data_6L6O # _entry.id 6L6O # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6L6O pdb_00006l6o 10.2210/pdb6l6o/pdb WWPDB D_1300013547 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6L6O _pdbx_database_status.recvd_initial_deposition_date 2019-10-29 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Arora, A.' 1 0000-0002-0630-2224 'Zohib, M.' 2 0000-0003-2335-4912 'Biswal, B.K.' 3 0000-0002-5927-3244 'Maheshwari, D.' 4 0000-0001-5155-9064 'Pal, R.K.' 5 0000-0002-0423-4694 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acta Crystallogr.,Sect.F' _citation.journal_id_ASTM ACSFEN _citation.journal_id_CSD ? _citation.journal_id_ISSN 2053-230X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 76 _citation.language ? _citation.page_first 544 _citation.page_last 556 _citation.title 'Crystal structure of the GDP-bound GTPase domain of Rab5a from Leishmania donovani.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1107/S2053230X20013722 _citation.pdbx_database_id_PubMed 33135673 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zohib, M.' 1 0000-0003-2335-4912 primary 'Maheshwari, D.' 2 ? primary 'Pal, R.K.' 3 ? primary 'Freitag-Pohl, S.' 4 0000-0002-1423-8103 primary 'Biswal, B.K.' 5 ? primary 'Pohl, E.' 6 ? primary 'Arora, A.' 7 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 6L6O _cell.details ? _cell.formula_units_Z ? _cell.length_a 58.018 _cell.length_a_esd ? _cell.length_b 58.018 _cell.length_b_esd ? _cell.length_c 103.418 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6L6O _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Rab5a 19382.002 1 ? 'P58D, P59G, Q92L, C107S' ? 'residue 60-79 deletion' 2 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 non-polymer nat 'ACETATE ION' 59.044 1 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 6 water nat water 18.015 124 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSMNTHPPQLMEATSAKIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWDTAGLERFRSL APIYYRGASGALVVYDITNSESLKKAQTWIKELRANADPSLIIVLVGNKKDLGSLRQVSFEDGQRLAAEEQLAAFYEASA KDNNNVEQVFLDLAAKL ; _entity_poly.pdbx_seq_one_letter_code_can ;GSMNTHPPQLMEATSAKIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWDTAGLERFRSL APIYYRGASGALVVYDITNSESLKKAQTWIKELRANADPSLIIVLVGNKKDLGSLRQVSFEDGQRLAAEEQLAAFYEASA KDNNNVEQVFLDLAAKL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 MET n 1 4 ASN n 1 5 THR n 1 6 HIS n 1 7 PRO n 1 8 PRO n 1 9 GLN n 1 10 LEU n 1 11 MET n 1 12 GLU n 1 13 ALA n 1 14 THR n 1 15 SER n 1 16 ALA n 1 17 LYS n 1 18 ILE n 1 19 VAL n 1 20 MET n 1 21 LEU n 1 22 GLY n 1 23 GLU n 1 24 SER n 1 25 GLY n 1 26 ALA n 1 27 GLY n 1 28 LYS n 1 29 SER n 1 30 SER n 1 31 ILE n 1 32 ALA n 1 33 LEU n 1 34 ARG n 1 35 PHE n 1 36 THR n 1 37 ARG n 1 38 ASN n 1 39 GLU n 1 40 PHE n 1 41 LEU n 1 42 ALA n 1 43 ASN n 1 44 GLN n 1 45 GLU n 1 46 THR n 1 47 THR n 1 48 ILE n 1 49 GLY n 1 50 ALA n 1 51 ALA n 1 52 PHE n 1 53 LEU n 1 54 SER n 1 55 LYS n 1 56 THR n 1 57 VAL n 1 58 MET n 1 59 ILE n 1 60 ASP n 1 61 GLY n 1 62 ARG n 1 63 ALA n 1 64 LEU n 1 65 LYS n 1 66 TYR n 1 67 GLU n 1 68 ILE n 1 69 TRP n 1 70 ASP n 1 71 THR n 1 72 ALA n 1 73 GLY n 1 74 LEU n 1 75 GLU n 1 76 ARG n 1 77 PHE n 1 78 ARG n 1 79 SER n 1 80 LEU n 1 81 ALA n 1 82 PRO n 1 83 ILE n 1 84 TYR n 1 85 TYR n 1 86 ARG n 1 87 GLY n 1 88 ALA n 1 89 SER n 1 90 GLY n 1 91 ALA n 1 92 LEU n 1 93 VAL n 1 94 VAL n 1 95 TYR n 1 96 ASP n 1 97 ILE n 1 98 THR n 1 99 ASN n 1 100 SER n 1 101 GLU n 1 102 SER n 1 103 LEU n 1 104 LYS n 1 105 LYS n 1 106 ALA n 1 107 GLN n 1 108 THR n 1 109 TRP n 1 110 ILE n 1 111 LYS n 1 112 GLU n 1 113 LEU n 1 114 ARG n 1 115 ALA n 1 116 ASN n 1 117 ALA n 1 118 ASP n 1 119 PRO n 1 120 SER n 1 121 LEU n 1 122 ILE n 1 123 ILE n 1 124 VAL n 1 125 LEU n 1 126 VAL n 1 127 GLY n 1 128 ASN n 1 129 LYS n 1 130 LYS n 1 131 ASP n 1 132 LEU n 1 133 GLY n 1 134 SER n 1 135 LEU n 1 136 ARG n 1 137 GLN n 1 138 VAL n 1 139 SER n 1 140 PHE n 1 141 GLU n 1 142 ASP n 1 143 GLY n 1 144 GLN n 1 145 ARG n 1 146 LEU n 1 147 ALA n 1 148 ALA n 1 149 GLU n 1 150 GLU n 1 151 GLN n 1 152 LEU n 1 153 ALA n 1 154 ALA n 1 155 PHE n 1 156 TYR n 1 157 GLU n 1 158 ALA n 1 159 SER n 1 160 ALA n 1 161 LYS n 1 162 ASP n 1 163 ASN n 1 164 ASN n 1 165 ASN n 1 166 VAL n 1 167 GLU n 1 168 GLN n 1 169 VAL n 1 170 PHE n 1 171 LEU n 1 172 ASP n 1 173 LEU n 1 174 ALA n 1 175 ALA n 1 176 LYS n 1 177 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 177 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Rab5a _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Leishmania donovani' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5661 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX4T1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A109NYM0_LEIDO _struct_ref.pdbx_db_accession A0A109NYM0 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MNTHPPQLMEATSAKIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIPPPRGAAAAPGGATSAHALQQMR ALKYEIWDTAGQERFRSLAPIYYRGACGALVVYDITNSESLKKAQTWIKELRANADPSLIIVLVGNKKDLGSLRQVSFED GQRLAAEEQLAAFYEASAKDNNNVEQVFLDLAAKL ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6L6O _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 177 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A109NYM0 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 195 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 175 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6L6O GLY A 1 ? UNP A0A109NYM0 ? ? 'expression tag' -1 1 1 6L6O SER A 2 ? UNP A0A109NYM0 ? ? 'expression tag' 0 2 1 6L6O ASP A 60 ? UNP A0A109NYM0 PRO 58 'engineered mutation' 58 3 1 6L6O GLY A 61 ? UNP A0A109NYM0 PRO 59 'engineered mutation' 59 4 1 6L6O ? A ? ? UNP A0A109NYM0 PRO 60 deletion ? 5 1 6L6O ? A ? ? UNP A0A109NYM0 ARG 61 deletion ? 6 1 6L6O ? A ? ? UNP A0A109NYM0 GLY 62 deletion ? 7 1 6L6O ? A ? ? UNP A0A109NYM0 ALA 63 deletion ? 8 1 6L6O ? A ? ? UNP A0A109NYM0 ALA 64 deletion ? 9 1 6L6O ? A ? ? UNP A0A109NYM0 ALA 65 deletion ? 10 1 6L6O ? A ? ? UNP A0A109NYM0 ALA 66 deletion ? 11 1 6L6O ? A ? ? UNP A0A109NYM0 PRO 67 deletion ? 12 1 6L6O ? A ? ? UNP A0A109NYM0 GLY 68 deletion ? 13 1 6L6O ? A ? ? UNP A0A109NYM0 GLY 69 deletion ? 14 1 6L6O ? A ? ? UNP A0A109NYM0 ALA 70 deletion ? 15 1 6L6O ? A ? ? UNP A0A109NYM0 THR 71 deletion ? 16 1 6L6O ? A ? ? UNP A0A109NYM0 SER 72 deletion ? 17 1 6L6O ? A ? ? UNP A0A109NYM0 ALA 73 deletion ? 18 1 6L6O ? A ? ? UNP A0A109NYM0 HIS 74 deletion ? 19 1 6L6O ? A ? ? UNP A0A109NYM0 ALA 75 deletion ? 20 1 6L6O ? A ? ? UNP A0A109NYM0 LEU 76 deletion ? 21 1 6L6O ? A ? ? UNP A0A109NYM0 GLN 77 deletion ? 22 1 6L6O ? A ? ? UNP A0A109NYM0 GLN 78 deletion ? 23 1 6L6O ? A ? ? UNP A0A109NYM0 MET 79 deletion ? 24 1 6L6O LEU A 74 ? UNP A0A109NYM0 GLN 92 'engineered mutation' 72 25 1 6L6O SER A 89 ? UNP A0A109NYM0 CYS 107 'engineered mutation' 87 26 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6L6O _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.78 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 55.80 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;200mM Ammonium Acetate, 100mM Tris HCl, pH 8.5 15% PEG 3350 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RIGAKU RAXIS IV++' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-05-10 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54178 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU FR-E+ SUPERBRIGHT' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.54178 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6L6O _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.800 _reflns.d_resolution_low 35.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 19056 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.900 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 15.100 _reflns.pdbx_Rmerge_I_obs 0.057 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.000 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.315 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.059 _reflns.pdbx_Rpim_I_all 0.015 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 287720 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 1.800 1.860 ? ? ? ? ? ? 1701 89.700 ? ? ? ? 0.748 ? ? ? ? ? ? ? ? 8.800 ? 1.034 ? ? 0.784 0.223 ? 1 1 0.909 ? ? 1.860 1.940 ? ? ? ? ? ? 1880 99.800 ? ? ? ? 0.570 ? ? ? ? ? ? ? ? 13.100 ? 1.100 ? ? 0.591 0.153 ? 2 1 0.988 ? ? 1.940 2.030 ? ? ? ? ? ? 1881 100.000 ? ? ? ? 0.431 ? ? ? ? ? ? ? ? 14.900 ? 1.178 ? ? 0.446 0.113 ? 3 1 0.981 ? ? 2.030 2.130 ? ? ? ? ? ? 1894 100.000 ? ? ? ? 0.315 ? ? ? ? ? ? ? ? 14.900 ? 1.224 ? ? 0.326 0.083 ? 4 1 0.989 ? ? 2.130 2.270 ? ? ? ? ? ? 1889 100.000 ? ? ? ? 0.224 ? ? ? ? ? ? ? ? 15.000 ? 1.271 ? ? 0.231 0.059 ? 5 1 0.993 ? ? 2.270 2.440 ? ? ? ? ? ? 1922 100.000 ? ? ? ? 0.142 ? ? ? ? ? ? ? ? 15.400 ? 1.290 ? ? 0.147 0.037 ? 6 1 0.998 ? ? 2.440 2.690 ? ? ? ? ? ? 1923 100.000 ? ? ? ? 0.104 ? ? ? ? ? ? ? ? 16.200 ? 1.354 ? ? 0.107 0.026 ? 7 1 0.998 ? ? 2.690 3.080 ? ? ? ? ? ? 1931 100.000 ? ? ? ? 0.067 ? ? ? ? ? ? ? ? 17.100 ? 1.390 ? ? 0.069 0.017 ? 8 1 0.999 ? ? 3.080 3.880 ? ? ? ? ? ? 1967 100.000 ? ? ? ? 0.038 ? ? ? ? ? ? ? ? 17.700 ? 1.564 ? ? 0.039 0.009 ? 9 1 1.000 ? ? 3.880 35.000 ? ? ? ? ? ? 2068 99.500 ? ? ? ? 0.027 ? ? ? ? ? ? ? ? 17.000 ? 1.460 ? ? 0.027 0.007 ? 10 1 1.000 ? ? # _refine.aniso_B[1][1] 0.7100 _refine.aniso_B[1][2] 0.3500 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 0.7100 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -2.2900 _refine.B_iso_max 87.710 _refine.B_iso_mean 35.1030 _refine.B_iso_min 21.940 _refine.correlation_coeff_Fo_to_Fc 0.9730 _refine.correlation_coeff_Fo_to_Fc_free 0.9600 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6L6O _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.8000 _refine.ls_d_res_low 24.4200 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 18075 _refine.ls_number_reflns_R_free 938 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.7500 _refine.ls_percent_reflns_R_free 4.9000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1669 _refine.ls_R_factor_R_free 0.2031 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1650 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 2HEI _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.1040 _refine.pdbx_overall_ESU_R_Free 0.1060 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 5.1510 _refine.overall_SU_ML 0.0790 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.8000 _refine_hist.d_res_low 24.4200 _refine_hist.number_atoms_solvent 124 _refine_hist.number_atoms_total 1429 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 165 _refine_hist.pdbx_B_iso_mean_ligand 37.66 _refine_hist.pdbx_B_iso_mean_solvent 43.39 _refine_hist.pdbx_number_atoms_protein 1266 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 39 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.017 0.013 1344 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.017 1271 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 2.146 1.665 1827 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.537 1.587 2940 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 7.658 5.000 173 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 33.024 22.308 65 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 13.271 15.000 233 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 21.764 15.000 9 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.094 0.200 181 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.012 0.020 1506 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 285 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.8010 _refine_ls_shell.d_res_low 1.8480 _refine_ls_shell.number_reflns_all 1189 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 55 _refine_ls_shell.number_reflns_R_work 1134 _refine_ls_shell.percent_reflns_obs 85.6600 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3690 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.3740 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6L6O _struct.title 'Crystal structure of stabilized Rab5a GTPase domain from Leishmania donovani' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6L6O _struct_keywords.text 'Intracellular trafficking, GTPase, ENDOCYTOSIS' _struct_keywords.pdbx_keywords ENDOCYTOSIS # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 27 ? ASN A 38 ? GLY A 25 ASN A 36 1 ? 12 HELX_P HELX_P2 AA2 GLY A 73 ? ARG A 78 ? GLY A 71 ARG A 76 5 ? 6 HELX_P HELX_P3 AA3 ALA A 81 ? ARG A 86 ? ALA A 79 ARG A 84 1 ? 6 HELX_P HELX_P4 AA4 ASN A 99 ? ALA A 117 ? ASN A 97 ALA A 115 1 ? 19 HELX_P HELX_P5 AA5 LEU A 132 ? ARG A 136 ? LEU A 130 ARG A 134 5 ? 5 HELX_P HELX_P6 AA6 SER A 139 ? GLU A 150 ? SER A 137 GLU A 148 1 ? 12 HELX_P HELX_P7 AA7 ASN A 165 ? LEU A 177 ? ASN A 163 LEU A 175 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A SER 29 OG ? ? ? 1_555 E MG . MG ? ? A SER 27 A MG 204 1_555 ? ? ? ? ? ? ? 2.045 ? ? metalc2 metalc ? ? B GDP . O2B ? ? ? 1_555 E MG . MG ? ? A GDP 201 A MG 204 1_555 ? ? ? ? ? ? ? 2.049 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE A 52 ? MET A 58 ? PHE A 50 MET A 56 AA1 2 ALA A 63 ? TRP A 69 ? ALA A 61 TRP A 67 AA1 3 THR A 14 ? GLY A 22 ? THR A 12 GLY A 20 AA1 4 GLY A 90 ? ASP A 96 ? GLY A 88 ASP A 94 AA1 5 ILE A 122 ? ASN A 128 ? ILE A 120 ASN A 126 AA1 6 ALA A 154 ? GLU A 157 ? ALA A 152 GLU A 155 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LYS A 55 ? N LYS A 53 O TYR A 66 ? O TYR A 64 AA1 2 3 O GLU A 67 ? O GLU A 65 N ALA A 16 ? N ALA A 14 AA1 3 4 N LEU A 21 ? N LEU A 19 O LEU A 92 ? O LEU A 90 AA1 4 5 N TYR A 95 ? N TYR A 93 O ASN A 128 ? O ASN A 126 AA1 5 6 N GLY A 127 ? N GLY A 125 O TYR A 156 ? O TYR A 154 # _atom_sites.entry_id 6L6O _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.017236 _atom_sites.fract_transf_matrix[1][2] 0.009951 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019902 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009669 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C MG N O P S X # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 SER 2 0 ? ? ? A . n A 1 3 MET 3 1 ? ? ? A . n A 1 4 ASN 4 2 ? ? ? A . n A 1 5 THR 5 3 ? ? ? A . n A 1 6 HIS 6 4 ? ? ? A . n A 1 7 PRO 7 5 ? ? ? A . n A 1 8 PRO 8 6 ? ? ? A . n A 1 9 GLN 9 7 ? ? ? A . n A 1 10 LEU 10 8 ? ? ? A . n A 1 11 MET 11 9 ? ? ? A . n A 1 12 GLU 12 10 ? ? ? A . n A 1 13 ALA 13 11 1 ALA ALA A . n A 1 14 THR 14 12 2 THR THR A . n A 1 15 SER 15 13 3 SER SER A . n A 1 16 ALA 16 14 4 ALA ALA A . n A 1 17 LYS 17 15 5 LYS LYS A . n A 1 18 ILE 18 16 6 ILE ILE A . n A 1 19 VAL 19 17 7 VAL VAL A . n A 1 20 MET 20 18 8 MET MET A . n A 1 21 LEU 21 19 9 LEU LEU A . n A 1 22 GLY 22 20 10 GLY GLY A . n A 1 23 GLU 23 21 11 GLU GLU A . n A 1 24 SER 24 22 12 SER SER A . n A 1 25 GLY 25 23 13 GLY GLY A . n A 1 26 ALA 26 24 14 ALA ALA A . n A 1 27 GLY 27 25 15 GLY GLY A . n A 1 28 LYS 28 26 16 LYS LYS A . n A 1 29 SER 29 27 17 SER SER A . n A 1 30 SER 30 28 18 SER SER A . n A 1 31 ILE 31 29 19 ILE ILE A . n A 1 32 ALA 32 30 20 ALA ALA A . n A 1 33 LEU 33 31 21 LEU LEU A . n A 1 34 ARG 34 32 22 ARG ARG A . n A 1 35 PHE 35 33 23 PHE PHE A . n A 1 36 THR 36 34 24 THR THR A . n A 1 37 ARG 37 35 25 ARG ARG A . n A 1 38 ASN 38 36 26 ASN ASN A . n A 1 39 GLU 39 37 27 GLU GLU A . n A 1 40 PHE 40 38 28 PHE PHE A . n A 1 41 LEU 41 39 29 LEU LEU A . n A 1 42 ALA 42 40 30 ALA ALA A . n A 1 43 ASN 43 41 31 ASN ASN A . n A 1 44 GLN 44 42 32 GLN GLN A . n A 1 45 GLU 45 43 33 GLU GLU A . n A 1 46 THR 46 44 34 THR THR A . n A 1 47 THR 47 45 35 THR THR A . n A 1 48 ILE 48 46 36 ILE ILE A . n A 1 49 GLY 49 47 37 GLY GLY A . n A 1 50 ALA 50 48 38 ALA ALA A . n A 1 51 ALA 51 49 39 ALA ALA A . n A 1 52 PHE 52 50 40 PHE PHE A . n A 1 53 LEU 53 51 41 LEU LEU A . n A 1 54 SER 54 52 42 SER SER A . n A 1 55 LYS 55 53 43 LYS LYS A . n A 1 56 THR 56 54 44 THR THR A . n A 1 57 VAL 57 55 45 VAL VAL A . n A 1 58 MET 58 56 46 MET MET A . n A 1 59 ILE 59 57 47 ILE ILE A . n A 1 60 ASP 60 58 48 ASP ASP A . n A 1 61 GLY 61 59 49 GLY GLY A . n A 1 62 ARG 62 60 50 ARG ARG A . n A 1 63 ALA 63 61 51 ALA ALA A . n A 1 64 LEU 64 62 52 LEU LEU A . n A 1 65 LYS 65 63 53 LYS LYS A . n A 1 66 TYR 66 64 54 TYR TYR A . n A 1 67 GLU 67 65 55 GLU GLU A . n A 1 68 ILE 68 66 56 ILE ILE A . n A 1 69 TRP 69 67 57 TRP TRP A . n A 1 70 ASP 70 68 58 ASP ASP A . n A 1 71 THR 71 69 59 THR THR A . n A 1 72 ALA 72 70 60 ALA ALA A . n A 1 73 GLY 73 71 61 GLY GLY A . n A 1 74 LEU 74 72 62 LEU LEU A . n A 1 75 GLU 75 73 63 GLU GLU A . n A 1 76 ARG 76 74 64 ARG ARG A . n A 1 77 PHE 77 75 65 PHE PHE A . n A 1 78 ARG 78 76 66 ARG ARG A . n A 1 79 SER 79 77 67 SER SER A . n A 1 80 LEU 80 78 68 LEU LEU A . n A 1 81 ALA 81 79 69 ALA ALA A . n A 1 82 PRO 82 80 70 PRO PRO A . n A 1 83 ILE 83 81 71 ILE ILE A . n A 1 84 TYR 84 82 72 TYR TYR A . n A 1 85 TYR 85 83 73 TYR TYR A . n A 1 86 ARG 86 84 74 ARG ARG A . n A 1 87 GLY 87 85 75 GLY GLY A . n A 1 88 ALA 88 86 76 ALA ALA A . n A 1 89 SER 89 87 77 SER SER A . n A 1 90 GLY 90 88 78 GLY GLY A . n A 1 91 ALA 91 89 79 ALA ALA A . n A 1 92 LEU 92 90 80 LEU LEU A . n A 1 93 VAL 93 91 81 VAL VAL A . n A 1 94 VAL 94 92 82 VAL VAL A . n A 1 95 TYR 95 93 83 TYR TYR A . n A 1 96 ASP 96 94 84 ASP ASP A . n A 1 97 ILE 97 95 85 ILE ILE A . n A 1 98 THR 98 96 86 THR THR A . n A 1 99 ASN 99 97 87 ASN ASN A . n A 1 100 SER 100 98 88 SER SER A . n A 1 101 GLU 101 99 89 GLU GLU A . n A 1 102 SER 102 100 90 SER SER A . n A 1 103 LEU 103 101 91 LEU LEU A . n A 1 104 LYS 104 102 92 LYS LYS A . n A 1 105 LYS 105 103 93 LYS LYS A . n A 1 106 ALA 106 104 94 ALA ALA A . n A 1 107 GLN 107 105 95 GLN GLN A . n A 1 108 THR 108 106 96 THR THR A . n A 1 109 TRP 109 107 97 TRP TRP A . n A 1 110 ILE 110 108 98 ILE ILE A . n A 1 111 LYS 111 109 99 LYS LYS A . n A 1 112 GLU 112 110 100 GLU GLU A . n A 1 113 LEU 113 111 101 LEU LEU A . n A 1 114 ARG 114 112 102 ARG ARG A . n A 1 115 ALA 115 113 103 ALA ALA A . n A 1 116 ASN 116 114 104 ASN ASN A . n A 1 117 ALA 117 115 105 ALA ALA A . n A 1 118 ASP 118 116 106 ASP ASP A . n A 1 119 PRO 119 117 107 PRO PRO A . n A 1 120 SER 120 118 108 SER SER A . n A 1 121 LEU 121 119 109 LEU LEU A . n A 1 122 ILE 122 120 110 ILE ILE A . n A 1 123 ILE 123 121 111 ILE ILE A . n A 1 124 VAL 124 122 112 VAL VAL A . n A 1 125 LEU 125 123 113 LEU LEU A . n A 1 126 VAL 126 124 114 VAL VAL A . n A 1 127 GLY 127 125 115 GLY GLY A . n A 1 128 ASN 128 126 116 ASN ASN A . n A 1 129 LYS 129 127 117 LYS LYS A . n A 1 130 LYS 130 128 118 LYS LYS A . n A 1 131 ASP 131 129 119 ASP ASP A . n A 1 132 LEU 132 130 120 LEU LEU A . n A 1 133 GLY 133 131 121 GLY GLY A . n A 1 134 SER 134 132 122 SER SER A . n A 1 135 LEU 135 133 123 LEU LEU A . n A 1 136 ARG 136 134 124 ARG ARG A . n A 1 137 GLN 137 135 125 GLN GLN A . n A 1 138 VAL 138 136 126 VAL VAL A . n A 1 139 SER 139 137 127 SER SER A . n A 1 140 PHE 140 138 128 PHE PHE A . n A 1 141 GLU 141 139 129 GLU GLU A . n A 1 142 ASP 142 140 130 ASP ASP A . n A 1 143 GLY 143 141 131 GLY GLY A . n A 1 144 GLN 144 142 132 GLN GLN A . n A 1 145 ARG 145 143 133 ARG ARG A . n A 1 146 LEU 146 144 134 LEU LEU A . n A 1 147 ALA 147 145 135 ALA ALA A . n A 1 148 ALA 148 146 136 ALA ALA A . n A 1 149 GLU 149 147 137 GLU GLU A . n A 1 150 GLU 150 148 138 GLU GLU A . n A 1 151 GLN 151 149 139 GLN GLN A . n A 1 152 LEU 152 150 140 LEU LEU A . n A 1 153 ALA 153 151 141 ALA ALA A . n A 1 154 ALA 154 152 142 ALA ALA A . n A 1 155 PHE 155 153 143 PHE PHE A . n A 1 156 TYR 156 154 144 TYR TYR A . n A 1 157 GLU 157 155 145 GLU GLU A . n A 1 158 ALA 158 156 146 ALA ALA A . n A 1 159 SER 159 157 147 SER SER A . n A 1 160 ALA 160 158 148 ALA ALA A . n A 1 161 LYS 161 159 149 LYS LYS A . n A 1 162 ASP 162 160 150 ASP ASP A . n A 1 163 ASN 163 161 151 ASN ASN A . n A 1 164 ASN 164 162 152 ASN ASN A . n A 1 165 ASN 165 163 153 ASN ASN A . n A 1 166 VAL 166 164 154 VAL VAL A . n A 1 167 GLU 167 165 155 GLU GLU A . n A 1 168 GLN 168 166 156 GLN GLN A . n A 1 169 VAL 169 167 157 VAL VAL A . n A 1 170 PHE 170 168 158 PHE PHE A . n A 1 171 LEU 171 169 159 LEU LEU A . n A 1 172 ASP 172 170 160 ASP ASP A . n A 1 173 LEU 173 171 161 LEU LEU A . n A 1 174 ALA 174 172 162 ALA ALA A . n A 1 175 ALA 175 173 163 ALA ALA A . n A 1 176 LYS 176 174 164 LYS LYS A . n A 1 177 LEU 177 175 165 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP 1 201 166 GDP GDP A . C 3 GOL 1 202 167 GOL GOL A . D 4 ACT 1 203 168 ACT ACT A . E 5 MG 1 204 1 MG MG A . F 6 HOH 1 301 108 HOH HOH A . F 6 HOH 2 302 84 HOH HOH A . F 6 HOH 3 303 125 HOH HOH A . F 6 HOH 4 304 67 HOH HOH A . F 6 HOH 5 305 69 HOH HOH A . F 6 HOH 6 306 41 HOH HOH A . F 6 HOH 7 307 101 HOH HOH A . F 6 HOH 8 308 26 HOH HOH A . F 6 HOH 9 309 50 HOH HOH A . F 6 HOH 10 310 60 HOH HOH A . F 6 HOH 11 311 20 HOH HOH A . F 6 HOH 12 312 121 HOH HOH A . F 6 HOH 13 313 4 HOH HOH A . F 6 HOH 14 314 36 HOH HOH A . F 6 HOH 15 315 34 HOH HOH A . F 6 HOH 16 316 22 HOH HOH A . F 6 HOH 17 317 71 HOH HOH A . F 6 HOH 18 318 17 HOH HOH A . F 6 HOH 19 319 56 HOH HOH A . F 6 HOH 20 320 3 HOH HOH A . F 6 HOH 21 321 105 HOH HOH A . F 6 HOH 22 322 119 HOH HOH A . F 6 HOH 23 323 31 HOH HOH A . F 6 HOH 24 324 66 HOH HOH A . F 6 HOH 25 325 115 HOH HOH A . F 6 HOH 26 326 10 HOH HOH A . F 6 HOH 27 327 25 HOH HOH A . F 6 HOH 28 328 47 HOH HOH A . F 6 HOH 29 329 86 HOH HOH A . F 6 HOH 30 330 46 HOH HOH A . F 6 HOH 31 331 23 HOH HOH A . F 6 HOH 32 332 58 HOH HOH A . F 6 HOH 33 333 118 HOH HOH A . F 6 HOH 34 334 45 HOH HOH A . F 6 HOH 35 335 83 HOH HOH A . F 6 HOH 36 336 53 HOH HOH A . F 6 HOH 37 337 64 HOH HOH A . F 6 HOH 38 338 123 HOH HOH A . F 6 HOH 39 339 100 HOH HOH A . F 6 HOH 40 340 21 HOH HOH A . F 6 HOH 41 341 96 HOH HOH A . F 6 HOH 42 342 62 HOH HOH A . F 6 HOH 43 343 15 HOH HOH A . F 6 HOH 44 344 54 HOH HOH A . F 6 HOH 45 345 65 HOH HOH A . F 6 HOH 46 346 38 HOH HOH A . F 6 HOH 47 347 12 HOH HOH A . F 6 HOH 48 348 30 HOH HOH A . F 6 HOH 49 349 9 HOH HOH A . F 6 HOH 50 350 1 HOH HOH A . F 6 HOH 51 351 120 HOH HOH A . F 6 HOH 52 352 18 HOH HOH A . F 6 HOH 53 353 2 HOH HOH A . F 6 HOH 54 354 6 HOH HOH A . F 6 HOH 55 355 52 HOH HOH A . F 6 HOH 56 356 113 HOH HOH A . F 6 HOH 57 357 19 HOH HOH A . F 6 HOH 58 358 8 HOH HOH A . F 6 HOH 59 359 5 HOH HOH A . F 6 HOH 60 360 74 HOH HOH A . F 6 HOH 61 361 39 HOH HOH A . F 6 HOH 62 362 13 HOH HOH A . F 6 HOH 63 363 97 HOH HOH A . F 6 HOH 64 364 88 HOH HOH A . F 6 HOH 65 365 24 HOH HOH A . F 6 HOH 66 366 73 HOH HOH A . F 6 HOH 67 367 68 HOH HOH A . F 6 HOH 68 368 16 HOH HOH A . F 6 HOH 69 369 55 HOH HOH A . F 6 HOH 70 370 102 HOH HOH A . F 6 HOH 71 371 43 HOH HOH A . F 6 HOH 72 372 7 HOH HOH A . F 6 HOH 73 373 32 HOH HOH A . F 6 HOH 74 374 44 HOH HOH A . F 6 HOH 75 375 40 HOH HOH A . F 6 HOH 76 376 14 HOH HOH A . F 6 HOH 77 377 27 HOH HOH A . F 6 HOH 78 378 81 HOH HOH A . F 6 HOH 79 379 61 HOH HOH A . F 6 HOH 80 380 77 HOH HOH A . F 6 HOH 81 381 48 HOH HOH A . F 6 HOH 82 382 91 HOH HOH A . F 6 HOH 83 383 103 HOH HOH A . F 6 HOH 84 384 11 HOH HOH A . F 6 HOH 85 385 59 HOH HOH A . F 6 HOH 86 386 112 HOH HOH A . F 6 HOH 87 387 35 HOH HOH A . F 6 HOH 88 388 70 HOH HOH A . F 6 HOH 89 389 28 HOH HOH A . F 6 HOH 90 390 72 HOH HOH A . F 6 HOH 91 391 85 HOH HOH A . F 6 HOH 92 392 76 HOH HOH A . F 6 HOH 93 393 109 HOH HOH A . F 6 HOH 94 394 79 HOH HOH A . F 6 HOH 95 395 89 HOH HOH A . F 6 HOH 96 396 93 HOH HOH A . F 6 HOH 97 397 37 HOH HOH A . F 6 HOH 98 398 63 HOH HOH A . F 6 HOH 99 399 99 HOH HOH A . F 6 HOH 100 400 92 HOH HOH A . F 6 HOH 101 401 107 HOH HOH A . F 6 HOH 102 402 78 HOH HOH A . F 6 HOH 103 403 75 HOH HOH A . F 6 HOH 104 404 42 HOH HOH A . F 6 HOH 105 405 95 HOH HOH A . F 6 HOH 106 406 57 HOH HOH A . F 6 HOH 107 407 87 HOH HOH A . F 6 HOH 108 408 90 HOH HOH A . F 6 HOH 109 409 82 HOH HOH A . F 6 HOH 110 410 126 HOH HOH A . F 6 HOH 111 411 114 HOH HOH A . F 6 HOH 112 412 98 HOH HOH A . F 6 HOH 113 413 51 HOH HOH A . F 6 HOH 114 414 116 HOH HOH A . F 6 HOH 115 415 104 HOH HOH A . F 6 HOH 116 416 124 HOH HOH A . F 6 HOH 117 417 29 HOH HOH A . F 6 HOH 118 418 106 HOH HOH A . F 6 HOH 119 419 33 HOH HOH A . F 6 HOH 120 420 110 HOH HOH A . F 6 HOH 121 421 49 HOH HOH A . F 6 HOH 122 422 94 HOH HOH A . F 6 HOH 123 423 80 HOH HOH A . F 6 HOH 124 424 111 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 900 ? 1 MORE -19 ? 1 'SSA (A^2)' 7880 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id OG _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id A _pdbx_struct_conn_angle.ptnr1_label_comp_id SER _pdbx_struct_conn_angle.ptnr1_label_seq_id 29 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id SER _pdbx_struct_conn_angle.ptnr1_auth_seq_id 27 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id MG _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id E _pdbx_struct_conn_angle.ptnr2_label_comp_id MG _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id MG _pdbx_struct_conn_angle.ptnr2_auth_seq_id 204 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id O2B _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id B _pdbx_struct_conn_angle.ptnr3_label_comp_id GDP _pdbx_struct_conn_angle.ptnr3_label_seq_id . _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id GDP _pdbx_struct_conn_angle.ptnr3_auth_seq_id 201 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 89.6 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-11-11 2 'Structure model' 1 1 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -23.061 _pdbx_refine_tls.origin_y 20.903 _pdbx_refine_tls.origin_z -13.316 _pdbx_refine_tls.T[1][1] 0.0227 _pdbx_refine_tls.T[2][2] 0.1200 _pdbx_refine_tls.T[3][3] 0.0320 _pdbx_refine_tls.T[1][2] 0.0131 _pdbx_refine_tls.T[1][3] 0.0120 _pdbx_refine_tls.T[2][3] -0.0061 _pdbx_refine_tls.L[1][1] 0.4433 _pdbx_refine_tls.L[2][2] 0.4654 _pdbx_refine_tls.L[3][3] 1.0121 _pdbx_refine_tls.L[1][2] 0.0042 _pdbx_refine_tls.L[1][3] -0.5223 _pdbx_refine_tls.L[2][3] 0.2046 _pdbx_refine_tls.S[1][1] -0.0259 _pdbx_refine_tls.S[2][2] 0.0093 _pdbx_refine_tls.S[3][3] 0.0166 _pdbx_refine_tls.S[1][2] -0.1163 _pdbx_refine_tls.S[1][3] 0.0649 _pdbx_refine_tls.S[2][3] 0.0454 _pdbx_refine_tls.S[2][1] -0.0290 _pdbx_refine_tls.S[3][1] 0.0942 _pdbx_refine_tls.S[3][2] 0.1440 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 11 A 175 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 2 1 A 201 A 203 ? ? ? ? ? ? # _phasing.method MR # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0257 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 5 # _pdbx_entry_details.entry_id 6L6O _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CD _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 GLU _pdbx_validate_rmsd_bond.auth_seq_id_1 110 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OE2 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 GLU _pdbx_validate_rmsd_bond.auth_seq_id_2 110 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.336 _pdbx_validate_rmsd_bond.bond_target_value 1.252 _pdbx_validate_rmsd_bond.bond_deviation 0.084 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.011 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 41 ? ? 38.03 49.12 2 1 ILE A 57 ? ? -100.66 -165.32 3 1 ALA A 173 ? ? -26.09 -58.09 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 424 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 5.86 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN 41 ? OD1 ? A ASN 43 OD1 2 1 Y 1 A ASN 41 ? ND2 ? A ASN 43 ND2 3 1 Y 1 A ILE 57 ? CD1 ? A ILE 59 CD1 4 1 Y 1 A LYS 174 ? CD ? A LYS 176 CD 5 1 Y 1 A LYS 174 ? CE ? A LYS 176 CE 6 1 Y 1 A LYS 174 ? NZ ? A LYS 176 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? A GLY 1 2 1 Y 1 A SER 0 ? A SER 2 3 1 Y 1 A MET 1 ? A MET 3 4 1 Y 1 A ASN 2 ? A ASN 4 5 1 Y 1 A THR 3 ? A THR 5 6 1 Y 1 A HIS 4 ? A HIS 6 7 1 Y 1 A PRO 5 ? A PRO 7 8 1 Y 1 A PRO 6 ? A PRO 8 9 1 Y 1 A GLN 7 ? A GLN 9 10 1 Y 1 A LEU 8 ? A LEU 10 11 1 Y 1 A MET 9 ? A MET 11 12 1 Y 1 A GLU 10 ? A GLU 12 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACT C C N N 1 ACT O O N N 2 ACT OXT O N N 3 ACT CH3 C N N 4 ACT H1 H N N 5 ACT H2 H N N 6 ACT H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 CYS N N N N 81 CYS CA C N R 82 CYS C C N N 83 CYS O O N N 84 CYS CB C N N 85 CYS SG S N N 86 CYS OXT O N N 87 CYS H H N N 88 CYS H2 H N N 89 CYS HA H N N 90 CYS HB2 H N N 91 CYS HB3 H N N 92 CYS HG H N N 93 CYS HXT H N N 94 GDP PB P N N 95 GDP O1B O N N 96 GDP O2B O N N 97 GDP O3B O N N 98 GDP O3A O N N 99 GDP PA P N N 100 GDP O1A O N N 101 GDP O2A O N N 102 GDP "O5'" O N N 103 GDP "C5'" C N N 104 GDP "C4'" C N R 105 GDP "O4'" O N N 106 GDP "C3'" C N S 107 GDP "O3'" O N N 108 GDP "C2'" C N R 109 GDP "O2'" O N N 110 GDP "C1'" C N R 111 GDP N9 N Y N 112 GDP C8 C Y N 113 GDP N7 N Y N 114 GDP C5 C Y N 115 GDP C6 C N N 116 GDP O6 O N N 117 GDP N1 N N N 118 GDP C2 C N N 119 GDP N2 N N N 120 GDP N3 N N N 121 GDP C4 C Y N 122 GDP HOB2 H N N 123 GDP HOB3 H N N 124 GDP HOA2 H N N 125 GDP "H5'" H N N 126 GDP "H5''" H N N 127 GDP "H4'" H N N 128 GDP "H3'" H N N 129 GDP "HO3'" H N N 130 GDP "H2'" H N N 131 GDP "HO2'" H N N 132 GDP "H1'" H N N 133 GDP H8 H N N 134 GDP HN1 H N N 135 GDP HN21 H N N 136 GDP HN22 H N N 137 GLN N N N N 138 GLN CA C N S 139 GLN C C N N 140 GLN O O N N 141 GLN CB C N N 142 GLN CG C N N 143 GLN CD C N N 144 GLN OE1 O N N 145 GLN NE2 N N N 146 GLN OXT O N N 147 GLN H H N N 148 GLN H2 H N N 149 GLN HA H N N 150 GLN HB2 H N N 151 GLN HB3 H N N 152 GLN HG2 H N N 153 GLN HG3 H N N 154 GLN HE21 H N N 155 GLN HE22 H N N 156 GLN HXT H N N 157 GLU N N N N 158 GLU CA C N S 159 GLU C C N N 160 GLU O O N N 161 GLU CB C N N 162 GLU CG C N N 163 GLU CD C N N 164 GLU OE1 O N N 165 GLU OE2 O N N 166 GLU OXT O N N 167 GLU H H N N 168 GLU H2 H N N 169 GLU HA H N N 170 GLU HB2 H N N 171 GLU HB3 H N N 172 GLU HG2 H N N 173 GLU HG3 H N N 174 GLU HE2 H N N 175 GLU HXT H N N 176 GLY N N N N 177 GLY CA C N N 178 GLY C C N N 179 GLY O O N N 180 GLY OXT O N N 181 GLY H H N N 182 GLY H2 H N N 183 GLY HA2 H N N 184 GLY HA3 H N N 185 GLY HXT H N N 186 GOL C1 C N N 187 GOL O1 O N N 188 GOL C2 C N N 189 GOL O2 O N N 190 GOL C3 C N N 191 GOL O3 O N N 192 GOL H11 H N N 193 GOL H12 H N N 194 GOL HO1 H N N 195 GOL H2 H N N 196 GOL HO2 H N N 197 GOL H31 H N N 198 GOL H32 H N N 199 GOL HO3 H N N 200 HIS N N N N 201 HIS CA C N S 202 HIS C C N N 203 HIS O O N N 204 HIS CB C N N 205 HIS CG C Y N 206 HIS ND1 N Y N 207 HIS CD2 C Y N 208 HIS CE1 C Y N 209 HIS NE2 N Y N 210 HIS OXT O N N 211 HIS H H N N 212 HIS H2 H N N 213 HIS HA H N N 214 HIS HB2 H N N 215 HIS HB3 H N N 216 HIS HD1 H N N 217 HIS HD2 H N N 218 HIS HE1 H N N 219 HIS HE2 H N N 220 HIS HXT H N N 221 HOH O O N N 222 HOH H1 H N N 223 HOH H2 H N N 224 ILE N N N N 225 ILE CA C N S 226 ILE C C N N 227 ILE O O N N 228 ILE CB C N S 229 ILE CG1 C N N 230 ILE CG2 C N N 231 ILE CD1 C N N 232 ILE OXT O N N 233 ILE H H N N 234 ILE H2 H N N 235 ILE HA H N N 236 ILE HB H N N 237 ILE HG12 H N N 238 ILE HG13 H N N 239 ILE HG21 H N N 240 ILE HG22 H N N 241 ILE HG23 H N N 242 ILE HD11 H N N 243 ILE HD12 H N N 244 ILE HD13 H N N 245 ILE HXT H N N 246 LEU N N N N 247 LEU CA C N S 248 LEU C C N N 249 LEU O O N N 250 LEU CB C N N 251 LEU CG C N N 252 LEU CD1 C N N 253 LEU CD2 C N N 254 LEU OXT O N N 255 LEU H H N N 256 LEU H2 H N N 257 LEU HA H N N 258 LEU HB2 H N N 259 LEU HB3 H N N 260 LEU HG H N N 261 LEU HD11 H N N 262 LEU HD12 H N N 263 LEU HD13 H N N 264 LEU HD21 H N N 265 LEU HD22 H N N 266 LEU HD23 H N N 267 LEU HXT H N N 268 LYS N N N N 269 LYS CA C N S 270 LYS C C N N 271 LYS O O N N 272 LYS CB C N N 273 LYS CG C N N 274 LYS CD C N N 275 LYS CE C N N 276 LYS NZ N N N 277 LYS OXT O N N 278 LYS H H N N 279 LYS H2 H N N 280 LYS HA H N N 281 LYS HB2 H N N 282 LYS HB3 H N N 283 LYS HG2 H N N 284 LYS HG3 H N N 285 LYS HD2 H N N 286 LYS HD3 H N N 287 LYS HE2 H N N 288 LYS HE3 H N N 289 LYS HZ1 H N N 290 LYS HZ2 H N N 291 LYS HZ3 H N N 292 LYS HXT H N N 293 MET N N N N 294 MET CA C N S 295 MET C C N N 296 MET O O N N 297 MET CB C N N 298 MET CG C N N 299 MET SD S N N 300 MET CE C N N 301 MET OXT O N N 302 MET H H N N 303 MET H2 H N N 304 MET HA H N N 305 MET HB2 H N N 306 MET HB3 H N N 307 MET HG2 H N N 308 MET HG3 H N N 309 MET HE1 H N N 310 MET HE2 H N N 311 MET HE3 H N N 312 MET HXT H N N 313 MG MG MG N N 314 PHE N N N N 315 PHE CA C N S 316 PHE C C N N 317 PHE O O N N 318 PHE CB C N N 319 PHE CG C Y N 320 PHE CD1 C Y N 321 PHE CD2 C Y N 322 PHE CE1 C Y N 323 PHE CE2 C Y N 324 PHE CZ C Y N 325 PHE OXT O N N 326 PHE H H N N 327 PHE H2 H N N 328 PHE HA H N N 329 PHE HB2 H N N 330 PHE HB3 H N N 331 PHE HD1 H N N 332 PHE HD2 H N N 333 PHE HE1 H N N 334 PHE HE2 H N N 335 PHE HZ H N N 336 PHE HXT H N N 337 PRO N N N N 338 PRO CA C N S 339 PRO C C N N 340 PRO O O N N 341 PRO CB C N N 342 PRO CG C N N 343 PRO CD C N N 344 PRO OXT O N N 345 PRO H H N N 346 PRO HA H N N 347 PRO HB2 H N N 348 PRO HB3 H N N 349 PRO HG2 H N N 350 PRO HG3 H N N 351 PRO HD2 H N N 352 PRO HD3 H N N 353 PRO HXT H N N 354 SER N N N N 355 SER CA C N S 356 SER C C N N 357 SER O O N N 358 SER CB C N N 359 SER OG O N N 360 SER OXT O N N 361 SER H H N N 362 SER H2 H N N 363 SER HA H N N 364 SER HB2 H N N 365 SER HB3 H N N 366 SER HG H N N 367 SER HXT H N N 368 THR N N N N 369 THR CA C N S 370 THR C C N N 371 THR O O N N 372 THR CB C N R 373 THR OG1 O N N 374 THR CG2 C N N 375 THR OXT O N N 376 THR H H N N 377 THR H2 H N N 378 THR HA H N N 379 THR HB H N N 380 THR HG1 H N N 381 THR HG21 H N N 382 THR HG22 H N N 383 THR HG23 H N N 384 THR HXT H N N 385 TRP N N N N 386 TRP CA C N S 387 TRP C C N N 388 TRP O O N N 389 TRP CB C N N 390 TRP CG C Y N 391 TRP CD1 C Y N 392 TRP CD2 C Y N 393 TRP NE1 N Y N 394 TRP CE2 C Y N 395 TRP CE3 C Y N 396 TRP CZ2 C Y N 397 TRP CZ3 C Y N 398 TRP CH2 C Y N 399 TRP OXT O N N 400 TRP H H N N 401 TRP H2 H N N 402 TRP HA H N N 403 TRP HB2 H N N 404 TRP HB3 H N N 405 TRP HD1 H N N 406 TRP HE1 H N N 407 TRP HE3 H N N 408 TRP HZ2 H N N 409 TRP HZ3 H N N 410 TRP HH2 H N N 411 TRP HXT H N N 412 TYR N N N N 413 TYR CA C N S 414 TYR C C N N 415 TYR O O N N 416 TYR CB C N N 417 TYR CG C Y N 418 TYR CD1 C Y N 419 TYR CD2 C Y N 420 TYR CE1 C Y N 421 TYR CE2 C Y N 422 TYR CZ C Y N 423 TYR OH O N N 424 TYR OXT O N N 425 TYR H H N N 426 TYR H2 H N N 427 TYR HA H N N 428 TYR HB2 H N N 429 TYR HB3 H N N 430 TYR HD1 H N N 431 TYR HD2 H N N 432 TYR HE1 H N N 433 TYR HE2 H N N 434 TYR HH H N N 435 TYR HXT H N N 436 VAL N N N N 437 VAL CA C N S 438 VAL C C N N 439 VAL O O N N 440 VAL CB C N N 441 VAL CG1 C N N 442 VAL CG2 C N N 443 VAL OXT O N N 444 VAL H H N N 445 VAL H2 H N N 446 VAL HA H N N 447 VAL HB H N N 448 VAL HG11 H N N 449 VAL HG12 H N N 450 VAL HG13 H N N 451 VAL HG21 H N N 452 VAL HG22 H N N 453 VAL HG23 H N N 454 VAL HXT H N N 455 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACT C O doub N N 1 ACT C OXT sing N N 2 ACT C CH3 sing N N 3 ACT CH3 H1 sing N N 4 ACT CH3 H2 sing N N 5 ACT CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 CYS N CA sing N N 76 CYS N H sing N N 77 CYS N H2 sing N N 78 CYS CA C sing N N 79 CYS CA CB sing N N 80 CYS CA HA sing N N 81 CYS C O doub N N 82 CYS C OXT sing N N 83 CYS CB SG sing N N 84 CYS CB HB2 sing N N 85 CYS CB HB3 sing N N 86 CYS SG HG sing N N 87 CYS OXT HXT sing N N 88 GDP PB O1B doub N N 89 GDP PB O2B sing N N 90 GDP PB O3B sing N N 91 GDP PB O3A sing N N 92 GDP O2B HOB2 sing N N 93 GDP O3B HOB3 sing N N 94 GDP O3A PA sing N N 95 GDP PA O1A doub N N 96 GDP PA O2A sing N N 97 GDP PA "O5'" sing N N 98 GDP O2A HOA2 sing N N 99 GDP "O5'" "C5'" sing N N 100 GDP "C5'" "C4'" sing N N 101 GDP "C5'" "H5'" sing N N 102 GDP "C5'" "H5''" sing N N 103 GDP "C4'" "O4'" sing N N 104 GDP "C4'" "C3'" sing N N 105 GDP "C4'" "H4'" sing N N 106 GDP "O4'" "C1'" sing N N 107 GDP "C3'" "O3'" sing N N 108 GDP "C3'" "C2'" sing N N 109 GDP "C3'" "H3'" sing N N 110 GDP "O3'" "HO3'" sing N N 111 GDP "C2'" "O2'" sing N N 112 GDP "C2'" "C1'" sing N N 113 GDP "C2'" "H2'" sing N N 114 GDP "O2'" "HO2'" sing N N 115 GDP "C1'" N9 sing N N 116 GDP "C1'" "H1'" sing N N 117 GDP N9 C8 sing Y N 118 GDP N9 C4 sing Y N 119 GDP C8 N7 doub Y N 120 GDP C8 H8 sing N N 121 GDP N7 C5 sing Y N 122 GDP C5 C6 sing N N 123 GDP C5 C4 doub Y N 124 GDP C6 O6 doub N N 125 GDP C6 N1 sing N N 126 GDP N1 C2 sing N N 127 GDP N1 HN1 sing N N 128 GDP C2 N2 sing N N 129 GDP C2 N3 doub N N 130 GDP N2 HN21 sing N N 131 GDP N2 HN22 sing N N 132 GDP N3 C4 sing N N 133 GLN N CA sing N N 134 GLN N H sing N N 135 GLN N H2 sing N N 136 GLN CA C sing N N 137 GLN CA CB sing N N 138 GLN CA HA sing N N 139 GLN C O doub N N 140 GLN C OXT sing N N 141 GLN CB CG sing N N 142 GLN CB HB2 sing N N 143 GLN CB HB3 sing N N 144 GLN CG CD sing N N 145 GLN CG HG2 sing N N 146 GLN CG HG3 sing N N 147 GLN CD OE1 doub N N 148 GLN CD NE2 sing N N 149 GLN NE2 HE21 sing N N 150 GLN NE2 HE22 sing N N 151 GLN OXT HXT sing N N 152 GLU N CA sing N N 153 GLU N H sing N N 154 GLU N H2 sing N N 155 GLU CA C sing N N 156 GLU CA CB sing N N 157 GLU CA HA sing N N 158 GLU C O doub N N 159 GLU C OXT sing N N 160 GLU CB CG sing N N 161 GLU CB HB2 sing N N 162 GLU CB HB3 sing N N 163 GLU CG CD sing N N 164 GLU CG HG2 sing N N 165 GLU CG HG3 sing N N 166 GLU CD OE1 doub N N 167 GLU CD OE2 sing N N 168 GLU OE2 HE2 sing N N 169 GLU OXT HXT sing N N 170 GLY N CA sing N N 171 GLY N H sing N N 172 GLY N H2 sing N N 173 GLY CA C sing N N 174 GLY CA HA2 sing N N 175 GLY CA HA3 sing N N 176 GLY C O doub N N 177 GLY C OXT sing N N 178 GLY OXT HXT sing N N 179 GOL C1 O1 sing N N 180 GOL C1 C2 sing N N 181 GOL C1 H11 sing N N 182 GOL C1 H12 sing N N 183 GOL O1 HO1 sing N N 184 GOL C2 O2 sing N N 185 GOL C2 C3 sing N N 186 GOL C2 H2 sing N N 187 GOL O2 HO2 sing N N 188 GOL C3 O3 sing N N 189 GOL C3 H31 sing N N 190 GOL C3 H32 sing N N 191 GOL O3 HO3 sing N N 192 HIS N CA sing N N 193 HIS N H sing N N 194 HIS N H2 sing N N 195 HIS CA C sing N N 196 HIS CA CB sing N N 197 HIS CA HA sing N N 198 HIS C O doub N N 199 HIS C OXT sing N N 200 HIS CB CG sing N N 201 HIS CB HB2 sing N N 202 HIS CB HB3 sing N N 203 HIS CG ND1 sing Y N 204 HIS CG CD2 doub Y N 205 HIS ND1 CE1 doub Y N 206 HIS ND1 HD1 sing N N 207 HIS CD2 NE2 sing Y N 208 HIS CD2 HD2 sing N N 209 HIS CE1 NE2 sing Y N 210 HIS CE1 HE1 sing N N 211 HIS NE2 HE2 sing N N 212 HIS OXT HXT sing N N 213 HOH O H1 sing N N 214 HOH O H2 sing N N 215 ILE N CA sing N N 216 ILE N H sing N N 217 ILE N H2 sing N N 218 ILE CA C sing N N 219 ILE CA CB sing N N 220 ILE CA HA sing N N 221 ILE C O doub N N 222 ILE C OXT sing N N 223 ILE CB CG1 sing N N 224 ILE CB CG2 sing N N 225 ILE CB HB sing N N 226 ILE CG1 CD1 sing N N 227 ILE CG1 HG12 sing N N 228 ILE CG1 HG13 sing N N 229 ILE CG2 HG21 sing N N 230 ILE CG2 HG22 sing N N 231 ILE CG2 HG23 sing N N 232 ILE CD1 HD11 sing N N 233 ILE CD1 HD12 sing N N 234 ILE CD1 HD13 sing N N 235 ILE OXT HXT sing N N 236 LEU N CA sing N N 237 LEU N H sing N N 238 LEU N H2 sing N N 239 LEU CA C sing N N 240 LEU CA CB sing N N 241 LEU CA HA sing N N 242 LEU C O doub N N 243 LEU C OXT sing N N 244 LEU CB CG sing N N 245 LEU CB HB2 sing N N 246 LEU CB HB3 sing N N 247 LEU CG CD1 sing N N 248 LEU CG CD2 sing N N 249 LEU CG HG sing N N 250 LEU CD1 HD11 sing N N 251 LEU CD1 HD12 sing N N 252 LEU CD1 HD13 sing N N 253 LEU CD2 HD21 sing N N 254 LEU CD2 HD22 sing N N 255 LEU CD2 HD23 sing N N 256 LEU OXT HXT sing N N 257 LYS N CA sing N N 258 LYS N H sing N N 259 LYS N H2 sing N N 260 LYS CA C sing N N 261 LYS CA CB sing N N 262 LYS CA HA sing N N 263 LYS C O doub N N 264 LYS C OXT sing N N 265 LYS CB CG sing N N 266 LYS CB HB2 sing N N 267 LYS CB HB3 sing N N 268 LYS CG CD sing N N 269 LYS CG HG2 sing N N 270 LYS CG HG3 sing N N 271 LYS CD CE sing N N 272 LYS CD HD2 sing N N 273 LYS CD HD3 sing N N 274 LYS CE NZ sing N N 275 LYS CE HE2 sing N N 276 LYS CE HE3 sing N N 277 LYS NZ HZ1 sing N N 278 LYS NZ HZ2 sing N N 279 LYS NZ HZ3 sing N N 280 LYS OXT HXT sing N N 281 MET N CA sing N N 282 MET N H sing N N 283 MET N H2 sing N N 284 MET CA C sing N N 285 MET CA CB sing N N 286 MET CA HA sing N N 287 MET C O doub N N 288 MET C OXT sing N N 289 MET CB CG sing N N 290 MET CB HB2 sing N N 291 MET CB HB3 sing N N 292 MET CG SD sing N N 293 MET CG HG2 sing N N 294 MET CG HG3 sing N N 295 MET SD CE sing N N 296 MET CE HE1 sing N N 297 MET CE HE2 sing N N 298 MET CE HE3 sing N N 299 MET OXT HXT sing N N 300 PHE N CA sing N N 301 PHE N H sing N N 302 PHE N H2 sing N N 303 PHE CA C sing N N 304 PHE CA CB sing N N 305 PHE CA HA sing N N 306 PHE C O doub N N 307 PHE C OXT sing N N 308 PHE CB CG sing N N 309 PHE CB HB2 sing N N 310 PHE CB HB3 sing N N 311 PHE CG CD1 doub Y N 312 PHE CG CD2 sing Y N 313 PHE CD1 CE1 sing Y N 314 PHE CD1 HD1 sing N N 315 PHE CD2 CE2 doub Y N 316 PHE CD2 HD2 sing N N 317 PHE CE1 CZ doub Y N 318 PHE CE1 HE1 sing N N 319 PHE CE2 CZ sing Y N 320 PHE CE2 HE2 sing N N 321 PHE CZ HZ sing N N 322 PHE OXT HXT sing N N 323 PRO N CA sing N N 324 PRO N CD sing N N 325 PRO N H sing N N 326 PRO CA C sing N N 327 PRO CA CB sing N N 328 PRO CA HA sing N N 329 PRO C O doub N N 330 PRO C OXT sing N N 331 PRO CB CG sing N N 332 PRO CB HB2 sing N N 333 PRO CB HB3 sing N N 334 PRO CG CD sing N N 335 PRO CG HG2 sing N N 336 PRO CG HG3 sing N N 337 PRO CD HD2 sing N N 338 PRO CD HD3 sing N N 339 PRO OXT HXT sing N N 340 SER N CA sing N N 341 SER N H sing N N 342 SER N H2 sing N N 343 SER CA C sing N N 344 SER CA CB sing N N 345 SER CA HA sing N N 346 SER C O doub N N 347 SER C OXT sing N N 348 SER CB OG sing N N 349 SER CB HB2 sing N N 350 SER CB HB3 sing N N 351 SER OG HG sing N N 352 SER OXT HXT sing N N 353 THR N CA sing N N 354 THR N H sing N N 355 THR N H2 sing N N 356 THR CA C sing N N 357 THR CA CB sing N N 358 THR CA HA sing N N 359 THR C O doub N N 360 THR C OXT sing N N 361 THR CB OG1 sing N N 362 THR CB CG2 sing N N 363 THR CB HB sing N N 364 THR OG1 HG1 sing N N 365 THR CG2 HG21 sing N N 366 THR CG2 HG22 sing N N 367 THR CG2 HG23 sing N N 368 THR OXT HXT sing N N 369 TRP N CA sing N N 370 TRP N H sing N N 371 TRP N H2 sing N N 372 TRP CA C sing N N 373 TRP CA CB sing N N 374 TRP CA HA sing N N 375 TRP C O doub N N 376 TRP C OXT sing N N 377 TRP CB CG sing N N 378 TRP CB HB2 sing N N 379 TRP CB HB3 sing N N 380 TRP CG CD1 doub Y N 381 TRP CG CD2 sing Y N 382 TRP CD1 NE1 sing Y N 383 TRP CD1 HD1 sing N N 384 TRP CD2 CE2 doub Y N 385 TRP CD2 CE3 sing Y N 386 TRP NE1 CE2 sing Y N 387 TRP NE1 HE1 sing N N 388 TRP CE2 CZ2 sing Y N 389 TRP CE3 CZ3 doub Y N 390 TRP CE3 HE3 sing N N 391 TRP CZ2 CH2 doub Y N 392 TRP CZ2 HZ2 sing N N 393 TRP CZ3 CH2 sing Y N 394 TRP CZ3 HZ3 sing N N 395 TRP CH2 HH2 sing N N 396 TRP OXT HXT sing N N 397 TYR N CA sing N N 398 TYR N H sing N N 399 TYR N H2 sing N N 400 TYR CA C sing N N 401 TYR CA CB sing N N 402 TYR CA HA sing N N 403 TYR C O doub N N 404 TYR C OXT sing N N 405 TYR CB CG sing N N 406 TYR CB HB2 sing N N 407 TYR CB HB3 sing N N 408 TYR CG CD1 doub Y N 409 TYR CG CD2 sing Y N 410 TYR CD1 CE1 sing Y N 411 TYR CD1 HD1 sing N N 412 TYR CD2 CE2 doub Y N 413 TYR CD2 HD2 sing N N 414 TYR CE1 CZ doub Y N 415 TYR CE1 HE1 sing N N 416 TYR CE2 CZ sing Y N 417 TYR CE2 HE2 sing N N 418 TYR CZ OH sing N N 419 TYR OH HH sing N N 420 TYR OXT HXT sing N N 421 VAL N CA sing N N 422 VAL N H sing N N 423 VAL N H2 sing N N 424 VAL CA C sing N N 425 VAL CA CB sing N N 426 VAL CA HA sing N N 427 VAL C O doub N N 428 VAL C OXT sing N N 429 VAL CB CG1 sing N N 430 VAL CB CG2 sing N N 431 VAL CB HB sing N N 432 VAL CG1 HG11 sing N N 433 VAL CG1 HG12 sing N N 434 VAL CG1 HG13 sing N N 435 VAL CG2 HG21 sing N N 436 VAL CG2 HG22 sing N N 437 VAL CG2 HG23 sing N N 438 VAL OXT HXT sing N N 439 # _pdbx_audit_support.funding_organization 'Council of Scientific & Industrial Research (CSIR)' _pdbx_audit_support.country India _pdbx_audit_support.grant_number MLP007 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id GDP _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id GDP _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-DIPHOSPHATE" GDP 3 GLYCEROL GOL 4 'ACETATE ION' ACT 5 'MAGNESIUM ION' MG 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2HEI _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details 'Size exclusion chromatography purification was done using Superdex-75 10/300GL column (GE Healthcare, Chicago, IL)' #