data_6J4G # _entry.id 6J4G # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6J4G pdb_00006j4g 10.2210/pdb6j4g/pdb WWPDB D_1300010447 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6J4G _pdbx_database_status.recvd_initial_deposition_date 2019-01-08 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Xu, Y.P.' 1 ? 'Xu, H.' 2 ? 'Wang, B.' 3 ? 'Su, X.D.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal structure of the N-terminal DNA binding domain of AtWRKY33' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Xu, Y.P.' 1 ? primary 'Xu, H.' 2 ? primary 'Wang, B.' 3 ? primary 'Su, X.D.' 4 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 6J4G _cell.details ? _cell.formula_units_Z ? _cell.length_a 97.900 _cell.length_a_esd ? _cell.length_b 97.900 _cell.length_b_esd ? _cell.length_c 94.300 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6J4G _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Probable WRKY transcription factor 33' 8905.031 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*AP*GP*CP*CP*TP*TP*TP*GP*AP*CP*CP*AP*GP*CP*G)-3') ; 4569.973 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*TP*CP*GP*CP*TP*GP*GP*TP*CP*AP*AP*AP*GP*GP*C)-3') ; 4609.997 1 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'WRKY DNA-binding protein 33' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no MREQRKGEDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLEGQITEIVYKGSHNHPKPLEHHHHHH MREQRKGEDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLEGQITEIVYKGSHNHPKPLEHHHHHH B ? 2 polydeoxyribonucleotide no no '(DA)(DG)(DC)(DC)(DT)(DT)(DT)(DG)(DA)(DC)(DC)(DA)(DG)(DC)(DG)' AGCCTTTGACCAGCG C ? 3 polydeoxyribonucleotide no no '(DT)(DC)(DG)(DC)(DT)(DG)(DG)(DT)(DC)(DA)(DA)(DA)(DG)(DG)(DC)' TCGCTGGTCAAAGGC D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ARG n 1 3 GLU n 1 4 GLN n 1 5 ARG n 1 6 LYS n 1 7 GLY n 1 8 GLU n 1 9 ASP n 1 10 GLY n 1 11 TYR n 1 12 ASN n 1 13 TRP n 1 14 ARG n 1 15 LYS n 1 16 TYR n 1 17 GLY n 1 18 GLN n 1 19 LYS n 1 20 GLN n 1 21 VAL n 1 22 LYS n 1 23 GLY n 1 24 SER n 1 25 GLU n 1 26 ASN n 1 27 PRO n 1 28 ARG n 1 29 SER n 1 30 TYR n 1 31 TYR n 1 32 LYS n 1 33 CYS n 1 34 THR n 1 35 PHE n 1 36 PRO n 1 37 ASN n 1 38 CYS n 1 39 PRO n 1 40 THR n 1 41 LYS n 1 42 LYS n 1 43 LYS n 1 44 VAL n 1 45 GLU n 1 46 ARG n 1 47 SER n 1 48 LEU n 1 49 GLU n 1 50 GLY n 1 51 GLN n 1 52 ILE n 1 53 THR n 1 54 GLU n 1 55 ILE n 1 56 VAL n 1 57 TYR n 1 58 LYS n 1 59 GLY n 1 60 SER n 1 61 HIS n 1 62 ASN n 1 63 HIS n 1 64 PRO n 1 65 LYS n 1 66 PRO n 1 67 LEU n 1 68 GLU n 1 69 HIS n 1 70 HIS n 1 71 HIS n 1 72 HIS n 1 73 HIS n 1 74 HIS n 2 1 DA n 2 2 DG n 2 3 DC n 2 4 DC n 2 5 DT n 2 6 DT n 2 7 DT n 2 8 DG n 2 9 DA n 2 10 DC n 2 11 DC n 2 12 DA n 2 13 DG n 2 14 DC n 2 15 DG n 3 1 DT n 3 2 DC n 3 3 DG n 3 4 DC n 3 5 DT n 3 6 DG n 3 7 DG n 3 8 DT n 3 9 DC n 3 10 DA n 3 11 DA n 3 12 DA n 3 13 DG n 3 14 DG n 3 15 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 74 _entity_src_gen.gene_src_common_name 'Mouse-ear cress' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'WRKY33, At2g38470, T19C21.4' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Arabidopsis thaliana' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3702 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 15 'Arabidopsis thaliana' ? 3702 ? 3 1 sample 1 15 'Arabidopsis thaliana' ? 3702 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP WRK33_ARATH Q8S8P5 ? 1 REQRKGEDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLEGQITEIVYKGSHNHPKP 178 2 PDB 6J4G 6J4G ? 2 ? 1 3 PDB 6J4G 6J4G ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6J4G B 2 ? 66 ? Q8S8P5 178 ? 242 ? 178 242 2 2 6J4G C 1 ? 15 ? 6J4G 1 ? 15 ? 1 15 3 3 6J4G D 1 ? 15 ? 6J4G 1 ? 15 ? 1 15 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6J4G MET B 1 ? UNP Q8S8P5 ? ? 'initiating methionine' 177 1 1 6J4G LEU B 67 ? UNP Q8S8P5 ? ? 'expression tag' 243 2 1 6J4G GLU B 68 ? UNP Q8S8P5 ? ? 'expression tag' 244 3 1 6J4G HIS B 69 ? UNP Q8S8P5 ? ? 'expression tag' 245 4 1 6J4G HIS B 70 ? UNP Q8S8P5 ? ? 'expression tag' 246 5 1 6J4G HIS B 71 ? UNP Q8S8P5 ? ? 'expression tag' 247 6 1 6J4G HIS B 72 ? UNP Q8S8P5 ? ? 'expression tag' 248 7 1 6J4G HIS B 73 ? UNP Q8S8P5 ? ? 'expression tag' 249 8 1 6J4G HIS B 74 ? UNP Q8S8P5 ? ? 'expression tag' 250 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6J4G _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.61 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 65.90 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '8% v/v Ethylene glycol, 0.1M HEPES/Sodium hydroxide pH 7.5, 10% PEG 8000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-11-22 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.978 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL19U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.978 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL19U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate 82.13 _reflns.entry_id 6J4G _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.0 _reflns.d_resolution_low 29.474 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 5684 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.83 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 24.4 _reflns.pdbx_Rmerge_I_obs 0.175 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 13 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.179 _reflns.pdbx_Rpim_I_all 0.035 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 3 _reflns_shell.d_res_low 3.11 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 550 _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.8 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 24.1 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.47 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6J4G _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.000 _refine.ls_d_res_low 29.473 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 5670 _refine.ls_number_reflns_R_free 567 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.02 _refine.ls_percent_reflns_R_free 10.00 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2079 _refine.ls_R_factor_R_free 0.2461 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2036 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.37 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 2ayd _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 26.65 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.35 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 3.000 _refine_hist.d_res_low 29.473 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1089 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 479 _refine_hist.pdbx_number_atoms_nucleic_acid 609 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 ? 1175 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.168 ? 1711 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 24.339 ? 593 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.058 ? 180 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.010 ? 116 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 3.0002 3.3017 . . 135 1207 97.00 . . . 0.3317 . 0.2638 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.3017 3.7786 . . 139 1258 100.00 . . . 0.2372 . 0.2160 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.7786 4.7574 . . 140 1267 100.00 . . . 0.2558 . 0.1978 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.7574 29.4744 . . 153 1371 100.00 . . . 0.2289 . 0.1911 . . . . . . . . . . # _struct.entry_id 6J4G _struct.title 'Crystal structure of the AtWRKY33 domain' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6J4G _struct_keywords.text 'WRKY transcription factors N-terminal WRKY domain, DNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 33 SG ? ? ? 1_555 D ZN . ZN ? ? B CYS 209 B ZN 301 1_555 ? ? ? ? ? ? ? 2.235 ? ? metalc2 metalc ? ? A CYS 38 SG ? ? ? 1_555 D ZN . ZN ? ? B CYS 214 B ZN 301 1_555 ? ? ? ? ? ? ? 2.107 ? ? metalc3 metalc ? ? A HIS 61 ND1 ? ? ? 1_555 D ZN . ZN ? ? B HIS 237 B ZN 301 1_555 ? ? ? ? ? ? ? 2.007 ? ? metalc4 metalc ? ? A HIS 63 NE2 ? ? ? 1_555 D ZN . ZN ? ? B HIS 239 B ZN 301 1_555 ? ? ? ? ? ? ? 1.796 ? ? hydrog1 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 15 N3 ? ? C DG 2 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 15 O2 ? ? C DG 2 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 15 N4 ? ? C DG 2 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 3 N3 ? ? ? 1_555 C DG 14 N1 ? ? C DC 3 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 3 N4 ? ? ? 1_555 C DG 14 O6 ? ? C DC 3 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 3 O2 ? ? ? 1_555 C DG 14 N2 ? ? C DC 3 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DC 4 N3 ? ? ? 1_555 C DG 13 N1 ? ? C DC 4 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 4 N4 ? ? ? 1_555 C DG 13 O6 ? ? C DC 4 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DC 4 O2 ? ? ? 1_555 C DG 13 N2 ? ? C DC 4 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DT 5 N3 ? ? ? 1_555 C DA 12 N1 ? ? C DT 5 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DT 5 O4 ? ? ? 1_555 C DA 12 N6 ? ? C DT 5 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DT 6 N3 ? ? ? 1_555 C DA 11 N1 ? ? C DT 6 D DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DT 6 O4 ? ? ? 1_555 C DA 11 N6 ? ? C DT 6 D DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DT 7 N3 ? ? ? 1_555 C DA 10 N1 ? ? C DT 7 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DT 7 O4 ? ? ? 1_555 C DA 10 N6 ? ? C DT 7 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DG 8 N1 ? ? ? 1_555 C DC 9 N3 ? ? C DG 8 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DG 8 N2 ? ? ? 1_555 C DC 9 O2 ? ? C DG 8 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DG 8 O6 ? ? ? 1_555 C DC 9 N4 ? ? C DG 8 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DA 9 N1 ? ? ? 1_555 C DT 8 N3 ? ? C DA 9 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DA 9 N6 ? ? ? 1_555 C DT 8 O4 ? ? C DA 9 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DC 10 N3 ? ? ? 1_555 C DG 7 N1 ? ? C DC 10 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DC 10 N4 ? ? ? 1_555 C DG 7 O6 ? ? C DC 10 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DC 10 O2 ? ? ? 1_555 C DG 7 N2 ? ? C DC 10 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DC 11 N3 ? ? ? 1_555 C DG 6 N1 ? ? C DC 11 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DC 11 N4 ? ? ? 1_555 C DG 6 O6 ? ? C DC 11 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DC 11 O2 ? ? ? 1_555 C DG 6 N2 ? ? C DC 11 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DA 12 N1 ? ? ? 1_555 C DT 5 N3 ? ? C DA 12 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DA 12 N6 ? ? ? 1_555 C DT 5 O4 ? ? C DA 12 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DG 13 N1 ? ? ? 1_555 C DC 4 N3 ? ? C DG 13 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DG 13 N2 ? ? ? 1_555 C DC 4 O2 ? ? C DG 13 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DG 13 O6 ? ? ? 1_555 C DC 4 N4 ? ? C DG 13 D DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DC 14 N3 ? ? ? 1_555 C DG 3 N1 ? ? C DC 14 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DC 14 N4 ? ? ? 1_555 C DG 3 O6 ? ? C DC 14 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DC 14 O2 ? ? ? 1_555 C DG 3 N2 ? ? C DC 14 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DG 15 N1 ? ? ? 1_555 C DC 2 N3 ? ? C DG 15 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DG 15 N2 ? ? ? 1_555 C DC 2 O2 ? ? C DG 15 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B DG 15 O6 ? ? ? 1_555 C DC 2 N4 ? ? C DG 15 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TRP A 13 ? LYS A 19 ? TRP B 189 LYS B 195 AA1 2 ARG A 28 ? CYS A 33 ? ARG B 204 CYS B 209 AA1 3 LYS A 41 ? ARG A 46 ? LYS B 217 ARG B 222 AA1 4 ILE A 52 ? LYS A 58 ? ILE B 228 LYS B 234 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LYS A 19 ? N LYS B 195 O ARG A 28 ? O ARG B 204 AA1 2 3 N TYR A 31 ? N TYR B 207 O LYS A 42 ? O LYS B 218 AA1 3 4 N LYS A 41 ? N LYS B 217 O LYS A 58 ? O LYS B 234 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id B _struct_site.pdbx_auth_comp_id ZN _struct_site.pdbx_auth_seq_id 301 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'binding site for residue ZN B 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 33 ? CYS B 209 . ? 1_555 ? 2 AC1 4 CYS A 38 ? CYS B 214 . ? 1_555 ? 3 AC1 4 HIS A 61 ? HIS B 237 . ? 1_555 ? 4 AC1 4 HIS A 63 ? HIS B 239 . ? 1_555 ? # _atom_sites.entry_id 6J4G _atom_sites.fract_transf_matrix[1][1] 0.010215 _atom_sites.fract_transf_matrix[1][2] 0.005897 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011795 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010604 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 177 ? ? ? B . n A 1 2 ARG 2 178 ? ? ? B . n A 1 3 GLU 3 179 ? ? ? B . n A 1 4 GLN 4 180 ? ? ? B . n A 1 5 ARG 5 181 ? ? ? B . n A 1 6 LYS 6 182 ? ? ? B . n A 1 7 GLY 7 183 ? ? ? B . n A 1 8 GLU 8 184 ? ? ? B . n A 1 9 ASP 9 185 185 ASP ASP B . n A 1 10 GLY 10 186 186 GLY GLY B . n A 1 11 TYR 11 187 187 TYR TYR B . n A 1 12 ASN 12 188 188 ASN ASN B . n A 1 13 TRP 13 189 189 TRP TRP B . n A 1 14 ARG 14 190 190 ARG ARG B . n A 1 15 LYS 15 191 191 LYS LYS B . n A 1 16 TYR 16 192 192 TYR TYR B . n A 1 17 GLY 17 193 193 GLY GLY B . n A 1 18 GLN 18 194 194 GLN GLN B . n A 1 19 LYS 19 195 195 LYS LYS B . n A 1 20 GLN 20 196 196 GLN GLN B . n A 1 21 VAL 21 197 197 VAL VAL B . n A 1 22 LYS 22 198 198 LYS LYS B . n A 1 23 GLY 23 199 199 GLY GLY B . n A 1 24 SER 24 200 200 SER SER B . n A 1 25 GLU 25 201 201 GLU GLU B . n A 1 26 ASN 26 202 202 ASN ASN B . n A 1 27 PRO 27 203 203 PRO PRO B . n A 1 28 ARG 28 204 204 ARG ARG B . n A 1 29 SER 29 205 205 SER SER B . n A 1 30 TYR 30 206 206 TYR TYR B . n A 1 31 TYR 31 207 207 TYR TYR B . n A 1 32 LYS 32 208 208 LYS LYS B . n A 1 33 CYS 33 209 209 CYS CYS B . n A 1 34 THR 34 210 210 THR THR B . n A 1 35 PHE 35 211 211 PHE PHE B . n A 1 36 PRO 36 212 212 PRO PRO B . n A 1 37 ASN 37 213 213 ASN ASN B . n A 1 38 CYS 38 214 214 CYS CYS B . n A 1 39 PRO 39 215 215 PRO PRO B . n A 1 40 THR 40 216 216 THR THR B . n A 1 41 LYS 41 217 217 LYS LYS B . n A 1 42 LYS 42 218 218 LYS LYS B . n A 1 43 LYS 43 219 219 LYS LYS B . n A 1 44 VAL 44 220 220 VAL VAL B . n A 1 45 GLU 45 221 221 GLU GLU B . n A 1 46 ARG 46 222 222 ARG ARG B . n A 1 47 SER 47 223 223 SER SER B . n A 1 48 LEU 48 224 224 LEU LEU B . n A 1 49 GLU 49 225 225 GLU GLU B . n A 1 50 GLY 50 226 226 GLY GLY B . n A 1 51 GLN 51 227 227 GLN GLN B . n A 1 52 ILE 52 228 228 ILE ILE B . n A 1 53 THR 53 229 229 THR THR B . n A 1 54 GLU 54 230 230 GLU GLU B . n A 1 55 ILE 55 231 231 ILE ILE B . n A 1 56 VAL 56 232 232 VAL VAL B . n A 1 57 TYR 57 233 233 TYR TYR B . n A 1 58 LYS 58 234 234 LYS LYS B . n A 1 59 GLY 59 235 235 GLY GLY B . n A 1 60 SER 60 236 236 SER SER B . n A 1 61 HIS 61 237 237 HIS HIS B . n A 1 62 ASN 62 238 238 ASN ASN B . n A 1 63 HIS 63 239 239 HIS HIS B . n A 1 64 PRO 64 240 240 PRO PRO B . n A 1 65 LYS 65 241 241 LYS LYS B . n A 1 66 PRO 66 242 242 PRO PRO B . n A 1 67 LEU 67 243 ? ? ? B . n A 1 68 GLU 68 244 ? ? ? B . n A 1 69 HIS 69 245 ? ? ? B . n A 1 70 HIS 70 246 ? ? ? B . n A 1 71 HIS 71 247 ? ? ? B . n A 1 72 HIS 72 248 ? ? ? B . n A 1 73 HIS 73 249 ? ? ? B . n A 1 74 HIS 74 250 ? ? ? B . n B 2 1 DA 1 1 1 DA DA C . n B 2 2 DG 2 2 2 DG DG C . n B 2 3 DC 3 3 3 DC DC C . n B 2 4 DC 4 4 4 DC DC C . n B 2 5 DT 5 5 5 DT DT C . n B 2 6 DT 6 6 6 DT DT C . n B 2 7 DT 7 7 7 DT DT C . n B 2 8 DG 8 8 8 DG DG C . n B 2 9 DA 9 9 9 DA DA C . n B 2 10 DC 10 10 10 DC DC C . n B 2 11 DC 11 11 11 DC DC C . n B 2 12 DA 12 12 12 DA DA C . n B 2 13 DG 13 13 13 DG DG C . n B 2 14 DC 14 14 14 DC DC C . n B 2 15 DG 15 15 15 DG DG C . n C 3 1 DT 1 1 1 DT DT D . n C 3 2 DC 2 2 2 DC DC D . n C 3 3 DG 3 3 3 DG DG D . n C 3 4 DC 4 4 4 DC DC D . n C 3 5 DT 5 5 5 DT DT D . n C 3 6 DG 6 6 6 DG DG D . n C 3 7 DG 7 7 7 DG DG D . n C 3 8 DT 8 8 8 DT DT D . n C 3 9 DC 9 9 9 DC DC D . n C 3 10 DA 10 10 10 DA DA D . n C 3 11 DA 11 11 11 DA DA D . n C 3 12 DA 12 12 12 DA DA D . n C 3 13 DG 13 13 13 DG DG D . n C 3 14 DG 14 14 14 DG DG D . n C 3 15 DC 15 15 15 DC DC D . n # _pdbx_nonpoly_scheme.asym_id D _pdbx_nonpoly_scheme.entity_id 4 _pdbx_nonpoly_scheme.mon_id ZN _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 301 _pdbx_nonpoly_scheme.auth_seq_num 301 _pdbx_nonpoly_scheme.pdb_mon_id ZN _pdbx_nonpoly_scheme.auth_mon_id ZN _pdbx_nonpoly_scheme.pdb_strand_id B _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2590 ? 1 MORE -23 ? 1 'SSA (A^2)' 8680 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 33 ? B CYS 209 ? 1_555 ZN ? D ZN . ? B ZN 301 ? 1_555 SG ? A CYS 38 ? B CYS 214 ? 1_555 108.2 ? 2 SG ? A CYS 33 ? B CYS 209 ? 1_555 ZN ? D ZN . ? B ZN 301 ? 1_555 ND1 ? A HIS 61 ? B HIS 237 ? 1_555 109.9 ? 3 SG ? A CYS 38 ? B CYS 214 ? 1_555 ZN ? D ZN . ? B ZN 301 ? 1_555 ND1 ? A HIS 61 ? B HIS 237 ? 1_555 111.6 ? 4 SG ? A CYS 33 ? B CYS 209 ? 1_555 ZN ? D ZN . ? B ZN 301 ? 1_555 NE2 ? A HIS 63 ? B HIS 239 ? 1_555 114.8 ? 5 SG ? A CYS 38 ? B CYS 214 ? 1_555 ZN ? D ZN . ? B ZN 301 ? 1_555 NE2 ? A HIS 63 ? B HIS 239 ? 1_555 100.6 ? 6 ND1 ? A HIS 61 ? B HIS 237 ? 1_555 ZN ? D ZN . ? B ZN 301 ? 1_555 NE2 ? A HIS 63 ? B HIS 239 ? 1_555 111.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-01-15 2 'Structure model' 1 1 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" C DG 13 ? ? "C3'" C DG 13 ? ? 1.383 1.419 -0.036 0.006 N 2 1 "O3'" D DG 6 ? ? P D DG 7 ? ? 1.510 1.607 -0.097 0.012 Y 3 1 "O3'" D DG 7 ? ? P D DT 8 ? ? 1.519 1.607 -0.088 0.012 Y 4 1 "O3'" D DT 8 ? ? "C3'" D DT 8 ? ? 1.381 1.419 -0.038 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DA 12 ? ? "C1'" C DA 12 ? ? N9 C DA 12 ? ? 110.38 108.30 2.08 0.30 N 2 1 "C3'" D DA 10 ? ? "C2'" D DA 10 ? ? "C1'" D DA 10 ? ? 97.58 102.40 -4.82 0.80 N 3 1 "O4'" D DA 10 ? ? "C1'" D DA 10 ? ? N9 D DA 10 ? ? 110.73 108.30 2.43 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU B 201 ? ? -55.61 -71.76 2 1 ASN B 202 ? ? -35.53 129.54 3 1 ASN B 213 ? ? 68.00 -11.87 4 1 ASN B 238 ? ? -80.66 40.35 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B MET 177 ? A MET 1 2 1 Y 1 B ARG 178 ? A ARG 2 3 1 Y 1 B GLU 179 ? A GLU 3 4 1 Y 1 B GLN 180 ? A GLN 4 5 1 Y 1 B ARG 181 ? A ARG 5 6 1 Y 1 B LYS 182 ? A LYS 6 7 1 Y 1 B GLY 183 ? A GLY 7 8 1 Y 1 B GLU 184 ? A GLU 8 9 1 Y 1 B LEU 243 ? A LEU 67 10 1 Y 1 B GLU 244 ? A GLU 68 11 1 Y 1 B HIS 245 ? A HIS 69 12 1 Y 1 B HIS 246 ? A HIS 70 13 1 Y 1 B HIS 247 ? A HIS 71 14 1 Y 1 B HIS 248 ? A HIS 72 15 1 Y 1 B HIS 249 ? A HIS 73 16 1 Y 1 B HIS 250 ? A HIS 74 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ARG N N N N 1 ARG CA C N S 2 ARG C C N N 3 ARG O O N N 4 ARG CB C N N 5 ARG CG C N N 6 ARG CD C N N 7 ARG NE N N N 8 ARG CZ C N N 9 ARG NH1 N N N 10 ARG NH2 N N N 11 ARG OXT O N N 12 ARG H H N N 13 ARG H2 H N N 14 ARG HA H N N 15 ARG HB2 H N N 16 ARG HB3 H N N 17 ARG HG2 H N N 18 ARG HG3 H N N 19 ARG HD2 H N N 20 ARG HD3 H N N 21 ARG HE H N N 22 ARG HH11 H N N 23 ARG HH12 H N N 24 ARG HH21 H N N 25 ARG HH22 H N N 26 ARG HXT H N N 27 ASN N N N N 28 ASN CA C N S 29 ASN C C N N 30 ASN O O N N 31 ASN CB C N N 32 ASN CG C N N 33 ASN OD1 O N N 34 ASN ND2 N N N 35 ASN OXT O N N 36 ASN H H N N 37 ASN H2 H N N 38 ASN HA H N N 39 ASN HB2 H N N 40 ASN HB3 H N N 41 ASN HD21 H N N 42 ASN HD22 H N N 43 ASN HXT H N N 44 ASP N N N N 45 ASP CA C N S 46 ASP C C N N 47 ASP O O N N 48 ASP CB C N N 49 ASP CG C N N 50 ASP OD1 O N N 51 ASP OD2 O N N 52 ASP OXT O N N 53 ASP H H N N 54 ASP H2 H N N 55 ASP HA H N N 56 ASP HB2 H N N 57 ASP HB3 H N N 58 ASP HD2 H N N 59 ASP HXT H N N 60 CYS N N N N 61 CYS CA C N R 62 CYS C C N N 63 CYS O O N N 64 CYS CB C N N 65 CYS SG S N N 66 CYS OXT O N N 67 CYS H H N N 68 CYS H2 H N N 69 CYS HA H N N 70 CYS HB2 H N N 71 CYS HB3 H N N 72 CYS HG H N N 73 CYS HXT H N N 74 DA OP3 O N N 75 DA P P N N 76 DA OP1 O N N 77 DA OP2 O N N 78 DA "O5'" O N N 79 DA "C5'" C N N 80 DA "C4'" C N R 81 DA "O4'" O N N 82 DA "C3'" C N S 83 DA "O3'" O N N 84 DA "C2'" C N N 85 DA "C1'" C N R 86 DA N9 N Y N 87 DA C8 C Y N 88 DA N7 N Y N 89 DA C5 C Y N 90 DA C6 C Y N 91 DA N6 N N N 92 DA N1 N Y N 93 DA C2 C Y N 94 DA N3 N Y N 95 DA C4 C Y N 96 DA HOP3 H N N 97 DA HOP2 H N N 98 DA "H5'" H N N 99 DA "H5''" H N N 100 DA "H4'" H N N 101 DA "H3'" H N N 102 DA "HO3'" H N N 103 DA "H2'" H N N 104 DA "H2''" H N N 105 DA "H1'" H N N 106 DA H8 H N N 107 DA H61 H N N 108 DA H62 H N N 109 DA H2 H N N 110 DC OP3 O N N 111 DC P P N N 112 DC OP1 O N N 113 DC OP2 O N N 114 DC "O5'" O N N 115 DC "C5'" C N N 116 DC "C4'" C N R 117 DC "O4'" O N N 118 DC "C3'" C N S 119 DC "O3'" O N N 120 DC "C2'" C N N 121 DC "C1'" C N R 122 DC N1 N N N 123 DC C2 C N N 124 DC O2 O N N 125 DC N3 N N N 126 DC C4 C N N 127 DC N4 N N N 128 DC C5 C N N 129 DC C6 C N N 130 DC HOP3 H N N 131 DC HOP2 H N N 132 DC "H5'" H N N 133 DC "H5''" H N N 134 DC "H4'" H N N 135 DC "H3'" H N N 136 DC "HO3'" H N N 137 DC "H2'" H N N 138 DC "H2''" H N N 139 DC "H1'" H N N 140 DC H41 H N N 141 DC H42 H N N 142 DC H5 H N N 143 DC H6 H N N 144 DG OP3 O N N 145 DG P P N N 146 DG OP1 O N N 147 DG OP2 O N N 148 DG "O5'" O N N 149 DG "C5'" C N N 150 DG "C4'" C N R 151 DG "O4'" O N N 152 DG "C3'" C N S 153 DG "O3'" O N N 154 DG "C2'" C N N 155 DG "C1'" C N R 156 DG N9 N Y N 157 DG C8 C Y N 158 DG N7 N Y N 159 DG C5 C Y N 160 DG C6 C N N 161 DG O6 O N N 162 DG N1 N N N 163 DG C2 C N N 164 DG N2 N N N 165 DG N3 N N N 166 DG C4 C Y N 167 DG HOP3 H N N 168 DG HOP2 H N N 169 DG "H5'" H N N 170 DG "H5''" H N N 171 DG "H4'" H N N 172 DG "H3'" H N N 173 DG "HO3'" H N N 174 DG "H2'" H N N 175 DG "H2''" H N N 176 DG "H1'" H N N 177 DG H8 H N N 178 DG H1 H N N 179 DG H21 H N N 180 DG H22 H N N 181 DT OP3 O N N 182 DT P P N N 183 DT OP1 O N N 184 DT OP2 O N N 185 DT "O5'" O N N 186 DT "C5'" C N N 187 DT "C4'" C N R 188 DT "O4'" O N N 189 DT "C3'" C N S 190 DT "O3'" O N N 191 DT "C2'" C N N 192 DT "C1'" C N R 193 DT N1 N N N 194 DT C2 C N N 195 DT O2 O N N 196 DT N3 N N N 197 DT C4 C N N 198 DT O4 O N N 199 DT C5 C N N 200 DT C7 C N N 201 DT C6 C N N 202 DT HOP3 H N N 203 DT HOP2 H N N 204 DT "H5'" H N N 205 DT "H5''" H N N 206 DT "H4'" H N N 207 DT "H3'" H N N 208 DT "HO3'" H N N 209 DT "H2'" H N N 210 DT "H2''" H N N 211 DT "H1'" H N N 212 DT H3 H N N 213 DT H71 H N N 214 DT H72 H N N 215 DT H73 H N N 216 DT H6 H N N 217 GLN N N N N 218 GLN CA C N S 219 GLN C C N N 220 GLN O O N N 221 GLN CB C N N 222 GLN CG C N N 223 GLN CD C N N 224 GLN OE1 O N N 225 GLN NE2 N N N 226 GLN OXT O N N 227 GLN H H N N 228 GLN H2 H N N 229 GLN HA H N N 230 GLN HB2 H N N 231 GLN HB3 H N N 232 GLN HG2 H N N 233 GLN HG3 H N N 234 GLN HE21 H N N 235 GLN HE22 H N N 236 GLN HXT H N N 237 GLU N N N N 238 GLU CA C N S 239 GLU C C N N 240 GLU O O N N 241 GLU CB C N N 242 GLU CG C N N 243 GLU CD C N N 244 GLU OE1 O N N 245 GLU OE2 O N N 246 GLU OXT O N N 247 GLU H H N N 248 GLU H2 H N N 249 GLU HA H N N 250 GLU HB2 H N N 251 GLU HB3 H N N 252 GLU HG2 H N N 253 GLU HG3 H N N 254 GLU HE2 H N N 255 GLU HXT H N N 256 GLY N N N N 257 GLY CA C N N 258 GLY C C N N 259 GLY O O N N 260 GLY OXT O N N 261 GLY H H N N 262 GLY H2 H N N 263 GLY HA2 H N N 264 GLY HA3 H N N 265 GLY HXT H N N 266 HIS N N N N 267 HIS CA C N S 268 HIS C C N N 269 HIS O O N N 270 HIS CB C N N 271 HIS CG C Y N 272 HIS ND1 N Y N 273 HIS CD2 C Y N 274 HIS CE1 C Y N 275 HIS NE2 N Y N 276 HIS OXT O N N 277 HIS H H N N 278 HIS H2 H N N 279 HIS HA H N N 280 HIS HB2 H N N 281 HIS HB3 H N N 282 HIS HD1 H N N 283 HIS HD2 H N N 284 HIS HE1 H N N 285 HIS HE2 H N N 286 HIS HXT H N N 287 ILE N N N N 288 ILE CA C N S 289 ILE C C N N 290 ILE O O N N 291 ILE CB C N S 292 ILE CG1 C N N 293 ILE CG2 C N N 294 ILE CD1 C N N 295 ILE OXT O N N 296 ILE H H N N 297 ILE H2 H N N 298 ILE HA H N N 299 ILE HB H N N 300 ILE HG12 H N N 301 ILE HG13 H N N 302 ILE HG21 H N N 303 ILE HG22 H N N 304 ILE HG23 H N N 305 ILE HD11 H N N 306 ILE HD12 H N N 307 ILE HD13 H N N 308 ILE HXT H N N 309 LEU N N N N 310 LEU CA C N S 311 LEU C C N N 312 LEU O O N N 313 LEU CB C N N 314 LEU CG C N N 315 LEU CD1 C N N 316 LEU CD2 C N N 317 LEU OXT O N N 318 LEU H H N N 319 LEU H2 H N N 320 LEU HA H N N 321 LEU HB2 H N N 322 LEU HB3 H N N 323 LEU HG H N N 324 LEU HD11 H N N 325 LEU HD12 H N N 326 LEU HD13 H N N 327 LEU HD21 H N N 328 LEU HD22 H N N 329 LEU HD23 H N N 330 LEU HXT H N N 331 LYS N N N N 332 LYS CA C N S 333 LYS C C N N 334 LYS O O N N 335 LYS CB C N N 336 LYS CG C N N 337 LYS CD C N N 338 LYS CE C N N 339 LYS NZ N N N 340 LYS OXT O N N 341 LYS H H N N 342 LYS H2 H N N 343 LYS HA H N N 344 LYS HB2 H N N 345 LYS HB3 H N N 346 LYS HG2 H N N 347 LYS HG3 H N N 348 LYS HD2 H N N 349 LYS HD3 H N N 350 LYS HE2 H N N 351 LYS HE3 H N N 352 LYS HZ1 H N N 353 LYS HZ2 H N N 354 LYS HZ3 H N N 355 LYS HXT H N N 356 MET N N N N 357 MET CA C N S 358 MET C C N N 359 MET O O N N 360 MET CB C N N 361 MET CG C N N 362 MET SD S N N 363 MET CE C N N 364 MET OXT O N N 365 MET H H N N 366 MET H2 H N N 367 MET HA H N N 368 MET HB2 H N N 369 MET HB3 H N N 370 MET HG2 H N N 371 MET HG3 H N N 372 MET HE1 H N N 373 MET HE2 H N N 374 MET HE3 H N N 375 MET HXT H N N 376 PHE N N N N 377 PHE CA C N S 378 PHE C C N N 379 PHE O O N N 380 PHE CB C N N 381 PHE CG C Y N 382 PHE CD1 C Y N 383 PHE CD2 C Y N 384 PHE CE1 C Y N 385 PHE CE2 C Y N 386 PHE CZ C Y N 387 PHE OXT O N N 388 PHE H H N N 389 PHE H2 H N N 390 PHE HA H N N 391 PHE HB2 H N N 392 PHE HB3 H N N 393 PHE HD1 H N N 394 PHE HD2 H N N 395 PHE HE1 H N N 396 PHE HE2 H N N 397 PHE HZ H N N 398 PHE HXT H N N 399 PRO N N N N 400 PRO CA C N S 401 PRO C C N N 402 PRO O O N N 403 PRO CB C N N 404 PRO CG C N N 405 PRO CD C N N 406 PRO OXT O N N 407 PRO H H N N 408 PRO HA H N N 409 PRO HB2 H N N 410 PRO HB3 H N N 411 PRO HG2 H N N 412 PRO HG3 H N N 413 PRO HD2 H N N 414 PRO HD3 H N N 415 PRO HXT H N N 416 SER N N N N 417 SER CA C N S 418 SER C C N N 419 SER O O N N 420 SER CB C N N 421 SER OG O N N 422 SER OXT O N N 423 SER H H N N 424 SER H2 H N N 425 SER HA H N N 426 SER HB2 H N N 427 SER HB3 H N N 428 SER HG H N N 429 SER HXT H N N 430 THR N N N N 431 THR CA C N S 432 THR C C N N 433 THR O O N N 434 THR CB C N R 435 THR OG1 O N N 436 THR CG2 C N N 437 THR OXT O N N 438 THR H H N N 439 THR H2 H N N 440 THR HA H N N 441 THR HB H N N 442 THR HG1 H N N 443 THR HG21 H N N 444 THR HG22 H N N 445 THR HG23 H N N 446 THR HXT H N N 447 TRP N N N N 448 TRP CA C N S 449 TRP C C N N 450 TRP O O N N 451 TRP CB C N N 452 TRP CG C Y N 453 TRP CD1 C Y N 454 TRP CD2 C Y N 455 TRP NE1 N Y N 456 TRP CE2 C Y N 457 TRP CE3 C Y N 458 TRP CZ2 C Y N 459 TRP CZ3 C Y N 460 TRP CH2 C Y N 461 TRP OXT O N N 462 TRP H H N N 463 TRP H2 H N N 464 TRP HA H N N 465 TRP HB2 H N N 466 TRP HB3 H N N 467 TRP HD1 H N N 468 TRP HE1 H N N 469 TRP HE3 H N N 470 TRP HZ2 H N N 471 TRP HZ3 H N N 472 TRP HH2 H N N 473 TRP HXT H N N 474 TYR N N N N 475 TYR CA C N S 476 TYR C C N N 477 TYR O O N N 478 TYR CB C N N 479 TYR CG C Y N 480 TYR CD1 C Y N 481 TYR CD2 C Y N 482 TYR CE1 C Y N 483 TYR CE2 C Y N 484 TYR CZ C Y N 485 TYR OH O N N 486 TYR OXT O N N 487 TYR H H N N 488 TYR H2 H N N 489 TYR HA H N N 490 TYR HB2 H N N 491 TYR HB3 H N N 492 TYR HD1 H N N 493 TYR HD2 H N N 494 TYR HE1 H N N 495 TYR HE2 H N N 496 TYR HH H N N 497 TYR HXT H N N 498 VAL N N N N 499 VAL CA C N S 500 VAL C C N N 501 VAL O O N N 502 VAL CB C N N 503 VAL CG1 C N N 504 VAL CG2 C N N 505 VAL OXT O N N 506 VAL H H N N 507 VAL H2 H N N 508 VAL HA H N N 509 VAL HB H N N 510 VAL HG11 H N N 511 VAL HG12 H N N 512 VAL HG13 H N N 513 VAL HG21 H N N 514 VAL HG22 H N N 515 VAL HG23 H N N 516 VAL HXT H N N 517 ZN ZN ZN N N 518 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ARG N CA sing N N 1 ARG N H sing N N 2 ARG N H2 sing N N 3 ARG CA C sing N N 4 ARG CA CB sing N N 5 ARG CA HA sing N N 6 ARG C O doub N N 7 ARG C OXT sing N N 8 ARG CB CG sing N N 9 ARG CB HB2 sing N N 10 ARG CB HB3 sing N N 11 ARG CG CD sing N N 12 ARG CG HG2 sing N N 13 ARG CG HG3 sing N N 14 ARG CD NE sing N N 15 ARG CD HD2 sing N N 16 ARG CD HD3 sing N N 17 ARG NE CZ sing N N 18 ARG NE HE sing N N 19 ARG CZ NH1 sing N N 20 ARG CZ NH2 doub N N 21 ARG NH1 HH11 sing N N 22 ARG NH1 HH12 sing N N 23 ARG NH2 HH21 sing N N 24 ARG NH2 HH22 sing N N 25 ARG OXT HXT sing N N 26 ASN N CA sing N N 27 ASN N H sing N N 28 ASN N H2 sing N N 29 ASN CA C sing N N 30 ASN CA CB sing N N 31 ASN CA HA sing N N 32 ASN C O doub N N 33 ASN C OXT sing N N 34 ASN CB CG sing N N 35 ASN CB HB2 sing N N 36 ASN CB HB3 sing N N 37 ASN CG OD1 doub N N 38 ASN CG ND2 sing N N 39 ASN ND2 HD21 sing N N 40 ASN ND2 HD22 sing N N 41 ASN OXT HXT sing N N 42 ASP N CA sing N N 43 ASP N H sing N N 44 ASP N H2 sing N N 45 ASP CA C sing N N 46 ASP CA CB sing N N 47 ASP CA HA sing N N 48 ASP C O doub N N 49 ASP C OXT sing N N 50 ASP CB CG sing N N 51 ASP CB HB2 sing N N 52 ASP CB HB3 sing N N 53 ASP CG OD1 doub N N 54 ASP CG OD2 sing N N 55 ASP OD2 HD2 sing N N 56 ASP OXT HXT sing N N 57 CYS N CA sing N N 58 CYS N H sing N N 59 CYS N H2 sing N N 60 CYS CA C sing N N 61 CYS CA CB sing N N 62 CYS CA HA sing N N 63 CYS C O doub N N 64 CYS C OXT sing N N 65 CYS CB SG sing N N 66 CYS CB HB2 sing N N 67 CYS CB HB3 sing N N 68 CYS SG HG sing N N 69 CYS OXT HXT sing N N 70 DA OP3 P sing N N 71 DA OP3 HOP3 sing N N 72 DA P OP1 doub N N 73 DA P OP2 sing N N 74 DA P "O5'" sing N N 75 DA OP2 HOP2 sing N N 76 DA "O5'" "C5'" sing N N 77 DA "C5'" "C4'" sing N N 78 DA "C5'" "H5'" sing N N 79 DA "C5'" "H5''" sing N N 80 DA "C4'" "O4'" sing N N 81 DA "C4'" "C3'" sing N N 82 DA "C4'" "H4'" sing N N 83 DA "O4'" "C1'" sing N N 84 DA "C3'" "O3'" sing N N 85 DA "C3'" "C2'" sing N N 86 DA "C3'" "H3'" sing N N 87 DA "O3'" "HO3'" sing N N 88 DA "C2'" "C1'" sing N N 89 DA "C2'" "H2'" sing N N 90 DA "C2'" "H2''" sing N N 91 DA "C1'" N9 sing N N 92 DA "C1'" "H1'" sing N N 93 DA N9 C8 sing Y N 94 DA N9 C4 sing Y N 95 DA C8 N7 doub Y N 96 DA C8 H8 sing N N 97 DA N7 C5 sing Y N 98 DA C5 C6 sing Y N 99 DA C5 C4 doub Y N 100 DA C6 N6 sing N N 101 DA C6 N1 doub Y N 102 DA N6 H61 sing N N 103 DA N6 H62 sing N N 104 DA N1 C2 sing Y N 105 DA C2 N3 doub Y N 106 DA C2 H2 sing N N 107 DA N3 C4 sing Y N 108 DC OP3 P sing N N 109 DC OP3 HOP3 sing N N 110 DC P OP1 doub N N 111 DC P OP2 sing N N 112 DC P "O5'" sing N N 113 DC OP2 HOP2 sing N N 114 DC "O5'" "C5'" sing N N 115 DC "C5'" "C4'" sing N N 116 DC "C5'" "H5'" sing N N 117 DC "C5'" "H5''" sing N N 118 DC "C4'" "O4'" sing N N 119 DC "C4'" "C3'" sing N N 120 DC "C4'" "H4'" sing N N 121 DC "O4'" "C1'" sing N N 122 DC "C3'" "O3'" sing N N 123 DC "C3'" "C2'" sing N N 124 DC "C3'" "H3'" sing N N 125 DC "O3'" "HO3'" sing N N 126 DC "C2'" "C1'" sing N N 127 DC "C2'" "H2'" sing N N 128 DC "C2'" "H2''" sing N N 129 DC "C1'" N1 sing N N 130 DC "C1'" "H1'" sing N N 131 DC N1 C2 sing N N 132 DC N1 C6 sing N N 133 DC C2 O2 doub N N 134 DC C2 N3 sing N N 135 DC N3 C4 doub N N 136 DC C4 N4 sing N N 137 DC C4 C5 sing N N 138 DC N4 H41 sing N N 139 DC N4 H42 sing N N 140 DC C5 C6 doub N N 141 DC C5 H5 sing N N 142 DC C6 H6 sing N N 143 DG OP3 P sing N N 144 DG OP3 HOP3 sing N N 145 DG P OP1 doub N N 146 DG P OP2 sing N N 147 DG P "O5'" sing N N 148 DG OP2 HOP2 sing N N 149 DG "O5'" "C5'" sing N N 150 DG "C5'" "C4'" sing N N 151 DG "C5'" "H5'" sing N N 152 DG "C5'" "H5''" sing N N 153 DG "C4'" "O4'" sing N N 154 DG "C4'" "C3'" sing N N 155 DG "C4'" "H4'" sing N N 156 DG "O4'" "C1'" sing N N 157 DG "C3'" "O3'" sing N N 158 DG "C3'" "C2'" sing N N 159 DG "C3'" "H3'" sing N N 160 DG "O3'" "HO3'" sing N N 161 DG "C2'" "C1'" sing N N 162 DG "C2'" "H2'" sing N N 163 DG "C2'" "H2''" sing N N 164 DG "C1'" N9 sing N N 165 DG "C1'" "H1'" sing N N 166 DG N9 C8 sing Y N 167 DG N9 C4 sing Y N 168 DG C8 N7 doub Y N 169 DG C8 H8 sing N N 170 DG N7 C5 sing Y N 171 DG C5 C6 sing N N 172 DG C5 C4 doub Y N 173 DG C6 O6 doub N N 174 DG C6 N1 sing N N 175 DG N1 C2 sing N N 176 DG N1 H1 sing N N 177 DG C2 N2 sing N N 178 DG C2 N3 doub N N 179 DG N2 H21 sing N N 180 DG N2 H22 sing N N 181 DG N3 C4 sing N N 182 DT OP3 P sing N N 183 DT OP3 HOP3 sing N N 184 DT P OP1 doub N N 185 DT P OP2 sing N N 186 DT P "O5'" sing N N 187 DT OP2 HOP2 sing N N 188 DT "O5'" "C5'" sing N N 189 DT "C5'" "C4'" sing N N 190 DT "C5'" "H5'" sing N N 191 DT "C5'" "H5''" sing N N 192 DT "C4'" "O4'" sing N N 193 DT "C4'" "C3'" sing N N 194 DT "C4'" "H4'" sing N N 195 DT "O4'" "C1'" sing N N 196 DT "C3'" "O3'" sing N N 197 DT "C3'" "C2'" sing N N 198 DT "C3'" "H3'" sing N N 199 DT "O3'" "HO3'" sing N N 200 DT "C2'" "C1'" sing N N 201 DT "C2'" "H2'" sing N N 202 DT "C2'" "H2''" sing N N 203 DT "C1'" N1 sing N N 204 DT "C1'" "H1'" sing N N 205 DT N1 C2 sing N N 206 DT N1 C6 sing N N 207 DT C2 O2 doub N N 208 DT C2 N3 sing N N 209 DT N3 C4 sing N N 210 DT N3 H3 sing N N 211 DT C4 O4 doub N N 212 DT C4 C5 sing N N 213 DT C5 C7 sing N N 214 DT C5 C6 doub N N 215 DT C7 H71 sing N N 216 DT C7 H72 sing N N 217 DT C7 H73 sing N N 218 DT C6 H6 sing N N 219 GLN N CA sing N N 220 GLN N H sing N N 221 GLN N H2 sing N N 222 GLN CA C sing N N 223 GLN CA CB sing N N 224 GLN CA HA sing N N 225 GLN C O doub N N 226 GLN C OXT sing N N 227 GLN CB CG sing N N 228 GLN CB HB2 sing N N 229 GLN CB HB3 sing N N 230 GLN CG CD sing N N 231 GLN CG HG2 sing N N 232 GLN CG HG3 sing N N 233 GLN CD OE1 doub N N 234 GLN CD NE2 sing N N 235 GLN NE2 HE21 sing N N 236 GLN NE2 HE22 sing N N 237 GLN OXT HXT sing N N 238 GLU N CA sing N N 239 GLU N H sing N N 240 GLU N H2 sing N N 241 GLU CA C sing N N 242 GLU CA CB sing N N 243 GLU CA HA sing N N 244 GLU C O doub N N 245 GLU C OXT sing N N 246 GLU CB CG sing N N 247 GLU CB HB2 sing N N 248 GLU CB HB3 sing N N 249 GLU CG CD sing N N 250 GLU CG HG2 sing N N 251 GLU CG HG3 sing N N 252 GLU CD OE1 doub N N 253 GLU CD OE2 sing N N 254 GLU OE2 HE2 sing N N 255 GLU OXT HXT sing N N 256 GLY N CA sing N N 257 GLY N H sing N N 258 GLY N H2 sing N N 259 GLY CA C sing N N 260 GLY CA HA2 sing N N 261 GLY CA HA3 sing N N 262 GLY C O doub N N 263 GLY C OXT sing N N 264 GLY OXT HXT sing N N 265 HIS N CA sing N N 266 HIS N H sing N N 267 HIS N H2 sing N N 268 HIS CA C sing N N 269 HIS CA CB sing N N 270 HIS CA HA sing N N 271 HIS C O doub N N 272 HIS C OXT sing N N 273 HIS CB CG sing N N 274 HIS CB HB2 sing N N 275 HIS CB HB3 sing N N 276 HIS CG ND1 sing Y N 277 HIS CG CD2 doub Y N 278 HIS ND1 CE1 doub Y N 279 HIS ND1 HD1 sing N N 280 HIS CD2 NE2 sing Y N 281 HIS CD2 HD2 sing N N 282 HIS CE1 NE2 sing Y N 283 HIS CE1 HE1 sing N N 284 HIS NE2 HE2 sing N N 285 HIS OXT HXT sing N N 286 ILE N CA sing N N 287 ILE N H sing N N 288 ILE N H2 sing N N 289 ILE CA C sing N N 290 ILE CA CB sing N N 291 ILE CA HA sing N N 292 ILE C O doub N N 293 ILE C OXT sing N N 294 ILE CB CG1 sing N N 295 ILE CB CG2 sing N N 296 ILE CB HB sing N N 297 ILE CG1 CD1 sing N N 298 ILE CG1 HG12 sing N N 299 ILE CG1 HG13 sing N N 300 ILE CG2 HG21 sing N N 301 ILE CG2 HG22 sing N N 302 ILE CG2 HG23 sing N N 303 ILE CD1 HD11 sing N N 304 ILE CD1 HD12 sing N N 305 ILE CD1 HD13 sing N N 306 ILE OXT HXT sing N N 307 LEU N CA sing N N 308 LEU N H sing N N 309 LEU N H2 sing N N 310 LEU CA C sing N N 311 LEU CA CB sing N N 312 LEU CA HA sing N N 313 LEU C O doub N N 314 LEU C OXT sing N N 315 LEU CB CG sing N N 316 LEU CB HB2 sing N N 317 LEU CB HB3 sing N N 318 LEU CG CD1 sing N N 319 LEU CG CD2 sing N N 320 LEU CG HG sing N N 321 LEU CD1 HD11 sing N N 322 LEU CD1 HD12 sing N N 323 LEU CD1 HD13 sing N N 324 LEU CD2 HD21 sing N N 325 LEU CD2 HD22 sing N N 326 LEU CD2 HD23 sing N N 327 LEU OXT HXT sing N N 328 LYS N CA sing N N 329 LYS N H sing N N 330 LYS N H2 sing N N 331 LYS CA C sing N N 332 LYS CA CB sing N N 333 LYS CA HA sing N N 334 LYS C O doub N N 335 LYS C OXT sing N N 336 LYS CB CG sing N N 337 LYS CB HB2 sing N N 338 LYS CB HB3 sing N N 339 LYS CG CD sing N N 340 LYS CG HG2 sing N N 341 LYS CG HG3 sing N N 342 LYS CD CE sing N N 343 LYS CD HD2 sing N N 344 LYS CD HD3 sing N N 345 LYS CE NZ sing N N 346 LYS CE HE2 sing N N 347 LYS CE HE3 sing N N 348 LYS NZ HZ1 sing N N 349 LYS NZ HZ2 sing N N 350 LYS NZ HZ3 sing N N 351 LYS OXT HXT sing N N 352 MET N CA sing N N 353 MET N H sing N N 354 MET N H2 sing N N 355 MET CA C sing N N 356 MET CA CB sing N N 357 MET CA HA sing N N 358 MET C O doub N N 359 MET C OXT sing N N 360 MET CB CG sing N N 361 MET CB HB2 sing N N 362 MET CB HB3 sing N N 363 MET CG SD sing N N 364 MET CG HG2 sing N N 365 MET CG HG3 sing N N 366 MET SD CE sing N N 367 MET CE HE1 sing N N 368 MET CE HE2 sing N N 369 MET CE HE3 sing N N 370 MET OXT HXT sing N N 371 PHE N CA sing N N 372 PHE N H sing N N 373 PHE N H2 sing N N 374 PHE CA C sing N N 375 PHE CA CB sing N N 376 PHE CA HA sing N N 377 PHE C O doub N N 378 PHE C OXT sing N N 379 PHE CB CG sing N N 380 PHE CB HB2 sing N N 381 PHE CB HB3 sing N N 382 PHE CG CD1 doub Y N 383 PHE CG CD2 sing Y N 384 PHE CD1 CE1 sing Y N 385 PHE CD1 HD1 sing N N 386 PHE CD2 CE2 doub Y N 387 PHE CD2 HD2 sing N N 388 PHE CE1 CZ doub Y N 389 PHE CE1 HE1 sing N N 390 PHE CE2 CZ sing Y N 391 PHE CE2 HE2 sing N N 392 PHE CZ HZ sing N N 393 PHE OXT HXT sing N N 394 PRO N CA sing N N 395 PRO N CD sing N N 396 PRO N H sing N N 397 PRO CA C sing N N 398 PRO CA CB sing N N 399 PRO CA HA sing N N 400 PRO C O doub N N 401 PRO C OXT sing N N 402 PRO CB CG sing N N 403 PRO CB HB2 sing N N 404 PRO CB HB3 sing N N 405 PRO CG CD sing N N 406 PRO CG HG2 sing N N 407 PRO CG HG3 sing N N 408 PRO CD HD2 sing N N 409 PRO CD HD3 sing N N 410 PRO OXT HXT sing N N 411 SER N CA sing N N 412 SER N H sing N N 413 SER N H2 sing N N 414 SER CA C sing N N 415 SER CA CB sing N N 416 SER CA HA sing N N 417 SER C O doub N N 418 SER C OXT sing N N 419 SER CB OG sing N N 420 SER CB HB2 sing N N 421 SER CB HB3 sing N N 422 SER OG HG sing N N 423 SER OXT HXT sing N N 424 THR N CA sing N N 425 THR N H sing N N 426 THR N H2 sing N N 427 THR CA C sing N N 428 THR CA CB sing N N 429 THR CA HA sing N N 430 THR C O doub N N 431 THR C OXT sing N N 432 THR CB OG1 sing N N 433 THR CB CG2 sing N N 434 THR CB HB sing N N 435 THR OG1 HG1 sing N N 436 THR CG2 HG21 sing N N 437 THR CG2 HG22 sing N N 438 THR CG2 HG23 sing N N 439 THR OXT HXT sing N N 440 TRP N CA sing N N 441 TRP N H sing N N 442 TRP N H2 sing N N 443 TRP CA C sing N N 444 TRP CA CB sing N N 445 TRP CA HA sing N N 446 TRP C O doub N N 447 TRP C OXT sing N N 448 TRP CB CG sing N N 449 TRP CB HB2 sing N N 450 TRP CB HB3 sing N N 451 TRP CG CD1 doub Y N 452 TRP CG CD2 sing Y N 453 TRP CD1 NE1 sing Y N 454 TRP CD1 HD1 sing N N 455 TRP CD2 CE2 doub Y N 456 TRP CD2 CE3 sing Y N 457 TRP NE1 CE2 sing Y N 458 TRP NE1 HE1 sing N N 459 TRP CE2 CZ2 sing Y N 460 TRP CE3 CZ3 doub Y N 461 TRP CE3 HE3 sing N N 462 TRP CZ2 CH2 doub Y N 463 TRP CZ2 HZ2 sing N N 464 TRP CZ3 CH2 sing Y N 465 TRP CZ3 HZ3 sing N N 466 TRP CH2 HH2 sing N N 467 TRP OXT HXT sing N N 468 TYR N CA sing N N 469 TYR N H sing N N 470 TYR N H2 sing N N 471 TYR CA C sing N N 472 TYR CA CB sing N N 473 TYR CA HA sing N N 474 TYR C O doub N N 475 TYR C OXT sing N N 476 TYR CB CG sing N N 477 TYR CB HB2 sing N N 478 TYR CB HB3 sing N N 479 TYR CG CD1 doub Y N 480 TYR CG CD2 sing Y N 481 TYR CD1 CE1 sing Y N 482 TYR CD1 HD1 sing N N 483 TYR CD2 CE2 doub Y N 484 TYR CD2 HD2 sing N N 485 TYR CE1 CZ doub Y N 486 TYR CE1 HE1 sing N N 487 TYR CE2 CZ sing Y N 488 TYR CE2 HE2 sing N N 489 TYR CZ OH sing N N 490 TYR OH HH sing N N 491 TYR OXT HXT sing N N 492 VAL N CA sing N N 493 VAL N H sing N N 494 VAL N H2 sing N N 495 VAL CA C sing N N 496 VAL CA CB sing N N 497 VAL CA HA sing N N 498 VAL C O doub N N 499 VAL C OXT sing N N 500 VAL CB CG1 sing N N 501 VAL CB CG2 sing N N 502 VAL CB HB sing N N 503 VAL CG1 HG11 sing N N 504 VAL CG1 HG12 sing N N 505 VAL CG1 HG13 sing N N 506 VAL CG2 HG21 sing N N 507 VAL CG2 HG22 sing N N 508 VAL CG2 HG23 sing N N 509 VAL OXT HXT sing N N 510 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6J4G 'double helix' 6J4G 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 2 1_555 C DC 15 1_555 0.055 -0.327 0.549 8.252 -6.667 -1.585 1 C_DG2:DC15_D C 2 ? D 15 ? 19 1 1 B DC 3 1_555 C DG 14 1_555 0.243 -0.262 0.323 6.882 -10.730 0.037 2 C_DC3:DG14_D C 3 ? D 14 ? 19 1 1 B DC 4 1_555 C DG 13 1_555 -0.965 -0.092 0.667 -4.290 -13.592 4.916 3 C_DC4:DG13_D C 4 ? D 13 ? 19 1 1 B DT 5 1_555 C DA 12 1_555 -0.186 -0.001 0.431 -6.867 -14.359 -5.071 4 C_DT5:DA12_D C 5 ? D 12 ? 20 1 1 B DT 6 1_555 C DA 11 1_555 -0.456 -0.185 0.320 -13.255 -21.613 -0.224 5 C_DT6:DA11_D C 6 ? D 11 ? 20 1 1 B DT 7 1_555 C DA 10 1_555 -0.171 -0.235 0.092 -14.871 -10.547 -0.589 6 C_DT7:DA10_D C 7 ? D 10 ? 20 1 1 B DG 8 1_555 C DC 9 1_555 -0.440 -0.300 0.056 2.394 -5.294 -0.714 7 C_DG8:DC9_D C 8 ? D 9 ? 19 1 1 B DA 9 1_555 C DT 8 1_555 0.023 -0.172 0.197 9.153 -6.975 -2.298 8 C_DA9:DT8_D C 9 ? D 8 ? 20 1 1 B DC 10 1_555 C DG 7 1_555 0.384 -0.095 0.115 6.185 -12.867 0.331 9 C_DC10:DG7_D C 10 ? D 7 ? 19 1 1 B DC 11 1_555 C DG 6 1_555 0.475 -0.010 0.549 -8.052 -12.397 6.915 10 C_DC11:DG6_D C 11 ? D 6 ? 19 1 1 B DA 12 1_555 C DT 5 1_555 0.773 -0.543 -0.156 -0.683 -5.566 -4.706 11 C_DA12:DT5_D C 12 ? D 5 ? 20 1 1 B DG 13 1_555 C DC 4 1_555 0.314 -0.313 0.221 6.474 -7.219 -5.934 12 C_DG13:DC4_D C 13 ? D 4 ? 19 1 1 B DC 14 1_555 C DG 3 1_555 -0.720 -0.273 -0.059 -0.793 -10.429 -4.779 13 C_DC14:DG3_D C 14 ? D 3 ? 19 1 1 B DG 15 1_555 C DC 2 1_555 0.095 -0.322 0.061 0.891 -12.924 -5.435 14 C_DG15:DC2_D C 15 ? D 2 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 2 1_555 C DC 15 1_555 B DC 3 1_555 C DG 14 1_555 0.198 -0.775 3.239 3.431 2.871 32.455 -1.861 0.231 3.165 5.107 -6.102 32.754 1 CC_DG2DC3:DG14DC15_DD C 2 ? D 15 ? C 3 ? D 14 ? 1 B DC 3 1_555 C DG 14 1_555 B DC 4 1_555 C DG 13 1_555 0.557 -0.864 3.381 -2.235 4.774 30.514 -2.549 -1.479 3.165 8.985 4.207 30.956 2 CC_DC3DC4:DG13DG14_DD C 3 ? D 14 ? C 4 ? D 13 ? 1 B DC 4 1_555 C DG 13 1_555 B DT 5 1_555 C DA 12 1_555 -0.969 -0.413 3.413 2.236 3.413 39.198 -1.029 1.709 3.308 5.070 -3.322 39.401 3 CC_DC4DT5:DA12DG13_DD C 4 ? D 13 ? C 5 ? D 12 ? 1 B DT 5 1_555 C DA 12 1_555 B DT 6 1_555 C DA 11 1_555 -0.015 -0.292 3.274 0.948 2.046 35.893 -0.764 0.159 3.252 3.316 -1.537 35.961 4 CC_DT5DT6:DA11DA12_DD C 5 ? D 12 ? C 6 ? D 11 ? 1 B DT 6 1_555 C DA 11 1_555 B DT 7 1_555 C DA 10 1_555 0.681 0.520 3.360 1.942 5.940 37.907 0.017 -0.783 3.429 9.068 -2.964 38.400 5 CC_DT6DT7:DA10DA11_DD C 6 ? D 11 ? C 7 ? D 10 ? 1 B DT 7 1_555 C DA 10 1_555 B DG 8 1_555 C DC 9 1_555 -0.765 0.838 2.977 -3.608 6.163 26.111 0.296 0.760 3.163 13.328 7.802 27.053 6 CC_DT7DG8:DC9DA10_DD C 7 ? D 10 ? C 8 ? D 9 ? 1 B DG 8 1_555 C DC 9 1_555 B DA 9 1_555 C DT 8 1_555 0.247 -0.073 3.110 -3.112 -4.476 39.346 0.387 -0.708 3.072 -6.609 4.596 39.708 7 CC_DG8DA9:DT8DC9_DD C 8 ? D 9 ? C 9 ? D 8 ? 1 B DA 9 1_555 C DT 8 1_555 B DC 10 1_555 C DG 7 1_555 -0.187 -0.757 3.450 -1.328 -0.753 37.219 -1.079 0.107 3.469 -1.179 2.080 37.250 8 CC_DA9DC10:DG7DT8_DD C 9 ? D 8 ? C 10 ? D 7 ? 1 B DC 10 1_555 C DG 7 1_555 B DC 11 1_555 C DG 6 1_555 -0.120 -0.524 3.572 -2.887 3.980 39.271 -1.281 -0.191 3.504 5.893 4.276 39.566 9 CC_DC10DC11:DG6DG7_DD C 10 ? D 7 ? C 11 ? D 6 ? 1 B DC 11 1_555 C DG 6 1_555 B DA 12 1_555 C DT 5 1_555 -0.719 0.490 3.188 1.671 4.938 36.165 0.114 1.373 3.190 7.903 -2.674 36.526 10 CC_DC11DA12:DT5DG6_DD C 11 ? D 6 ? C 12 ? D 5 ? 1 B DA 12 1_555 C DT 5 1_555 B DG 13 1_555 C DC 4 1_555 -0.209 0.070 3.097 -4.210 2.656 30.542 -0.358 -0.384 3.092 5.000 7.926 30.935 11 CC_DA12DG13:DC4DT5_DD C 12 ? D 5 ? C 13 ? D 4 ? 1 B DG 13 1_555 C DC 4 1_555 B DC 14 1_555 C DG 3 1_555 0.574 0.529 3.423 4.351 2.291 31.463 0.519 -0.201 3.497 4.193 -7.963 31.835 12 CC_DG13DC14:DG3DC4_DD C 13 ? D 4 ? C 14 ? D 3 ? 1 B DC 14 1_555 C DG 3 1_555 B DG 15 1_555 C DC 2 1_555 -0.554 0.838 3.363 -1.443 6.525 36.786 0.402 0.665 3.474 10.235 2.263 37.367 13 CC_DC14DG15:DC2DG3_DD C 14 ? D 3 ? C 15 ? D 2 ? # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 31670740 _pdbx_audit_support.ordinal 1 # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2AYD _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #