data_6ISW # _entry.id 6ISW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6ISW pdb_00006isw 10.2210/pdb6isw/pdb WWPDB D_1300009680 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6ISW _pdbx_database_status.recvd_initial_deposition_date 2018-11-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Saikrishnan, K.' 1 ? 'Nuthanakanti, A.' 2 ? 'Srivatsan, S.G.' 3 ? 'Ahmad, I.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 47 _citation.language ? _citation.page_first 6059 _citation.page_last 6072 _citation.title 'Probing G-quadruplex topologies and recognition concurrently in real time and 3D using a dual-app nucleoside probe.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkz419 _citation.pdbx_database_id_PubMed 31106340 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nuthanakanti, A.' 1 ? primary 'Ahmed, I.' 2 ? primary 'Khatik, S.Y.' 3 ? primary 'Saikrishnan, K.' 4 ? primary 'Srivatsan, S.G.' 5 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6ISW _cell.details ? _cell.formula_units_Z ? _cell.length_a 35.204 _cell.length_a_esd ? _cell.length_b 42.280 _cell.length_b_esd ? _cell.length_c 49.924 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ISW _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 2 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'DNA (22-MER)' 7082.490 1 ? ? ? ? 2 non-polymer syn 'POTASSIUM ION' 39.098 3 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(DA)(DG)(DG)(DG)(DT)(DT)(DA)(DG)(DG)(DG)(DT)(AWC)(DA)(DG)(DG)(DG)(DT)(DT)(DA) (DG)(DG)(DG) ; _entity_poly.pdbx_seq_one_letter_code_can AGGGTTAGGGTXAGGGTTAGGG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DG n 1 3 DG n 1 4 DG n 1 5 DT n 1 6 DT n 1 7 DA n 1 8 DG n 1 9 DG n 1 10 DG n 1 11 DT n 1 12 AWC n 1 13 DA n 1 14 DG n 1 15 DG n 1 16 DG n 1 17 DT n 1 18 DT n 1 19 DA n 1 20 DG n 1 21 DG n 1 22 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 22 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6ISW _struct_ref.pdbx_db_accession 6ISW _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6ISW _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 22 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6ISW _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 22 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 22 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight AWC 'DNA linking' . "2'-deoxy-5'-O-[(R)-hydroxy(oxo)-lambda~5~-phosphanyl]-5-selenophen-2-yluridine" ? 'C13 H15 N2 O7 P Se' 421.201 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6ISW _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.61 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 52.89 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.05M potassium cacodylate (pH = 7.2), 0.7M ammonium sulfate, 0.05M KCl, 0.01M CaCl2 and 12.5% PEG400.' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-06-24 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID30B' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID30B _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6ISW _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.30 _reflns.d_resolution_low 42.28 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 7204 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 12.7 _reflns.pdbx_Rmerge_I_obs 0.119 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 13.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.3 _reflns_shell.d_res_low 2.38 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.7 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 341 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.744 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value 0.759 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details 'SF FILE CONTAINS FRIEDEL PAIRS UNDER F_MINUS AND F_PLUS COLUMNS.' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6ISW _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.300 _refine.ls_d_res_low 42.280 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 6301 _refine.ls_number_reflns_R_free 318 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.30 _refine.ls_percent_reflns_R_free 5.05 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2530 _refine.ls_R_factor_R_free 0.2827 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2515 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.94 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1KF1 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 34.78 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.10 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 469 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 472 _refine_hist.d_res_high 2.300 _refine_hist.d_res_low 42.280 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.003 ? 529 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.612 ? 819 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 31.259 ? 212 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.021 ? 86 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.001 ? 23 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.3000 2.8977 . . 160 2950 97.00 . . . 0.3195 . 0.3200 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8977 42.2871 . . 158 3033 100.00 . . . 0.2739 . 0.2362 . . . . . . . . . . # _struct.entry_id 6ISW _struct.title 'Structure of human telomeric DNA with 5-selenophene-modified deoxyuridine at residue 12' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6ISW _struct_keywords.text 'Human telomere, parallel G-quadruplex, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? A DT 11 "O3'" ? ? ? 1_555 A AWC 12 P d ? A DT 11 A AWC 12 1_555 ? ? ? ? ? ? ? 1.593 ? ? covale2 covale one ? A AWC 12 "O3'" d ? ? 1_555 A DA 13 P ? ? A AWC 12 A DA 13 1_555 ? ? ? ? ? ? ? 1.619 ? ? metalc1 metalc ? ? A DG 2 O6 ? ? ? 1_555 C K . K ? ? A DG 2 A K 102 1_555 ? ? ? ? ? ? ? 2.890 ? ? metalc2 metalc ? ? A DG 2 O6 ? ? ? 1_555 D K . K ? ? A DG 2 A K 103 1_555 ? ? ? ? ? ? ? 2.921 ? ? metalc3 metalc ? ? A DG 2 O6 ? ? ? 1_555 D K . K ? ? A DG 2 A K 103 2_855 ? ? ? ? ? ? ? 2.919 ? ? metalc4 metalc ? ? A DG 3 O6 ? ? ? 1_555 B K . K ? ? A DG 3 A K 101 1_555 ? ? ? ? ? ? ? 2.919 ? ? metalc5 metalc ? ? A DG 3 O6 ? ? ? 1_555 C K . K ? ? A DG 3 A K 102 1_555 ? ? ? ? ? ? ? 2.897 ? ? metalc6 metalc ? ? A DG 4 O6 ? ? ? 1_555 B K . K ? ? A DG 4 A K 101 1_555 ? ? ? ? ? ? ? 2.905 ? ? metalc7 metalc ? ? A DG 8 O6 ? ? ? 1_555 C K . K ? ? A DG 8 A K 102 1_555 ? ? ? ? ? ? ? 2.864 ? ? metalc8 metalc ? ? A DG 8 O6 ? ? ? 1_555 D K . K ? ? A DG 8 A K 103 1_555 ? ? ? ? ? ? ? 2.851 ? ? metalc9 metalc ? ? A DG 8 O6 ? ? ? 1_555 D K . K ? ? A DG 8 A K 103 2_855 ? ? ? ? ? ? ? 2.851 ? ? metalc10 metalc ? ? A DG 9 O6 ? ? ? 1_555 B K . K ? ? A DG 9 A K 101 1_555 ? ? ? ? ? ? ? 2.926 ? ? metalc11 metalc ? ? A DG 9 O6 ? ? ? 1_555 C K . K ? ? A DG 9 A K 102 1_555 ? ? ? ? ? ? ? 2.826 ? ? metalc12 metalc ? ? A DG 10 O6 ? ? ? 1_555 B K . K ? ? A DG 10 A K 101 1_555 ? ? ? ? ? ? ? 2.882 ? ? metalc13 metalc ? ? A DG 14 O6 ? ? ? 1_555 C K . K ? ? A DG 14 A K 102 1_555 ? ? ? ? ? ? ? 2.902 ? ? metalc14 metalc ? ? A DG 14 O6 ? ? ? 1_555 D K . K ? ? A DG 14 A K 103 1_555 ? ? ? ? ? ? ? 2.880 ? ? metalc15 metalc ? ? A DG 14 O6 ? ? ? 1_555 D K . K ? ? A DG 14 A K 103 2_855 ? ? ? ? ? ? ? 2.880 ? ? metalc16 metalc ? ? A DG 15 O6 ? ? ? 1_555 B K . K ? ? A DG 15 A K 101 1_555 ? ? ? ? ? ? ? 2.898 ? ? metalc17 metalc ? ? A DG 15 O6 ? ? ? 1_555 C K . K ? ? A DG 15 A K 102 1_555 ? ? ? ? ? ? ? 2.854 ? ? metalc18 metalc ? ? A DG 16 O6 ? ? ? 1_555 B K . K ? ? A DG 16 A K 101 1_555 ? ? ? ? ? ? ? 2.948 ? ? metalc19 metalc ? ? A DG 20 O6 ? ? ? 1_555 C K . K ? ? A DG 20 A K 102 1_555 ? ? ? ? ? ? ? 2.862 ? ? metalc20 metalc ? ? A DG 20 O6 ? ? ? 1_555 D K . K ? ? A DG 20 A K 103 1_555 ? ? ? ? ? ? ? 2.863 ? ? metalc21 metalc ? ? A DG 20 O6 ? ? ? 1_555 D K . K ? ? A DG 20 A K 103 2_855 ? ? ? ? ? ? ? 2.862 ? ? metalc22 metalc ? ? A DG 21 O6 ? ? ? 1_555 B K . K ? ? A DG 21 A K 101 1_555 ? ? ? ? ? ? ? 2.943 ? ? metalc23 metalc ? ? A DG 21 O6 ? ? ? 1_555 C K . K ? ? A DG 21 A K 102 1_555 ? ? ? ? ? ? ? 2.848 ? ? metalc24 metalc ? ? A DG 22 O6 ? ? ? 1_555 B K . K ? ? A DG 22 A K 101 1_555 ? ? ? ? ? ? ? 2.872 ? ? hydrog1 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DG 8 O6 ? ? A DG 2 A DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog2 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DG 8 N7 ? ? A DG 2 A DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? A DG 2 N7 ? ? ? 1_555 A DG 20 N2 ? ? A DG 2 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DG 20 N1 ? ? A DG 2 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DG 9 O6 ? ? A DG 3 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DG 9 N7 ? ? A DG 3 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A DG 3 N7 ? ? ? 1_555 A DG 21 N2 ? ? A DG 3 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DG 21 N1 ? ? A DG 3 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DG 10 O6 ? ? A DG 4 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DG 10 N7 ? ? A DG 4 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? A DG 4 N7 ? ? ? 1_555 A DG 22 N2 ? ? A DG 4 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DG 22 N1 ? ? A DG 4 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A DG 8 N1 ? ? ? 1_555 A DG 14 O6 ? ? A DG 8 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A DG 8 N2 ? ? ? 1_555 A DG 14 N7 ? ? A DG 8 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DG 15 O6 ? ? A DG 9 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DG 15 N7 ? ? A DG 9 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DG 16 O6 ? ? A DG 10 A DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DG 16 N7 ? ? A DG 10 A DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 14 N1 ? ? ? 1_555 A DG 20 O6 ? ? A DG 14 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A DG 14 N2 ? ? ? 1_555 A DG 20 N7 ? ? A DG 14 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A DG 15 N1 ? ? ? 1_555 A DG 21 O6 ? ? A DG 15 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A DG 15 N2 ? ? ? 1_555 A DG 21 N7 ? ? A DG 15 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A DG 16 N1 ? ? ? 1_555 A DG 22 O6 ? ? A DG 16 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A DG 16 N2 ? ? ? 1_555 A DG 22 N7 ? ? A DG 16 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A K 101 ? 9 'binding site for residue K A 101' AC2 Software A K 102 ? 10 'binding site for residue K A 102' AC3 Software A K 103 ? 5 'binding site for residue K A 103' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 DG A 3 ? DG A 3 . ? 1_555 ? 2 AC1 9 DG A 4 ? DG A 4 . ? 1_555 ? 3 AC1 9 DG A 9 ? DG A 9 . ? 1_555 ? 4 AC1 9 DG A 10 ? DG A 10 . ? 1_555 ? 5 AC1 9 DG A 15 ? DG A 15 . ? 1_555 ? 6 AC1 9 DG A 16 ? DG A 16 . ? 1_555 ? 7 AC1 9 DG A 21 ? DG A 21 . ? 1_555 ? 8 AC1 9 DG A 22 ? DG A 22 . ? 1_555 ? 9 AC1 9 K C . ? K A 102 . ? 1_555 ? 10 AC2 10 DG A 2 ? DG A 2 . ? 1_555 ? 11 AC2 10 DG A 3 ? DG A 3 . ? 1_555 ? 12 AC2 10 DG A 8 ? DG A 8 . ? 1_555 ? 13 AC2 10 DG A 9 ? DG A 9 . ? 1_555 ? 14 AC2 10 DG A 14 ? DG A 14 . ? 1_555 ? 15 AC2 10 DG A 15 ? DG A 15 . ? 1_555 ? 16 AC2 10 DG A 20 ? DG A 20 . ? 1_555 ? 17 AC2 10 DG A 21 ? DG A 21 . ? 1_555 ? 18 AC2 10 K B . ? K A 101 . ? 1_555 ? 19 AC2 10 K D . ? K A 103 . ? 1_555 ? 20 AC3 5 DG A 2 ? DG A 2 . ? 1_555 ? 21 AC3 5 DG A 8 ? DG A 8 . ? 1_555 ? 22 AC3 5 DG A 14 ? DG A 14 . ? 1_555 ? 23 AC3 5 DG A 20 ? DG A 20 . ? 1_555 ? 24 AC3 5 K C . ? K A 102 . ? 1_555 ? # _atom_sites.entry_id 6ISW _atom_sites.fract_transf_matrix[1][1] 0.028406 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023652 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020030 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C K N O P SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA DA A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DG 4 4 4 DG DG A . n A 1 5 DT 5 5 5 DT DT A . n A 1 6 DT 6 6 6 DT DT A . n A 1 7 DA 7 7 7 DA DA A . n A 1 8 DG 8 8 8 DG DG A . n A 1 9 DG 9 9 9 DG DG A . n A 1 10 DG 10 10 10 DG DG A . n A 1 11 DT 11 11 11 DT DT A . n A 1 12 AWC 12 12 12 AWC 75B A . n A 1 13 DA 13 13 13 DA DA A . n A 1 14 DG 14 14 14 DG DG A . n A 1 15 DG 15 15 15 DG DG A . n A 1 16 DG 16 16 16 DG DG A . n A 1 17 DT 17 17 17 DT DT A . n A 1 18 DT 18 18 18 DT DT A . n A 1 19 DA 19 19 19 DA DA A . n A 1 20 DG 20 20 20 DG DG A . n A 1 21 DG 21 21 21 DG DG A . n A 1 22 DG 22 22 22 DG DG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K 1 101 1 K K A . C 2 K 1 102 2 K K A . D 2 K 1 103 3 K K A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 70 ? 1 MORE -0 ? 1 'SSA (A^2)' 4660 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id K _pdbx_struct_special_symmetry.auth_seq_id 103 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id K _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 3 ? A DG 3 ? 1_555 70.8 ? 2 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 8 ? A DG 8 ? 1_555 73.8 ? 3 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 8 ? A DG 8 ? 1_555 97.2 ? 4 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 128.8 ? 5 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 75.1 ? 6 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 73.9 ? 7 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 110.4 ? 8 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 161.9 ? 9 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 66.9 ? 10 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 91.6 ? 11 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 158.4 ? 12 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 114.0 ? 13 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 124.3 ? 14 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 71.6 ? 15 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 71.9 ? 16 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 70.3 ? 17 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 123.8 ? 18 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 109.0 ? 19 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 159.1 ? 20 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 71.6 ? 21 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 91.0 ? 22 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 89.4 ? 23 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 73.0 ? 24 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 162.8 ? 25 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 115.7 ? 26 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 124.5 ? 27 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 72.9 ? 28 O6 ? A DG 20 ? A DG 20 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 67.6 ? 29 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 2 ? A DG 2 ? 1_555 0.0 ? 30 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 8 ? A DG 8 ? 1_555 73.5 ? 31 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 8 ? A DG 8 ? 1_555 73.5 ? 32 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 8 ? A DG 8 ? 1_555 73.5 ? 33 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 8 ? A DG 8 ? 1_555 73.5 ? 34 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 8 ? A DG 8 ? 1_555 0.0 ? 35 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 110.2 ? 36 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 110.2 ? 37 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 67.3 ? 38 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 67.3 ? 39 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 110.2 ? 40 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 110.2 ? 41 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 67.3 ? 42 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 67.3 ? 43 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 14 ? A DG 14 ? 1_555 0.0 ? 44 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 69.9 ? 45 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 69.9 ? 46 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 109.3 ? 47 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 109.3 ? 48 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 71.9 ? 49 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 71.9 ? 50 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 69.9 ? 51 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 69.9 ? 52 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 109.3 ? 53 O6 ? A DG 8 ? A DG 8 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 109.3 ? 54 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 71.9 ? 55 O6 ? A DG 14 ? A DG 14 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 71.9 ? 56 O6 ? A DG 20 ? A DG 20 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 20 ? A DG 20 ? 1_555 0.0 ? 57 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 4 ? A DG 4 ? 1_555 71.0 ? 58 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 73.3 ? 59 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 9 ? A DG 9 ? 1_555 89.4 ? 60 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 127.5 ? 61 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 72.3 ? 62 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 70.0 ? 63 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 112.0 ? 64 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 155.7 ? 65 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 69.5 ? 66 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 15 ? A DG 15 ? 1_555 88.6 ? 67 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 160.0 ? 68 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 110.4 ? 69 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 126.1 ? 70 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 69.7 ? 71 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 75.3 ? 72 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 71.4 ? 73 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 130.0 ? 74 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 109.9 ? 75 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 157.3 ? 76 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 70.9 ? 77 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 21 ? A DG 21 ? 1_555 94.9 ? 78 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 88.3 ? 79 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 72.7 ? 80 O6 ? A DG 9 ? A DG 9 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 157.9 ? 81 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 114.8 ? 82 O6 ? A DG 15 ? A DG 15 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 130.5 ? 83 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 73.7 ? 84 O6 ? A DG 21 ? A DG 21 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A DG 22 ? A DG 22 ? 1_555 74.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-05-15 2 'Structure model' 1 1 2019-06-05 3 'Structure model' 1 2 2019-07-24 4 'Structure model' 1 3 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Derived calculations' 8 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' citation_author 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' database_2 8 4 'Structure model' pdbx_initial_refinement_model 9 4 'Structure model' pdbx_struct_conn_angle 10 4 'Structure model' struct_conn 11 4 'Structure model' struct_conn_type # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_DOI' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 3 'Structure model' '_citation.journal_volume' 4 3 'Structure model' '_citation.page_first' 5 3 'Structure model' '_citation.page_last' 6 3 'Structure model' '_citation_author.name' 7 4 'Structure model' '_database_2.pdbx_DOI' 8 4 'Structure model' '_database_2.pdbx_database_accession' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.value' 14 4 'Structure model' '_struct_conn.conn_type_id' 15 4 'Structure model' '_struct_conn.id' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 18 4 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 19 4 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 20 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 26 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 30 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 31 4 'Structure model' '_struct_conn.ptnr2_symmetry' 32 4 'Structure model' '_struct_conn_type.id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.10.1_2155: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal AWC P P N N 1 AWC "C5'" C N N 2 AWC "O5'" O N N 3 AWC "C4'" C N R 4 AWC "O4'" O N N 5 AWC "C3'" C N S 6 AWC "O3'" O N N 7 AWC "C2'" C N N 8 AWC "C1'" C N R 9 AWC N1 N N N 10 AWC C2 C N N 11 AWC O2 O N N 12 AWC N3 N N N 13 AWC C4 C N N 14 AWC O4 O N N 15 AWC C5 C N N 16 AWC C6 C N N 17 AWC OP1 O N N 18 AWC OP2 O N N 19 AWC C7 C Y N 20 AWC C8 C Y N 21 AWC C9 C Y N 22 AWC C10 C Y N 23 AWC SE SE Y N 24 AWC H5S H N N 25 AWC "H5'" H N N 26 AWC "H4'" H N N 27 AWC "H3'" H N N 28 AWC H1 H N N 29 AWC H5T H N N 30 AWC "H2'" H N N 31 AWC "H1'" H N N 32 AWC H3 H N N 33 AWC H6 H N N 34 AWC H2 H N N 35 AWC H4 H N N 36 AWC H8 H N N 37 AWC H9 H N N 38 AWC H10 H N N 39 DA OP3 O N N 40 DA P P N N 41 DA OP1 O N N 42 DA OP2 O N N 43 DA "O5'" O N N 44 DA "C5'" C N N 45 DA "C4'" C N R 46 DA "O4'" O N N 47 DA "C3'" C N S 48 DA "O3'" O N N 49 DA "C2'" C N N 50 DA "C1'" C N R 51 DA N9 N Y N 52 DA C8 C Y N 53 DA N7 N Y N 54 DA C5 C Y N 55 DA C6 C Y N 56 DA N6 N N N 57 DA N1 N Y N 58 DA C2 C Y N 59 DA N3 N Y N 60 DA C4 C Y N 61 DA HOP3 H N N 62 DA HOP2 H N N 63 DA "H5'" H N N 64 DA "H5''" H N N 65 DA "H4'" H N N 66 DA "H3'" H N N 67 DA "HO3'" H N N 68 DA "H2'" H N N 69 DA "H2''" H N N 70 DA "H1'" H N N 71 DA H8 H N N 72 DA H61 H N N 73 DA H62 H N N 74 DA H2 H N N 75 DG OP3 O N N 76 DG P P N N 77 DG OP1 O N N 78 DG OP2 O N N 79 DG "O5'" O N N 80 DG "C5'" C N N 81 DG "C4'" C N R 82 DG "O4'" O N N 83 DG "C3'" C N S 84 DG "O3'" O N N 85 DG "C2'" C N N 86 DG "C1'" C N R 87 DG N9 N Y N 88 DG C8 C Y N 89 DG N7 N Y N 90 DG C5 C Y N 91 DG C6 C N N 92 DG O6 O N N 93 DG N1 N N N 94 DG C2 C N N 95 DG N2 N N N 96 DG N3 N N N 97 DG C4 C Y N 98 DG HOP3 H N N 99 DG HOP2 H N N 100 DG "H5'" H N N 101 DG "H5''" H N N 102 DG "H4'" H N N 103 DG "H3'" H N N 104 DG "HO3'" H N N 105 DG "H2'" H N N 106 DG "H2''" H N N 107 DG "H1'" H N N 108 DG H8 H N N 109 DG H1 H N N 110 DG H21 H N N 111 DG H22 H N N 112 DT OP3 O N N 113 DT P P N N 114 DT OP1 O N N 115 DT OP2 O N N 116 DT "O5'" O N N 117 DT "C5'" C N N 118 DT "C4'" C N R 119 DT "O4'" O N N 120 DT "C3'" C N S 121 DT "O3'" O N N 122 DT "C2'" C N N 123 DT "C1'" C N R 124 DT N1 N N N 125 DT C2 C N N 126 DT O2 O N N 127 DT N3 N N N 128 DT C4 C N N 129 DT O4 O N N 130 DT C5 C N N 131 DT C7 C N N 132 DT C6 C N N 133 DT HOP3 H N N 134 DT HOP2 H N N 135 DT "H5'" H N N 136 DT "H5''" H N N 137 DT "H4'" H N N 138 DT "H3'" H N N 139 DT "HO3'" H N N 140 DT "H2'" H N N 141 DT "H2''" H N N 142 DT "H1'" H N N 143 DT H3 H N N 144 DT H71 H N N 145 DT H72 H N N 146 DT H73 H N N 147 DT H6 H N N 148 K K K N N 149 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AWC OP2 P doub N N 1 AWC "C5'" "O5'" sing N N 2 AWC "C5'" "C4'" sing N N 3 AWC "O3'" "C3'" sing N N 4 AWC "C3'" "C4'" sing N N 5 AWC "C3'" "C2'" sing N N 6 AWC P "O5'" sing N N 7 AWC P OP1 sing N N 8 AWC "C4'" "O4'" sing N N 9 AWC "C2'" "C1'" sing N N 10 AWC "O4'" "C1'" sing N N 11 AWC "C1'" N1 sing N N 12 AWC C8 C9 sing Y N 13 AWC C8 C7 doub Y N 14 AWC C6 N1 sing N N 15 AWC C6 C5 doub N N 16 AWC N1 C2 sing N N 17 AWC C9 C10 doub Y N 18 AWC C7 C5 sing N N 19 AWC C7 SE sing Y N 20 AWC C5 C4 sing N N 21 AWC C2 O2 doub N N 22 AWC C2 N3 sing N N 23 AWC C10 SE sing Y N 24 AWC C4 N3 sing N N 25 AWC C4 O4 doub N N 26 AWC "C5'" H5S sing N N 27 AWC "C5'" "H5'" sing N N 28 AWC "C4'" "H4'" sing N N 29 AWC "C3'" "H3'" sing N N 30 AWC "O3'" H1 sing N N 31 AWC "C2'" H5T sing N N 32 AWC "C2'" "H2'" sing N N 33 AWC "C1'" "H1'" sing N N 34 AWC N3 H3 sing N N 35 AWC C6 H6 sing N N 36 AWC OP1 H2 sing N N 37 AWC C8 H8 sing N N 38 AWC C9 H9 sing N N 39 AWC C10 H10 sing N N 40 AWC P H4 sing N N 41 DA OP3 P sing N N 42 DA OP3 HOP3 sing N N 43 DA P OP1 doub N N 44 DA P OP2 sing N N 45 DA P "O5'" sing N N 46 DA OP2 HOP2 sing N N 47 DA "O5'" "C5'" sing N N 48 DA "C5'" "C4'" sing N N 49 DA "C5'" "H5'" sing N N 50 DA "C5'" "H5''" sing N N 51 DA "C4'" "O4'" sing N N 52 DA "C4'" "C3'" sing N N 53 DA "C4'" "H4'" sing N N 54 DA "O4'" "C1'" sing N N 55 DA "C3'" "O3'" sing N N 56 DA "C3'" "C2'" sing N N 57 DA "C3'" "H3'" sing N N 58 DA "O3'" "HO3'" sing N N 59 DA "C2'" "C1'" sing N N 60 DA "C2'" "H2'" sing N N 61 DA "C2'" "H2''" sing N N 62 DA "C1'" N9 sing N N 63 DA "C1'" "H1'" sing N N 64 DA N9 C8 sing Y N 65 DA N9 C4 sing Y N 66 DA C8 N7 doub Y N 67 DA C8 H8 sing N N 68 DA N7 C5 sing Y N 69 DA C5 C6 sing Y N 70 DA C5 C4 doub Y N 71 DA C6 N6 sing N N 72 DA C6 N1 doub Y N 73 DA N6 H61 sing N N 74 DA N6 H62 sing N N 75 DA N1 C2 sing Y N 76 DA C2 N3 doub Y N 77 DA C2 H2 sing N N 78 DA N3 C4 sing Y N 79 DG OP3 P sing N N 80 DG OP3 HOP3 sing N N 81 DG P OP1 doub N N 82 DG P OP2 sing N N 83 DG P "O5'" sing N N 84 DG OP2 HOP2 sing N N 85 DG "O5'" "C5'" sing N N 86 DG "C5'" "C4'" sing N N 87 DG "C5'" "H5'" sing N N 88 DG "C5'" "H5''" sing N N 89 DG "C4'" "O4'" sing N N 90 DG "C4'" "C3'" sing N N 91 DG "C4'" "H4'" sing N N 92 DG "O4'" "C1'" sing N N 93 DG "C3'" "O3'" sing N N 94 DG "C3'" "C2'" sing N N 95 DG "C3'" "H3'" sing N N 96 DG "O3'" "HO3'" sing N N 97 DG "C2'" "C1'" sing N N 98 DG "C2'" "H2'" sing N N 99 DG "C2'" "H2''" sing N N 100 DG "C1'" N9 sing N N 101 DG "C1'" "H1'" sing N N 102 DG N9 C8 sing Y N 103 DG N9 C4 sing Y N 104 DG C8 N7 doub Y N 105 DG C8 H8 sing N N 106 DG N7 C5 sing Y N 107 DG C5 C6 sing N N 108 DG C5 C4 doub Y N 109 DG C6 O6 doub N N 110 DG C6 N1 sing N N 111 DG N1 C2 sing N N 112 DG N1 H1 sing N N 113 DG C2 N2 sing N N 114 DG C2 N3 doub N N 115 DG N2 H21 sing N N 116 DG N2 H22 sing N N 117 DG N3 C4 sing N N 118 DT OP3 P sing N N 119 DT OP3 HOP3 sing N N 120 DT P OP1 doub N N 121 DT P OP2 sing N N 122 DT P "O5'" sing N N 123 DT OP2 HOP2 sing N N 124 DT "O5'" "C5'" sing N N 125 DT "C5'" "C4'" sing N N 126 DT "C5'" "H5'" sing N N 127 DT "C5'" "H5''" sing N N 128 DT "C4'" "O4'" sing N N 129 DT "C4'" "C3'" sing N N 130 DT "C4'" "H4'" sing N N 131 DT "O4'" "C1'" sing N N 132 DT "C3'" "O3'" sing N N 133 DT "C3'" "C2'" sing N N 134 DT "C3'" "H3'" sing N N 135 DT "O3'" "HO3'" sing N N 136 DT "C2'" "C1'" sing N N 137 DT "C2'" "H2'" sing N N 138 DT "C2'" "H2''" sing N N 139 DT "C1'" N1 sing N N 140 DT "C1'" "H1'" sing N N 141 DT N1 C2 sing N N 142 DT N1 C6 sing N N 143 DT C2 O2 doub N N 144 DT C2 N3 sing N N 145 DT N3 C4 sing N N 146 DT N3 H3 sing N N 147 DT C4 O4 doub N N 148 DT C4 C5 sing N N 149 DT C5 C7 sing N N 150 DT C5 C6 doub N N 151 DT C7 H71 sing N N 152 DT C7 H72 sing N N 153 DT C7 H73 sing N N 154 DT C6 H6 sing N N 155 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6ISW 'double helix' 6ISW 'z-form double helix' 6ISW 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 22 1_555 A DG 16 1_555 1.925 -3.255 0.113 13.254 13.248 -87.779 1 A_DG22:DG16_A A 22 ? A 16 ? 6 3 1 A DG 21 1_555 A DG 15 1_555 1.789 -3.293 0.187 9.479 8.007 -93.310 2 A_DG21:DG15_A A 21 ? A 15 ? 6 3 1 A DG 2 1_555 A DG 20 1_555 1.679 -3.503 -0.074 0.011 2.091 -90.079 3 A_DG2:DG20_A A 2 ? A 20 ? 6 3 1 A DG 8 1_555 A DG 14 1_555 1.469 3.619 -0.199 7.141 -5.165 -92.182 4 A_DG8:DG14_A A 8 ? A 14 ? 6 3 1 A DG 9 1_555 A DG 3 1_555 -1.900 -3.435 0.070 -7.936 9.750 87.546 5 A_DG9:DG3_A A 9 ? A 3 ? 6 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 22 1_555 A DG 16 1_555 A DG 21 1_555 A DG 15 1_555 -0.935 0.482 3.312 -1.630 -2.702 25.785 1.826 1.625 3.296 -6.027 3.635 25.974 1 AA_DG22DG21:DG15DG16_AA A 22 ? A 16 ? A 21 ? A 15 ? 1 A DG 21 1_555 A DG 15 1_555 A DG 2 1_555 A DG 20 1_555 0.937 -2.074 3.158 5.185 -2.788 -60.578 2.174 1.160 2.987 2.756 5.126 -60.837 2 AA_DG21DG2:DG20DG15_AA A 21 ? A 15 ? A 2 ? A 20 ? 1 A DG 8 1_555 A DG 14 1_555 A DG 9 1_555 A DG 3 1_555 0.890 2.070 3.199 6.158 -1.029 -61.582 -1.967 1.143 3.137 1.002 5.998 -61.867 3 AA_DG8DG9:DG3DG14_AA A 8 ? A 14 ? A 9 ? A 3 ? # _pdbx_audit_support.funding_organization 'Wellcome Trust' _pdbx_audit_support.country India _pdbx_audit_support.grant_number IA/S/16/1/502360 _pdbx_audit_support.ordinal 1 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'POTASSIUM ION' _pdbx_entity_nonpoly.comp_id K # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1KF1 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #