data_6JF9 # _entry.id 6JF9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6JF9 pdb_00006jf9 10.2210/pdb6jf9/pdb WWPDB D_1300011003 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6JF9 _pdbx_database_status.recvd_initial_deposition_date 2019-02-08 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Lee, I.H.' 1 0000-0003-3529-470X 'Ho, T.H.' 2 0000-0002-3706-7917 'Kang, L.W.' 3 0000-0002-1411-3132 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To be published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Apo crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lee, I.H.' 1 0000-0003-3529-470X primary 'Ho, T.H.' 2 0000-0002-3706-7917 primary 'Kang, L.W.' 3 0000-0002-1411-3132 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6JF9 _cell.details ? _cell.formula_units_Z ? _cell.length_a 44.486 _cell.length_a_esd ? _cell.length_b 122.045 _cell.length_b_esd ? _cell.length_c 149.380 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JF9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Peptide deformylase' 19215.947 2 3.5.1.88 ? ? ? 2 non-polymer syn 'NICKEL (II) ION' 58.693 2 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 water nat water 18.015 62 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;IREILKMGDERLLRIAQPVPSELLGSEELQRLIDDMFETMHHVGGVGLAAPQIGVDLQLVIFGFERSERYPDAPAVPPTI LLNPRITPLDDEMEEGWEGCLSVPGLRGAVSRHRRIRYQGLDPQGQPIDRSVEGFHARVVQHECDHLIGRLYPSRITDFS KFGFTEVLFP ; _entity_poly.pdbx_seq_one_letter_code_can ;IREILKMGDERLLRIAQPVPSELLGSEELQRLIDDMFETMHHVGGVGLAAPQIGVDLQLVIFGFERSERYPDAPAVPPTI LLNPRITPLDDEMEEGWEGCLSVPGLRGAVSRHRRIRYQGLDPQGQPIDRSVEGFHARVVQHECDHLIGRLYPSRITDFS KFGFTEVLFP ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 ARG n 1 3 GLU n 1 4 ILE n 1 5 LEU n 1 6 LYS n 1 7 MET n 1 8 GLY n 1 9 ASP n 1 10 GLU n 1 11 ARG n 1 12 LEU n 1 13 LEU n 1 14 ARG n 1 15 ILE n 1 16 ALA n 1 17 GLN n 1 18 PRO n 1 19 VAL n 1 20 PRO n 1 21 SER n 1 22 GLU n 1 23 LEU n 1 24 LEU n 1 25 GLY n 1 26 SER n 1 27 GLU n 1 28 GLU n 1 29 LEU n 1 30 GLN n 1 31 ARG n 1 32 LEU n 1 33 ILE n 1 34 ASP n 1 35 ASP n 1 36 MET n 1 37 PHE n 1 38 GLU n 1 39 THR n 1 40 MET n 1 41 HIS n 1 42 HIS n 1 43 VAL n 1 44 GLY n 1 45 GLY n 1 46 VAL n 1 47 GLY n 1 48 LEU n 1 49 ALA n 1 50 ALA n 1 51 PRO n 1 52 GLN n 1 53 ILE n 1 54 GLY n 1 55 VAL n 1 56 ASP n 1 57 LEU n 1 58 GLN n 1 59 LEU n 1 60 VAL n 1 61 ILE n 1 62 PHE n 1 63 GLY n 1 64 PHE n 1 65 GLU n 1 66 ARG n 1 67 SER n 1 68 GLU n 1 69 ARG n 1 70 TYR n 1 71 PRO n 1 72 ASP n 1 73 ALA n 1 74 PRO n 1 75 ALA n 1 76 VAL n 1 77 PRO n 1 78 PRO n 1 79 THR n 1 80 ILE n 1 81 LEU n 1 82 LEU n 1 83 ASN n 1 84 PRO n 1 85 ARG n 1 86 ILE n 1 87 THR n 1 88 PRO n 1 89 LEU n 1 90 ASP n 1 91 ASP n 1 92 GLU n 1 93 MET n 1 94 GLU n 1 95 GLU n 1 96 GLY n 1 97 TRP n 1 98 GLU n 1 99 GLY n 1 100 CYS n 1 101 LEU n 1 102 SER n 1 103 VAL n 1 104 PRO n 1 105 GLY n 1 106 LEU n 1 107 ARG n 1 108 GLY n 1 109 ALA n 1 110 VAL n 1 111 SER n 1 112 ARG n 1 113 HIS n 1 114 ARG n 1 115 ARG n 1 116 ILE n 1 117 ARG n 1 118 TYR n 1 119 GLN n 1 120 GLY n 1 121 LEU n 1 122 ASP n 1 123 PRO n 1 124 GLN n 1 125 GLY n 1 126 GLN n 1 127 PRO n 1 128 ILE n 1 129 ASP n 1 130 ARG n 1 131 SER n 1 132 VAL n 1 133 GLU n 1 134 GLY n 1 135 PHE n 1 136 HIS n 1 137 ALA n 1 138 ARG n 1 139 VAL n 1 140 VAL n 1 141 GLN n 1 142 HIS n 1 143 GLU n 1 144 CYS n 1 145 ASP n 1 146 HIS n 1 147 LEU n 1 148 ILE n 1 149 GLY n 1 150 ARG n 1 151 LEU n 1 152 TYR n 1 153 PRO n 1 154 SER n 1 155 ARG n 1 156 ILE n 1 157 THR n 1 158 ASP n 1 159 PHE n 1 160 SER n 1 161 LYS n 1 162 PHE n 1 163 GLY n 1 164 PHE n 1 165 THR n 1 166 GLU n 1 167 VAL n 1 168 LEU n 1 169 PHE n 1 170 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 170 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain PAE0831 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pseudomonas aeruginosa' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 287 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET11a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A1C7BES9_PSEAI _struct_ref.pdbx_db_accession A0A1C7BES9 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;IREILKMGDERLLRIAQPVPSELLGSEELQRLIDDMFETMHHVGGVGLAAPQIGVDLQLVIFGFERSERYPDAPAVPPTI LLNPRITPLDDEMEEGWEGCLSVPGLRGAVSRHRRIRYQGLDPQGQPIDRSVEGFHARVVQHECDHLIGRLYPSRITDFS KFGFTEVLFP ; _struct_ref.pdbx_align_begin 2 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6JF9 A 1 ? 170 ? A0A1C7BES9 2 ? 171 ? 4 173 2 1 6JF9 B 1 ? 170 ? A0A1C7BES9 2 ? 171 ? 4 173 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6JF9 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.78 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 55.74 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity 0.399 _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method EVAPORATION _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 287 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.03 M CaCl2, 0.03 M MgCl2, 0.1 M Sodium Hepes: MOPS pH 8.0, 10.0% (v/v) MPD, 10.0% (w/v) P1k, 10.0% (w/v) PEG 3,350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-02-26 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97960 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PAL/PLS BEAMLINE 5C (4A)' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97960 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline '5C (4A)' _diffrn_source.pdbx_synchrotron_site PAL/PLS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6JF9 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.700 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 41544 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 92.100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.900 _reflns.pdbx_Rmerge_I_obs 0.103 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 22.400 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 8.767 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.108 _reflns.pdbx_Rpim_I_all 0.032 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.700 1.730 ? ? ? ? ? ? 2045 93.000 ? ? ? ? 0.420 ? ? ? ? ? ? ? ? 12.700 ? 7.508 ? ? 0.437 0.118 ? 1 1 0.957 ? 1.730 1.760 ? ? ? ? ? ? 2085 92.800 ? ? ? ? 0.248 ? ? ? ? ? ? ? ? 13.500 ? 2.298 ? ? 0.258 0.069 ? 2 1 0.987 ? 1.760 1.790 ? ? ? ? ? ? 2071 93.200 ? ? ? ? 0.208 ? ? ? ? ? ? ? ? 13.500 ? 2.380 ? ? 0.217 0.058 ? 3 1 0.992 ? 1.790 1.830 ? ? ? ? ? ? 2063 94.000 ? ? ? ? 0.178 ? ? ? ? ? ? ? ? 13.400 ? 2.638 ? ? 0.185 0.050 ? 4 1 0.987 ? 1.830 1.870 ? ? ? ? ? ? 2095 93.700 ? ? ? ? 0.180 ? ? ? ? ? ? ? ? 13.000 ? 3.252 ? ? 0.187 0.051 ? 5 1 0.993 ? 1.870 1.910 ? ? ? ? ? ? 2117 93.500 ? ? ? ? 0.356 ? ? ? ? ? ? ? ? 9.200 ? 24.707 ? ? 0.379 0.122 ? 6 1 0.851 ? 1.910 1.960 ? ? ? ? ? ? 2060 92.800 ? ? ? ? 0.291 ? ? ? ? ? ? ? ? 9.300 ? 17.537 ? ? 0.307 0.093 ? 7 1 0.869 ? 1.960 2.020 ? ? ? ? ? ? 2154 96.500 ? ? ? ? 0.120 ? ? ? ? ? ? ? ? 12.800 ? 4.793 ? ? 0.125 0.035 ? 8 1 0.995 ? 2.020 2.070 ? ? ? ? ? ? 1973 89.000 ? ? ? ? 0.187 ? ? ? ? ? ? ? ? 8.700 ? 10.340 ? ? 0.203 0.074 ? 9 1 0.912 ? 2.070 2.140 ? ? ? ? ? ? 2180 97.200 ? ? ? ? 0.114 ? ? ? ? ? ? ? ? 11.100 ? 7.584 ? ? 0.119 0.035 ? 10 1 0.994 ? 2.140 2.220 ? ? ? ? ? ? 2226 98.900 ? ? ? ? 0.100 ? ? ? ? ? ? ? ? 12.900 ? 6.902 ? ? 0.104 0.029 ? 11 1 0.996 ? 2.220 2.310 ? ? ? ? ? ? 2105 93.500 ? ? ? ? 0.164 ? ? ? ? ? ? ? ? 9.500 ? 11.791 ? ? 0.176 0.059 ? 12 1 0.939 ? 2.310 2.410 ? ? ? ? ? ? 2219 99.800 ? ? ? ? 0.086 ? ? ? ? ? ? ? ? 13.200 ? 7.092 ? ? 0.090 0.025 ? 13 1 0.997 ? 2.410 2.540 ? ? ? ? ? ? 2243 99.700 ? ? ? ? 0.082 ? ? ? ? ? ? ? ? 13.200 ? 7.479 ? ? 0.086 0.023 ? 14 1 0.997 ? 2.540 2.700 ? ? ? ? ? ? 2236 98.100 ? ? ? ? 0.097 ? ? ? ? ? ? ? ? 11.400 ? 10.353 ? ? 0.102 0.031 ? 15 1 0.990 ? 2.700 2.910 ? ? ? ? ? ? 2261 99.800 ? ? ? ? 0.082 ? ? ? ? ? ? ? ? 13.300 ? 9.477 ? ? 0.085 0.023 ? 16 1 0.995 ? 2.910 3.200 ? ? ? ? ? ? 2266 99.900 ? ? ? ? 0.089 ? ? ? ? ? ? ? ? 13.400 ? 12.356 ? ? 0.092 0.026 ? 17 1 0.993 ? 3.200 3.660 ? ? ? ? ? ? 1663 72.500 ? ? ? ? 0.091 ? ? ? ? ? ? ? ? 10.100 ? 15.599 ? ? 0.096 0.029 ? 18 1 0.992 ? 3.660 4.610 ? ? ? ? ? ? 1453 62.700 ? ? ? ? 0.073 ? ? ? ? ? ? ? ? 10.000 ? 12.586 ? ? 0.077 0.024 ? 19 1 0.995 ? 4.610 50.000 ? ? ? ? ? ? 2029 83.100 ? ? ? ? 0.074 ? ? ? ? ? ? ? ? 11.500 ? 13.571 ? ? 0.077 0.023 ? 20 1 0.995 ? # _refine.aniso_B[1][1] 0.0000 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][2] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -0.0000 _refine.B_iso_max 70.360 _refine.B_iso_mean 24.1600 _refine.B_iso_min 11.870 _refine.correlation_coeff_Fo_to_Fc 0.9110 _refine.correlation_coeff_Fo_to_Fc_free 0.8830 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6JF9 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.7000 _refine.ls_d_res_low 49.9900 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 39304 _refine.ls_number_reflns_R_free 2057 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 91.6700 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2449 _refine.ls_R_factor_R_free 0.2807 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2431 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5vcp _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.1300 _refine.pdbx_overall_ESU_R_Free 0.1280 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 2.6190 _refine.overall_SU_ML 0.0870 _refine.overall_SU_R_Cruickshank_DPI 0.1296 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.7000 _refine_hist.d_res_low 49.9900 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 62 _refine_hist.number_atoms_total 2591 _refine_hist.pdbx_number_residues_total 321 _refine_hist.pdbx_B_iso_mean_ligand 44.51 _refine_hist.pdbx_B_iso_mean_solvent 23.22 _refine_hist.pdbx_number_atoms_protein 2521 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.020 0.019 2581 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 2445 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 2.107 1.982 3492 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.140 3.000 5658 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.335 5.000 317 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 35.307 23.008 123 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 15.698 15.000 435 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 14.849 15.000 27 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.152 0.200 386 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.012 0.021 2855 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 524 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.7020 _refine_ls_shell.d_res_low 1.7460 _refine_ls_shell.number_reflns_all 2947 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 143 _refine_ls_shell.number_reflns_R_work 2804 _refine_ls_shell.percent_reflns_obs 90.0100 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3950 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.3250 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6JF9 _struct.title 'Apo crystal structure of class I type b peptide deformylase from Pseudomonas aeruginosa' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6JF9 _struct_keywords.text 'peptide deformylase, hydrolase' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 9 ? ARG A 14 ? ASP A 12 ARG A 17 5 ? 6 HELX_P HELX_P2 AA2 PRO A 20 ? LEU A 24 ? PRO A 23 LEU A 27 5 ? 5 HELX_P HELX_P3 AA3 SER A 26 ? GLY A 44 ? SER A 29 GLY A 47 1 ? 19 HELX_P HELX_P4 AA4 PRO A 51 ? GLY A 54 ? PRO A 54 GLY A 57 5 ? 4 HELX_P HELX_P5 AA5 GLY A 134 ? LEU A 147 ? GLY A 137 LEU A 150 1 ? 14 HELX_P HELX_P6 AA6 LEU A 151 ? ILE A 156 ? LEU A 154 ILE A 159 5 ? 6 HELX_P HELX_P7 AA7 ASP A 158 ? PHE A 162 ? ASP A 161 PHE A 165 5 ? 5 HELX_P HELX_P8 AA8 ASP B 9 ? ARG B 14 ? ASP B 12 ARG B 17 5 ? 6 HELX_P HELX_P9 AA9 PRO B 20 ? LEU B 24 ? PRO B 23 LEU B 27 5 ? 5 HELX_P HELX_P10 AB1 SER B 26 ? GLY B 44 ? SER B 29 GLY B 47 1 ? 19 HELX_P HELX_P11 AB2 PRO B 51 ? GLY B 54 ? PRO B 54 GLY B 57 5 ? 4 HELX_P HELX_P12 AB3 GLY B 134 ? LEU B 147 ? GLY B 137 LEU B 150 1 ? 14 HELX_P HELX_P13 AB4 LEU B 151 ? ILE B 156 ? LEU B 154 ILE B 159 5 ? 6 HELX_P HELX_P14 AB5 ASP B 158 ? PHE B 162 ? ASP B 161 PHE B 165 5 ? 5 HELX_P HELX_P15 AB6 THR B 165 ? PHE B 169 ? THR B 168 PHE B 172 1 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 100 SG ? ? ? 1_555 C NI . NI ? ? A CYS 103 A NI 201 1_555 ? ? ? ? ? ? ? 2.024 ? ? metalc2 metalc ? ? A HIS 142 NE2 ? ? ? 1_555 C NI . NI ? ? A HIS 145 A NI 201 1_555 ? ? ? ? ? ? ? 2.379 ? ? metalc3 metalc ? ? A HIS 146 NE2 ? ? ? 1_555 C NI . NI ? ? A HIS 149 A NI 201 1_555 ? ? ? ? ? ? ? 2.391 ? ? metalc4 metalc ? ? B CYS 100 SG ? ? ? 1_555 D NI . NI ? ? B CYS 103 B NI 201 1_555 ? ? ? ? ? ? ? 2.169 ? ? metalc5 metalc ? ? B HIS 142 NE2 ? ? ? 1_555 D NI . NI ? ? B HIS 145 B NI 201 1_555 ? ? ? ? ? ? ? 2.380 ? ? metalc6 metalc ? ? B HIS 146 NE2 ? ? ? 1_555 D NI . NI ? ? B HIS 149 B NI 201 1_555 ? ? ? ? ? ? ? 2.108 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 3 ? AA3 ? 5 ? AA4 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLY A 47 ? ALA A 49 ? GLY A 50 ALA A 52 AA1 2 LEU A 59 ? PHE A 62 ? LEU A 62 PHE A 65 AA1 3 THR A 79 ? PRO A 88 ? THR A 82 PRO A 91 AA1 4 ARG A 115 ? LEU A 121 ? ARG A 118 LEU A 124 AA1 5 PRO A 127 ? GLU A 133 ? PRO A 130 GLU A 136 AA2 1 MET A 93 ? GLU A 98 ? MET A 96 GLU A 101 AA2 2 LEU A 106 ? HIS A 113 ? LEU A 109 HIS A 116 AA2 3 GLY A 163 ? PHE A 164 ? GLY A 166 PHE A 167 AA3 1 GLY B 47 ? ALA B 49 ? GLY B 50 ALA B 52 AA3 2 LEU B 59 ? PHE B 64 ? LEU B 62 PHE B 67 AA3 3 VAL B 76 ? PRO B 88 ? VAL B 79 PRO B 91 AA3 4 ARG B 115 ? LEU B 121 ? ARG B 118 LEU B 124 AA3 5 PRO B 127 ? GLU B 133 ? PRO B 130 GLU B 136 AA4 1 MET B 93 ? GLU B 98 ? MET B 96 GLU B 101 AA4 2 LEU B 106 ? HIS B 113 ? LEU B 109 HIS B 116 AA4 3 GLY B 163 ? PHE B 164 ? GLY B 166 PHE B 167 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 48 ? N LEU A 51 O ILE A 61 ? O ILE A 64 AA1 2 3 N VAL A 60 ? N VAL A 63 O LEU A 81 ? O LEU A 84 AA1 3 4 N LEU A 82 ? N LEU A 85 O LEU A 121 ? O LEU A 124 AA1 4 5 N TYR A 118 ? N TYR A 121 O ARG A 130 ? O ARG A 133 AA2 1 2 N GLU A 98 ? N GLU A 101 O GLY A 108 ? O GLY A 111 AA2 2 3 N ARG A 107 ? N ARG A 110 O GLY A 163 ? O GLY A 166 AA3 1 2 N LEU B 48 ? N LEU B 51 O ILE B 61 ? O ILE B 64 AA3 2 3 N VAL B 60 ? N VAL B 63 O LEU B 81 ? O LEU B 84 AA3 3 4 N THR B 87 ? N THR B 90 O ARG B 117 ? O ARG B 120 AA3 4 5 N TYR B 118 ? N TYR B 121 O ARG B 130 ? O ARG B 133 AA4 1 2 N GLU B 98 ? N GLU B 101 O GLY B 108 ? O GLY B 111 AA4 2 3 N ARG B 107 ? N ARG B 110 O GLY B 163 ? O GLY B 166 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NI 201 ? 4 'binding site for residue NI A 201' AC2 Software B NI 201 ? 5 'binding site for residue NI B 201' AC3 Software B GOL 202 ? 3 'binding site for residue GOL B 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 100 ? CYS A 103 . ? 1_555 ? 2 AC1 4 HIS A 142 ? HIS A 145 . ? 1_555 ? 3 AC1 4 HIS A 146 ? HIS A 149 . ? 1_555 ? 4 AC1 4 HOH F . ? HOH A 306 . ? 1_555 ? 5 AC2 5 GLN B 52 ? GLN B 55 . ? 1_555 ? 6 AC2 5 CYS B 100 ? CYS B 103 . ? 1_555 ? 7 AC2 5 HIS B 142 ? HIS B 145 . ? 1_555 ? 8 AC2 5 HIS B 146 ? HIS B 149 . ? 1_555 ? 9 AC2 5 HOH G . ? HOH B 303 . ? 1_555 ? 10 AC3 3 GLU B 98 ? GLU B 101 . ? 1_555 ? 11 AC3 3 GLY B 99 ? GLY B 102 . ? 1_555 ? 12 AC3 3 PHE B 135 ? PHE B 138 . ? 1_555 ? # _atom_sites.entry_id 6JF9 _atom_sites.fract_transf_matrix[1][1] 0.022479 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008194 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006694 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N NI O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 4 4 ILE ILE A . n A 1 2 ARG 2 5 5 ARG ARG A . n A 1 3 GLU 3 6 6 GLU GLU A . n A 1 4 ILE 4 7 7 ILE ILE A . n A 1 5 LEU 5 8 8 LEU LEU A . n A 1 6 LYS 6 9 9 LYS LYS A . n A 1 7 MET 7 10 10 MET MET A . n A 1 8 GLY 8 11 11 GLY GLY A . n A 1 9 ASP 9 12 12 ASP ASP A . n A 1 10 GLU 10 13 13 GLU GLU A . n A 1 11 ARG 11 14 14 ARG ARG A . n A 1 12 LEU 12 15 15 LEU LEU A . n A 1 13 LEU 13 16 16 LEU LEU A . n A 1 14 ARG 14 17 17 ARG ARG A . n A 1 15 ILE 15 18 18 ILE ILE A . n A 1 16 ALA 16 19 19 ALA ALA A . n A 1 17 GLN 17 20 20 GLN GLN A . n A 1 18 PRO 18 21 21 PRO PRO A . n A 1 19 VAL 19 22 22 VAL VAL A . n A 1 20 PRO 20 23 23 PRO PRO A . n A 1 21 SER 21 24 24 SER SER A . n A 1 22 GLU 22 25 25 GLU GLU A . n A 1 23 LEU 23 26 26 LEU LEU A . n A 1 24 LEU 24 27 27 LEU LEU A . n A 1 25 GLY 25 28 28 GLY GLY A . n A 1 26 SER 26 29 29 SER SER A . n A 1 27 GLU 27 30 30 GLU GLU A . n A 1 28 GLU 28 31 31 GLU GLU A . n A 1 29 LEU 29 32 32 LEU LEU A . n A 1 30 GLN 30 33 33 GLN GLN A . n A 1 31 ARG 31 34 34 ARG ARG A . n A 1 32 LEU 32 35 35 LEU LEU A . n A 1 33 ILE 33 36 36 ILE ILE A . n A 1 34 ASP 34 37 37 ASP ASP A . n A 1 35 ASP 35 38 38 ASP ASP A . n A 1 36 MET 36 39 39 MET MET A . n A 1 37 PHE 37 40 40 PHE PHE A . n A 1 38 GLU 38 41 41 GLU GLU A . n A 1 39 THR 39 42 42 THR THR A . n A 1 40 MET 40 43 43 MET MET A . n A 1 41 HIS 41 44 44 HIS HIS A . n A 1 42 HIS 42 45 45 HIS HIS A . n A 1 43 VAL 43 46 46 VAL VAL A . n A 1 44 GLY 44 47 47 GLY GLY A . n A 1 45 GLY 45 48 48 GLY GLY A . n A 1 46 VAL 46 49 49 VAL VAL A . n A 1 47 GLY 47 50 50 GLY GLY A . n A 1 48 LEU 48 51 51 LEU LEU A . n A 1 49 ALA 49 52 52 ALA ALA A . n A 1 50 ALA 50 53 53 ALA ALA A . n A 1 51 PRO 51 54 54 PRO PRO A . n A 1 52 GLN 52 55 55 GLN GLN A . n A 1 53 ILE 53 56 56 ILE ILE A . n A 1 54 GLY 54 57 57 GLY GLY A . n A 1 55 VAL 55 58 58 VAL VAL A . n A 1 56 ASP 56 59 59 ASP ASP A . n A 1 57 LEU 57 60 60 LEU LEU A . n A 1 58 GLN 58 61 61 GLN GLN A . n A 1 59 LEU 59 62 62 LEU LEU A . n A 1 60 VAL 60 63 63 VAL VAL A . n A 1 61 ILE 61 64 64 ILE ILE A . n A 1 62 PHE 62 65 65 PHE PHE A . n A 1 63 GLY 63 66 66 GLY GLY A . n A 1 64 PHE 64 67 67 PHE PHE A . n A 1 65 GLU 65 68 ? ? ? A . n A 1 66 ARG 66 69 ? ? ? A . n A 1 67 SER 67 70 ? ? ? A . n A 1 68 GLU 68 71 ? ? ? A . n A 1 69 ARG 69 72 ? ? ? A . n A 1 70 TYR 70 73 ? ? ? A . n A 1 71 PRO 71 74 ? ? ? A . n A 1 72 ASP 72 75 ? ? ? A . n A 1 73 ALA 73 76 ? ? ? A . n A 1 74 PRO 74 77 77 PRO PRO A . n A 1 75 ALA 75 78 78 ALA ALA A . n A 1 76 VAL 76 79 79 VAL VAL A . n A 1 77 PRO 77 80 80 PRO PRO A . n A 1 78 PRO 78 81 81 PRO PRO A . n A 1 79 THR 79 82 82 THR THR A . n A 1 80 ILE 80 83 83 ILE ILE A . n A 1 81 LEU 81 84 84 LEU LEU A . n A 1 82 LEU 82 85 85 LEU LEU A . n A 1 83 ASN 83 86 86 ASN ASN A . n A 1 84 PRO 84 87 87 PRO PRO A . n A 1 85 ARG 85 88 88 ARG ARG A . n A 1 86 ILE 86 89 89 ILE ILE A . n A 1 87 THR 87 90 90 THR THR A . n A 1 88 PRO 88 91 91 PRO PRO A . n A 1 89 LEU 89 92 92 LEU LEU A . n A 1 90 ASP 90 93 93 ASP ASP A . n A 1 91 ASP 91 94 94 ASP ASP A . n A 1 92 GLU 92 95 95 GLU GLU A . n A 1 93 MET 93 96 96 MET MET A . n A 1 94 GLU 94 97 97 GLU GLU A . n A 1 95 GLU 95 98 98 GLU GLU A . n A 1 96 GLY 96 99 99 GLY GLY A . n A 1 97 TRP 97 100 100 TRP TRP A . n A 1 98 GLU 98 101 101 GLU GLU A . n A 1 99 GLY 99 102 102 GLY GLY A . n A 1 100 CYS 100 103 103 CYS CYS A . n A 1 101 LEU 101 104 104 LEU LEU A . n A 1 102 SER 102 105 105 SER SER A . n A 1 103 VAL 103 106 106 VAL VAL A . n A 1 104 PRO 104 107 107 PRO PRO A . n A 1 105 GLY 105 108 108 GLY GLY A . n A 1 106 LEU 106 109 109 LEU LEU A . n A 1 107 ARG 107 110 110 ARG ARG A . n A 1 108 GLY 108 111 111 GLY GLY A . n A 1 109 ALA 109 112 112 ALA ALA A . n A 1 110 VAL 110 113 113 VAL VAL A . n A 1 111 SER 111 114 114 SER SER A . n A 1 112 ARG 112 115 115 ARG ARG A . n A 1 113 HIS 113 116 116 HIS HIS A . n A 1 114 ARG 114 117 117 ARG ARG A . n A 1 115 ARG 115 118 118 ARG ARG A . n A 1 116 ILE 116 119 119 ILE ILE A . n A 1 117 ARG 117 120 120 ARG ARG A . n A 1 118 TYR 118 121 121 TYR TYR A . n A 1 119 GLN 119 122 122 GLN GLN A . n A 1 120 GLY 120 123 123 GLY GLY A . n A 1 121 LEU 121 124 124 LEU LEU A . n A 1 122 ASP 122 125 125 ASP ASP A . n A 1 123 PRO 123 126 126 PRO PRO A . n A 1 124 GLN 124 127 127 GLN GLN A . n A 1 125 GLY 125 128 128 GLY GLY A . n A 1 126 GLN 126 129 129 GLN GLN A . n A 1 127 PRO 127 130 130 PRO PRO A . n A 1 128 ILE 128 131 131 ILE ILE A . n A 1 129 ASP 129 132 132 ASP ASP A . n A 1 130 ARG 130 133 133 ARG ARG A . n A 1 131 SER 131 134 134 SER SER A . n A 1 132 VAL 132 135 135 VAL VAL A . n A 1 133 GLU 133 136 136 GLU GLU A . n A 1 134 GLY 134 137 137 GLY GLY A . n A 1 135 PHE 135 138 138 PHE PHE A . n A 1 136 HIS 136 139 139 HIS HIS A . n A 1 137 ALA 137 140 140 ALA ALA A . n A 1 138 ARG 138 141 141 ARG ARG A . n A 1 139 VAL 139 142 142 VAL VAL A . n A 1 140 VAL 140 143 143 VAL VAL A . n A 1 141 GLN 141 144 144 GLN GLN A . n A 1 142 HIS 142 145 145 HIS HIS A . n A 1 143 GLU 143 146 146 GLU GLU A . n A 1 144 CYS 144 147 147 CYS CYS A . n A 1 145 ASP 145 148 148 ASP ASP A . n A 1 146 HIS 146 149 149 HIS HIS A . n A 1 147 LEU 147 150 150 LEU LEU A . n A 1 148 ILE 148 151 151 ILE ILE A . n A 1 149 GLY 149 152 152 GLY GLY A . n A 1 150 ARG 150 153 153 ARG ARG A . n A 1 151 LEU 151 154 154 LEU LEU A . n A 1 152 TYR 152 155 155 TYR TYR A . n A 1 153 PRO 153 156 156 PRO PRO A . n A 1 154 SER 154 157 157 SER SER A . n A 1 155 ARG 155 158 158 ARG ARG A . n A 1 156 ILE 156 159 159 ILE ILE A . n A 1 157 THR 157 160 160 THR THR A . n A 1 158 ASP 158 161 161 ASP ASP A . n A 1 159 PHE 159 162 162 PHE PHE A . n A 1 160 SER 160 163 163 SER SER A . n A 1 161 LYS 161 164 164 LYS LYS A . n A 1 162 PHE 162 165 165 PHE PHE A . n A 1 163 GLY 163 166 166 GLY GLY A . n A 1 164 PHE 164 167 167 PHE PHE A . n A 1 165 THR 165 168 168 THR THR A . n A 1 166 GLU 166 169 169 GLU GLU A . n A 1 167 VAL 167 170 170 VAL VAL A . n A 1 168 LEU 168 171 171 LEU LEU A . n A 1 169 PHE 169 172 ? ? ? A . n A 1 170 PRO 170 173 ? ? ? A . n B 1 1 ILE 1 4 4 ILE ILE B . n B 1 2 ARG 2 5 5 ARG ARG B . n B 1 3 GLU 3 6 6 GLU GLU B . n B 1 4 ILE 4 7 7 ILE ILE B . n B 1 5 LEU 5 8 8 LEU LEU B . n B 1 6 LYS 6 9 9 LYS LYS B . n B 1 7 MET 7 10 10 MET MET B . n B 1 8 GLY 8 11 11 GLY GLY B . n B 1 9 ASP 9 12 12 ASP ASP B . n B 1 10 GLU 10 13 13 GLU GLU B . n B 1 11 ARG 11 14 14 ARG ARG B . n B 1 12 LEU 12 15 15 LEU LEU B . n B 1 13 LEU 13 16 16 LEU LEU B . n B 1 14 ARG 14 17 17 ARG ARG B . n B 1 15 ILE 15 18 18 ILE ILE B . n B 1 16 ALA 16 19 19 ALA ALA B . n B 1 17 GLN 17 20 20 GLN GLN B . n B 1 18 PRO 18 21 21 PRO PRO B . n B 1 19 VAL 19 22 22 VAL VAL B . n B 1 20 PRO 20 23 23 PRO PRO B . n B 1 21 SER 21 24 24 SER SER B . n B 1 22 GLU 22 25 25 GLU GLU B . n B 1 23 LEU 23 26 26 LEU LEU B . n B 1 24 LEU 24 27 27 LEU LEU B . n B 1 25 GLY 25 28 28 GLY GLY B . n B 1 26 SER 26 29 29 SER SER B . n B 1 27 GLU 27 30 30 GLU GLU B . n B 1 28 GLU 28 31 31 GLU GLU B . n B 1 29 LEU 29 32 32 LEU LEU B . n B 1 30 GLN 30 33 33 GLN GLN B . n B 1 31 ARG 31 34 34 ARG ARG B . n B 1 32 LEU 32 35 35 LEU LEU B . n B 1 33 ILE 33 36 36 ILE ILE B . n B 1 34 ASP 34 37 37 ASP ASP B . n B 1 35 ASP 35 38 38 ASP ASP B . n B 1 36 MET 36 39 39 MET MET B . n B 1 37 PHE 37 40 40 PHE PHE B . n B 1 38 GLU 38 41 41 GLU GLU B . n B 1 39 THR 39 42 42 THR THR B . n B 1 40 MET 40 43 43 MET MET B . n B 1 41 HIS 41 44 44 HIS HIS B . n B 1 42 HIS 42 45 45 HIS HIS B . n B 1 43 VAL 43 46 46 VAL VAL B . n B 1 44 GLY 44 47 47 GLY GLY B . n B 1 45 GLY 45 48 48 GLY GLY B . n B 1 46 VAL 46 49 49 VAL VAL B . n B 1 47 GLY 47 50 50 GLY GLY B . n B 1 48 LEU 48 51 51 LEU LEU B . n B 1 49 ALA 49 52 52 ALA ALA B . n B 1 50 ALA 50 53 53 ALA ALA B . n B 1 51 PRO 51 54 54 PRO PRO B . n B 1 52 GLN 52 55 55 GLN GLN B . n B 1 53 ILE 53 56 56 ILE ILE B . n B 1 54 GLY 54 57 57 GLY GLY B . n B 1 55 VAL 55 58 58 VAL VAL B . n B 1 56 ASP 56 59 59 ASP ASP B . n B 1 57 LEU 57 60 60 LEU LEU B . n B 1 58 GLN 58 61 61 GLN GLN B . n B 1 59 LEU 59 62 62 LEU LEU B . n B 1 60 VAL 60 63 63 VAL VAL B . n B 1 61 ILE 61 64 64 ILE ILE B . n B 1 62 PHE 62 65 65 PHE PHE B . n B 1 63 GLY 63 66 66 GLY GLY B . n B 1 64 PHE 64 67 67 PHE PHE B . n B 1 65 GLU 65 68 68 GLU GLU B . n B 1 66 ARG 66 69 ? ? ? B . n B 1 67 SER 67 70 ? ? ? B . n B 1 68 GLU 68 71 ? ? ? B . n B 1 69 ARG 69 72 ? ? ? B . n B 1 70 TYR 70 73 ? ? ? B . n B 1 71 PRO 71 74 ? ? ? B . n B 1 72 ASP 72 75 ? ? ? B . n B 1 73 ALA 73 76 ? ? ? B . n B 1 74 PRO 74 77 77 PRO PRO B . n B 1 75 ALA 75 78 78 ALA ALA B . n B 1 76 VAL 76 79 79 VAL VAL B . n B 1 77 PRO 77 80 80 PRO PRO B . n B 1 78 PRO 78 81 81 PRO PRO B . n B 1 79 THR 79 82 82 THR THR B . n B 1 80 ILE 80 83 83 ILE ILE B . n B 1 81 LEU 81 84 84 LEU LEU B . n B 1 82 LEU 82 85 85 LEU LEU B . n B 1 83 ASN 83 86 86 ASN ASN B . n B 1 84 PRO 84 87 87 PRO PRO B . n B 1 85 ARG 85 88 88 ARG ARG B . n B 1 86 ILE 86 89 89 ILE ILE B . n B 1 87 THR 87 90 90 THR THR B . n B 1 88 PRO 88 91 91 PRO PRO B . n B 1 89 LEU 89 92 92 LEU LEU B . n B 1 90 ASP 90 93 93 ASP ASP B . n B 1 91 ASP 91 94 94 ASP ASP B . n B 1 92 GLU 92 95 95 GLU GLU B . n B 1 93 MET 93 96 96 MET MET B . n B 1 94 GLU 94 97 97 GLU GLU B . n B 1 95 GLU 95 98 98 GLU GLU B . n B 1 96 GLY 96 99 99 GLY GLY B . n B 1 97 TRP 97 100 100 TRP TRP B . n B 1 98 GLU 98 101 101 GLU GLU B . n B 1 99 GLY 99 102 102 GLY GLY B . n B 1 100 CYS 100 103 103 CYS CYS B . n B 1 101 LEU 101 104 104 LEU LEU B . n B 1 102 SER 102 105 105 SER SER B . n B 1 103 VAL 103 106 106 VAL VAL B . n B 1 104 PRO 104 107 107 PRO PRO B . n B 1 105 GLY 105 108 108 GLY GLY B . n B 1 106 LEU 106 109 109 LEU LEU B . n B 1 107 ARG 107 110 110 ARG ARG B . n B 1 108 GLY 108 111 111 GLY GLY B . n B 1 109 ALA 109 112 112 ALA ALA B . n B 1 110 VAL 110 113 113 VAL VAL B . n B 1 111 SER 111 114 114 SER SER B . n B 1 112 ARG 112 115 115 ARG ARG B . n B 1 113 HIS 113 116 116 HIS HIS B . n B 1 114 ARG 114 117 117 ARG ARG B . n B 1 115 ARG 115 118 118 ARG ARG B . n B 1 116 ILE 116 119 119 ILE ILE B . n B 1 117 ARG 117 120 120 ARG ARG B . n B 1 118 TYR 118 121 121 TYR TYR B . n B 1 119 GLN 119 122 122 GLN GLN B . n B 1 120 GLY 120 123 123 GLY GLY B . n B 1 121 LEU 121 124 124 LEU LEU B . n B 1 122 ASP 122 125 125 ASP ASP B . n B 1 123 PRO 123 126 126 PRO PRO B . n B 1 124 GLN 124 127 127 GLN GLN B . n B 1 125 GLY 125 128 128 GLY GLY B . n B 1 126 GLN 126 129 129 GLN GLN B . n B 1 127 PRO 127 130 130 PRO PRO B . n B 1 128 ILE 128 131 131 ILE ILE B . n B 1 129 ASP 129 132 132 ASP ASP B . n B 1 130 ARG 130 133 133 ARG ARG B . n B 1 131 SER 131 134 134 SER SER B . n B 1 132 VAL 132 135 135 VAL VAL B . n B 1 133 GLU 133 136 136 GLU GLU B . n B 1 134 GLY 134 137 137 GLY GLY B . n B 1 135 PHE 135 138 138 PHE PHE B . n B 1 136 HIS 136 139 139 HIS HIS B . n B 1 137 ALA 137 140 140 ALA ALA B . n B 1 138 ARG 138 141 141 ARG ARG B . n B 1 139 VAL 139 142 142 VAL VAL B . n B 1 140 VAL 140 143 143 VAL VAL B . n B 1 141 GLN 141 144 144 GLN GLN B . n B 1 142 HIS 142 145 145 HIS HIS B . n B 1 143 GLU 143 146 146 GLU GLU B . n B 1 144 CYS 144 147 147 CYS CYS B . n B 1 145 ASP 145 148 148 ASP ASP B . n B 1 146 HIS 146 149 149 HIS HIS B . n B 1 147 LEU 147 150 150 LEU LEU B . n B 1 148 ILE 148 151 151 ILE ILE B . n B 1 149 GLY 149 152 152 GLY GLY B . n B 1 150 ARG 150 153 153 ARG ARG B . n B 1 151 LEU 151 154 154 LEU LEU B . n B 1 152 TYR 152 155 155 TYR TYR B . n B 1 153 PRO 153 156 156 PRO PRO B . n B 1 154 SER 154 157 157 SER SER B . n B 1 155 ARG 155 158 158 ARG ARG B . n B 1 156 ILE 156 159 159 ILE ILE B . n B 1 157 THR 157 160 160 THR THR B . n B 1 158 ASP 158 161 161 ASP ASP B . n B 1 159 PHE 159 162 162 PHE PHE B . n B 1 160 SER 160 163 163 SER SER B . n B 1 161 LYS 161 164 164 LYS LYS B . n B 1 162 PHE 162 165 165 PHE PHE B . n B 1 163 GLY 163 166 166 GLY GLY B . n B 1 164 PHE 164 167 167 PHE PHE B . n B 1 165 THR 165 168 168 THR THR B . n B 1 166 GLU 166 169 169 GLU GLU B . n B 1 167 VAL 167 170 170 VAL VAL B . n B 1 168 LEU 168 171 171 LEU LEU B . n B 1 169 PHE 169 172 172 PHE PHE B . n B 1 170 PRO 170 173 173 PRO PRO B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NI 1 201 1 NI NI A . D 2 NI 1 201 2 NI NI B . E 3 GOL 1 202 1 GOL GOL B . F 4 HOH 1 301 16 HOH HOH A . F 4 HOH 2 302 3 HOH HOH A . F 4 HOH 3 303 26 HOH HOH A . F 4 HOH 4 304 27 HOH HOH A . F 4 HOH 5 305 32 HOH HOH A . F 4 HOH 6 306 44 HOH HOH A . F 4 HOH 7 307 49 HOH HOH A . F 4 HOH 8 308 64 HOH HOH A . F 4 HOH 9 309 8 HOH HOH A . F 4 HOH 10 310 58 HOH HOH A . F 4 HOH 11 311 59 HOH HOH A . F 4 HOH 12 312 25 HOH HOH A . F 4 HOH 13 313 52 HOH HOH A . F 4 HOH 14 314 20 HOH HOH A . F 4 HOH 15 315 36 HOH HOH A . F 4 HOH 16 316 9 HOH HOH A . F 4 HOH 17 317 34 HOH HOH A . F 4 HOH 18 318 39 HOH HOH A . F 4 HOH 19 319 4 HOH HOH A . F 4 HOH 20 320 62 HOH HOH A . F 4 HOH 21 321 22 HOH HOH A . F 4 HOH 22 322 19 HOH HOH A . F 4 HOH 23 323 61 HOH HOH A . F 4 HOH 24 324 55 HOH HOH A . F 4 HOH 25 325 38 HOH HOH A . F 4 HOH 26 326 15 HOH HOH A . F 4 HOH 27 327 30 HOH HOH A . F 4 HOH 28 328 53 HOH HOH A . F 4 HOH 29 329 57 HOH HOH A . F 4 HOH 30 330 45 HOH HOH A . F 4 HOH 31 331 2 HOH HOH A . G 4 HOH 1 301 54 HOH HOH B . G 4 HOH 2 302 14 HOH HOH B . G 4 HOH 3 303 65 HOH HOH B . G 4 HOH 4 304 5 HOH HOH B . G 4 HOH 5 305 21 HOH HOH B . G 4 HOH 6 306 24 HOH HOH B . G 4 HOH 7 307 11 HOH HOH B . G 4 HOH 8 308 37 HOH HOH B . G 4 HOH 9 309 46 HOH HOH B . G 4 HOH 10 310 29 HOH HOH B . G 4 HOH 11 311 35 HOH HOH B . G 4 HOH 12 312 23 HOH HOH B . G 4 HOH 13 313 47 HOH HOH B . G 4 HOH 14 314 10 HOH HOH B . G 4 HOH 15 315 12 HOH HOH B . G 4 HOH 16 316 63 HOH HOH B . G 4 HOH 17 317 28 HOH HOH B . G 4 HOH 18 318 7 HOH HOH B . G 4 HOH 19 319 6 HOH HOH B . G 4 HOH 20 320 40 HOH HOH B . G 4 HOH 21 321 43 HOH HOH B . G 4 HOH 22 322 50 HOH HOH B . G 4 HOH 23 323 31 HOH HOH B . G 4 HOH 24 324 18 HOH HOH B . G 4 HOH 25 325 33 HOH HOH B . G 4 HOH 26 326 48 HOH HOH B . G 4 HOH 27 327 1 HOH HOH B . G 4 HOH 28 328 42 HOH HOH B . G 4 HOH 29 329 56 HOH HOH B . G 4 HOH 30 330 17 HOH HOH B . G 4 HOH 31 331 13 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,F 2 1 B,D,E,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 120 ? 1 MORE -11 ? 1 'SSA (A^2)' 8320 ? 2 'ABSA (A^2)' 120 ? 2 MORE -11 ? 2 'SSA (A^2)' 8770 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 100 ? A CYS 103 ? 1_555 NI ? C NI . ? A NI 201 ? 1_555 NE2 ? A HIS 142 ? A HIS 145 ? 1_555 124.0 ? 2 SG ? A CYS 100 ? A CYS 103 ? 1_555 NI ? C NI . ? A NI 201 ? 1_555 NE2 ? A HIS 146 ? A HIS 149 ? 1_555 111.8 ? 3 NE2 ? A HIS 142 ? A HIS 145 ? 1_555 NI ? C NI . ? A NI 201 ? 1_555 NE2 ? A HIS 146 ? A HIS 149 ? 1_555 105.4 ? 4 SG ? B CYS 100 ? B CYS 103 ? 1_555 NI ? D NI . ? B NI 201 ? 1_555 NE2 ? B HIS 142 ? B HIS 145 ? 1_555 113.5 ? 5 SG ? B CYS 100 ? B CYS 103 ? 1_555 NI ? D NI . ? B NI 201 ? 1_555 NE2 ? B HIS 146 ? B HIS 149 ? 1_555 108.4 ? 6 NE2 ? B HIS 142 ? B HIS 145 ? 1_555 NI ? D NI . ? B NI 201 ? 1_555 NE2 ? B HIS 146 ? B HIS 149 ? 1_555 110.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-02-12 2 'Structure model' 1 1 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0238 2 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 34 ? ? CZ A ARG 34 ? ? NH1 A ARG 34 ? ? 124.69 120.30 4.39 0.50 N 2 1 NE A ARG 34 ? ? CZ A ARG 34 ? ? NH2 A ARG 34 ? ? 115.99 120.30 -4.31 0.50 N 3 1 CB A LEU 35 ? ? CG A LEU 35 ? ? CD2 A LEU 35 ? ? 125.16 111.00 14.16 1.70 N 4 1 CB A ASP 125 ? ? CG A ASP 125 ? ? OD1 A ASP 125 ? ? 125.68 118.30 7.38 0.90 N 5 1 NE B ARG 110 ? ? CZ B ARG 110 ? ? NH1 B ARG 110 ? ? 123.41 120.30 3.11 0.50 N # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id TYR _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 121 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.067 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 17 ? CG ? A ARG 14 CG 2 1 Y 1 A ARG 17 ? CD ? A ARG 14 CD 3 1 Y 1 A ARG 17 ? NE ? A ARG 14 NE 4 1 Y 1 A ARG 17 ? CZ ? A ARG 14 CZ 5 1 Y 1 A ARG 17 ? NH1 ? A ARG 14 NH1 6 1 Y 1 A ARG 17 ? NH2 ? A ARG 14 NH2 7 1 Y 1 A PHE 67 ? CG ? A PHE 64 CG 8 1 Y 1 A PHE 67 ? CD1 ? A PHE 64 CD1 9 1 Y 1 A PHE 67 ? CD2 ? A PHE 64 CD2 10 1 Y 1 A PHE 67 ? CE1 ? A PHE 64 CE1 11 1 Y 1 A PHE 67 ? CE2 ? A PHE 64 CE2 12 1 Y 1 A PHE 67 ? CZ ? A PHE 64 CZ 13 1 Y 1 B GLU 68 ? CG ? B GLU 65 CG 14 1 Y 1 B GLU 68 ? CD ? B GLU 65 CD 15 1 Y 1 B GLU 68 ? OE1 ? B GLU 65 OE1 16 1 Y 1 B GLU 68 ? OE2 ? B GLU 65 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 68 ? A GLU 65 2 1 Y 1 A ARG 69 ? A ARG 66 3 1 Y 1 A SER 70 ? A SER 67 4 1 Y 1 A GLU 71 ? A GLU 68 5 1 Y 1 A ARG 72 ? A ARG 69 6 1 Y 1 A TYR 73 ? A TYR 70 7 1 Y 1 A PRO 74 ? A PRO 71 8 1 Y 1 A ASP 75 ? A ASP 72 9 1 Y 1 A ALA 76 ? A ALA 73 10 1 Y 1 A PHE 172 ? A PHE 169 11 1 Y 1 A PRO 173 ? A PRO 170 12 1 Y 1 B ARG 69 ? B ARG 66 13 1 Y 1 B SER 70 ? B SER 67 14 1 Y 1 B GLU 71 ? B GLU 68 15 1 Y 1 B ARG 72 ? B ARG 69 16 1 Y 1 B TYR 73 ? B TYR 70 17 1 Y 1 B PRO 74 ? B PRO 71 18 1 Y 1 B ASP 75 ? B ASP 72 19 1 Y 1 B ALA 76 ? B ALA 73 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GOL C1 C N N 137 GOL O1 O N N 138 GOL C2 C N N 139 GOL O2 O N N 140 GOL C3 C N N 141 GOL O3 O N N 142 GOL H11 H N N 143 GOL H12 H N N 144 GOL HO1 H N N 145 GOL H2 H N N 146 GOL HO2 H N N 147 GOL H31 H N N 148 GOL H32 H N N 149 GOL HO3 H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 LEU N N N N 197 LEU CA C N S 198 LEU C C N N 199 LEU O O N N 200 LEU CB C N N 201 LEU CG C N N 202 LEU CD1 C N N 203 LEU CD2 C N N 204 LEU OXT O N N 205 LEU H H N N 206 LEU H2 H N N 207 LEU HA H N N 208 LEU HB2 H N N 209 LEU HB3 H N N 210 LEU HG H N N 211 LEU HD11 H N N 212 LEU HD12 H N N 213 LEU HD13 H N N 214 LEU HD21 H N N 215 LEU HD22 H N N 216 LEU HD23 H N N 217 LEU HXT H N N 218 LYS N N N N 219 LYS CA C N S 220 LYS C C N N 221 LYS O O N N 222 LYS CB C N N 223 LYS CG C N N 224 LYS CD C N N 225 LYS CE C N N 226 LYS NZ N N N 227 LYS OXT O N N 228 LYS H H N N 229 LYS H2 H N N 230 LYS HA H N N 231 LYS HB2 H N N 232 LYS HB3 H N N 233 LYS HG2 H N N 234 LYS HG3 H N N 235 LYS HD2 H N N 236 LYS HD3 H N N 237 LYS HE2 H N N 238 LYS HE3 H N N 239 LYS HZ1 H N N 240 LYS HZ2 H N N 241 LYS HZ3 H N N 242 LYS HXT H N N 243 MET N N N N 244 MET CA C N S 245 MET C C N N 246 MET O O N N 247 MET CB C N N 248 MET CG C N N 249 MET SD S N N 250 MET CE C N N 251 MET OXT O N N 252 MET H H N N 253 MET H2 H N N 254 MET HA H N N 255 MET HB2 H N N 256 MET HB3 H N N 257 MET HG2 H N N 258 MET HG3 H N N 259 MET HE1 H N N 260 MET HE2 H N N 261 MET HE3 H N N 262 MET HXT H N N 263 NI NI NI N N 264 PHE N N N N 265 PHE CA C N S 266 PHE C C N N 267 PHE O O N N 268 PHE CB C N N 269 PHE CG C Y N 270 PHE CD1 C Y N 271 PHE CD2 C Y N 272 PHE CE1 C Y N 273 PHE CE2 C Y N 274 PHE CZ C Y N 275 PHE OXT O N N 276 PHE H H N N 277 PHE H2 H N N 278 PHE HA H N N 279 PHE HB2 H N N 280 PHE HB3 H N N 281 PHE HD1 H N N 282 PHE HD2 H N N 283 PHE HE1 H N N 284 PHE HE2 H N N 285 PHE HZ H N N 286 PHE HXT H N N 287 PRO N N N N 288 PRO CA C N S 289 PRO C C N N 290 PRO O O N N 291 PRO CB C N N 292 PRO CG C N N 293 PRO CD C N N 294 PRO OXT O N N 295 PRO H H N N 296 PRO HA H N N 297 PRO HB2 H N N 298 PRO HB3 H N N 299 PRO HG2 H N N 300 PRO HG3 H N N 301 PRO HD2 H N N 302 PRO HD3 H N N 303 PRO HXT H N N 304 SER N N N N 305 SER CA C N S 306 SER C C N N 307 SER O O N N 308 SER CB C N N 309 SER OG O N N 310 SER OXT O N N 311 SER H H N N 312 SER H2 H N N 313 SER HA H N N 314 SER HB2 H N N 315 SER HB3 H N N 316 SER HG H N N 317 SER HXT H N N 318 THR N N N N 319 THR CA C N S 320 THR C C N N 321 THR O O N N 322 THR CB C N R 323 THR OG1 O N N 324 THR CG2 C N N 325 THR OXT O N N 326 THR H H N N 327 THR H2 H N N 328 THR HA H N N 329 THR HB H N N 330 THR HG1 H N N 331 THR HG21 H N N 332 THR HG22 H N N 333 THR HG23 H N N 334 THR HXT H N N 335 TRP N N N N 336 TRP CA C N S 337 TRP C C N N 338 TRP O O N N 339 TRP CB C N N 340 TRP CG C Y N 341 TRP CD1 C Y N 342 TRP CD2 C Y N 343 TRP NE1 N Y N 344 TRP CE2 C Y N 345 TRP CE3 C Y N 346 TRP CZ2 C Y N 347 TRP CZ3 C Y N 348 TRP CH2 C Y N 349 TRP OXT O N N 350 TRP H H N N 351 TRP H2 H N N 352 TRP HA H N N 353 TRP HB2 H N N 354 TRP HB3 H N N 355 TRP HD1 H N N 356 TRP HE1 H N N 357 TRP HE3 H N N 358 TRP HZ2 H N N 359 TRP HZ3 H N N 360 TRP HH2 H N N 361 TRP HXT H N N 362 TYR N N N N 363 TYR CA C N S 364 TYR C C N N 365 TYR O O N N 366 TYR CB C N N 367 TYR CG C Y N 368 TYR CD1 C Y N 369 TYR CD2 C Y N 370 TYR CE1 C Y N 371 TYR CE2 C Y N 372 TYR CZ C Y N 373 TYR OH O N N 374 TYR OXT O N N 375 TYR H H N N 376 TYR H2 H N N 377 TYR HA H N N 378 TYR HB2 H N N 379 TYR HB3 H N N 380 TYR HD1 H N N 381 TYR HD2 H N N 382 TYR HE1 H N N 383 TYR HE2 H N N 384 TYR HH H N N 385 TYR HXT H N N 386 VAL N N N N 387 VAL CA C N S 388 VAL C C N N 389 VAL O O N N 390 VAL CB C N N 391 VAL CG1 C N N 392 VAL CG2 C N N 393 VAL OXT O N N 394 VAL H H N N 395 VAL H2 H N N 396 VAL HA H N N 397 VAL HB H N N 398 VAL HG11 H N N 399 VAL HG12 H N N 400 VAL HG13 H N N 401 VAL HG21 H N N 402 VAL HG22 H N N 403 VAL HG23 H N N 404 VAL HXT H N N 405 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 MET N CA sing N N 231 MET N H sing N N 232 MET N H2 sing N N 233 MET CA C sing N N 234 MET CA CB sing N N 235 MET CA HA sing N N 236 MET C O doub N N 237 MET C OXT sing N N 238 MET CB CG sing N N 239 MET CB HB2 sing N N 240 MET CB HB3 sing N N 241 MET CG SD sing N N 242 MET CG HG2 sing N N 243 MET CG HG3 sing N N 244 MET SD CE sing N N 245 MET CE HE1 sing N N 246 MET CE HE2 sing N N 247 MET CE HE3 sing N N 248 MET OXT HXT sing N N 249 PHE N CA sing N N 250 PHE N H sing N N 251 PHE N H2 sing N N 252 PHE CA C sing N N 253 PHE CA CB sing N N 254 PHE CA HA sing N N 255 PHE C O doub N N 256 PHE C OXT sing N N 257 PHE CB CG sing N N 258 PHE CB HB2 sing N N 259 PHE CB HB3 sing N N 260 PHE CG CD1 doub Y N 261 PHE CG CD2 sing Y N 262 PHE CD1 CE1 sing Y N 263 PHE CD1 HD1 sing N N 264 PHE CD2 CE2 doub Y N 265 PHE CD2 HD2 sing N N 266 PHE CE1 CZ doub Y N 267 PHE CE1 HE1 sing N N 268 PHE CE2 CZ sing Y N 269 PHE CE2 HE2 sing N N 270 PHE CZ HZ sing N N 271 PHE OXT HXT sing N N 272 PRO N CA sing N N 273 PRO N CD sing N N 274 PRO N H sing N N 275 PRO CA C sing N N 276 PRO CA CB sing N N 277 PRO CA HA sing N N 278 PRO C O doub N N 279 PRO C OXT sing N N 280 PRO CB CG sing N N 281 PRO CB HB2 sing N N 282 PRO CB HB3 sing N N 283 PRO CG CD sing N N 284 PRO CG HG2 sing N N 285 PRO CG HG3 sing N N 286 PRO CD HD2 sing N N 287 PRO CD HD3 sing N N 288 PRO OXT HXT sing N N 289 SER N CA sing N N 290 SER N H sing N N 291 SER N H2 sing N N 292 SER CA C sing N N 293 SER CA CB sing N N 294 SER CA HA sing N N 295 SER C O doub N N 296 SER C OXT sing N N 297 SER CB OG sing N N 298 SER CB HB2 sing N N 299 SER CB HB3 sing N N 300 SER OG HG sing N N 301 SER OXT HXT sing N N 302 THR N CA sing N N 303 THR N H sing N N 304 THR N H2 sing N N 305 THR CA C sing N N 306 THR CA CB sing N N 307 THR CA HA sing N N 308 THR C O doub N N 309 THR C OXT sing N N 310 THR CB OG1 sing N N 311 THR CB CG2 sing N N 312 THR CB HB sing N N 313 THR OG1 HG1 sing N N 314 THR CG2 HG21 sing N N 315 THR CG2 HG22 sing N N 316 THR CG2 HG23 sing N N 317 THR OXT HXT sing N N 318 TRP N CA sing N N 319 TRP N H sing N N 320 TRP N H2 sing N N 321 TRP CA C sing N N 322 TRP CA CB sing N N 323 TRP CA HA sing N N 324 TRP C O doub N N 325 TRP C OXT sing N N 326 TRP CB CG sing N N 327 TRP CB HB2 sing N N 328 TRP CB HB3 sing N N 329 TRP CG CD1 doub Y N 330 TRP CG CD2 sing Y N 331 TRP CD1 NE1 sing Y N 332 TRP CD1 HD1 sing N N 333 TRP CD2 CE2 doub Y N 334 TRP CD2 CE3 sing Y N 335 TRP NE1 CE2 sing Y N 336 TRP NE1 HE1 sing N N 337 TRP CE2 CZ2 sing Y N 338 TRP CE3 CZ3 doub Y N 339 TRP CE3 HE3 sing N N 340 TRP CZ2 CH2 doub Y N 341 TRP CZ2 HZ2 sing N N 342 TRP CZ3 CH2 sing Y N 343 TRP CZ3 HZ3 sing N N 344 TRP CH2 HH2 sing N N 345 TRP OXT HXT sing N N 346 TYR N CA sing N N 347 TYR N H sing N N 348 TYR N H2 sing N N 349 TYR CA C sing N N 350 TYR CA CB sing N N 351 TYR CA HA sing N N 352 TYR C O doub N N 353 TYR C OXT sing N N 354 TYR CB CG sing N N 355 TYR CB HB2 sing N N 356 TYR CB HB3 sing N N 357 TYR CG CD1 doub Y N 358 TYR CG CD2 sing Y N 359 TYR CD1 CE1 sing Y N 360 TYR CD1 HD1 sing N N 361 TYR CD2 CE2 doub Y N 362 TYR CD2 HD2 sing N N 363 TYR CE1 CZ doub Y N 364 TYR CE1 HE1 sing N N 365 TYR CE2 CZ sing Y N 366 TYR CE2 HE2 sing N N 367 TYR CZ OH sing N N 368 TYR OH HH sing N N 369 TYR OXT HXT sing N N 370 VAL N CA sing N N 371 VAL N H sing N N 372 VAL N H2 sing N N 373 VAL CA C sing N N 374 VAL CA CB sing N N 375 VAL CA HA sing N N 376 VAL C O doub N N 377 VAL C OXT sing N N 378 VAL CB CG1 sing N N 379 VAL CB CG2 sing N N 380 VAL CB HB sing N N 381 VAL CG1 HG11 sing N N 382 VAL CG1 HG12 sing N N 383 VAL CG1 HG13 sing N N 384 VAL CG2 HG21 sing N N 385 VAL CG2 HG22 sing N N 386 VAL CG2 HG23 sing N N 387 VAL OXT HXT sing N N 388 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NICKEL (II) ION' NI 3 GLYCEROL GOL 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5VCP _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #