HEADER ANTITOXIN/DNA 13-NOV-19 6LB3 TITLE CRYSTAL STRUCTURE OF PA4674 IN COMPLEX WITH ITS OPERATOR DNA (18BP) TITLE 2 FROM PSEUDOMONAS AERUGINOSA COMPND MOL_ID: 1; COMPND 2 MOLECULE: HTH CRO/C1-TYPE DOMAIN-CONTAINING PROTEIN; COMPND 3 CHAIN: A, B, C, D, E, F, G, H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (5'- COMPND 7 D(P*AP*CP*GP*CP*TP*TP*AP*AP*CP*GP*TP*TP*AP*AP*GP*GP*GP*T)-3'); COMPND 8 CHAIN: I, K, M; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: DNA (5'- COMPND 12 D(P*AP*CP*CP*CP*TP*TP*AP*AP*CP*GP*TP*TP*AP*AP*GP*CP*GP*T)-3'); COMPND 13 CHAIN: J, L, N; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA (STRAIN ATCC 15692 / DSM SOURCE 3 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SOURCE 4 ORGANISM_TAXID: 208964; SOURCE 5 GENE: PA4674; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 11 ORGANISM_TAXID: 287; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 15 ORGANISM_TAXID: 287 KEYWDS TOXIN ANTITOXIN SYSTEM, TRANSCRIPTION REGULATOR, DNA BINDING PROTEIN, KEYWDS 2 ANTITOXIN, ANTITOXIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.LIU,H.ZHANG,Z.GAO,Y.DONG REVDAT 2 22-NOV-23 6LB3 1 REMARK REVDAT 1 18-NOV-20 6LB3 0 JRNL AUTH Y.LIU,H.ZHANG,Z.GAO,Y.DONG JRNL TITL CRYSTAL STRUCTURE OF PA4674 IN COMPLEX WITH ITS OPERATOR DNA JRNL TITL 2 (18BP) FROM PSEUDOMONAS AERUGINOSA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 47321 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.220 REMARK 3 FREE R VALUE TEST SET COUNT : 1995 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.2010 - 6.0148 0.99 3368 149 0.1815 0.2156 REMARK 3 2 6.0148 - 4.7756 1.00 3276 144 0.2008 0.2300 REMARK 3 3 4.7756 - 4.1723 1.00 3327 146 0.1798 0.2226 REMARK 3 4 4.1723 - 3.7910 1.00 3296 145 0.1874 0.2199 REMARK 3 5 3.7910 - 3.5194 1.00 3283 145 0.2240 0.2738 REMARK 3 6 3.5194 - 3.3120 0.98 3216 141 0.2198 0.2677 REMARK 3 7 3.3120 - 3.1461 0.98 3238 142 0.2479 0.3018 REMARK 3 8 3.1461 - 3.0092 0.99 3215 142 0.2608 0.3618 REMARK 3 9 3.0092 - 2.8934 0.99 3240 143 0.2673 0.2809 REMARK 3 10 2.8934 - 2.7935 0.99 3263 143 0.2696 0.3115 REMARK 3 11 2.7935 - 2.7062 0.98 3192 141 0.2867 0.3744 REMARK 3 12 2.7062 - 2.6289 0.99 3233 142 0.3000 0.3668 REMARK 3 13 2.6289 - 2.5597 0.98 3249 144 0.3052 0.3581 REMARK 3 14 2.5597 - 2.4972 0.91 2930 128 0.3266 0.3656 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 52.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 7911 REMARK 3 ANGLE : 1.179 11064 REMARK 3 CHIRALITY : 0.060 1220 REMARK 3 PLANARITY : 0.007 1144 REMARK 3 DIHEDRAL : 22.259 4462 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6LB3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1300014482. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47794 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.497 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.93100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.640 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3TRB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES, 35% MPD, 0.2M LITHIUM REMARK 280 SULFATE, PH 6.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 47.78500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: M, N REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -102.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, G, H, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -103.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, E, F, K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 THR A 3 REMARK 465 ASN A 4 REMARK 465 GLY A 5 REMARK 465 MET A 6 REMARK 465 LEU A 98 REMARK 465 ALA A 99 REMARK 465 HIS A 100 REMARK 465 GLY A 101 REMARK 465 GLY A 102 REMARK 465 SER A 103 REMARK 465 HIS A 104 REMARK 465 HIS A 105 REMARK 465 HIS A 106 REMARK 465 HIS A 107 REMARK 465 HIS A 108 REMARK 465 HIS A 109 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 THR B 3 REMARK 465 ASN B 4 REMARK 465 LEU B 98 REMARK 465 ALA B 99 REMARK 465 HIS B 100 REMARK 465 GLY B 101 REMARK 465 GLY B 102 REMARK 465 SER B 103 REMARK 465 HIS B 104 REMARK 465 HIS B 105 REMARK 465 HIS B 106 REMARK 465 HIS B 107 REMARK 465 HIS B 108 REMARK 465 HIS B 109 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 THR C 3 REMARK 465 ASN C 4 REMARK 465 LEU C 98 REMARK 465 ALA C 99 REMARK 465 HIS C 100 REMARK 465 GLY C 101 REMARK 465 GLY C 102 REMARK 465 SER C 103 REMARK 465 HIS C 104 REMARK 465 HIS C 105 REMARK 465 HIS C 106 REMARK 465 HIS C 107 REMARK 465 HIS C 108 REMARK 465 HIS C 109 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 THR D 3 REMARK 465 ASN D 4 REMARK 465 GLY D 5 REMARK 465 LEU D 98 REMARK 465 ALA D 99 REMARK 465 HIS D 100 REMARK 465 GLY D 101 REMARK 465 GLY D 102 REMARK 465 SER D 103 REMARK 465 HIS D 104 REMARK 465 HIS D 105 REMARK 465 HIS D 106 REMARK 465 HIS D 107 REMARK 465 HIS D 108 REMARK 465 HIS D 109 REMARK 465 MET E 1 REMARK 465 ALA E 2 REMARK 465 THR E 3 REMARK 465 ASN E 4 REMARK 465 GLY E 5 REMARK 465 PRO E 96 REMARK 465 LEU E 97 REMARK 465 LEU E 98 REMARK 465 ALA E 99 REMARK 465 HIS E 100 REMARK 465 GLY E 101 REMARK 465 GLY E 102 REMARK 465 SER E 103 REMARK 465 HIS E 104 REMARK 465 HIS E 105 REMARK 465 HIS E 106 REMARK 465 HIS E 107 REMARK 465 HIS E 108 REMARK 465 HIS E 109 REMARK 465 MET F 1 REMARK 465 ALA F 2 REMARK 465 THR F 3 REMARK 465 ASN F 4 REMARK 465 GLY F 5 REMARK 465 ALA F 99 REMARK 465 HIS F 100 REMARK 465 GLY F 101 REMARK 465 GLY F 102 REMARK 465 SER F 103 REMARK 465 HIS F 104 REMARK 465 HIS F 105 REMARK 465 HIS F 106 REMARK 465 HIS F 107 REMARK 465 HIS F 108 REMARK 465 HIS F 109 REMARK 465 MET G 1 REMARK 465 ALA G 2 REMARK 465 THR G 3 REMARK 465 ASN G 4 REMARK 465 GLY G 5 REMARK 465 MET G 6 REMARK 465 ARG G 7 REMARK 465 PRO G 96 REMARK 465 LEU G 97 REMARK 465 LEU G 98 REMARK 465 ALA G 99 REMARK 465 HIS G 100 REMARK 465 GLY G 101 REMARK 465 GLY G 102 REMARK 465 SER G 103 REMARK 465 HIS G 104 REMARK 465 HIS G 105 REMARK 465 HIS G 106 REMARK 465 HIS G 107 REMARK 465 HIS G 108 REMARK 465 HIS G 109 REMARK 465 MET H 1 REMARK 465 ALA H 2 REMARK 465 THR H 3 REMARK 465 ASN H 4 REMARK 465 HIS H 100 REMARK 465 GLY H 101 REMARK 465 GLY H 102 REMARK 465 SER H 103 REMARK 465 HIS H 104 REMARK 465 HIS H 105 REMARK 465 HIS H 106 REMARK 465 HIS H 107 REMARK 465 HIS H 108 REMARK 465 HIS H 109 REMARK 465 DA M 8 REMARK 465 DC M 9 REMARK 465 DG M 10 REMARK 465 DT M 11 REMARK 465 DT M 12 REMARK 465 DA M 13 REMARK 465 DA M 14 REMARK 465 DG M 15 REMARK 465 DG M 16 REMARK 465 DG M 17 REMARK 465 DT M 18 REMARK 465 DA N 1 REMARK 465 DC N 2 REMARK 465 DC N 3 REMARK 465 DC N 4 REMARK 465 DT N 5 REMARK 465 DT N 6 REMARK 465 DA N 7 REMARK 465 DA N 8 REMARK 465 DC N 9 REMARK 465 DG N 10 REMARK 465 DT N 11 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP G 17 CB CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT I 6 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DG K 16 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DA L 1 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DA M 1 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DA M 7 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DA N 13 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 18 -13.54 66.15 REMARK 500 PHE A 19 -61.48 -138.60 REMARK 500 ALA A 84 -44.21 81.27 REMARK 500 ASN A 86 10.72 -167.48 REMARK 500 PHE B 19 -67.25 -127.25 REMARK 500 ALA B 84 -38.32 68.05 REMARK 500 ASN B 86 31.66 -148.01 REMARK 500 LYS B 88 -53.17 60.36 REMARK 500 PHE C 19 -62.30 -137.37 REMARK 500 ASN C 86 -7.88 -168.28 REMARK 500 PHE D 19 -56.16 -127.07 REMARK 500 ALA D 84 -3.95 55.51 REMARK 500 LYS D 88 -13.71 66.26 REMARK 500 PHE E 19 -33.50 -141.26 REMARK 500 PHE E 23 -4.77 68.86 REMARK 500 ALA E 84 -1.96 66.38 REMARK 500 ILE E 90 8.29 -64.79 REMARK 500 GLU E 93 -92.75 -143.35 REMARK 500 ARG F 7 144.55 70.60 REMARK 500 ARG F 16 -70.35 -58.92 REMARK 500 PHE F 19 -53.55 -129.36 REMARK 500 ALA F 84 -13.52 66.86 REMARK 500 ARG G 16 -72.63 -57.56 REMARK 500 GLU G 18 -34.83 -149.71 REMARK 500 ALA G 84 -11.74 63.83 REMARK 500 LYS G 88 106.44 -40.31 REMARK 500 GLU G 93 -154.17 -135.41 REMARK 500 MET H 6 -52.27 -178.82 REMARK 500 GLU H 18 -29.51 45.73 REMARK 500 PHE H 19 -66.09 -125.67 REMARK 500 PHE H 23 -159.57 -114.63 REMARK 500 ASP H 64 -12.05 68.08 REMARK 500 ALA H 84 -13.47 65.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 G 201 DBREF 6LB3 A 1 101 UNP Q9HVC1 Q9HVC1_PSEAE 1 101 DBREF 6LB3 B 1 101 UNP Q9HVC1 Q9HVC1_PSEAE 1 101 DBREF 6LB3 C 1 101 UNP Q9HVC1 Q9HVC1_PSEAE 1 101 DBREF 6LB3 D 1 101 UNP Q9HVC1 Q9HVC1_PSEAE 1 101 DBREF 6LB3 E 1 101 UNP Q9HVC1 Q9HVC1_PSEAE 1 101 DBREF 6LB3 F 1 101 UNP Q9HVC1 Q9HVC1_PSEAE 1 101 DBREF 6LB3 G 1 101 UNP Q9HVC1 Q9HVC1_PSEAE 1 101 DBREF 6LB3 H 1 101 UNP Q9HVC1 Q9HVC1_PSEAE 1 101 DBREF 6LB3 I 1 18 PDB 6LB3 6LB3 1 18 DBREF 6LB3 J 1 18 PDB 6LB3 6LB3 1 18 DBREF 6LB3 K 1 18 PDB 6LB3 6LB3 1 18 DBREF 6LB3 L 1 18 PDB 6LB3 6LB3 1 18 DBREF 6LB3 M 1 18 PDB 6LB3 6LB3 1 18 DBREF 6LB3 N 1 18 PDB 6LB3 6LB3 1 18 SEQADV 6LB3 GLY A 102 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 SER A 103 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS A 104 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS A 105 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS A 106 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS A 107 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS A 108 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS A 109 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 GLY B 102 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 SER B 103 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS B 104 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS B 105 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS B 106 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS B 107 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS B 108 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS B 109 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 GLY C 102 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 SER C 103 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS C 104 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS C 105 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS C 106 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS C 107 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS C 108 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS C 109 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 GLY D 102 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 SER D 103 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS D 104 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS D 105 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS D 106 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS D 107 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS D 108 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS D 109 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 GLY E 102 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 SER E 103 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS E 104 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS E 105 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS E 106 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS E 107 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS E 108 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS E 109 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 GLY F 102 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 SER F 103 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS F 104 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS F 105 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS F 106 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS F 107 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS F 108 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS F 109 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 GLY G 102 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 SER G 103 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS G 104 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS G 105 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS G 106 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS G 107 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS G 108 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS G 109 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 GLY H 102 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 SER H 103 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS H 104 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS H 105 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS H 106 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS H 107 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS H 108 UNP Q9HVC1 EXPRESSION TAG SEQADV 6LB3 HIS H 109 UNP Q9HVC1 EXPRESSION TAG SEQRES 1 A 109 MET ALA THR ASN GLY MET ARG PRO ILE HIS PRO GLY GLU SEQRES 2 A 109 ILE LEU ARG ASP GLU PHE LEU MET GLU PHE ASP ILE SER SEQRES 3 A 109 PRO ALA ALA LEU ALA ARG ALA LEU LYS VAL SER ALA PRO SEQRES 4 A 109 THR VAL ASN ASP ILE VAL ARG GLU GLN ARG GLY ILE SER SEQRES 5 A 109 ALA ASP MET ALA ILE ARG LEU GLY ARG TYR PHE ASP THR SEQRES 6 A 109 SER ALA GLN PHE TRP MET ASN LEU GLN SER GLU TYR SER SEQRES 7 A 109 LEU ALA THR ALA TYR ALA ALA ASN GLY LYS GLN ILE GLU SEQRES 8 A 109 HIS GLU ILE GLU PRO LEU LEU ALA HIS GLY GLY SER HIS SEQRES 9 A 109 HIS HIS HIS HIS HIS SEQRES 1 B 109 MET ALA THR ASN GLY MET ARG PRO ILE HIS PRO GLY GLU SEQRES 2 B 109 ILE LEU ARG ASP GLU PHE LEU MET GLU PHE ASP ILE SER SEQRES 3 B 109 PRO ALA ALA LEU ALA ARG ALA LEU LYS VAL SER ALA PRO SEQRES 4 B 109 THR VAL ASN ASP ILE VAL ARG GLU GLN ARG GLY ILE SER SEQRES 5 B 109 ALA ASP MET ALA ILE ARG LEU GLY ARG TYR PHE ASP THR SEQRES 6 B 109 SER ALA GLN PHE TRP MET ASN LEU GLN SER GLU TYR SER SEQRES 7 B 109 LEU ALA THR ALA TYR ALA ALA ASN GLY LYS GLN ILE GLU SEQRES 8 B 109 HIS GLU ILE GLU PRO LEU LEU ALA HIS GLY GLY SER HIS SEQRES 9 B 109 HIS HIS HIS HIS HIS SEQRES 1 C 109 MET ALA THR ASN GLY MET ARG PRO ILE HIS PRO GLY GLU SEQRES 2 C 109 ILE LEU ARG ASP GLU PHE LEU MET GLU PHE ASP ILE SER SEQRES 3 C 109 PRO ALA ALA LEU ALA ARG ALA LEU LYS VAL SER ALA PRO SEQRES 4 C 109 THR VAL ASN ASP ILE VAL ARG GLU GLN ARG GLY ILE SER SEQRES 5 C 109 ALA ASP MET ALA ILE ARG LEU GLY ARG TYR PHE ASP THR SEQRES 6 C 109 SER ALA GLN PHE TRP MET ASN LEU GLN SER GLU TYR SER SEQRES 7 C 109 LEU ALA THR ALA TYR ALA ALA ASN GLY LYS GLN ILE GLU SEQRES 8 C 109 HIS GLU ILE GLU PRO LEU LEU ALA HIS GLY GLY SER HIS SEQRES 9 C 109 HIS HIS HIS HIS HIS SEQRES 1 D 109 MET ALA THR ASN GLY MET ARG PRO ILE HIS PRO GLY GLU SEQRES 2 D 109 ILE LEU ARG ASP GLU PHE LEU MET GLU PHE ASP ILE SER SEQRES 3 D 109 PRO ALA ALA LEU ALA ARG ALA LEU LYS VAL SER ALA PRO SEQRES 4 D 109 THR VAL ASN ASP ILE VAL ARG GLU GLN ARG GLY ILE SER SEQRES 5 D 109 ALA ASP MET ALA ILE ARG LEU GLY ARG TYR PHE ASP THR SEQRES 6 D 109 SER ALA GLN PHE TRP MET ASN LEU GLN SER GLU TYR SER SEQRES 7 D 109 LEU ALA THR ALA TYR ALA ALA ASN GLY LYS GLN ILE GLU SEQRES 8 D 109 HIS GLU ILE GLU PRO LEU LEU ALA HIS GLY GLY SER HIS SEQRES 9 D 109 HIS HIS HIS HIS HIS SEQRES 1 E 109 MET ALA THR ASN GLY MET ARG PRO ILE HIS PRO GLY GLU SEQRES 2 E 109 ILE LEU ARG ASP GLU PHE LEU MET GLU PHE ASP ILE SER SEQRES 3 E 109 PRO ALA ALA LEU ALA ARG ALA LEU LYS VAL SER ALA PRO SEQRES 4 E 109 THR VAL ASN ASP ILE VAL ARG GLU GLN ARG GLY ILE SER SEQRES 5 E 109 ALA ASP MET ALA ILE ARG LEU GLY ARG TYR PHE ASP THR SEQRES 6 E 109 SER ALA GLN PHE TRP MET ASN LEU GLN SER GLU TYR SER SEQRES 7 E 109 LEU ALA THR ALA TYR ALA ALA ASN GLY LYS GLN ILE GLU SEQRES 8 E 109 HIS GLU ILE GLU PRO LEU LEU ALA HIS GLY GLY SER HIS SEQRES 9 E 109 HIS HIS HIS HIS HIS SEQRES 1 F 109 MET ALA THR ASN GLY MET ARG PRO ILE HIS PRO GLY GLU SEQRES 2 F 109 ILE LEU ARG ASP GLU PHE LEU MET GLU PHE ASP ILE SER SEQRES 3 F 109 PRO ALA ALA LEU ALA ARG ALA LEU LYS VAL SER ALA PRO SEQRES 4 F 109 THR VAL ASN ASP ILE VAL ARG GLU GLN ARG GLY ILE SER SEQRES 5 F 109 ALA ASP MET ALA ILE ARG LEU GLY ARG TYR PHE ASP THR SEQRES 6 F 109 SER ALA GLN PHE TRP MET ASN LEU GLN SER GLU TYR SER SEQRES 7 F 109 LEU ALA THR ALA TYR ALA ALA ASN GLY LYS GLN ILE GLU SEQRES 8 F 109 HIS GLU ILE GLU PRO LEU LEU ALA HIS GLY GLY SER HIS SEQRES 9 F 109 HIS HIS HIS HIS HIS SEQRES 1 G 109 MET ALA THR ASN GLY MET ARG PRO ILE HIS PRO GLY GLU SEQRES 2 G 109 ILE LEU ARG ASP GLU PHE LEU MET GLU PHE ASP ILE SER SEQRES 3 G 109 PRO ALA ALA LEU ALA ARG ALA LEU LYS VAL SER ALA PRO SEQRES 4 G 109 THR VAL ASN ASP ILE VAL ARG GLU GLN ARG GLY ILE SER SEQRES 5 G 109 ALA ASP MET ALA ILE ARG LEU GLY ARG TYR PHE ASP THR SEQRES 6 G 109 SER ALA GLN PHE TRP MET ASN LEU GLN SER GLU TYR SER SEQRES 7 G 109 LEU ALA THR ALA TYR ALA ALA ASN GLY LYS GLN ILE GLU SEQRES 8 G 109 HIS GLU ILE GLU PRO LEU LEU ALA HIS GLY GLY SER HIS SEQRES 9 G 109 HIS HIS HIS HIS HIS SEQRES 1 H 109 MET ALA THR ASN GLY MET ARG PRO ILE HIS PRO GLY GLU SEQRES 2 H 109 ILE LEU ARG ASP GLU PHE LEU MET GLU PHE ASP ILE SER SEQRES 3 H 109 PRO ALA ALA LEU ALA ARG ALA LEU LYS VAL SER ALA PRO SEQRES 4 H 109 THR VAL ASN ASP ILE VAL ARG GLU GLN ARG GLY ILE SER SEQRES 5 H 109 ALA ASP MET ALA ILE ARG LEU GLY ARG TYR PHE ASP THR SEQRES 6 H 109 SER ALA GLN PHE TRP MET ASN LEU GLN SER GLU TYR SER SEQRES 7 H 109 LEU ALA THR ALA TYR ALA ALA ASN GLY LYS GLN ILE GLU SEQRES 8 H 109 HIS GLU ILE GLU PRO LEU LEU ALA HIS GLY GLY SER HIS SEQRES 9 H 109 HIS HIS HIS HIS HIS SEQRES 1 I 18 DA DC DG DC DT DT DA DA DC DG DT DT DA SEQRES 2 I 18 DA DG DG DG DT SEQRES 1 J 18 DA DC DC DC DT DT DA DA DC DG DT DT DA SEQRES 2 J 18 DA DG DC DG DT SEQRES 1 K 18 DA DC DG DC DT DT DA DA DC DG DT DT DA SEQRES 2 K 18 DA DG DG DG DT SEQRES 1 L 18 DA DC DC DC DT DT DA DA DC DG DT DT DA SEQRES 2 L 18 DA DG DC DG DT SEQRES 1 M 18 DA DC DG DC DT DT DA DA DC DG DT DT DA SEQRES 2 M 18 DA DG DG DG DT SEQRES 1 N 18 DA DC DC DC DT DT DA DA DC DG DT DT DA SEQRES 2 N 18 DA DG DC DG DT HET SO4 A 201 5 HET SO4 G 201 5 HETNAM SO4 SULFATE ION FORMUL 15 SO4 2(O4 S 2-) FORMUL 17 HOH *61(H2 O) HELIX 1 AA1 HIS A 10 ASP A 17 1 8 HELIX 2 AA2 PHE A 19 ASP A 24 1 6 HELIX 3 AA3 SER A 26 LEU A 34 1 9 HELIX 4 AA4 SER A 37 ARG A 46 1 10 HELIX 5 AA5 SER A 52 PHE A 63 1 12 HELIX 6 AA6 SER A 66 ASN A 86 1 21 HELIX 7 AA7 ASN A 86 ILE A 94 1 9 HELIX 8 AA8 HIS B 10 GLU B 18 1 9 HELIX 9 AA9 SER B 26 LYS B 35 1 10 HELIX 10 AB1 SER B 37 ARG B 46 1 10 HELIX 11 AB2 SER B 52 ASP B 64 1 13 HELIX 12 AB3 SER B 66 ASN B 86 1 21 HELIX 13 AB4 LYS B 88 ILE B 94 1 7 HELIX 14 AB5 HIS C 10 PHE C 19 1 10 HELIX 15 AB6 PHE C 19 ASP C 24 1 6 HELIX 16 AB7 SER C 26 LEU C 34 1 9 HELIX 17 AB8 SER C 37 ARG C 46 1 10 HELIX 18 AB9 SER C 52 ASP C 64 1 13 HELIX 19 AC1 SER C 66 TYR C 83 1 18 HELIX 20 AC2 ASN C 86 ILE C 94 1 9 HELIX 21 AC3 HIS D 10 PHE D 19 1 10 HELIX 22 AC4 PHE D 19 ASP D 24 1 6 HELIX 23 AC5 SER D 26 LYS D 35 1 10 HELIX 24 AC6 SER D 37 ARG D 46 1 10 HELIX 25 AC7 SER D 52 PHE D 63 1 12 HELIX 26 AC8 SER D 66 TYR D 83 1 18 HELIX 27 AC9 GLN D 89 ILE D 94 1 6 HELIX 28 AD1 HIS E 10 LEU E 20 1 11 HELIX 29 AD2 SER E 26 LYS E 35 1 10 HELIX 30 AD3 SER E 37 ARG E 46 1 10 HELIX 31 AD4 SER E 52 ASP E 64 1 13 HELIX 32 AD5 SER E 66 TYR E 83 1 18 HELIX 33 AD6 HIS F 10 PHE F 19 1 10 HELIX 34 AD7 SER F 26 LYS F 35 1 10 HELIX 35 AD8 SER F 37 ARG F 46 1 10 HELIX 36 AD9 SER F 52 ASP F 64 1 13 HELIX 37 AE1 SER F 66 TYR F 83 1 18 HELIX 38 AE2 ASN F 86 ILE F 94 1 9 HELIX 39 AE3 HIS G 10 PHE G 19 1 10 HELIX 40 AE4 SER G 26 LYS G 35 1 10 HELIX 41 AE5 SER G 37 ARG G 46 1 10 HELIX 42 AE6 SER G 52 PHE G 63 1 12 HELIX 43 AE7 SER G 66 TYR G 83 1 18 HELIX 44 AE8 HIS H 10 ASP H 17 1 8 HELIX 45 AE9 SER H 26 LYS H 35 1 10 HELIX 46 AF1 SER H 37 ARG H 46 1 10 HELIX 47 AF2 SER H 52 PHE H 63 1 12 HELIX 48 AF3 SER H 66 TYR H 83 1 18 HELIX 49 AF4 ASN H 86 ILE H 94 1 9 SITE 1 AC1 4 SER A 26 ARG A 32 HOH A 302 ARG D 32 SITE 1 AC2 4 SER F 26 ARG F 32 ARG G 32 HOH G 302 CRYST1 57.284 95.570 128.857 90.00 96.29 90.00 P 1 21 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017457 0.000000 0.001924 0.00000 SCALE2 0.000000 0.010464 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007808 0.00000