12 189 189 GLN GLN A . n A 1 13 THR 13 190 190 THR THR A . n A 1 14 ALA 14 191 191 ALA ALA A . n A 1 15 GLN 15 192 192 GLN GLN A . n A 1 16 GLN 16 193 193 GLN GLN A . n A 1 17 ASN 17 194 194 ASN ASN A . n A 1 18 PHE 18 195 195 PHE PHE A . n A 1 19 VAL 19 196 196 VAL VAL A . n A 1 20 ILE 20 197 197 ILE ILE A . n A 1 21 SER 21 198 198 SER SER A . n A 1 22 ASP 22 199 199 ASP ASP A . n A 1 23 PRO 23 200 200 PRO PRO A . n A 1 24 SER 24 201 201 SER SER A . n A 1 25 ILE 25 202 202 ILE ILE A . n A 1 26 PRO 26 203 203 PRO PRO A . n A 1 27 ASP 27 204 204 ASP ASP A . n A 1 28 ASN 28 205 205 ASN ASN A . n A 1 29 PRO 29 206 206 PRO PRO A . n A 1 30 ILE 30 207 207 ILE ILE A . n A 1 31 VAL 31 208 208 VAL VAL A . n A 1 32 TYR 32 209 209 TYR TYR A . n A 1 33 ALA 33 210 210 ALA ALA A . n A 1 34 SER 34 211 211 SER SER A . n A 1 35 GLN 35 212 212 GLN GLN A . n A 1 36 GLY 36 213 213 GLY GLY A . n A 1 37 PHE 37 214 214 PHE PHE A . n A 1 38 LEU 38 215 215 LEU LEU A . n A 1 39 THR 39 216 216 THR THR A . n A 1 40 LEU 40 217 217 LEU LEU A . n A 1 41 THR 41 218 218 THR THR A . n A 1 42 GLY 42 219 219 GLY GLY A . n A 1 43 TYR 43 220 220 TYR TYR A . n A 1 44 ALA 44 221 221 ALA ALA A . n A 1 45 LEU 45 222 222 LEU LEU A . n A 1 46 SER 46 223 223 SER SER A . n A 1 47 GLU 47 224 224 GLU GLU A . n A 1 48 VAL 48 225 225 VAL VAL A . n A 1 49 LEU 49 226 226 LEU LEU A . n A 1 50 GLY 50 227 227 GLY GLY A . n A 1 51 ARG 51 228 228 ARG ARG A . n A 1 52 ASN 52 229 229 ASN ASN A . n A 1 53 CYS 53 230 230 CYS CYS A . n A 1 54 ARG 54 231 231 ARG ARG A . n A 1 55 PHE 55 232 232 PHE PHE A . n A 1 56 LEU 56 233 233 LEU LEU A . n A 1 57 GLN 57 234 234 GLN GLN A . n A 1 58 GLY 58 235 235 GLY GLY A . n A 1 59 PRO 59 236 236 PRO PRO A . n A 1 60 GLU 60 237 237 GLU GLU A . n A 1 61 THR 61 238 238 THR THR A . n A 1 62 ASP 62 239 239 ASP ASP A . n A 1 63 PRO 63 240 240 PRO PRO A . n A 1 64 LYS 64 241 241 LYS LYS A . n A 1 65 ALA 65 242 242 ALA ALA A . n A 1 66 VAL 66 243 243 VAL VAL A . n A 1 67 GLU 67 244 244 GLU GLU A . n A 1 68 LYS 68 245 245 LYS LYS A . n A 1 69 VAL 69 246 246 VAL VAL A . n A 1 70 ARG 70 247 247 ARG ARG A . n A 1 71 LYS 71 248 248 LYS LYS A . n A 1 72 GLY 72 249 249 GLY GLY A . n A 1 73 LEU 73 250 250 LEU LEU A . n A 1 74 GLU 74 251 251 GLU GLU A . n A 1 75 ARG 75 252 252 ARG ARG A . n A 1 76 GLY 76 253 253 GLY GLY A . n A 1 77 GLU 77 254 254 GLU GLU A . n A 1 78 ASP 78 255 255 ASP ASP A . n A 1 79 THR 79 256 256 THR THR A . n A 1 80 THR 80 257 257 THR THR A . n A 1 81 VAL 81 258 258 VAL VAL A . n A 1 82 VAL 82 259 259 VAL VAL A . n A 1 83 LEU 83 260 260 LEU LEU A . n A 1 84 LEU 84 261 261 LEU LEU A . n A 1 85 ASN 85 262 262 ASN ASN A . n A 1 86 TYR 86 263 263 TYR TYR A . n A 1 87 ARG 87 264 264 ARG ARG A . n A 1 88 LYS 88 265 265 LYS LYS A . n A 1 89 ASP 89 266 266 ASP ASP A . n A 1 90 GLY 90 267 267 GLY GLY A . n A 1 91 SER 91 268 268 SER SER A . n A 1 92 THR 92 269 269 THR THR A . n A 1 93 PHE 93 270 270 PHE PHE A . n A 1 94 TRP 94 271 271 TRP TRP A . n A 1 95 ASN 95 272 272 ASN ASN A . n A 1 96 GLN 96 273 273 GLN GLN A . n A 1 97 LEU 97 274 274 LEU LEU A . n A 1 98 PHE 98 275 275 PHE PHE A . n A 1 99 ILE 99 276 276 ILE ILE A . n A 1 100 ALA 100 277 277 ALA ALA A . n A 1 101 ALA 101 278 278 ALA ALA A . n A 1 102 LEU 102 279 279 LEU LEU A . n A 1 103 ARG 103 280 280 ARG ARG A . n A 1 104 ASP 104 281 281 ASP ASP A . n A 1 105 GLY 105 282 282 GLY GLY A . n A 1 106 GLU 106 283 283 GLU GLU A . n A 1 107 GLY 107 284 284 GLY GLY A . n A 1 108 ASN 108 285 285 ASN ASN A . n A 1 109 VAL 109 286 286 VAL VAL A . n A 1 110 VAL 110 287 287 VAL VAL A . n A 1 111 ASN 111 288 288 ASN ASN A . n A 1 112 TYR 112 289 289 TYR TYR A . n A 1 113 LEU 113 290 290 LEU LEU A . n A 1 114 GLY 114 291 291 GLY GLY A . n A 1 115 VAL 115 292 292 VAL VAL A . n A 1 116 GLN 116 293 293 GLN GLN A . n A 1 117 CYS 117 294 294 CYS CYS A . n A 1 118 LYS 118 295 295 LYS LYS A . n A 1 119 VAL 119 296 296 VAL VAL A . n A 1 120 SER 120 297 297 SER SER A . n A 1 121 GLU 121 298 298 GLU GLU A . n A 1 122 ASP 122 299 299 ASP ASP A . n A 1 123 TYR 123 300 300 TYR TYR A . n A 1 124 ALA 124 301 301 ALA ALA A . n A 1 125 LYS 125 302 302 LYS LYS A . n A 1 126 ALA 126 303 303 ALA ALA A . n A 1 127 PHE 127 304 304 PHE PHE A . n A 1 128 LEU 128 305 305 LEU LEU A . n A 1 129 LYS 129 306 306 LYS LYS A . n A 1 130 ASN 130 307 307 ASN ASN A . n A 1 131 GLU 131 308 308 GLU GLU A . n A 1 132 GLU 132 309 309 GLU GLU A . n A 1 133 ASN 133 310 310 ASN ASN A . n A 1 134 GLU 134 311 311 GLU GLU A . n A 1 135 LYS 135 312 312 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 401 354 CL CL A . C 3 MG 1 402 358 MG MG A . D 4 5DD 1 403 361 5DD 5DD A . E 5 9O9 1 404 365 9O9 5DF A . F 6 HOH 1 501 515 HOH HOH A . F 6 HOH 2 502 438 HOH HOH A . F 6 HOH 3 503 447 HOH HOH A . F 6 HOH 4 504 419 HOH HOH A . F 6 HOH 5 505 458 HOH HOH A . F 6 HOH 6 506 476 HOH HOH A . F 6 HOH 7 507 544 HOH HOH A . F 6 HOH 8 508 473 HOH HOH A . F 6 HOH 9 509 404 HOH HOH A . F 6 HOH 10 510 453 HOH HOH A . F 6 HOH 11 511 407 HOH HOH A . F 6 HOH 12 512 434 HOH HOH A . F 6 HOH 13 513 412 HOH HOH A . F 6 HOH 14 514 449 HOH HOH A . F 6 HOH 15 515 457 HOH HOH A . F 6 HOH 16 516 432 HOH HOH A . F 6 HOH 17 517 547 HOH HOH A . F 6 HOH 18 518 491 HOH HOH A . F 6 HOH 19 519 527 HOH HOH A . F 6 HOH 20 520 456 HOH HOH A . F 6 HOH 21 521 531 HOH HOH A . F 6 HOH 22 522 462 HOH HOH A . F 6 HOH 23 523 425 HOH HOH A . F 6 HOH 24 524 439 HOH HOH A . F 6 HOH 25 525 431 HOH HOH A . F 6 HOH 26 526 465 HOH HOH A . F 6 HOH 27 527 423 HOH HOH A . F 6 HOH 28 528 450 HOH HOH A . F 6 HOH 29 529 495 HOH HOH A . F 6 HOH 30 530 435 HOH HOH A . F 6 HOH 31 531 548 HOH HOH A . F 6 HOH 32 532 414 HOH HOH A . F 6 HOH 33 533 463 HOH HOH A . F 6 HOH 34 534 489 HOH HOH A . F 6 HOH 35 535 409 HOH HOH A . F 6 HOH 36 536 496 HOH HOH A . F 6 HOH 37 537 459 HOH HOH A . F 6 HOH 38 538 436 HOH HOH A . F 6 HOH 39 539 403 HOH HOH A . F 6 HOH 40 540 445 HOH HOH A . F 6 HOH 41 541 430 HOH HOH A . F 6 HOH 42 542 535 HOH HOH A . F 6 HOH 43 543 510 HOH HOH A . F 6 HOH 44 544 442 HOH HOH A . F 6 HOH 45 545 418 HOH HOH A . F 6 HOH 46 546 498 HOH HOH A . F 6 HOH 47 547 429 HOH HOH A . F 6 HOH 48 548 461 HOH HOH A . F 6 HOH 49 549 413 HOH HOH A . F 6 HOH 50 550 446 HOH HOH A . F 6 HOH 51 551 444 HOH HOH A . F 6 HOH 52 552 477 HOH HOH A . F 6 HOH 53 553 485 HOH HOH A . F 6 HOH 54 554 538 HOH HOH A . F 6 HOH 55 555 487 HOH HOH A . F 6 HOH 56 556 484 HOH HOH A . F 6 HOH 57 557 428 HOH HOH A . F 6 HOH 58 558 468 HOH HOH A . F 6 HOH 59 559 405 HOH HOH A . F 6 HOH 60 560 452 HOH HOH A . F 6 HOH 61 561 437 HOH HOH A . F 6 HOH 62 562 426 HOH HOH A . F 6 HOH 63 563 533 HOH HOH A . F 6 HOH 64 564 528 HOH HOH A . F 6 HOH 65 565 480 HOH HOH A . F 6 HOH 66 566 472 HOH HOH A . F 6 HOH 67 567 464 HOH HOH A . F 6 HOH 68 568 427 HOH HOH A . F 6 HOH 69 569 540 HOH HOH A . F 6 HOH 70 570 420 HOH HOH A . F 6 HOH 71 571 441 HOH HOH A . F 6 HOH 72 572 415 HOH HOH A . F 6 HOH 73 573 406 HOH HOH A . F 6 HOH 74 574 536 HOH HOH A . F 6 HOH 75 575 424 HOH HOH A . F 6 HOH 76 576 408 HOH HOH A . F 6 HOH 77 577 475 HOH HOH A . F 6 HOH 78 578 433 HOH HOH A . F 6 HOH 79 579 455 HOH HOH A . F 6 HOH 80 580 537 HOH HOH A . F 6 HOH 81 581 482 HOH HOH A . F 6 HOH 82 582 479 HOH HOH A . F 6 HOH 83 583 451 HOH HOH A . F 6 HOH 84 584 509 HOH HOH A . F 6 HOH 85 585 471 HOH HOH A . F 6 HOH 86 586 402 HOH HOH A . F 6 HOH 87 587 519 HOH HOH A . F 6 HOH 88 588 546 HOH HOH A . F 6 HOH 89 589 526 HOH HOH A . F 6 HOH 90 590 532 HOH HOH A . F 6 HOH 91 591 488 HOH HOH A . F 6 HOH 92 592 530 HOH HOH A . F 6 HOH 93 593 514 HOH HOH A . F 6 HOH 94 594 503 HOH HOH A . F 6 HOH 95 595 460 HOH HOH A . F 6 HOH 96 596 469 HOH HOH A . F 6 HOH 97 597 421 HOH HOH A . F 6 HOH 98 598 416 HOH HOH A . F 6 HOH 99 599 529 HOH HOH A . F 6 HOH 100 600 448 HOH HOH A . F 6 HOH 101 601 467 HOH HOH A . F 6 HOH 102 602 511 HOH HOH A . F 6 HOH 103 603 513 HOH HOH A . F 6 HOH 104 604 494 HOH HOH A . F 6 HOH 105 605 411 HOH HOH A . F 6 HOH 106 606 534 HOH HOH A . F 6 HOH 107 607 422 HOH HOH A . F 6 HOH 108 608 443 HOH HOH A . F 6 HOH 109 609 466 HOH HOH A . F 6 HOH 110 610 499 HOH HOH A . F 6 HOH 111 611 541 HOH HOH A . F 6 HOH 112 612 490 HOH HOH A . F 6 HOH 113 613 523 HOH HOH A . F 6 HOH 114 614 524 HOH HOH A . F 6 HOH 115 615 507 HOH HOH A . F 6 HOH 116 616 470 HOH HOH A . F 6 HOH 117 617 481 HOH HOH A . F 6 HOH 118 618 551 HOH HOH A . F 6 HOH 119 619 410 HOH HOH A . F 6 HOH 120 620 497 HOH HOH A . F 6 HOH 121 621 401 HOH HOH A . F 6 HOH 122 622 517 HOH HOH A . F 6 HOH 123 623 500 HOH HOH A . F 6 HOH 124 624 417 HOH HOH A . F 6 HOH 125 625 542 HOH HOH A . F 6 HOH 126 626 520 HOH HOH A . F 6 HOH 127 627 493 HOH HOH A . F 6 HOH 128 628 549 HOH HOH A . F 6 HOH 129 629 518 HOH HOH A . F 6 HOH 130 630 505 HOH HOH A . F 6 HOH 131 631 550 HOH HOH A . F 6 HOH 132 632 486 HOH HOH A . F 6 HOH 133 633 504 HOH HOH A . F 6 HOH 134 634 492 HOH HOH A . F 6 HOH 135 635 502 HOH HOH A . F 6 HOH 136 636 521 HOH HOH A . F 6 HOH 137 637 543 HOH HOH A . F 6 HOH 138 638 539 HOH HOH A . F 6 HOH 139 639 501 HOH HOH A . F 6 HOH 140 640 522 HOH HOH A . F 6 HOH 141 641 474 HOH HOH A . F 6 HOH 142 642 440 HOH HOH A . F 6 HOH 143 643 483 HOH HOH A . F 6 HOH 144 644 545 HOH HOH A . F 6 HOH 145 645 525 HOH HOH A . F 6 HOH 146 646 478 HOH HOH A . F 6 HOH 147 647 512 HOH HOH A . F 6 HOH 148 648 506 HOH HOH A . F 6 HOH 149 649 508 HOH HOH A . F 6 HOH 150 650 454 HOH HOH A . F 6 HOH 151 651 516 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0189 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 6I25 _cell.details ? _cell.formula_units_Z ? _cell.length_a 106.287 _cell.length_a_esd ? _cell.length_b 106.287 _cell.length_b_esd ? _cell.length_c 67.859 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6I25 _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6I25 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.69 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 66.62 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;1.5-3 M Na malonate, 0.1 M Tris.acetate ; _exptl_crystal_grow.pdbx_pH_range '7.5 - 8.0' # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-05-12 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9795 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate 17.5 _reflns.entry_id 6I25 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.97 _reflns.d_resolution_low 54.62 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 16503 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 20.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.97 _reflns_shell.d_res_low 2.02 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.07 _refine.aniso_B[1][2] -0.04 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] -0.07 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 0.24 _refine.B_iso_max ? _refine.B_iso_mean 23.889 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.960 _refine.correlation_coeff_Fo_to_Fc_free 0.928 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6I25 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.97 _refine.ls_d_res_low 54.62 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 15792 _refine.ls_number_reflns_R_free 674 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.91 _refine.ls_percent_reflns_R_free 4.1 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.17901 _refine.ls_R_factor_R_free 0.22230 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.17692 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5A8B _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.203 _refine.pdbx_overall_ESU_R_Free 0.128 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 10.291 _refine.overall_SU_ML 0.119 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 1057 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 64 _refine_hist.number_atoms_solvent 151 _refine_hist.number_atoms_total 1272 _refine_hist.d_res_high 1.97 _refine_hist.d_res_low 54.62 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.014 0.020 1187 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 1065 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.697 2.035 1632 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.029 3.001 2486 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.409 5.000 147 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 36.397 25.536 56 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 16.659 15.000 195 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 13.279 15.000 6 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.116 0.200 177 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 0.020 1330 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 229 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 1.418 1.382 559 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.412 1.382 558 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 1.882 2.068 703 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 1.884 2.069 704 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 1.580 1.613 626 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 1.580 1.613 627 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 2.032 2.373 925 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 3.510 17.575 1478 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 3.510 17.572 1479 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? 1.765 3.000 2248 ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? 28.691 5.000 85 ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? 6.675 5.000 2291 ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.970 _refine_ls_shell.d_res_low 2.021 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 0 _refine_ls_shell.number_reflns_R_work 1177 _refine_ls_shell.percent_reflns_obs 99.83 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.254 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6I25 _struct.title 'Flavin Analogue Sheds Light on Light-Oxygen-Voltage Domain Mechanism' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6I25 _struct_keywords.text 'LOV Domain, FMN, Dark grown, fluorescence, light sensing, transcription factor PAS domain, Ochronomas danica, transcription' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code C5NSW6_OCHDN _struct_ref.pdbx_db_accession C5NSW6 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DYSLVKALQTAQQNFVISDPSIPDNPIVYASQGFLTLTGYALSEVLGRNCRFLQGPETDPKAVEKVRKGLERGEDTTVVL LNYRKDGSTFWNQLFIAALRDGEGNVVNYLGVQCKVSEDYAKAFLKNEENEK ; _struct_ref.pdbx_align_begin 181 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6I25 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 135 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession C5NSW6 _struct_ref_seq.db_align_beg 181 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 312 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 181 _struct_ref_seq.pdbx_auth_seq_align_end 312 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6I25 GLY A 1 ? UNP C5NSW6 ? ? 'expression tag' 178 1 1 6I25 ALA A 2 ? UNP C5NSW6 ? ? 'expression tag' 179 2 1 6I25 MET A 3 ? UNP C5NSW6 ? ? 'expression tag' 180 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 220 ? 1 MORE -17 ? 1 'SSA (A^2)' 7550 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support homology _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 1 ? ASP A 4 ? GLY A 178 ASP A 181 5 ? 4 HELX_P HELX_P2 AA2 TYR A 5 ? ALA A 14 ? TYR A 182 ALA A 191 1 ? 10 HELX_P HELX_P3 AA3 SER A 34 ? GLY A 42 ? SER A 211 GLY A 219 1 ? 9 HELX_P HELX_P4 AA4 ALA A 44 ? LEU A 49 ? ALA A 221 LEU A 226 1 ? 6 HELX_P HELX_P5 AA5 ASN A 52 ? GLN A 57 ? ASN A 229 GLN A 234 5 ? 6 HELX_P HELX_P6 AA6 ASP A 62 ? GLY A 76 ? ASP A 239 GLY A 253 1 ? 15 HELX_P HELX_P7 AA7 SER A 120 ? LYS A 135 ? SER A 297 LYS A 312 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale none ? A CYS 53 SG B ? ? 1_555 D 5DD . C4A B ? A CYS 230 A 5DD 403 1_555 ? ? ? ? ? ? ? 1.837 ? ? metalc1 metalc ? ? A SER 46 O ? ? ? 1_555 C MG . MG ? ? A SER 223 A MG 402 1_555 ? ? ? ? ? ? ? 2.264 ? ? metalc2 metalc ? ? A SER 46 O ? ? ? 1_555 C MG . MG ? ? A SER 223 A MG 402 12_565 ? ? ? ? ? ? ? 2.262 ? ? metalc3 metalc ? ? A LEU 49 O ? ? ? 1_555 C MG . MG ? ? A LEU 226 A MG 402 1_555 ? ? ? ? ? ? ? 2.243 ? ? metalc4 metalc ? ? A LEU 49 O ? ? ? 1_555 C MG . MG ? ? A LEU 226 A MG 402 12_565 ? ? ? ? ? ? ? 2.240 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 402 A HOH 511 1_555 ? ? ? ? ? ? ? 2.614 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 402 A HOH 511 12_565 ? ? ? ? ? ? ? 2.611 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A SER 46 ? A SER 223 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? A SER 46 ? A SER 223 ? 1_555 0.0 ? 2 O ? A SER 46 ? A SER 223 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? A LEU 49 ? A LEU 226 ? 1_555 96.6 ? 3 O ? A SER 46 ? A SER 223 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? A LEU 49 ? A LEU 226 ? 1_555 96.6 ? 4 O ? A SER 46 ? A SER 223 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? A LEU 49 ? A LEU 226 ? 1_555 96.6 ? 5 O ? A SER 46 ? A SER 223 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? A LEU 49 ? A LEU 226 ? 1_555 96.6 ? 6 O ? A LEU 49 ? A LEU 226 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? A LEU 49 ? A LEU 226 ? 1_555 0.0 ? 7 O ? A SER 46 ? A SER 223 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 511 ? 1_555 96.2 ? 8 O ? A SER 46 ? A SER 223 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 511 ? 1_555 96.2 ? 9 O ? A LEU 49 ? A LEU 226 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 511 ? 1_555 79.7 ? 10 O ? A LEU 49 ? A LEU 226 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 511 ? 1_555 79.7 ? 11 O ? A SER 46 ? A SER 223 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 511 ? 12_565 74.1 ? 12 O ? A SER 46 ? A SER 223 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 511 ? 12_565 74.1 ? 13 O ? A LEU 49 ? A LEU 226 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 511 ? 12_565 168.7 ? 14 O ? A LEU 49 ? A LEU 226 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 511 ? 12_565 168.7 ? 15 O ? F HOH . ? A HOH 511 ? 1_555 MG ? C MG . ? A MG 402 ? 1_555 O ? F HOH . ? A HOH 511 ? 12_565 107.3 ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 30 ? ALA A 33 ? ILE A 207 ALA A 210 AA1 2 ASN A 17 ? SER A 21 ? ASN A 194 SER A 198 AA1 3 VAL A 109 ? VAL A 119 ? VAL A 286 VAL A 296 AA1 4 THR A 92 ? ARG A 103 ? THR A 269 ARG A 280 AA1 5 THR A 79 ? TYR A 86 ? THR A 256 TYR A 263 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O VAL A 31 ? O VAL A 208 N ILE A 20 ? N ILE A 197 AA1 2 3 N VAL A 19 ? N VAL A 196 O GLY A 114 ? O GLY A 291 AA1 3 4 O CYS A 117 ? O CYS A 294 N GLN A 96 ? N GLN A 273 AA1 4 5 O LEU A 97 ? O LEU A 274 N VAL A 81 ? N VAL A 258 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CL 401 ? 5 'binding site for residue CL A 401' AC2 Software A MG 402 ? 6 'binding site for residue MG A 402' AC3 Software A 5DD 403 ? 24 'binding site for residue 5DD A 403' AC4 Software A 9O9 404 ? 25 'binding site for residue 9O9 A 404' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASN A 28 ? ASN A 205 . ? 1_555 ? 2 AC1 5 ASN A 52 ? ASN A 229 . ? 1_555 ? 3 AC1 5 5DD D . ? 5DD A 403 . ? 1_555 ? 4 AC1 5 9O9 E . ? 9O9 A 404 . ? 1_555 ? 5 AC1 5 HOH F . ? HOH A 543 . ? 1_555 ? 6 AC2 6 SER A 46 ? SER A 223 . ? 1_555 ? 7 AC2 6 SER A 46 ? SER A 223 . ? 12_565 ? 8 AC2 6 LEU A 49 ? LEU A 226 . ? 1_555 ? 9 AC2 6 LEU A 49 ? LEU A 226 . ? 12_565 ? 10 AC2 6 HOH F . ? HOH A 511 . ? 12_565 ? 11 AC2 6 HOH F . ? HOH A 511 . ? 1_555 ? 12 AC3 24 VAL A 19 ? VAL A 196 . ? 1_555 ? 13 AC3 24 SER A 21 ? SER A 198 . ? 1_555 ? 14 AC3 24 ASN A 28 ? ASN A 205 . ? 1_555 ? 15 AC3 24 PHE A 37 ? PHE A 214 . ? 1_555 ? 16 AC3 24 ASN A 52 ? ASN A 229 . ? 1_555 ? 17 AC3 24 CYS A 53 ? CYS A 230 . ? 1_555 ? 18 AC3 24 ARG A 54 ? ARG A 231 . ? 1_555 ? 19 AC3 24 LEU A 56 ? LEU A 233 . ? 1_555 ? 20 AC3 24 GLN A 57 ? GLN A 234 . ? 1_555 ? 21 AC3 24 VAL A 66 ? VAL A 243 . ? 1_555 ? 22 AC3 24 VAL A 69 ? VAL A 246 . ? 1_555 ? 23 AC3 24 LEU A 73 ? LEU A 250 . ? 1_555 ? 24 AC3 24 ASN A 85 ? ASN A 262 . ? 1_555 ? 25 AC3 24 ASN A 95 ? ASN A 272 . ? 1_555 ? 26 AC3 24 LEU A 97 ? LEU A 274 . ? 1_555 ? 27 AC3 24 GLY A 114 ? GLY A 291 . ? 1_555 ? 28 AC3 24 GLN A 116 ? GLN A 293 . ? 1_555 ? 29 AC3 24 CL B . ? CL A 401 . ? 1_555 ? 30 AC3 24 9O9 E . ? 9O9 A 404 . ? 1_555 ? 31 AC3 24 HOH F . ? HOH A 502 . ? 1_555 ? 32 AC3 24 HOH F . ? HOH A 525 . ? 1_555 ? 33 AC3 24 HOH F . ? HOH A 543 . ? 1_555 ? 34 AC3 24 HOH F . ? HOH A 559 . ? 1_555 ? 35 AC3 24 HOH F . ? HOH A 593 . ? 4_565 ? 36 AC4 25 VAL A 19 ? VAL A 196 . ? 1_555 ? 37 AC4 25 SER A 21 ? SER A 198 . ? 1_555 ? 38 AC4 25 ASN A 28 ? ASN A 205 . ? 1_555 ? 39 AC4 25 ASN A 52 ? ASN A 229 . ? 1_555 ? 40 AC4 25 CYS A 53 ? CYS A 230 . ? 1_555 ? 41 AC4 25 ARG A 54 ? ARG A 231 . ? 1_555 ? 42 AC4 25 GLN A 57 ? GLN A 234 . ? 1_555 ? 43 AC4 25 VAL A 66 ? VAL A 243 . ? 1_555 ? 44 AC4 25 ARG A 70 ? ARG A 247 . ? 1_555 ? 45 AC4 25 LEU A 73 ? LEU A 250 . ? 1_555 ? 46 AC4 25 LEU A 83 ? LEU A 260 . ? 1_555 ? 47 AC4 25 ASN A 85 ? ASN A 262 . ? 1_555 ? 48 AC4 25 ASN A 95 ? ASN A 272 . ? 1_555 ? 49 AC4 25 LEU A 97 ? LEU A 274 . ? 1_555 ? 50 AC4 25 ILE A 99 ? ILE A 276 . ? 1_555 ? 51 AC4 25 TYR A 112 ? TYR A 289 . ? 1_555 ? 52 AC4 25 GLY A 114 ? GLY A 291 . ? 1_555 ? 53 AC4 25 GLN A 116 ? GLN A 293 . ? 1_555 ? 54 AC4 25 CL B . ? CL A 401 . ? 1_555 ? 55 AC4 25 5DD D . ? 5DD A 403 . ? 1_555 ? 56 AC4 25 HOH F . ? HOH A 502 . ? 1_555 ? 57 AC4 25 HOH F . ? HOH A 525 . ? 1_555 ? 58 AC4 25 HOH F . ? HOH A 543 . ? 1_555 ? 59 AC4 25 HOH F . ? HOH A 559 . ? 1_555 ? 60 AC4 25 HOH F . ? HOH A 593 . ? 4_565 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 589 ? ? O A HOH 618 ? ? 2.00 2 1 NH2 A ARG 247 ? ? OE1 A GLU 251 ? ? 2.10 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 621 ? ? 1_555 O A HOH 621 ? ? 12_565 1.16 2 1 O A HOH 631 ? ? 1_555 O A HOH 631 ? ? 12_564 1.20 3 1 O A HOH 587 ? ? 1_555 O A HOH 587 ? ? 4_565 1.94 4 1 NE2 A GLN 193 ? ? 1_555 NE2 A GLN 193 ? ? 10_555 2.02 5 1 O A HOH 550 ? ? 1_555 O A HOH 619 ? ? 11_455 2.06 6 1 O A HOH 563 ? ? 1_555 O A HOH 615 ? ? 4_565 2.11 7 1 O A HOH 593 ? ? 1_555 O A HOH 615 ? ? 4_565 2.11 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id MG _pdbx_struct_special_symmetry.auth_seq_id 402 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id MG _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -34.6368 _pdbx_refine_tls.origin_y 34.5412 _pdbx_refine_tls.origin_z 7.9457 _pdbx_refine_tls.T[1][1] 0.0491 _pdbx_refine_tls.T[2][2] 0.0563 _pdbx_refine_tls.T[3][3] 0.0093 _pdbx_refine_tls.T[1][2] 0.0034 _pdbx_refine_tls.T[1][3] -0.0107 _pdbx_refine_tls.T[2][3] -0.0173 _pdbx_refine_tls.L[1][1] 1.9291 _pdbx_refine_tls.L[2][2] 2.1116 _pdbx_refine_tls.L[3][3] 1.5811 _pdbx_refine_tls.L[1][2] 0.8559 _pdbx_refine_tls.L[1][3] -0.8806 _pdbx_refine_tls.L[2][3] 0.0369 _pdbx_refine_tls.S[1][1] -0.0474 _pdbx_refine_tls.S[1][2] 0.1979 _pdbx_refine_tls.S[1][3] -0.0962 _pdbx_refine_tls.S[2][1] -0.2249 _pdbx_refine_tls.S[2][2] 0.0280 _pdbx_refine_tls.S[2][3] 0.0273 _pdbx_refine_tls.S[3][1] 0.1085 _pdbx_refine_tls.S[3][2] 0.0007 _pdbx_refine_tls.S[3][3] 0.0194 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 178 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 312 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5DD O3P O N N 1 5DD P P N N 2 5DD O1P O N N 3 5DD O2P O N N 4 5DD "O5'" O N N 5 5DD "C5'" C N N 6 5DD "C4'" C N R 7 5DD "O4'" O N N 8 5DD "C3'" C N S 9 5DD "O3'" O N N 10 5DD "C2'" C N S 11 5DD "O2'" O N N 12 5DD "C1'" C N N 13 5DD N10 N N N 14 5DD C9A C Y N 15 5DD C9 C Y N 16 5DD C8 C Y N 17 5DD C8M C N N 18 5DD C7 C Y N 19 5DD C7M C N N 20 5DD C6 C Y N 21 5DD C5A C Y N 22 5DD C10 C N N 23 5DD N1 N N N 24 5DD C4A C N R 25 5DD C4 C N N 26 5DD O4 O N N 27 5DD N3 N N N 28 5DD C2 C N N 29 5DD O2 O N N 30 5DD C1 C N N 31 5DD H1 H N N 32 5DD H2 H N N 33 5DD H3 H N N 34 5DD H4 H N N 35 5DD H5 H N N 36 5DD H6 H N N 37 5DD H7 H N N 38 5DD H8 H N N 39 5DD H9 H N N 40 5DD H10 H N N 41 5DD H11 H N N 42 5DD H12 H N N 43 5DD H13 H N N 44 5DD H14 H N N 45 5DD H15 H N N 46 5DD H16 H N N 47 5DD H17 H N N 48 5DD H18 H N N 49 5DD H19 H N N 50 5DD H20 H N N 51 5DD H21 H N N 52 5DD H22 H N N 53 5DD H23 H N N 54 5DD H24 H N N 55 9O9 C4 C N N 56 9O9 C5 C N N 57 9O9 C6 C N N 58 9O9 N1 N N N 59 9O9 N3 N N N 60 9O9 C2 C N N 61 9O9 CAA C Y N 62 9O9 CAB C Y N 63 9O9 CAC C Y N 64 9O9 CAD C Y N 65 9O9 CAE C Y N 66 9O9 CAF C Y N 67 9O9 CAJ C N N 68 9O9 CAO C N N 69 9O9 CAP C N N 70 9O9 CAS C N N 71 9O9 CAT C N S 72 9O9 CAU C N S 73 9O9 CAV C N R 74 9O9 CAW C N N 75 9O9 NAG N N N 76 9O9 O2 O N N 77 9O9 O4 O N N 78 9O9 OAX O N N 79 9O9 OAY O N N 80 9O9 OAZ O N N 81 9O9 OBA O N N 82 9O9 OBC O N N 83 9O9 OBD O N N 84 9O9 OBE O N N 85 9O9 PBB P N N 86 9O9 H2 H N N 87 9O9 H3 H N N 88 9O9 H4 H N N 89 9O9 H5 H N N 90 9O9 H6 H N N 91 9O9 H7 H N N 92 9O9 H8 H N N 93 9O9 H9 H N N 94 9O9 H10 H N N 95 9O9 H11 H N N 96 9O9 H12 H N N 97 9O9 H13 H N N 98 9O9 H14 H N N 99 9O9 H15 H N N 100 9O9 H16 H N N 101 9O9 H17 H N N 102 9O9 H18 H N N 103 9O9 H19 H N N 104 9O9 H20 H N N 105 9O9 H21 H N N 106 9O9 H22 H N N 107 9O9 H23 H N N 108 ALA N N N N 109 ALA CA C N S 110 ALA C C N N 111 ALA O O N N 112 ALA CB C N N 113 ALA OXT O N N 114 ALA H H N N 115 ALA H2 H N N 116 ALA HA H N N 117 ALA HB1 H N N 118 ALA HB2 H N N 119 ALA HB3 H N N 120 ALA HXT H N N 121 ARG N N N N 122 ARG CA C N S 123 ARG C C N N 124 ARG O O N N 125 ARG CB C N N 126 ARG CG C N N 127 ARG CD C N N 128 ARG NE N N N 129 ARG CZ C N N 130 ARG NH1 N N N 131 ARG NH2 N N N 132 ARG OXT O N N 133 ARG H H N N 134 ARG H2 H N N 135 ARG HA H N N 136 ARG HB2 H N N 137 ARG HB3 H N N 138 ARG HG2 H N N 139 ARG HG3 H N N 140 ARG HD2 H N N 141 ARG HD3 H N N 142 ARG HE H N N 143 ARG HH11 H N N 144 ARG HH12 H N N 145 ARG HH21 H N N 146 ARG HH22 H N N 147 ARG HXT H N N 148 ASN N N N N 149 ASN CA C N S 150 ASN C C N N 151 ASN O O N N 152 ASN CB C N N 153 ASN CG C N N 154 ASN OD1 O N N 155 ASN ND2 N N N 156 ASN OXT O N N 157 ASN H H N N 158 ASN H2 H N N 159 ASN HA H N N 160 ASN HB2 H N N 161 ASN HB3 H N N 162 ASN HD21 H N N 163 ASN HD22 H N N 164 ASN HXT H N N 165 ASP N N N N 166 ASP CA C N S 167 ASP C C N N 168 ASP O O N N 169 ASP CB C N N 170 ASP CG C N N 171 ASP OD1 O N N 172 ASP OD2 O N N 173 ASP OXT O N N 174 ASP H H N N 175 ASP H2 H N N 176 ASP HA H N N 177 ASP HB2 H N N 178 ASP HB3 H N N 179 ASP HD2 H N N 180 ASP HXT H N N 181 CL CL CL N N 182 CYS N N N N 183 CYS CA C N R 184 CYS C C N N 185 CYS O O N N 186 CYS CB C N N 187 CYS SG S N N 188 CYS OXT O N N 189 CYS H H N N 190 CYS H2 H N N 191 CYS HA H N N 192 CYS HB2 H N N 193 CYS HB3 H N N 194 CYS HG H N N 195 CYS HXT H N N 196 GLN N N N N 197 GLN CA C N S 198 GLN C C N N 199 GLN O O N N 200 GLN CB C N N 201 GLN CG C N N 202 GLN CD C N N 203 GLN OE1 O N N 204 GLN NE2 N N N 205 GLN OXT O N N 206 GLN H H N N 207 GLN H2 H N N 208 GLN HA H N N 209 GLN HB2 H N N 210 GLN HB3 H N N 211 GLN HG2 H N N 212 GLN HG3 H N N 213 GLN HE21 H N N 214 GLN HE22 H N N 215 GLN HXT H N N 216 GLU N N N N 217 GLU CA C N S 218 GLU C C N N 219 GLU O O N N 220 GLU CB C N N 221 GLU CG C N N 222 GLU CD C N N 223 GLU OE1 O N N 224 GLU OE2 O N N 225 GLU OXT O N N 226 GLU H H N N 227 GLU H2 H N N 228 GLU HA H N N 229 GLU HB2 H N N 230 GLU HB3 H N N 231 GLU HG2 H N N 232 GLU HG3 H N N 233 GLU HE2 H N N 234 GLU HXT H N N 235 GLY N N N N 236 GLY CA C N N 237 GLY C C N N 238 GLY O O N N 239 GLY OXT O N N 240 GLY H H N N 241 GLY H2 H N N 242 GLY HA2 H N N 243 GLY HA3 H N N 244 GLY HXT H N N 245 HOH O O N N 246 HOH H1 H N N 247 HOH H2 H N N 248 ILE N N N N 249 ILE CA C N S 250 ILE C C N N 251 ILE O O N N 252 ILE CB C N S 253 ILE CG1 C N N 254 ILE CG2 C N N 255 ILE CD1 C N N 256 ILE OXT O N N 257 ILE H H N N 258 ILE H2 H N N 259 ILE HA H N N 260 ILE HB H N N 261 ILE HG12 H N N 262 ILE HG13 H N N 263 ILE HG21 H N N 264 ILE HG22 H N N 265 ILE HG23 H N N 266 ILE HD11 H N N 267 ILE HD12 H N N 268 ILE HD13 H N N 269 ILE HXT H N N 270 LEU N N N N 271 LEU CA C N S 272 LEU C C N N 273 LEU O O N N 274 LEU CB C N N 275 LEU CG C N N 276 LEU CD1 C N N 277 LEU CD2 C N N 278 LEU OXT O N N 279 LEU H H N N 280 LEU H2 H N N 281 LEU HA H N N 282 LEU HB2 H N N 283 LEU HB3 H N N 284 LEU HG H N N 285 LEU HD11 H N N 286 LEU HD12 H N N 287 LEU HD13 H N N 288 LEU HD21 H N N 289 LEU HD22 H N N 290 LEU HD23 H N N 291 LEU HXT H N N 292 LYS N N N N 293 LYS CA C N S 294 LYS C C N N 295 LYS O O N N 296 LYS CB C N N 297 LYS CG C N N 298 LYS CD C N N 299 LYS CE C N N 300 LYS NZ N N N 301 LYS OXT O N N 302 LYS H H N N 303 LYS H2 H N N 304 LYS HA H N N 305 LYS HB2 H N N 306 LYS HB3 H N N 307 LYS HG2 H N N 308 LYS HG3 H N N 309 LYS HD2 H N N 310 LYS HD3 H N N 311 LYS HE2 H N N 312 LYS HE3 H N N 313 LYS HZ1 H N N 314 LYS HZ2 H N N 315 LYS HZ3 H N N 316 LYS HXT H N N 317 MET N N N N 318 MET CA C N S 319 MET C C N N 320 MET O O N N 321 MET CB C N N 322 MET CG C N N 323 MET SD S N N 324 MET CE C N N 325 MET OXT O N N 326 MET H H N N 327 MET H2 H N N 328 MET HA H N N 329 MET HB2 H N N 330 MET HB3 H N N 331 MET HG2 H N N 332 MET HG3 H N N 333 MET HE1 H N N 334 MET HE2 H N N 335 MET HE3 H N N 336 MET HXT H N N 337 MG MG MG N N 338 PHE N N N N 339 PHE CA C N S 340 PHE C C N N 341 PHE O O N N 342 PHE CB C N N 343 PHE CG C Y N 344 PHE CD1 C Y N 345 PHE CD2 C Y N 346 PHE CE1 C Y N 347 PHE CE2 C Y N 348 PHE CZ C Y N 349 PHE OXT O N N 350 PHE H H N N 351 PHE H2 H N N 352 PHE HA H N N 353 PHE HB2 H N N 354 PHE HB3 H N N 355 PHE HD1 H N N 356 PHE HD2 H N N 357 PHE HE1 H N N 358 PHE HE2 H N N 359 PHE HZ H N N 360 PHE HXT H N N 361 PRO N N N N 362 PRO CA C N S 363 PRO C C N N 364 PRO O O N N 365 PRO CB C N N 366 PRO CG C N N 367 PRO CD C N N 368 PRO OXT O N N 369 PRO H H N N 370 PRO HA H N N 371 PRO HB2 H N N 372 PRO HB3 H N N 373 PRO HG2 H N N 374 PRO HG3 H N N 375 PRO HD2 H N N 376 PRO HD3 H N N 377 PRO HXT H N N 378 SER N N N N 379 SER CA C N S 380 SER C C N N 381 SER O O N N 382 SER CB C N N 383 SER OG O N N 384 SER OXT O N N 385 SER H H N N 386 SER H2 H N N 387 SER HA H N N 388 SER HB2 H N N 389 SER HB3 H N N 390 SER HG H N N 391 SER HXT H N N 392 THR N N N N 393 THR CA C N S 394 THR C C N N 395 THR O O N N 396 THR CB C N R 397 THR OG1 O N N 398 THR CG2 C N N 399 THR OXT O N N 400 THR H H N N 401 THR H2 H N N 402 THR HA H N N 403 THR HB H N N 404 THR HG1 H N N 405 THR HG21 H N N 406 THR HG22 H N N 407 THR HG23 H N N 408 THR HXT H N N 409 TRP N N N N 410 TRP CA C N S 411 TRP C C N N 412 TRP O O N N 413 TRP CB C N N 414 TRP CG C Y N 415 TRP CD1 C Y N 416 TRP CD2 C Y N 417 TRP NE1 N Y N 418 TRP CE2 C Y N 419 TRP CE3 C Y N 420 TRP CZ2 C Y N 421 TRP CZ3 C Y N 422 TRP CH2 C Y N 423 TRP OXT O N N 424 TRP H H N N 425 TRP H2 H N N 426 TRP HA H N N 427 TRP HB2 H N N 428 TRP HB3 H N N 429 TRP HD1 H N N 430 TRP HE1 H N N 431 TRP HE3 H N N 432 TRP HZ2 H N N 433 TRP HZ3 H N N 434 TRP HH2 H N N 435 TRP HXT H N N 436 TYR N N N N 437 TYR CA C N S 438 TYR C C N N 439 TYR O O N N 440 TYR CB C N N 441 TYR CG C Y N 442 TYR CD1 C Y N 443 TYR CD2 C Y N 444 TYR CE1 C Y N 445 TYR CE2 C Y N 446 TYR CZ C Y N 447 TYR OH O N N 448 TYR OXT O N N 449 TYR H H N N 450 TYR H2 H N N 451 TYR HA H N N 452 TYR HB2 H N N 453 TYR HB3 H N N 454 TYR HD1 H N N 455 TYR HD2 H N N 456 TYR HE1 H N N 457 TYR HE2 H N N 458 TYR HH H N N 459 TYR HXT H N N 460 VAL N N N N 461 VAL CA C N S 462 VAL C C N N 463 VAL O O N N 464 VAL CB C N N 465 VAL CG1 C N N 466 VAL CG2 C N N 467 VAL OXT O N N 468 VAL H H N N 469 VAL H2 H N N 470 VAL HA H N N 471 VAL HB H N N 472 VAL HG11 H N N 473 VAL HG12 H N N 474 VAL HG13 H N N 475 VAL HG21 H N N 476 VAL HG22 H N N 477 VAL HG23 H N N 478 VAL HXT H N N 479 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5DD O2P P doub N N 1 5DD "C5'" "O5'" sing N N 2 5DD "C5'" "C4'" sing N N 3 5DD P "O5'" sing N N 4 5DD P O1P sing N N 5 5DD P O3P sing N N 6 5DD "O4'" "C4'" sing N N 7 5DD "C4'" "C3'" sing N N 8 5DD O2 C2 doub N N 9 5DD "O3'" "C3'" sing N N 10 5DD "C3'" "C2'" sing N N 11 5DD C2 N1 sing N N 12 5DD C2 N3 sing N N 13 5DD "C1'" "C2'" sing N N 14 5DD "C1'" N10 sing N N 15 5DD N1 C10 doub N N 16 5DD N3 C4 sing N N 17 5DD "C2'" "O2'" sing N N 18 5DD C10 N10 sing N N 19 5DD C10 C4A sing N N 20 5DD N10 C9A sing N N 21 5DD C4 C4A sing N N 22 5DD C4 O4 doub N N 23 5DD C9A C9 doub Y N 24 5DD C9A C5A sing Y N 25 5DD C4A C1 sing N N 26 5DD C1 C5A sing N N 27 5DD C9 C8 sing Y N 28 5DD C5A C6 doub Y N 29 5DD C8 C8M sing N N 30 5DD C8 C7 doub Y N 31 5DD C6 C7 sing Y N 32 5DD C7 C7M sing N N 33 5DD O3P H1 sing N N 34 5DD O1P H2 sing N N 35 5DD "C5'" H3 sing N N 36 5DD "C5'" H4 sing N N 37 5DD "C4'" H5 sing N N 38 5DD "O4'" H6 sing N N 39 5DD "C3'" H7 sing N N 40 5DD "O3'" H8 sing N N 41 5DD "C2'" H9 sing N N 42 5DD "O2'" H10 sing N N 43 5DD "C1'" H11 sing N N 44 5DD "C1'" H12 sing N N 45 5DD C9 H13 sing N N 46 5DD C8M H14 sing N N 47 5DD C8M H15 sing N N 48 5DD C8M H16 sing N N 49 5DD C7M H17 sing N N 50 5DD C7M H18 sing N N 51 5DD C7M H19 sing N N 52 5DD C6 H20 sing N N 53 5DD C4A H21 sing N N 54 5DD N3 H22 sing N N 55 5DD C1 H23 sing N N 56 5DD C1 H24 sing N N 57 9O9 O2 C2 doub N N 58 9O9 OBA CAU sing N N 59 9O9 C2 N1 sing N N 60 9O9 C2 N3 sing N N 61 9O9 N1 C6 doub N N 62 9O9 N3 C4 sing N N 63 9O9 OAY CAT sing N N 64 9O9 CAU CAT sing N N 65 9O9 CAU CAV sing N N 66 9O9 CAW CAV sing N N 67 9O9 CAW OAX sing N N 68 9O9 CAT CAS sing N N 69 9O9 CAS NAG sing N N 70 9O9 CAV OAZ sing N N 71 9O9 OAX PBB sing N N 72 9O9 C6 NAG sing N N 73 9O9 C6 C5 sing N N 74 9O9 C4 O4 doub N N 75 9O9 C4 C5 sing N N 76 9O9 NAG CAD sing N N 77 9O9 C5 CAJ doub N N 78 9O9 OBE PBB doub N N 79 9O9 PBB OBD sing N N 80 9O9 PBB OBC sing N N 81 9O9 CAD CAC doub Y N 82 9O9 CAD CAE sing Y N 83 9O9 CAJ CAE sing N N 84 9O9 CAC CAB sing Y N 85 9O9 CAE CAF doub Y N 86 9O9 CAB CAP sing N N 87 9O9 CAB CAA doub Y N 88 9O9 CAF CAA sing Y N 89 9O9 CAA CAO sing N N 90 9O9 N3 H2 sing N N 91 9O9 CAC H3 sing N N 92 9O9 CAF H4 sing N N 93 9O9 CAJ H5 sing N N 94 9O9 CAO H6 sing N N 95 9O9 CAO H7 sing N N 96 9O9 CAO H8 sing N N 97 9O9 CAP H9 sing N N 98 9O9 CAP H10 sing N N 99 9O9 CAP H11 sing N N 100 9O9 CAS H12 sing N N 101 9O9 CAS H13 sing N N 102 9O9 CAT H14 sing N N 103 9O9 CAU H15 sing N N 104 9O9 CAV H16 sing N N 105 9O9 CAW H17 sing N N 106 9O9 CAW H18 sing N N 107 9O9 OAY H19 sing N N 108 9O9 OAZ H20 sing N N 109 9O9 OBA H21 sing N N 110 9O9 OBC H22 sing N N 111 9O9 OBD H23 sing N N 112 ALA N CA sing N N 113 ALA N H sing N N 114 ALA N H2 sing N N 115 ALA CA C sing N N 116 ALA CA CB sing N N 117 ALA CA HA sing N N 118 ALA C O doub N N 119 ALA C OXT sing N N 120 ALA CB HB1 sing N N 121 ALA CB HB2 sing N N 122 ALA CB HB3 sing N N 123 ALA OXT HXT sing N N 124 ARG N CA sing N N 125 ARG N H sing N N 126 ARG N H2 sing N N 127 ARG CA C sing N N 128 ARG CA CB sing N N 129 ARG CA HA sing N N 130 ARG C O doub N N 131 ARG C OXT sing N N 132 ARG CB CG sing N N 133 ARG CB HB2 sing N N 134 ARG CB HB3 sing N N 135 ARG CG CD sing N N 136 ARG CG HG2 sing N N 137 ARG CG HG3 sing N N 138 ARG CD NE sing N N 139 ARG CD HD2 sing N N 140 ARG CD HD3 sing N N 141 ARG NE CZ sing N N 142 ARG NE HE sing N N 143 ARG CZ NH1 sing N N 144 ARG CZ NH2 doub N N 145 ARG NH1 HH11 sing N N 146 ARG NH1 HH12 sing N N 147 ARG NH2 HH21 sing N N 148 ARG NH2 HH22 sing N N 149 ARG OXT HXT sing N N 150 ASN N CA sing N N 151 ASN N H sing N N 152 ASN N H2 sing N N 153 ASN CA C sing N N 154 ASN CA CB sing N N 155 ASN CA HA sing N N 156 ASN C O doub N N 157 ASN C OXT sing N N 158 ASN CB CG sing N N 159 ASN CB HB2 sing N N 160 ASN CB HB3 sing N N 161 ASN CG OD1 doub N N 162 ASN CG ND2 sing N N 163 ASN ND2 HD21 sing N N 164 ASN ND2 HD22 sing N N 165 ASN OXT HXT sing N N 166 ASP N CA sing N N 167 ASP N H sing N N 168 ASP N H2 sing N N 169 ASP CA C sing N N 170 ASP CA CB sing N N 171 ASP CA HA sing N N 172 ASP C O doub N N 173 ASP C OXT sing N N 174 ASP CB CG sing N N 175 ASP CB HB2 sing N N 176 ASP CB HB3 sing N N 177 ASP CG OD1 doub N N 178 ASP CG OD2 sing N N 179 ASP OD2 HD2 sing N N 180 ASP OXT HXT sing N N 181 CYS N CA sing N N 182 CYS N H sing N N 183 CYS N H2 sing N N 184 CYS CA C sing N N 185 CYS CA CB sing N N 186 CYS CA HA sing N N 187 CYS C O doub N N 188 CYS C OXT sing N N 189 CYS CB SG sing N N 190 CYS CB HB2 sing N N 191 CYS CB HB3 sing N N 192 CYS SG HG sing N N 193 CYS OXT HXT sing N N 194 GLN N CA sing N N 195 GLN N H sing N N 196 GLN N H2 sing N N 197 GLN CA C sing N N 198 GLN CA CB sing N N 199 GLN CA HA sing N N 200 GLN C O doub N N 201 GLN C OXT sing N N 202 GLN CB CG sing N N 203 GLN CB HB2 sing N N 204 GLN CB HB3 sing N N 205 GLN CG CD sing N N 206 GLN CG HG2 sing N N 207 GLN CG HG3 sing N N 208 GLN CD OE1 doub N N 209 GLN CD NE2 sing N N 210 GLN NE2 HE21 sing N N 211 GLN NE2 HE22 sing N N 212 GLN OXT HXT sing N N 213 GLU N CA sing N N 214 GLU N H sing N N 215 GLU N H2 sing N N 216 GLU CA C sing N N 217 GLU CA CB sing N N 218 GLU CA HA sing N N 219 GLU C O doub N N 220 GLU C OXT sing N N 221 GLU CB CG sing N N 222 GLU CB HB2 sing N N 223 GLU CB HB3 sing N N 224 GLU CG CD sing N N 225 GLU CG HG2 sing N N 226 GLU CG HG3 sing N N 227 GLU CD OE1 doub N N 228 GLU CD OE2 sing N N 229 GLU OE2 HE2 sing N N 230 GLU OXT HXT sing N N 231 GLY N CA sing N N 232 GLY N H sing N N 233 GLY N H2 sing N N 234 GLY CA C sing N N 235 GLY CA HA2 sing N N 236 GLY CA HA3 sing N N 237 GLY C O doub N N 238 GLY C OXT sing N N 239 GLY OXT HXT sing N N 240 HOH O H1 sing N N 241 HOH O H2 sing N N 242 ILE N CA sing N N 243 ILE N H sing N N 244 ILE N H2 sing N N 245 ILE CA C sing N N 246 ILE CA CB sing N N 247 ILE CA HA sing N N 248 ILE C O doub N N 249 ILE C OXT sing N N 250 ILE CB CG1 sing N N 251 ILE CB CG2 sing N N 252 ILE CB HB sing N N 253 ILE CG1 CD1 sing N N 254 ILE CG1 HG12 sing N N 255 ILE CG1 HG13 sing N N 256 ILE CG2 HG21 sing N N 257 ILE CG2 HG22 sing N N 258 ILE CG2 HG23 sing N N 259 ILE CD1 HD11 sing N N 260 ILE CD1 HD12 sing N N 261 ILE CD1 HD13 sing N N 262 ILE OXT HXT sing N N 263 LEU N CA sing N N 264 LEU N H sing N N 265 LEU N H2 sing N N 266 LEU CA C sing N N 267 LEU CA CB sing N N 268 LEU CA HA sing N N 269 LEU C O doub N N 270 LEU C OXT sing N N 271 LEU CB CG sing N N 272 LEU CB HB2 sing N N 273 LEU CB HB3 sing N N 274 LEU CG CD1 sing N N 275 LEU CG CD2 sing N N 276 LEU CG HG sing N N 277 LEU CD1 HD11 sing N N 278 LEU CD1 HD12 sing N N 279 LEU CD1 HD13 sing N N 280 LEU CD2 HD21 sing N N 281 LEU CD2 HD22 sing N N 282 LEU CD2 HD23 sing N N 283 LEU OXT HXT sing N N 284 LYS N CA sing N N 285 LYS N H sing N N 286 LYS N H2 sing N N 287 LYS CA C sing N N 288 LYS CA CB sing N N 289 LYS CA HA sing N N 290 LYS C O doub N N 291 LYS C OXT sing N N 292 LYS CB CG sing N N 293 LYS CB HB2 sing N N 294 LYS CB HB3 sing N N 295 LYS CG CD sing N N 296 LYS CG HG2 sing N N 297 LYS CG HG3 sing N N 298 LYS CD CE sing N N 299 LYS CD HD2 sing N N 300 LYS CD HD3 sing N N 301 LYS CE NZ sing N N 302 LYS CE HE2 sing N N 303 LYS CE HE3 sing N N 304 LYS NZ HZ1 sing N N 305 LYS NZ HZ2 sing N N 306 LYS NZ HZ3 sing N N 307 LYS OXT HXT sing N N 308 MET N CA sing N N 309 MET N H sing N N 310 MET N H2 sing N N 311 MET CA C sing N N 312 MET CA CB sing N N 313 MET CA HA sing N N 314 MET C O doub N N 315 MET C OXT sing N N 316 MET CB CG sing N N 317 MET CB HB2 sing N N 318 MET CB HB3 sing N N 319 MET CG SD sing N N 320 MET CG HG2 sing N N 321 MET CG HG3 sing N N 322 MET SD CE sing N N 323 MET CE HE1 sing N N 324 MET CE HE2 sing N N 325 MET CE HE3 sing N N 326 MET OXT HXT sing N N 327 PHE N CA sing N N 328 PHE N H sing N N 329 PHE N H2 sing N N 330 PHE CA C sing N N 331 PHE CA CB sing N N 332 PHE CA HA sing N N 333 PHE C O doub N N 334 PHE C OXT sing N N 335 PHE CB CG sing N N 336 PHE CB HB2 sing N N 337 PHE CB HB3 sing N N 338 PHE CG CD1 doub Y N 339 PHE CG CD2 sing Y N 340 PHE CD1 CE1 sing Y N 341 PHE CD1 HD1 sing N N 342 PHE CD2 CE2 doub Y N 343 PHE CD2 HD2 sing N N 344 PHE CE1 CZ doub Y N 345 PHE CE1 HE1 sing N N 346 PHE CE2 CZ sing Y N 347 PHE CE2 HE2 sing N N 348 PHE CZ HZ sing N N 349 PHE OXT HXT sing N N 350 PRO N CA sing N N 351 PRO N CD sing N N 352 PRO N H sing N N 353 PRO CA C sing N N 354 PRO CA CB sing N N 355 PRO CA HA sing N N 356 PRO C O doub N N 357 PRO C OXT sing N N 358 PRO CB CG sing N N 359 PRO CB HB2 sing N N 360 PRO CB HB3 sing N N 361 PRO CG CD sing N N 362 PRO CG HG2 sing N N 363 PRO CG HG3 sing N N 364 PRO CD HD2 sing N N 365 PRO CD HD3 sing N N 366 PRO OXT HXT sing N N 367 SER N CA sing N N 368 SER N H sing N N 369 SER N H2 sing N N 370 SER CA C sing N N 371 SER CA CB sing N N 372 SER CA HA sing N N 373 SER C O doub N N 374 SER C OXT sing N N 375 SER CB OG sing N N 376 SER CB HB2 sing N N 377 SER CB HB3 sing N N 378 SER OG HG sing N N 379 SER OXT HXT sing N N 380 THR N CA sing N N 381 THR N H sing N N 382 THR N H2 sing N N 383 THR CA C sing N N 384 THR CA CB sing N N 385 THR CA HA sing N N 386 THR C O doub N N 387 THR C OXT sing N N 388 THR CB OG1 sing N N 389 THR CB CG2 sing N N 390 THR CB HB sing N N 391 THR OG1 HG1 sing N N 392 THR CG2 HG21 sing N N 393 THR CG2 HG22 sing N N 394 THR CG2 HG23 sing N N 395 THR OXT HXT sing N N 396 TRP N CA sing N N 397 TRP N H sing N N 398 TRP N H2 sing N N 399 TRP CA C sing N N 400 TRP CA CB sing N N 401 TRP CA HA sing N N 402 TRP C O doub N N 403 TRP C OXT sing N N 404 TRP CB CG sing N N 405 TRP CB HB2 sing N N 406 TRP CB HB3 sing N N 407 TRP CG CD1 doub Y N 408 TRP CG CD2 sing Y N 409 TRP CD1 NE1 sing Y N 410 TRP CD1 HD1 sing N N 411 TRP CD2 CE2 doub Y N 412 TRP CD2 CE3 sing Y N 413 TRP NE1 CE2 sing Y N 414 TRP NE1 HE1 sing N N 415 TRP CE2 CZ2 sing Y N 416 TRP CE3 CZ3 doub Y N 417 TRP CE3 HE3 sing N N 418 TRP CZ2 CH2 doub Y N 419 TRP CZ2 HZ2 sing N N 420 TRP CZ3 CH2 sing Y N 421 TRP CZ3 HZ3 sing N N 422 TRP CH2 HH2 sing N N 423 TRP OXT HXT sing N N 424 TYR N CA sing N N 425 TYR N H sing N N 426 TYR N H2 sing N N 427 TYR CA C sing N N 428 TYR CA CB sing N N 429 TYR CA HA sing N N 430 TYR C O doub N N 431 TYR C OXT sing N N 432 TYR CB CG sing N N 433 TYR CB HB2 sing N N 434 TYR CB HB3 sing N N 435 TYR CG CD1 doub Y N 436 TYR CG CD2 sing Y N 437 TYR CD1 CE1 sing Y N 438 TYR CD1 HD1 sing N N 439 TYR CD2 CE2 doub Y N 440 TYR CD2 HD2 sing N N 441 TYR CE1 CZ doub Y N 442 TYR CE1 HE1 sing N N 443 TYR CE2 CZ sing Y N 444 TYR CE2 HE2 sing N N 445 TYR CZ OH sing N N 446 TYR OH HH sing N N 447 TYR OXT HXT sing N N 448 VAL N CA sing N N 449 VAL N H sing N N 450 VAL N H2 sing N N 451 VAL CA C sing N N 452 VAL CA CB sing N N 453 VAL CA HA sing N N 454 VAL C O doub N N 455 VAL C OXT sing N N 456 VAL CB CG1 sing N N 457 VAL CB CG2 sing N N 458 VAL CB HB sing N N 459 VAL CG1 HG11 sing N N 460 VAL CG1 HG12 sing N N 461 VAL CG1 HG13 sing N N 462 VAL CG2 HG21 sing N N 463 VAL CG2 HG22 sing N N 464 VAL CG2 HG23 sing N N 465 VAL OXT HXT sing N N 466 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5A8B _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 6I25 _atom_sites.fract_transf_matrix[1][1] 0.009408 _atom_sites.fract_transf_matrix[1][2] 0.005432 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010864 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014736 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL MG N O P S # loop_