data_6KHU # _entry.id 6KHU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6KHU WWPDB D_1300013014 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6KHU _pdbx_database_status.recvd_initial_deposition_date 2019-07-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Been, K.W.' 1 0000-0002-6946-2188 'Yoon, H.J.' 2 0000-0003-4724-4208 'Lee, H.H.' 3 0000-0003-1168-2484 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal structure of a DGC protein from Thermotoga maritima' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Been, K.W.' 1 0000-0002-6946-2188 primary 'Yoon, H.J.' 2 0000-0003-4724-4208 primary 'Lee, H.H.' 3 0000-0003-1168-2484 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6KHU _cell.details ? _cell.formula_units_Z ? _cell.length_a 61.303 _cell.length_a_esd ? _cell.length_b 61.303 _cell.length_b_esd ? _cell.length_c 101.143 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6KHU _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Diguanylate cyclase/phosphodiesterase-domain containing protein' 15221.165 1 ? ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 3 water nat water 18.015 88 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;DPLTRVYAKDHFLRLLSYQHQRAFEENTPYTIFFVKTKVSKNEREKAL(MSE)KIGKILKECVRVPLDSVGRYSDDTFAL FVIGVGKETAPNIEERIKNHIESIGGIEYSIAYKSYPEDF(MSE)DLEKAILDLEKAVA ; _entity_poly.pdbx_seq_one_letter_code_can ;DPLTRVYAKDHFLRLLSYQHQRAFEENTPYTIFFVKTKVSKNEREKALMKIGKILKECVRVPLDSVGRYSDDTFALFVIG VGKETAPNIEERIKNHIESIGGIEYSIAYKSYPEDFMDLEKAILDLEKAVA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 PRO n 1 3 LEU n 1 4 THR n 1 5 ARG n 1 6 VAL n 1 7 TYR n 1 8 ALA n 1 9 LYS n 1 10 ASP n 1 11 HIS n 1 12 PHE n 1 13 LEU n 1 14 ARG n 1 15 LEU n 1 16 LEU n 1 17 SER n 1 18 TYR n 1 19 GLN n 1 20 HIS n 1 21 GLN n 1 22 ARG n 1 23 ALA n 1 24 PHE n 1 25 GLU n 1 26 GLU n 1 27 ASN n 1 28 THR n 1 29 PRO n 1 30 TYR n 1 31 THR n 1 32 ILE n 1 33 PHE n 1 34 PHE n 1 35 VAL n 1 36 LYS n 1 37 THR n 1 38 LYS n 1 39 VAL n 1 40 SER n 1 41 LYS n 1 42 ASN n 1 43 GLU n 1 44 ARG n 1 45 GLU n 1 46 LYS n 1 47 ALA n 1 48 LEU n 1 49 MSE n 1 50 LYS n 1 51 ILE n 1 52 GLY n 1 53 LYS n 1 54 ILE n 1 55 LEU n 1 56 LYS n 1 57 GLU n 1 58 CYS n 1 59 VAL n 1 60 ARG n 1 61 VAL n 1 62 PRO n 1 63 LEU n 1 64 ASP n 1 65 SER n 1 66 VAL n 1 67 GLY n 1 68 ARG n 1 69 TYR n 1 70 SER n 1 71 ASP n 1 72 ASP n 1 73 THR n 1 74 PHE n 1 75 ALA n 1 76 LEU n 1 77 PHE n 1 78 VAL n 1 79 ILE n 1 80 GLY n 1 81 VAL n 1 82 GLY n 1 83 LYS n 1 84 GLU n 1 85 THR n 1 86 ALA n 1 87 PRO n 1 88 ASN n 1 89 ILE n 1 90 GLU n 1 91 GLU n 1 92 ARG n 1 93 ILE n 1 94 LYS n 1 95 ASN n 1 96 HIS n 1 97 ILE n 1 98 GLU n 1 99 SER n 1 100 ILE n 1 101 GLY n 1 102 GLY n 1 103 ILE n 1 104 GLU n 1 105 TYR n 1 106 SER n 1 107 ILE n 1 108 ALA n 1 109 TYR n 1 110 LYS n 1 111 SER n 1 112 TYR n 1 113 PRO n 1 114 GLU n 1 115 ASP n 1 116 PHE n 1 117 MSE n 1 118 ASP n 1 119 LEU n 1 120 GLU n 1 121 LYS n 1 122 ALA n 1 123 ILE n 1 124 LEU n 1 125 ASP n 1 126 LEU n 1 127 GLU n 1 128 LYS n 1 129 ALA n 1 130 VAL n 1 131 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 131 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermotoga maritima MSB8' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 243274 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant star _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pHis2 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code R4NMR2_THEMA _struct_ref.pdbx_db_accession R4NMR2 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DPLTRVYAKDHFLRLLSYQHQRAFEENTPYTIFFVKTKVSKNEREKALMKIGKILKECVRVPLDSVGRYSDDTFALFVIG VGKETAPNIEERIKNHIESIGGIEYSIAYKSYPEDFMDLEKAILDLEKAVA ; _struct_ref.pdbx_align_begin 60 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6KHU _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 131 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession R4NMR2 _struct_ref_seq.db_align_beg 60 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 190 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 60 _struct_ref_seq.pdbx_auth_seq_align_end 190 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6KHU _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.14 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 60.84 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'PEG 3000, trisodium citrate, Zinc acetate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'BRUKER SMART 6500' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2012-11-16 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9789 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL44XU' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9789 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL44XU _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate 19.350 _reflns.entry_id 6KHU _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.0980 _reflns.d_resolution_low 30.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 21596 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.900 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 14.500 _reflns.pdbx_Rmerge_I_obs 0.102 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.600 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.783 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.100 2.140 ? ? ? ? ? ? 1087 99.900 ? ? ? ? 0.454 ? ? ? ? ? ? ? ? 14.700 ? 1.542 ? ? ? ? ? 1 1 ? ? 2.140 2.180 ? ? ? ? ? ? 1081 99.900 ? ? ? ? 0.431 ? ? ? ? ? ? ? ? 14.700 ? 1.664 ? ? ? ? ? 2 1 ? ? 2.180 2.220 ? ? ? ? ? ? 1086 99.900 ? ? ? ? 0.495 ? ? ? ? ? ? ? ? 14.600 ? 1.840 ? ? ? ? ? 3 1 ? ? 2.220 2.260 ? ? ? ? ? ? 1067 99.900 ? ? ? ? 0.302 ? ? ? ? ? ? ? ? 14.500 ? 2.463 ? ? ? ? ? 4 1 ? ? 2.260 2.310 ? ? ? ? ? ? 1079 99.900 ? ? ? ? 0.296 ? ? ? ? ? ? ? ? 14.600 ? 1.763 ? ? ? ? ? 5 1 ? ? 2.310 2.370 ? ? ? ? ? ? 1104 100.000 ? ? ? ? 0.305 ? ? ? ? ? ? ? ? 14.700 ? 1.766 ? ? ? ? ? 6 1 ? ? 2.370 2.420 ? ? ? ? ? ? 1055 100.000 ? ? ? ? 0.199 ? ? ? ? ? ? ? ? 14.700 ? 1.407 ? ? ? ? ? 7 1 ? ? 2.420 2.490 ? ? ? ? ? ? 1073 100.000 ? ? ? ? 0.179 ? ? ? ? ? ? ? ? 14.800 ? 1.386 ? ? ? ? ? 8 1 ? ? 2.490 2.560 ? ? ? ? ? ? 1100 100.000 ? ? ? ? 0.160 ? ? ? ? ? ? ? ? 14.800 ? 1.404 ? ? ? ? ? 9 1 ? ? 2.560 2.650 ? ? ? ? ? ? 1065 100.000 ? ? ? ? 0.148 ? ? ? ? ? ? ? ? 14.800 ? 1.395 ? ? ? ? ? 10 1 ? ? 2.650 2.740 ? ? ? ? ? ? 1081 100.000 ? ? ? ? 0.119 ? ? ? ? ? ? ? ? 14.800 ? 1.426 ? ? ? ? ? 11 1 ? ? 2.740 2.850 ? ? ? ? ? ? 1069 100.000 ? ? ? ? 0.110 ? ? ? ? ? ? ? ? 14.800 ? 1.419 ? ? ? ? ? 12 1 ? ? 2.850 2.980 ? ? ? ? ? ? 1087 100.000 ? ? ? ? 0.089 ? ? ? ? ? ? ? ? 14.800 ? 1.446 ? ? ? ? ? 13 1 ? ? 2.980 3.140 ? ? ? ? ? ? 1074 100.000 ? ? ? ? 0.076 ? ? ? ? ? ? ? ? 14.900 ? 1.523 ? ? ? ? ? 14 1 ? ? 3.140 3.330 ? ? ? ? ? ? 1087 100.000 ? ? ? ? 0.070 ? ? ? ? ? ? ? ? 14.800 ? 1.717 ? ? ? ? ? 15 1 ? ? 3.330 3.590 ? ? ? ? ? ? 1086 100.000 ? ? ? ? 0.082 ? ? ? ? ? ? ? ? 14.400 ? 2.669 ? ? ? ? ? 16 1 ? ? 3.590 3.950 ? ? ? ? ? ? 1084 100.000 ? ? ? ? 0.077 ? ? ? ? ? ? ? ? 13.400 ? 2.941 ? ? ? ? ? 17 1 ? ? 3.950 4.520 ? ? ? ? ? ? 1061 100.000 ? ? ? ? 0.060 ? ? ? ? ? ? ? ? 13.200 ? 2.948 ? ? ? ? ? 18 1 ? ? 4.520 5.690 ? ? ? ? ? ? 1095 99.800 ? ? ? ? 0.046 ? ? ? ? ? ? ? ? 14.600 ? 1.884 ? ? ? ? ? 19 1 ? ? 5.690 30.000 ? ? ? ? ? ? 1075 98.400 ? ? ? ? 0.030 ? ? ? ? ? ? ? ? 14.300 ? 1.339 ? ? ? ? ? 20 1 ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 68.720 _refine.B_iso_mean 23.4768 _refine.B_iso_min 1.310 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details 'The structure factor file contains friedel pairs in I_PLUS/MINUS columns' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6KHU _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.0980 _refine.ls_d_res_low 29.5420 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 21394 _refine.ls_number_reflns_R_free 2152 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.1700 _refine.ls_percent_reflns_R_free 10.0600 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2001 _refine.ls_R_factor_R_free 0.2376 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1958 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 22.4100 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2000 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.0980 _refine_hist.d_res_low 29.5420 _refine_hist.number_atoms_solvent 88 _refine_hist.number_atoms_total 1155 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 131 _refine_hist.pdbx_B_iso_mean_ligand 18.22 _refine_hist.pdbx_B_iso_mean_solvent 27.09 _refine_hist.pdbx_number_atoms_protein 1065 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 ? 1086 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.847 ? 1462 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.056 ? 162 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 ? 186 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 7.532 ? 665 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.0980 2.1467 . . 142 1315 100.0000 . . . 0.2363 0.0000 0.2018 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1467 2.2003 . . 135 1234 96.0000 . . . 0.2883 0.0000 0.2137 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2003 2.2598 . . 145 1289 100.0000 . . . 0.3097 0.0000 0.2418 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2598 2.3263 . . 139 1254 97.0000 . . . 0.2500 0.0000 0.2074 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3263 2.4013 . . 139 1287 99.0000 . . . 0.2892 0.0000 0.2118 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4013 2.4871 . . 145 1279 100.0000 . . . 0.2457 0.0000 0.1919 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4871 2.5866 . . 148 1297 100.0000 . . . 0.2137 0.0000 0.1989 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5866 2.7043 . . 140 1299 100.0000 . . . 0.2291 0.0000 0.1897 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7043 2.8467 . . 144 1282 100.0000 . . . 0.2438 0.0000 0.1995 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8467 3.0249 . . 145 1295 100.0000 . . . 0.2559 0.0000 0.2043 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0249 3.2582 . . 150 1298 100.0000 . . . 0.2450 0.0000 0.1973 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2582 3.5856 . . 142 1274 98.0000 . . . 0.2520 0.0000 0.2016 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.5856 4.1033 . . 148 1266 99.0000 . . . 0.2086 0.0000 0.1755 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.1033 5.1652 . . 146 1298 100.0000 . . . 0.2018 0.0000 0.1577 . . . . . . . . . . 'X-RAY DIFFRACTION' 5.1652 29.5444 . . 144 1275 98.0000 . . . 0.2173 0.0000 0.2062 . . . . . . . . . . # _struct.entry_id 6KHU _struct.title 'The crystal structure of a DGC protein from Thermotoga maritima' _struct.pdbx_descriptor 'Diguanylate cyclase/phosphodiesterase-domain containing protein' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6KHU _struct_keywords.text 'Putative diguanylate cyclase, CYTOSOLIC PROTEIN' _struct_keywords.pdbx_keywords 'CYTOSOLIC PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 1 ? ARG A 5 ? ASP A 60 ARG A 64 5 ? 5 HELX_P HELX_P2 AA2 LYS A 9 ? ASN A 27 ? LYS A 68 ASN A 86 1 ? 19 HELX_P HELX_P3 AA3 SER A 40 ? CYS A 58 ? SER A 99 CYS A 117 1 ? 19 HELX_P HELX_P4 AA4 THR A 85 ? GLY A 101 ? THR A 144 GLY A 160 1 ? 17 HELX_P HELX_P5 AA5 ASP A 118 ? ALA A 131 ? ASP A 177 ALA A 190 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A LEU 48 C ? ? ? 1_555 A MSE 49 N ? ? A LEU 107 A MSE 108 1_555 ? ? ? ? ? ? ? 1.328 ? covale2 covale both ? A MSE 49 C ? ? ? 1_555 A LYS 50 N ? ? A MSE 108 A LYS 109 1_555 ? ? ? ? ? ? ? 1.340 ? metalc1 metalc ? ? A GLU 57 OE1 ? ? ? 1_555 C ZN . ZN ? ? A GLU 116 A ZN 202 1_555 ? ? ? ? ? ? ? 2.020 ? metalc2 metalc ? ? A HIS 96 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 155 A ZN 202 1_555 ? ? ? ? ? ? ? 2.026 ? covale3 covale both ? A PHE 116 C ? ? ? 1_555 A MSE 117 N ? ? A PHE 175 A MSE 176 1_555 ? ? ? ? ? ? ? 1.326 ? covale4 covale both ? A MSE 117 C ? ? ? 1_555 A ASP 118 N ? ? A MSE 176 A ASP 177 1_555 ? ? ? ? ? ? ? 1.330 ? metalc3 metalc ? ? A ASP 118 OD2 ? ? ? 1_555 B ZN . ZN ? ? A ASP 177 A ZN 201 1_555 ? ? ? ? ? ? ? 1.947 ? metalc4 metalc ? ? B ZN . ZN ? ? ? 1_555 D HOH . O ? ? A ZN 201 A HOH 371 1_555 ? ? ? ? ? ? ? 2.269 ? metalc5 metalc ? ? A HIS 11 ND1 ? ? ? 1_555 B ZN . ZN ? ? A HIS 70 A ZN 201 4_545 ? ? ? ? ? ? ? 2.139 ? metalc6 metalc ? ? A GLU 25 OE1 ? ? ? 1_555 C ZN . ZN ? ? A GLU 84 A ZN 202 6_445 ? ? ? ? ? ? ? 1.993 ? metalc7 metalc ? ? B ZN . ZN ? ? ? 1_555 D HOH . O ? ? A ZN 201 A HOH 361 3_444 ? ? ? ? ? ? ? 2.143 ? metalc8 metalc ? ? C ZN . ZN ? ? ? 1_555 D HOH . O ? ? A ZN 202 A HOH 354 6_545 ? ? ? ? ? ? ? 2.125 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TYR _struct_mon_prot_cis.label_seq_id 112 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TYR _struct_mon_prot_cis.auth_seq_id 171 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 113 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 172 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 2.12 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 7 ? ALA A 8 ? TYR A 66 ALA A 67 AA1 2 SER A 65 ? ARG A 68 ? SER A 124 ARG A 127 AA1 3 THR A 73 ? ILE A 79 ? THR A 132 ILE A 138 AA1 4 TYR A 30 ? THR A 37 ? TYR A 89 THR A 96 AA1 5 TYR A 105 ? TYR A 112 ? TYR A 164 TYR A 171 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N TYR A 7 ? N TYR A 66 O ARG A 68 ? O ARG A 127 AA1 2 3 N GLY A 67 ? N GLY A 126 O ALA A 75 ? O ALA A 134 AA1 3 4 O LEU A 76 ? O LEU A 135 N PHE A 33 ? N PHE A 92 AA1 4 5 N TYR A 30 ? N TYR A 89 O TYR A 112 ? O TYR A 171 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 201 ? 4 'binding site for residue ZN A 201' AC2 Software A ZN 202 ? 4 'binding site for residue ZN A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HIS A 11 ? HIS A 70 . ? 3_444 ? 2 AC1 4 ASP A 118 ? ASP A 177 . ? 1_555 ? 3 AC1 4 HOH D . ? HOH A 361 . ? 3_444 ? 4 AC1 4 HOH D . ? HOH A 371 . ? 1_555 ? 5 AC2 4 GLU A 25 ? GLU A 84 . ? 6_545 ? 6 AC2 4 GLU A 57 ? GLU A 116 . ? 1_555 ? 7 AC2 4 HIS A 96 ? HIS A 155 . ? 1_555 ? 8 AC2 4 HOH D . ? HOH A 354 . ? 6_545 ? # _atom_sites.entry_id 6KHU _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.016312 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016312 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009887 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S SE ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 60 60 ASP ASP A . n A 1 2 PRO 2 61 61 PRO PRO A . n A 1 3 LEU 3 62 62 LEU LEU A . n A 1 4 THR 4 63 63 THR THR A . n A 1 5 ARG 5 64 64 ARG ARG A . n A 1 6 VAL 6 65 65 VAL VAL A . n A 1 7 TYR 7 66 66 TYR TYR A . n A 1 8 ALA 8 67 67 ALA ALA A . n A 1 9 LYS 9 68 68 LYS LYS A . n A 1 10 ASP 10 69 69 ASP ASP A . n A 1 11 HIS 11 70 70 HIS HIS A . n A 1 12 PHE 12 71 71 PHE PHE A . n A 1 13 LEU 13 72 72 LEU LEU A . n A 1 14 ARG 14 73 73 ARG ARG A . n A 1 15 LEU 15 74 74 LEU LEU A . n A 1 16 LEU 16 75 75 LEU LEU A . n A 1 17 SER 17 76 76 SER SER A . n A 1 18 TYR 18 77 77 TYR TYR A . n A 1 19 GLN 19 78 78 GLN GLN A . n A 1 20 HIS 20 79 79 HIS HIS A . n A 1 21 GLN 21 80 80 GLN GLN A . n A 1 22 ARG 22 81 81 ARG ARG A . n A 1 23 ALA 23 82 82 ALA ALA A . n A 1 24 PHE 24 83 83 PHE PHE A . n A 1 25 GLU 25 84 84 GLU GLU A . n A 1 26 GLU 26 85 85 GLU GLU A . n A 1 27 ASN 27 86 86 ASN ASN A . n A 1 28 THR 28 87 87 THR THR A . n A 1 29 PRO 29 88 88 PRO PRO A . n A 1 30 TYR 30 89 89 TYR TYR A . n A 1 31 THR 31 90 90 THR THR A . n A 1 32 ILE 32 91 91 ILE ILE A . n A 1 33 PHE 33 92 92 PHE PHE A . n A 1 34 PHE 34 93 93 PHE PHE A . n A 1 35 VAL 35 94 94 VAL VAL A . n A 1 36 LYS 36 95 95 LYS LYS A . n A 1 37 THR 37 96 96 THR THR A . n A 1 38 LYS 38 97 97 LYS LYS A . n A 1 39 VAL 39 98 98 VAL VAL A . n A 1 40 SER 40 99 99 SER SER A . n A 1 41 LYS 41 100 100 LYS LYS A . n A 1 42 ASN 42 101 101 ASN ASN A . n A 1 43 GLU 43 102 102 GLU GLU A . n A 1 44 ARG 44 103 103 ARG ARG A . n A 1 45 GLU 45 104 104 GLU GLU A . n A 1 46 LYS 46 105 105 LYS LYS A . n A 1 47 ALA 47 106 106 ALA ALA A . n A 1 48 LEU 48 107 107 LEU LEU A . n A 1 49 MSE 49 108 108 MSE MSE A . n A 1 50 LYS 50 109 109 LYS LYS A . n A 1 51 ILE 51 110 110 ILE ILE A . n A 1 52 GLY 52 111 111 GLY GLY A . n A 1 53 LYS 53 112 112 LYS LYS A . n A 1 54 ILE 54 113 113 ILE ILE A . n A 1 55 LEU 55 114 114 LEU LEU A . n A 1 56 LYS 56 115 115 LYS LYS A . n A 1 57 GLU 57 116 116 GLU GLU A . n A 1 58 CYS 58 117 117 CYS CYS A . n A 1 59 VAL 59 118 118 VAL VAL A . n A 1 60 ARG 60 119 119 ARG ARG A . n A 1 61 VAL 61 120 120 VAL VAL A . n A 1 62 PRO 62 121 121 PRO PRO A . n A 1 63 LEU 63 122 122 LEU LEU A . n A 1 64 ASP 64 123 123 ASP ASP A . n A 1 65 SER 65 124 124 SER SER A . n A 1 66 VAL 66 125 125 VAL VAL A . n A 1 67 GLY 67 126 126 GLY GLY A . n A 1 68 ARG 68 127 127 ARG ARG A . n A 1 69 TYR 69 128 128 TYR TYR A . n A 1 70 SER 70 129 129 SER SER A . n A 1 71 ASP 71 130 130 ASP ASP A . n A 1 72 ASP 72 131 131 ASP ASP A . n A 1 73 THR 73 132 132 THR THR A . n A 1 74 PHE 74 133 133 PHE PHE A . n A 1 75 ALA 75 134 134 ALA ALA A . n A 1 76 LEU 76 135 135 LEU LEU A . n A 1 77 PHE 77 136 136 PHE PHE A . n A 1 78 VAL 78 137 137 VAL VAL A . n A 1 79 ILE 79 138 138 ILE ILE A . n A 1 80 GLY 80 139 139 GLY GLY A . n A 1 81 VAL 81 140 140 VAL VAL A . n A 1 82 GLY 82 141 141 GLY GLY A . n A 1 83 LYS 83 142 142 LYS LYS A . n A 1 84 GLU 84 143 143 GLU GLU A . n A 1 85 THR 85 144 144 THR THR A . n A 1 86 ALA 86 145 145 ALA ALA A . n A 1 87 PRO 87 146 146 PRO PRO A . n A 1 88 ASN 88 147 147 ASN ASN A . n A 1 89 ILE 89 148 148 ILE ILE A . n A 1 90 GLU 90 149 149 GLU GLU A . n A 1 91 GLU 91 150 150 GLU GLU A . n A 1 92 ARG 92 151 151 ARG ARG A . n A 1 93 ILE 93 152 152 ILE ILE A . n A 1 94 LYS 94 153 153 LYS LYS A . n A 1 95 ASN 95 154 154 ASN ASN A . n A 1 96 HIS 96 155 155 HIS HIS A . n A 1 97 ILE 97 156 156 ILE ILE A . n A 1 98 GLU 98 157 157 GLU GLU A . n A 1 99 SER 99 158 158 SER SER A . n A 1 100 ILE 100 159 159 ILE ILE A . n A 1 101 GLY 101 160 160 GLY GLY A . n A 1 102 GLY 102 161 161 GLY GLY A . n A 1 103 ILE 103 162 162 ILE ILE A . n A 1 104 GLU 104 163 163 GLU GLU A . n A 1 105 TYR 105 164 164 TYR TYR A . n A 1 106 SER 106 165 165 SER SER A . n A 1 107 ILE 107 166 166 ILE ILE A . n A 1 108 ALA 108 167 167 ALA ALA A . n A 1 109 TYR 109 168 168 TYR TYR A . n A 1 110 LYS 110 169 169 LYS LYS A . n A 1 111 SER 111 170 170 SER SER A . n A 1 112 TYR 112 171 171 TYR TYR A . n A 1 113 PRO 113 172 172 PRO PRO A . n A 1 114 GLU 114 173 173 GLU GLU A . n A 1 115 ASP 115 174 174 ASP ASP A . n A 1 116 PHE 116 175 175 PHE PHE A . n A 1 117 MSE 117 176 176 MSE MSE A . n A 1 118 ASP 118 177 177 ASP ASP A . n A 1 119 LEU 119 178 178 LEU LEU A . n A 1 120 GLU 120 179 179 GLU GLU A . n A 1 121 LYS 121 180 180 LYS LYS A . n A 1 122 ALA 122 181 181 ALA ALA A . n A 1 123 ILE 123 182 182 ILE ILE A . n A 1 124 LEU 124 183 183 LEU LEU A . n A 1 125 ASP 125 184 184 ASP ASP A . n A 1 126 LEU 126 185 185 LEU LEU A . n A 1 127 GLU 127 186 186 GLU GLU A . n A 1 128 LYS 128 187 187 LYS LYS A . n A 1 129 ALA 129 188 188 ALA ALA A . n A 1 130 VAL 130 189 189 VAL VAL A . n A 1 131 ALA 131 190 190 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 201 201 ZN ZN A . C 2 ZN 1 202 202 ZN ZN A . D 3 HOH 1 301 71 HOH HOH A . D 3 HOH 2 302 72 HOH HOH A . D 3 HOH 3 303 29 HOH HOH A . D 3 HOH 4 304 65 HOH HOH A . D 3 HOH 5 305 46 HOH HOH A . D 3 HOH 6 306 66 HOH HOH A . D 3 HOH 7 307 81 HOH HOH A . D 3 HOH 8 308 75 HOH HOH A . D 3 HOH 9 309 84 HOH HOH A . D 3 HOH 10 310 41 HOH HOH A . D 3 HOH 11 311 37 HOH HOH A . D 3 HOH 12 312 26 HOH HOH A . D 3 HOH 13 313 13 HOH HOH A . D 3 HOH 14 314 22 HOH HOH A . D 3 HOH 15 315 50 HOH HOH A . D 3 HOH 16 316 92 HOH HOH A . D 3 HOH 17 317 42 HOH HOH A . D 3 HOH 18 318 58 HOH HOH A . D 3 HOH 19 319 45 HOH HOH A . D 3 HOH 20 320 5 HOH HOH A . D 3 HOH 21 321 85 HOH HOH A . D 3 HOH 22 322 12 HOH HOH A . D 3 HOH 23 323 6 HOH HOH A . D 3 HOH 24 324 23 HOH HOH A . D 3 HOH 25 325 53 HOH HOH A . D 3 HOH 26 326 11 HOH HOH A . D 3 HOH 27 327 82 HOH HOH A . D 3 HOH 28 328 33 HOH HOH A . D 3 HOH 29 329 40 HOH HOH A . D 3 HOH 30 330 31 HOH HOH A . D 3 HOH 31 331 39 HOH HOH A . D 3 HOH 32 332 64 HOH HOH A . D 3 HOH 33 333 56 HOH HOH A . D 3 HOH 34 334 44 HOH HOH A . D 3 HOH 35 335 79 HOH HOH A . D 3 HOH 36 336 8 HOH HOH A . D 3 HOH 37 337 61 HOH HOH A . D 3 HOH 38 338 20 HOH HOH A . D 3 HOH 39 339 28 HOH HOH A . D 3 HOH 40 340 17 HOH HOH A . D 3 HOH 41 341 4 HOH HOH A . D 3 HOH 42 342 18 HOH HOH A . D 3 HOH 43 343 35 HOH HOH A . D 3 HOH 44 344 19 HOH HOH A . D 3 HOH 45 345 7 HOH HOH A . D 3 HOH 46 346 55 HOH HOH A . D 3 HOH 47 347 24 HOH HOH A . D 3 HOH 48 348 15 HOH HOH A . D 3 HOH 49 349 30 HOH HOH A . D 3 HOH 50 350 51 HOH HOH A . D 3 HOH 51 351 57 HOH HOH A . D 3 HOH 52 352 48 HOH HOH A . D 3 HOH 53 353 10 HOH HOH A . D 3 HOH 54 354 91 HOH HOH A . D 3 HOH 55 355 87 HOH HOH A . D 3 HOH 56 356 14 HOH HOH A . D 3 HOH 57 357 60 HOH HOH A . D 3 HOH 58 358 16 HOH HOH A . D 3 HOH 59 359 9 HOH HOH A . D 3 HOH 60 360 47 HOH HOH A . D 3 HOH 61 361 89 HOH HOH A . D 3 HOH 62 362 25 HOH HOH A . D 3 HOH 63 363 36 HOH HOH A . D 3 HOH 64 364 86 HOH HOH A . D 3 HOH 65 365 62 HOH HOH A . D 3 HOH 66 366 80 HOH HOH A . D 3 HOH 67 367 1 HOH HOH A . D 3 HOH 68 368 34 HOH HOH A . D 3 HOH 69 369 70 HOH HOH A . D 3 HOH 70 370 78 HOH HOH A . D 3 HOH 71 371 54 HOH HOH A . D 3 HOH 72 372 76 HOH HOH A . D 3 HOH 73 373 93 HOH HOH A . D 3 HOH 74 374 38 HOH HOH A . D 3 HOH 75 375 3 HOH HOH A . D 3 HOH 76 376 27 HOH HOH A . D 3 HOH 77 377 68 HOH HOH A . D 3 HOH 78 378 43 HOH HOH A . D 3 HOH 79 379 69 HOH HOH A . D 3 HOH 80 380 77 HOH HOH A . D 3 HOH 81 381 74 HOH HOH A . D 3 HOH 82 382 21 HOH HOH A . D 3 HOH 83 383 63 HOH HOH A . D 3 HOH 84 384 83 HOH HOH A . D 3 HOH 85 385 49 HOH HOH A . D 3 HOH 86 386 67 HOH HOH A . D 3 HOH 87 387 90 HOH HOH A . D 3 HOH 88 388 32 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 49 A MSE 108 ? MET 'modified residue' 2 A MSE 117 A MSE 176 ? MET 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 70 ? 1 MORE -20 ? 1 'SSA (A^2)' 7400 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLU 57 ? A GLU 116 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 NE2 ? A HIS 96 ? A HIS 155 ? 1_555 108.1 ? 2 OE1 ? A GLU 57 ? A GLU 116 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 OE1 ? A GLU 25 ? A GLU 84 ? 1_555 19.8 ? 3 NE2 ? A HIS 96 ? A HIS 155 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 OE1 ? A GLU 25 ? A GLU 84 ? 1_555 89.1 ? 4 OE1 ? A GLU 57 ? A GLU 116 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 O ? D HOH . ? A HOH 354 ? 6_545 100.7 ? 5 NE2 ? A HIS 96 ? A HIS 155 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 O ? D HOH . ? A HOH 354 ? 6_545 104.3 ? 6 OE1 ? A GLU 25 ? A GLU 84 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 O ? D HOH . ? A HOH 354 ? 6_545 100.9 ? 7 OD2 ? A ASP 118 ? A ASP 177 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 O ? D HOH . ? A HOH 371 ? 1_555 106.0 ? 8 OD2 ? A ASP 118 ? A ASP 177 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 ND1 ? A HIS 11 ? A HIS 70 ? 1_555 95.0 ? 9 O ? D HOH . ? A HOH 371 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 ND1 ? A HIS 11 ? A HIS 70 ? 1_555 99.5 ? 10 OD2 ? A ASP 118 ? A ASP 177 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 O ? D HOH . ? A HOH 361 ? 3_444 104.6 ? 11 O ? D HOH . ? A HOH 371 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 O ? D HOH . ? A HOH 361 ? 3_444 133.6 ? 12 ND1 ? A HIS 11 ? A HIS 70 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 O ? D HOH . ? A HOH 361 ? 3_444 43.7 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2020-07-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.12_2829 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? SOLVE ? ? ? . 5 # _pdbx_entry_details.entry_id 6KHU _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 SG A CYS 117 ? ? O A HOH 375 ? ? 2.13 2 1 NH1 A ARG 119 ? ? O A HOH 301 ? ? 2.17 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #