data_6M4T # _entry.id 6M4T # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6M4T pdb_00006m4t 10.2210/pdb6m4t/pdb WWPDB D_1300016057 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-07-15 2 'Structure model' 1 1 2024-03-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_struct_conn_angle 5 2 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 11 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 2 'Structure model' '_pdbx_struct_conn_angle.value' 18 2 'Structure model' '_struct_conn.conn_type_id' 19 2 'Structure model' '_struct_conn.id' 20 2 'Structure model' '_struct_conn.pdbx_dist_value' 21 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 22 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 23 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 24 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 25 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 26 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 27 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 28 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 29 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 30 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 31 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 32 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 33 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 34 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 35 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6M4T _pdbx_database_status.recvd_initial_deposition_date 2020-03-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Hou, M.H.' 1 ? 'Chien, C.M.' 2 ? 'Satange, R.B.' 3 ? 'Wu, P.C.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_id_ASTM JACSAT _citation.journal_id_CSD ? _citation.journal_id_ISSN 1520-5126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 142 _citation.language ? _citation.page_first 11165 _citation.page_last 11172 _citation.title ;Structural Basis for Targeting T:T Mismatch with Triaminotriazine-Acridine Conjugate Induces a U-Shaped Head-to-Head Four-Way Junction in CTG Repeat DNA. ; _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/jacs.0c03591 _citation.pdbx_database_id_PubMed 32478511 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chien, C.M.' 1 ? primary 'Wu, P.C.' 2 ? primary 'Satange, R.' 3 ? primary 'Chang, C.C.' 4 0000-0002-0622-019X primary 'Lai, Z.L.' 5 ? primary 'Hagler, L.D.' 6 ? primary 'Zimmerman, S.C.' 7 0000-0002-5333-3437 primary 'Hou, M.H.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(P*(UD)P*TP*CP*TP*GP*CP*TP*GP*CP*TP*GP*AP*A)-3') ; 4022.453 4 ? ? ? ? 2 non-polymer syn 'COBALT (II) ION' 58.933 4 ? ? ? ? 3 non-polymer syn 'N4-[4-[(6-chloranyl-2-methoxy-acridin-9-yl)amino]butyl]-1,3,5-triazine-2,4,6-triamine' 438.913 4 ? ? ? ? 4 water nat water 18.015 207 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(BRU)(DT)(DC)(DT)(DG)(DC)(DT)(DG)(DC)(DT)(DG)(DA)(DA)' _entity_poly.pdbx_seq_one_letter_code_can UTCTGCTGCTGAA _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'COBALT (II) ION' CO 3 'N4-[4-[(6-chloranyl-2-methoxy-acridin-9-yl)amino]butyl]-1,3,5-triazine-2,4,6-triamine' F1R 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 BRU n 1 2 DT n 1 3 DC n 1 4 DT n 1 5 DG n 1 6 DC n 1 7 DT n 1 8 DG n 1 9 DC n 1 10 DT n 1 11 DG n 1 12 DA n 1 13 DA n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 13 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight BRU 'DNA linking' n "5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H12 Br N2 O8 P' 387.078 CO non-polymer . 'COBALT (II) ION' ? 'Co 2' 58.933 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 F1R non-polymer . 'N4-[4-[(6-chloranyl-2-methoxy-acridin-9-yl)amino]butyl]-1,3,5-triazine-2,4,6-triamine' ? 'C21 H23 Cl N8 O' 438.913 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 BRU 1 1 1 BRU BRU A . n A 1 2 DT 2 2 2 DT DT A . n A 1 3 DC 3 3 3 DC DC A . n A 1 4 DT 4 4 4 DT DT A . n A 1 5 DG 5 5 5 DG DG A . n A 1 6 DC 6 6 6 DC DC A . n A 1 7 DT 7 7 7 DT DT A . n A 1 8 DG 8 8 8 DG DG A . n A 1 9 DC 9 9 9 DC DC A . n A 1 10 DT 10 10 10 DT DT A . n A 1 11 DG 11 11 11 DG DG A . n A 1 12 DA 12 12 12 DA DA A . n A 1 13 DA 13 13 13 DA DA A . n B 1 1 BRU 1 1 1 BRU BRU B . n B 1 2 DT 2 2 2 DT DT B . n B 1 3 DC 3 3 3 DC DC B . n B 1 4 DT 4 4 4 DT DT B . n B 1 5 DG 5 5 5 DG DG B . n B 1 6 DC 6 6 6 DC DC B . n B 1 7 DT 7 7 7 DT DT B . n B 1 8 DG 8 8 8 DG DG B . n B 1 9 DC 9 9 9 DC DC B . n B 1 10 DT 10 10 10 DT DT B . n B 1 11 DG 11 11 11 DG DG B . n B 1 12 DA 12 12 12 DA DA B . n B 1 13 DA 13 13 13 DA DA B . n C 1 1 BRU 1 1 1 BRU BRU C . n C 1 2 DT 2 2 2 DT DT C . n C 1 3 DC 3 3 3 DC DC C . n C 1 4 DT 4 4 4 DT DT C . n C 1 5 DG 5 5 5 DG DG C . n C 1 6 DC 6 6 6 DC DC C . n C 1 7 DT 7 7 7 DT DT C . n C 1 8 DG 8 8 8 DG DG C . n C 1 9 DC 9 9 9 DC DC C . n C 1 10 DT 10 10 10 DT DT C . n C 1 11 DG 11 11 11 DG DG C . n C 1 12 DA 12 12 12 DA DA C . n C 1 13 DA 13 13 13 DA DA C . n D 1 1 BRU 1 1 1 BRU BRU D . n D 1 2 DT 2 2 2 DT DT D . n D 1 3 DC 3 3 3 DC DC D . n D 1 4 DT 4 4 4 DT DT D . n D 1 5 DG 5 5 5 DG DG D . n D 1 6 DC 6 6 6 DC DC D . n D 1 7 DT 7 7 7 DT DT D . n D 1 8 DG 8 8 8 DG DG D . n D 1 9 DC 9 9 9 DC DC D . n D 1 10 DT 10 10 10 DT DT D . n D 1 11 DG 11 11 11 DG DG D . n D 1 12 DA 12 12 12 DA DA D . n D 1 13 DA 13 13 13 DA DA D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CO 1 101 2 CO CO A . F 2 CO 1 102 4 CO CO A . G 3 F1R 1 103 2 F1R TAZ A . H 2 CO 1 101 1 CO CO B . I 2 CO 1 102 3 CO CO B . J 3 F1R 1 103 3 F1R TAZ B . K 3 F1R 1 101 0 F1R TAZ C . L 3 F1R 1 101 1 F1R TAZ D . M 4 HOH 1 201 73 HOH HOH A . M 4 HOH 2 202 37 HOH HOH A . M 4 HOH 3 203 47 HOH HOH A . M 4 HOH 4 204 95 HOH HOH A . M 4 HOH 5 205 100 HOH HOH A . M 4 HOH 6 206 56 HOH HOH A . M 4 HOH 7 207 66 HOH HOH A . M 4 HOH 8 208 184 HOH HOH A . M 4 HOH 9 209 57 HOH HOH A . M 4 HOH 10 210 30 HOH HOH A . M 4 HOH 11 211 123 HOH HOH A . M 4 HOH 12 212 67 HOH HOH A . M 4 HOH 13 213 97 HOH HOH A . M 4 HOH 14 214 131 HOH HOH A . M 4 HOH 15 215 72 HOH HOH A . M 4 HOH 16 216 78 HOH HOH A . M 4 HOH 17 217 38 HOH HOH A . M 4 HOH 18 218 12 HOH HOH A . M 4 HOH 19 219 75 HOH HOH A . M 4 HOH 20 220 204 HOH HOH A . M 4 HOH 21 221 161 HOH HOH A . M 4 HOH 22 222 15 HOH HOH A . M 4 HOH 23 223 154 HOH HOH A . M 4 HOH 24 224 191 HOH HOH A . M 4 HOH 25 225 1 HOH HOH A . M 4 HOH 26 226 31 HOH HOH A . M 4 HOH 27 227 36 HOH HOH A . M 4 HOH 28 228 80 HOH HOH A . M 4 HOH 29 229 86 HOH HOH A . M 4 HOH 30 230 172 HOH HOH A . M 4 HOH 31 231 148 HOH HOH A . M 4 HOH 32 232 10 HOH HOH A . M 4 HOH 33 233 94 HOH HOH A . M 4 HOH 34 234 130 HOH HOH A . M 4 HOH 35 235 147 HOH HOH A . M 4 HOH 36 236 20 HOH HOH A . M 4 HOH 37 237 113 HOH HOH A . M 4 HOH 38 238 140 HOH HOH A . M 4 HOH 39 239 61 HOH HOH A . M 4 HOH 40 240 82 HOH HOH A . M 4 HOH 41 241 176 HOH HOH A . M 4 HOH 42 242 126 HOH HOH A . M 4 HOH 43 243 201 HOH HOH A . M 4 HOH 44 244 192 HOH HOH A . M 4 HOH 45 245 110 HOH HOH A . M 4 HOH 46 246 168 HOH HOH A . M 4 HOH 47 247 112 HOH HOH A . M 4 HOH 48 248 134 HOH HOH A . M 4 HOH 49 249 164 HOH HOH A . M 4 HOH 50 250 207 HOH HOH A . M 4 HOH 51 251 41 HOH HOH A . M 4 HOH 52 252 159 HOH HOH A . N 4 HOH 1 201 3 HOH HOH B . N 4 HOH 2 202 151 HOH HOH B . N 4 HOH 3 203 196 HOH HOH B . N 4 HOH 4 204 16 HOH HOH B . N 4 HOH 5 205 135 HOH HOH B . N 4 HOH 6 206 118 HOH HOH B . N 4 HOH 7 207 26 HOH HOH B . N 4 HOH 8 208 55 HOH HOH B . N 4 HOH 9 209 90 HOH HOH B . N 4 HOH 10 210 169 HOH HOH B . N 4 HOH 11 211 144 HOH HOH B . N 4 HOH 12 212 45 HOH HOH B . N 4 HOH 13 213 83 HOH HOH B . N 4 HOH 14 214 77 HOH HOH B . N 4 HOH 15 215 32 HOH HOH B . N 4 HOH 16 216 150 HOH HOH B . N 4 HOH 17 217 183 HOH HOH B . N 4 HOH 18 218 53 HOH HOH B . N 4 HOH 19 219 18 HOH HOH B . N 4 HOH 20 220 51 HOH HOH B . N 4 HOH 21 221 106 HOH HOH B . N 4 HOH 22 222 162 HOH HOH B . N 4 HOH 23 223 40 HOH HOH B . N 4 HOH 24 224 71 HOH HOH B . N 4 HOH 25 225 114 HOH HOH B . N 4 HOH 26 226 104 HOH HOH B . N 4 HOH 27 227 65 HOH HOH B . N 4 HOH 28 228 89 HOH HOH B . N 4 HOH 29 229 34 HOH HOH B . N 4 HOH 30 230 125 HOH HOH B . N 4 HOH 31 231 59 HOH HOH B . N 4 HOH 32 232 6 HOH HOH B . N 4 HOH 33 233 81 HOH HOH B . N 4 HOH 34 234 156 HOH HOH B . N 4 HOH 35 235 24 HOH HOH B . N 4 HOH 36 236 50 HOH HOH B . N 4 HOH 37 237 7 HOH HOH B . N 4 HOH 38 238 102 HOH HOH B . N 4 HOH 39 239 181 HOH HOH B . N 4 HOH 40 240 180 HOH HOH B . N 4 HOH 41 241 98 HOH HOH B . N 4 HOH 42 242 108 HOH HOH B . N 4 HOH 43 243 205 HOH HOH B . N 4 HOH 44 244 142 HOH HOH B . N 4 HOH 45 245 138 HOH HOH B . N 4 HOH 46 246 129 HOH HOH B . N 4 HOH 47 247 197 HOH HOH B . N 4 HOH 48 248 21 HOH HOH B . N 4 HOH 49 249 188 HOH HOH B . N 4 HOH 50 250 171 HOH HOH B . N 4 HOH 51 251 92 HOH HOH B . N 4 HOH 52 252 175 HOH HOH B . N 4 HOH 53 253 27 HOH HOH B . O 4 HOH 1 201 103 HOH HOH C . O 4 HOH 2 202 8 HOH HOH C . O 4 HOH 3 203 105 HOH HOH C . O 4 HOH 4 204 93 HOH HOH C . O 4 HOH 5 205 206 HOH HOH C . O 4 HOH 6 206 33 HOH HOH C . O 4 HOH 7 207 115 HOH HOH C . O 4 HOH 8 208 9 HOH HOH C . O 4 HOH 9 209 60 HOH HOH C . O 4 HOH 10 210 22 HOH HOH C . O 4 HOH 11 211 143 HOH HOH C . O 4 HOH 12 212 5 HOH HOH C . O 4 HOH 13 213 70 HOH HOH C . O 4 HOH 14 214 107 HOH HOH C . O 4 HOH 15 215 179 HOH HOH C . O 4 HOH 16 216 119 HOH HOH C . O 4 HOH 17 217 54 HOH HOH C . O 4 HOH 18 218 193 HOH HOH C . O 4 HOH 19 219 124 HOH HOH C . O 4 HOH 20 220 25 HOH HOH C . O 4 HOH 21 221 17 HOH HOH C . O 4 HOH 22 222 63 HOH HOH C . O 4 HOH 23 223 157 HOH HOH C . O 4 HOH 24 224 52 HOH HOH C . O 4 HOH 25 225 35 HOH HOH C . O 4 HOH 26 226 141 HOH HOH C . O 4 HOH 27 227 165 HOH HOH C . O 4 HOH 28 228 2 HOH HOH C . O 4 HOH 29 229 88 HOH HOH C . O 4 HOH 30 230 145 HOH HOH C . O 4 HOH 31 231 186 HOH HOH C . O 4 HOH 32 232 136 HOH HOH C . O 4 HOH 33 233 194 HOH HOH C . O 4 HOH 34 234 182 HOH HOH C . O 4 HOH 35 235 23 HOH HOH C . O 4 HOH 36 236 44 HOH HOH C . O 4 HOH 37 237 87 HOH HOH C . O 4 HOH 38 238 49 HOH HOH C . O 4 HOH 39 239 200 HOH HOH C . O 4 HOH 40 240 109 HOH HOH C . O 4 HOH 41 241 163 HOH HOH C . O 4 HOH 42 242 152 HOH HOH C . O 4 HOH 43 243 203 HOH HOH C . O 4 HOH 44 244 84 HOH HOH C . O 4 HOH 45 245 48 HOH HOH C . O 4 HOH 46 246 187 HOH HOH C . O 4 HOH 47 247 170 HOH HOH C . O 4 HOH 48 248 128 HOH HOH C . O 4 HOH 49 249 99 HOH HOH C . O 4 HOH 50 250 91 HOH HOH C . O 4 HOH 51 251 28 HOH HOH C . O 4 HOH 52 252 174 HOH HOH C . O 4 HOH 53 253 178 HOH HOH C . O 4 HOH 54 254 137 HOH HOH C . O 4 HOH 55 255 173 HOH HOH C . O 4 HOH 56 256 155 HOH HOH C . O 4 HOH 57 257 177 HOH HOH C . O 4 HOH 58 258 195 HOH HOH C . P 4 HOH 1 201 85 HOH HOH D . P 4 HOH 2 202 4 HOH HOH D . P 4 HOH 3 203 116 HOH HOH D . P 4 HOH 4 204 46 HOH HOH D . P 4 HOH 5 205 160 HOH HOH D . P 4 HOH 6 206 198 HOH HOH D . P 4 HOH 7 207 146 HOH HOH D . P 4 HOH 8 208 199 HOH HOH D . P 4 HOH 9 209 76 HOH HOH D . P 4 HOH 10 210 79 HOH HOH D . P 4 HOH 11 211 117 HOH HOH D . P 4 HOH 12 212 185 HOH HOH D . P 4 HOH 13 213 132 HOH HOH D . P 4 HOH 14 214 120 HOH HOH D . P 4 HOH 15 215 74 HOH HOH D . P 4 HOH 16 216 139 HOH HOH D . P 4 HOH 17 217 149 HOH HOH D . P 4 HOH 18 218 69 HOH HOH D . P 4 HOH 19 219 13 HOH HOH D . P 4 HOH 20 220 122 HOH HOH D . P 4 HOH 21 221 153 HOH HOH D . P 4 HOH 22 222 29 HOH HOH D . P 4 HOH 23 223 64 HOH HOH D . P 4 HOH 24 224 14 HOH HOH D . P 4 HOH 25 225 68 HOH HOH D . P 4 HOH 26 226 101 HOH HOH D . P 4 HOH 27 227 11 HOH HOH D . P 4 HOH 28 228 19 HOH HOH D . P 4 HOH 29 229 96 HOH HOH D . P 4 HOH 30 230 62 HOH HOH D . P 4 HOH 31 231 121 HOH HOH D . P 4 HOH 32 232 190 HOH HOH D . P 4 HOH 33 233 166 HOH HOH D . P 4 HOH 34 234 39 HOH HOH D . P 4 HOH 35 235 202 HOH HOH D . P 4 HOH 36 236 127 HOH HOH D . P 4 HOH 37 237 167 HOH HOH D . P 4 HOH 38 238 133 HOH HOH D . P 4 HOH 39 239 111 HOH HOH D . P 4 HOH 40 240 58 HOH HOH D . P 4 HOH 41 241 189 HOH HOH D . P 4 HOH 42 242 43 HOH HOH D . P 4 HOH 43 243 42 HOH HOH D . P 4 HOH 44 244 158 HOH HOH D . # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id DT _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 4 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id "O4'" _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id A _pdbx_unobs_or_zero_occ_atoms.label_comp_id DT _pdbx_unobs_or_zero_occ_atoms.label_seq_id 4 _pdbx_unobs_or_zero_occ_atoms.label_atom_id "O4'" # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.10.1_2155 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXCD ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 121.290 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6M4T _cell.details ? _cell.formula_units_Z ? _cell.length_a 57.204 _cell.length_a_esd ? _cell.length_b 62.631 _cell.length_b_esd ? _cell.length_c 29.743 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6M4T _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6M4T _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.89 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 57.39 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'MES (pH=6.5) 50mM, MPD 35 %, Potassium chloride 200mM, CoCl2 20mM' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX300HE' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-06-01 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91932 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'NSRRC BEAMLINE TPS 05A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.91932 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 'TPS 05A' _diffrn_source.pdbx_synchrotron_site NSRRC # _reflns.B_iso_Wilson_estimate 19.390 _reflns.entry_id 6M4T _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.543 _reflns.d_resolution_low 30.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 13080 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.200 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.700 _reflns.pdbx_Rmerge_I_obs 0.042 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.100 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.029 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.050 _reflns.pdbx_Rpim_I_all 0.026 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 1.550 1.610 ? ? ? ? ? ? 1250 95.300 ? ? ? ? 0.604 ? ? ? ? ? ? ? ? 3.400 ? 1.095 ? ? 0.714 0.377 ? 1 1 0.820 ? ? 1.610 1.670 ? ? ? ? ? ? 1304 99.200 ? ? ? ? 0.392 ? ? ? ? ? ? ? ? 3.600 ? 1.089 ? ? 0.462 0.241 ? 2 1 0.917 ? ? 1.670 1.750 ? ? ? ? ? ? 1302 100.000 ? ? ? ? 0.271 ? ? ? ? ? ? ? ? 3.700 ? 1.080 ? ? 0.317 0.164 ? 3 1 0.954 ? ? 1.750 1.840 ? ? ? ? ? ? 1317 100.000 ? ? ? ? 0.198 ? ? ? ? ? ? ? ? 3.700 ? 1.035 ? ? 0.232 0.119 ? 4 1 0.974 ? ? 1.840 1.950 ? ? ? ? ? ? 1309 100.000 ? ? ? ? 0.135 ? ? ? ? ? ? ? ? 3.700 ? 0.945 ? ? 0.158 0.081 ? 5 1 0.988 ? ? 1.950 2.100 ? ? ? ? ? ? 1317 100.000 ? ? ? ? 0.095 ? ? ? ? ? ? ? ? 3.700 ? 0.983 ? ? 0.111 0.057 ? 6 1 0.993 ? ? 2.100 2.320 ? ? ? ? ? ? 1318 100.000 ? ? ? ? 0.073 ? ? ? ? ? ? ? ? 3.800 ? 1.062 ? ? 0.085 0.044 ? 7 1 0.995 ? ? 2.320 2.650 ? ? ? ? ? ? 1325 100.000 ? ? ? ? 0.045 ? ? ? ? ? ? ? ? 3.800 ? 0.997 ? ? 0.053 0.027 ? 8 1 0.998 ? ? 2.650 3.340 ? ? ? ? ? ? 1317 99.500 ? ? ? ? 0.030 ? ? ? ? ? ? ? ? 3.800 ? 1.025 ? ? 0.035 0.018 ? 9 1 0.999 ? ? 3.340 30.000 ? ? ? ? ? ? 1321 98.400 ? ? ? ? 0.025 ? ? ? ? ? ? ? ? 3.600 ? 0.992 ? ? 0.029 0.015 ? 10 1 0.999 ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 97.890 _refine.B_iso_mean 29.6110 _refine.B_iso_min 9.970 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6M4T _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.55 _refine.ls_d_res_low 19.7340 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 13071 _refine.ls_number_reflns_R_free 1303 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 50 _refine.ls_percent_reflns_R_free 9.9700 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1675 _refine.ls_R_factor_R_free 0.1900 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1650 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 23.6000 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1600 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.55 _refine_hist.d_res_low 19.7340 _refine_hist.number_atoms_solvent 207 _refine_hist.number_atoms_total 1394 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 52 _refine_hist.pdbx_B_iso_mean_ligand 24.96 _refine_hist.pdbx_B_iso_mean_solvent 28.05 _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1059 _refine_hist.pdbx_number_atoms_ligand 128 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.009 ? 1314 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.251 ? 1995 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.048 ? 190 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 ? 60 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 32.418 ? 592 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.55 1.6050 . . 133 1207 46.0000 . . . 0.2690 0.0000 0.2502 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6050 1.6780 . . 148 1296 49.0000 . . . 0.2629 0.0000 0.1972 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6780 1.7664 . . 147 1355 51.0000 . . . 0.2213 0.0000 0.1785 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7664 1.8770 . . 144 1306 50.0000 . . . 0.1965 0.0000 0.1616 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8770 2.0218 . . 146 1312 50.0000 . . . 0.2115 0.0000 0.1701 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0218 2.2250 . . 148 1334 51.0000 . . . 0.1930 0.0000 0.1694 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2250 2.5464 . . 142 1299 49.0000 . . . 0.2212 0.0000 0.1753 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5464 3.2060 . . 149 1325 50.0000 . . . 0.2141 0.0000 0.1754 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2060 19.7340 . . 146 1334 50.0000 . . . 0.1449 0.0000 0.1433 . . . . . . . . . . . # _struct.entry_id 6M4T _struct.title 'U shaped head to head four-way junction in d(TTCTGCTGCTGAA) sequence' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6M4T _struct_keywords.text 'T:T mismatch, CTG repeat, four-way junction, triaminotriazine-acridine conjugate, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 2 ? I N N 2 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 4 ? N N N 4 ? O N N 4 ? P N N 4 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6M4T _struct_ref.pdbx_db_accession 6M4T _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6M4T A 1 ? 13 ? 6M4T 1 ? 13 ? 1 13 2 1 6M4T B 1 ? 13 ? 6M4T 1 ? 13 ? 1 13 3 1 6M4T C 1 ? 13 ? 6M4T 1 ? 13 ? 1 13 4 1 6M4T D 1 ? 13 ? 6M4T 1 ? 13 ? 1 13 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7170 ? 1 MORE -56 ? 1 'SSA (A^2)' 8690 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A BRU 1 "O3'" ? ? ? 1_555 A DT 2 P ? ? A BRU 1 A DT 2 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale2 covale both ? B BRU 1 "O3'" ? ? ? 1_555 B DT 2 P ? ? B BRU 1 B DT 2 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale3 covale both ? C BRU 1 "O3'" ? ? ? 1_555 C DT 2 P ? ? C BRU 1 C DT 2 1_555 ? ? ? ? ? ? ? 1.611 ? ? covale4 covale both ? D BRU 1 "O3'" ? ? ? 1_555 D DT 2 P ? ? D BRU 1 D DT 2 1_555 ? ? ? ? ? ? ? 1.608 ? ? metalc1 metalc ? ? A DG 5 N7 ? ? ? 1_555 E CO . CO ? ? A DG 5 A CO 101 1_555 ? ? ? ? ? ? ? 2.187 ? ? metalc2 metalc ? ? A DG 8 N7 ? ? ? 1_555 F CO . CO ? ? A DG 8 A CO 102 1_555 ? ? ? ? ? ? ? 2.280 ? ? metalc3 metalc ? ? E CO . CO ? ? ? 1_555 M HOH . O ? ? A CO 101 A HOH 201 1_555 ? ? ? ? ? ? ? 2.136 ? ? metalc4 metalc ? ? E CO . CO ? ? ? 1_555 M HOH . O ? ? A CO 101 A HOH 215 1_555 ? ? ? ? ? ? ? 2.024 ? ? metalc5 metalc ? ? E CO . CO ? ? ? 1_555 D DG 8 N7 ? ? A CO 101 D DG 8 1_555 ? ? ? ? ? ? ? 2.118 ? ? metalc6 metalc ? ? E CO . CO ? ? ? 1_555 P HOH . O ? ? A CO 101 D HOH 208 1_555 ? ? ? ? ? ? ? 1.999 ? ? metalc7 metalc ? ? E CO . CO ? ? ? 1_555 P HOH . O ? ? A CO 101 D HOH 211 1_555 ? ? ? ? ? ? ? 1.872 ? ? metalc8 metalc ? ? F CO . CO ? ? ? 1_555 M HOH . O ? ? A CO 102 A HOH 225 1_555 ? ? ? ? ? ? ? 1.965 ? ? metalc9 metalc ? ? F CO . CO ? ? ? 1_555 N HOH . O ? ? A CO 102 B HOH 224 1_555 ? ? ? ? ? ? ? 2.267 ? ? metalc10 metalc ? ? F CO . CO ? ? ? 1_555 D DG 5 N7 ? ? A CO 102 D DG 5 1_555 ? ? ? ? ? ? ? 2.201 ? ? metalc11 metalc ? ? F CO . CO ? ? ? 1_555 P HOH . O ? ? A CO 102 D HOH 203 1_555 ? ? ? ? ? ? ? 2.054 ? ? metalc12 metalc ? ? F CO . CO ? ? ? 1_555 P HOH . O ? ? A CO 102 D HOH 215 1_555 ? ? ? ? ? ? ? 1.966 ? ? metalc13 metalc ? ? B DG 5 N7 ? ? ? 1_555 H CO . CO ? ? B DG 5 B CO 101 1_555 ? ? ? ? ? ? ? 2.162 ? ? metalc14 metalc ? ? B DG 8 N7 ? ? ? 1_555 I CO . CO ? ? B DG 8 B CO 102 1_555 ? ? ? ? ? ? ? 2.185 ? ? metalc15 metalc ? ? H CO . CO ? ? ? 1_555 N HOH . O ? ? B CO 101 B HOH 201 1_555 ? ? ? ? ? ? ? 2.217 ? ? metalc16 metalc ? ? H CO . CO ? ? ? 1_555 N HOH . O ? ? B CO 101 B HOH 225 1_555 ? ? ? ? ? ? ? 1.842 ? ? metalc17 metalc ? ? H CO . CO ? ? ? 1_555 C DG 8 N7 ? ? B CO 101 C DG 8 1_555 ? ? ? ? ? ? ? 2.174 ? ? metalc18 metalc ? ? H CO . CO ? ? ? 1_555 O HOH . O ? ? B CO 101 C HOH 216 1_555 ? ? ? ? ? ? ? 2.075 ? ? metalc19 metalc ? ? H CO . CO ? ? ? 1_555 P HOH . O ? ? B CO 101 D HOH 218 1_555 ? ? ? ? ? ? ? 2.345 ? ? metalc20 metalc ? ? I CO . CO ? ? ? 1_555 N HOH . O ? ? B CO 102 B HOH 206 1_555 ? ? ? ? ? ? ? 1.965 ? ? metalc21 metalc ? ? I CO . CO ? ? ? 1_555 C DG 5 N7 ? ? B CO 102 C DG 5 1_555 ? ? ? ? ? ? ? 2.224 ? ? metalc22 metalc ? ? I CO . CO ? ? ? 1_555 O HOH . O ? ? B CO 102 C HOH 207 1_555 ? ? ? ? ? ? ? 2.194 ? ? metalc23 metalc ? ? I CO . CO ? ? ? 1_555 O HOH . O ? ? B CO 102 C HOH 213 1_555 ? ? ? ? ? ? ? 2.008 ? ? metalc24 metalc ? ? I CO . CO ? ? ? 1_555 O HOH . O ? ? B CO 102 C HOH 228 1_555 ? ? ? ? ? ? ? 2.235 ? ? hydrog1 hydrog ? ? A BRU 1 N3 ? ? ? 1_555 C DA 13 N1 ? ? A BRU 1 C DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A BRU 1 O4 ? ? ? 1_555 C DA 13 N6 ? ? A BRU 1 C DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DT 2 N3 ? ? ? 1_555 C DA 12 N1 ? ? A DT 2 C DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 2 O4 ? ? ? 1_555 C DA 12 N6 ? ? A DT 2 C DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 3 N3 ? ? ? 1_555 C DG 11 N1 ? ? A DC 3 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 3 N4 ? ? ? 1_555 C DG 11 O6 ? ? A DC 3 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 O2 ? ? ? 1_555 C DG 11 N2 ? ? A DC 3 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 6 N3 ? ? A DG 5 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 6 O2 ? ? A DG 5 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 6 N4 ? ? A DG 5 B DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 5 N2 ? ? ? 1_555 D DC 6 O2 ? ? A DG 5 D DC 6 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog12 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 5 N1 ? ? A DC 6 B DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 5 O6 ? ? A DC 6 B DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 5 N2 ? ? A DC 6 B DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 O2 ? ? ? 1_555 D DG 5 N2 ? ? A DC 6 D DG 5 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog16 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B DC 9 N3 ? ? A DG 8 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 9 O2 ? ? A DG 8 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B DC 9 N4 ? ? A DG 8 B DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 8 N1 ? ? A DC 9 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 8 O6 ? ? A DC 9 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 8 N2 ? ? A DC 9 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 11 N1 ? ? ? 1_555 C DC 3 N3 ? ? A DG 11 C DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 11 N2 ? ? ? 1_555 C DC 3 O2 ? ? A DG 11 C DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 11 O6 ? ? ? 1_555 C DC 3 N4 ? ? A DG 11 C DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 12 N1 ? ? ? 1_555 C DT 2 N3 ? ? A DA 12 C DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DA 12 N6 ? ? ? 1_555 C DT 2 O4 ? ? A DA 12 C DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DA 13 N1 ? ? ? 1_555 C BRU 1 N3 ? ? A DA 13 C BRU 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DA 13 N6 ? ? ? 1_555 C BRU 1 O4 ? ? A DA 13 C BRU 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B BRU 1 N3 ? ? ? 1_555 D DA 13 N1 ? ? B BRU 1 D DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B BRU 1 O4 ? ? ? 1_555 D DA 13 N6 ? ? B BRU 1 D DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DT 2 N3 ? ? ? 1_555 D DA 12 N1 ? ? B DT 2 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DT 2 O4 ? ? ? 1_555 D DA 12 N6 ? ? B DT 2 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DC 3 N3 ? ? ? 1_555 D DG 11 N1 ? ? B DC 3 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DC 3 N4 ? ? ? 1_555 D DG 11 O6 ? ? B DC 3 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DC 3 O2 ? ? ? 1_555 D DG 11 N2 ? ? B DC 3 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DG 5 N2 ? ? ? 1_555 C DC 6 O2 ? ? B DG 5 C DC 6 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog37 hydrog ? ? B DC 6 O2 ? ? ? 1_555 C DG 5 N2 ? ? B DC 6 C DG 5 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog38 hydrog ? ? B DG 11 N1 ? ? ? 1_555 D DC 3 N3 ? ? B DG 11 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B DG 11 N2 ? ? ? 1_555 D DC 3 O2 ? ? B DG 11 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B DG 11 O6 ? ? ? 1_555 D DC 3 N4 ? ? B DG 11 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B DA 12 N1 ? ? ? 1_555 D DT 2 N3 ? ? B DA 12 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B DA 12 N6 ? ? ? 1_555 D DT 2 O4 ? ? B DA 12 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B DA 13 N1 ? ? ? 1_555 D BRU 1 N3 ? ? B DA 13 D BRU 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B DA 13 N6 ? ? ? 1_555 D BRU 1 O4 ? ? B DA 13 D BRU 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C DG 5 N1 ? ? ? 1_555 D DC 6 N3 ? ? C DG 5 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C DG 5 N2 ? ? ? 1_555 D DC 6 O2 ? ? C DG 5 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C DG 5 O6 ? ? ? 1_555 D DC 6 N4 ? ? C DG 5 D DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C DC 6 N3 ? ? ? 1_555 D DG 5 N1 ? ? C DC 6 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C DC 6 N4 ? ? ? 1_555 D DG 5 O6 ? ? C DC 6 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? C DC 6 O2 ? ? ? 1_555 D DG 5 N2 ? ? C DC 6 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? C DG 8 N1 ? ? ? 1_555 D DC 9 N3 ? ? C DG 8 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? C DG 8 N2 ? ? ? 1_555 D DC 9 O2 ? ? C DG 8 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? C DG 8 O6 ? ? ? 1_555 D DC 9 N4 ? ? C DG 8 D DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? C DC 9 N3 ? ? ? 1_555 D DG 8 N1 ? ? C DC 9 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? C DC 9 N4 ? ? ? 1_555 D DG 8 O6 ? ? C DC 9 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? C DC 9 O2 ? ? ? 1_555 D DG 8 N2 ? ? C DC 9 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N7 ? A DG 5 ? A DG 5 ? 1_555 CO ? E CO . ? A CO 101 ? 1_555 O ? M HOH . ? A HOH 201 ? 1_555 90.9 ? 2 N7 ? A DG 5 ? A DG 5 ? 1_555 CO ? E CO . ? A CO 101 ? 1_555 O ? M HOH . ? A HOH 215 ? 1_555 92.6 ? 3 O ? M HOH . ? A HOH 201 ? 1_555 CO ? E CO . ? A CO 101 ? 1_555 O ? M HOH . ? A HOH 215 ? 1_555 174.5 ? 4 N7 ? A DG 5 ? A DG 5 ? 1_555 CO ? E CO . ? A CO 101 ? 1_555 N7 ? D DG 8 ? D DG 8 ? 1_555 164.4 ? 5 O ? M HOH . ? A HOH 201 ? 1_555 CO ? E CO . ? A CO 101 ? 1_555 N7 ? D DG 8 ? D DG 8 ? 1_555 90.8 ? 6 O ? M HOH . ? A HOH 215 ? 1_555 CO ? E CO . ? A CO 101 ? 1_555 N7 ? D DG 8 ? D DG 8 ? 1_555 84.6 ? 7 N7 ? A DG 5 ? A DG 5 ? 1_555 CO ? E CO . ? A CO 101 ? 1_555 O ? P HOH . ? D HOH 208 ? 1_555 93.8 ? 8 O ? M HOH . ? A HOH 201 ? 1_555 CO ? E CO . ? A CO 101 ? 1_555 O ? P HOH . ? D HOH 208 ? 1_555 75.0 ? 9 O ? M HOH . ? A HOH 215 ? 1_555 CO ? E CO . ? A CO 101 ? 1_555 O ? P HOH . ? D HOH 208 ? 1_555 108.9 ? 10 N7 ? D DG 8 ? D DG 8 ? 1_555 CO ? E CO . ? A CO 101 ? 1_555 O ? P HOH . ? D HOH 208 ? 1_555 101.6 ? 11 N7 ? A DG 5 ? A DG 5 ? 1_555 CO ? E CO . ? A CO 101 ? 1_555 O ? P HOH . ? D HOH 211 ? 1_555 82.3 ? 12 O ? M HOH . ? A HOH 201 ? 1_555 CO ? E CO . ? A CO 101 ? 1_555 O ? P HOH . ? D HOH 211 ? 1_555 106.2 ? 13 O ? M HOH . ? A HOH 215 ? 1_555 CO ? E CO . ? A CO 101 ? 1_555 O ? P HOH . ? D HOH 211 ? 1_555 70.2 ? 14 N7 ? D DG 8 ? D DG 8 ? 1_555 CO ? E CO . ? A CO 101 ? 1_555 O ? P HOH . ? D HOH 211 ? 1_555 82.3 ? 15 O ? P HOH . ? D HOH 208 ? 1_555 CO ? E CO . ? A CO 101 ? 1_555 O ? P HOH . ? D HOH 211 ? 1_555 175.9 ? 16 N7 ? A DG 8 ? A DG 8 ? 1_555 CO ? F CO . ? A CO 102 ? 1_555 O ? M HOH . ? A HOH 225 ? 1_555 87.4 ? 17 N7 ? A DG 8 ? A DG 8 ? 1_555 CO ? F CO . ? A CO 102 ? 1_555 O ? N HOH . ? B HOH 224 ? 1_555 94.3 ? 18 O ? M HOH . ? A HOH 225 ? 1_555 CO ? F CO . ? A CO 102 ? 1_555 O ? N HOH . ? B HOH 224 ? 1_555 70.1 ? 19 N7 ? A DG 8 ? A DG 8 ? 1_555 CO ? F CO . ? A CO 102 ? 1_555 N7 ? D DG 5 ? D DG 5 ? 1_555 178.9 ? 20 O ? M HOH . ? A HOH 225 ? 1_555 CO ? F CO . ? A CO 102 ? 1_555 N7 ? D DG 5 ? D DG 5 ? 1_555 91.6 ? 21 O ? N HOH . ? B HOH 224 ? 1_555 CO ? F CO . ? A CO 102 ? 1_555 N7 ? D DG 5 ? D DG 5 ? 1_555 85.3 ? 22 N7 ? A DG 8 ? A DG 8 ? 1_555 CO ? F CO . ? A CO 102 ? 1_555 O ? P HOH . ? D HOH 203 ? 1_555 89.4 ? 23 O ? M HOH . ? A HOH 225 ? 1_555 CO ? F CO . ? A CO 102 ? 1_555 O ? P HOH . ? D HOH 203 ? 1_555 167.4 ? 24 O ? N HOH . ? B HOH 224 ? 1_555 CO ? F CO . ? A CO 102 ? 1_555 O ? P HOH . ? D HOH 203 ? 1_555 98.1 ? 25 N7 ? D DG 5 ? D DG 5 ? 1_555 CO ? F CO . ? A CO 102 ? 1_555 O ? P HOH . ? D HOH 203 ? 1_555 91.6 ? 26 N7 ? A DG 8 ? A DG 8 ? 1_555 CO ? F CO . ? A CO 102 ? 1_555 O ? P HOH . ? D HOH 215 ? 1_555 87.6 ? 27 O ? M HOH . ? A HOH 225 ? 1_555 CO ? F CO . ? A CO 102 ? 1_555 O ? P HOH . ? D HOH 215 ? 1_555 94.9 ? 28 O ? N HOH . ? B HOH 224 ? 1_555 CO ? F CO . ? A CO 102 ? 1_555 O ? P HOH . ? D HOH 215 ? 1_555 164.7 ? 29 N7 ? D DG 5 ? D DG 5 ? 1_555 CO ? F CO . ? A CO 102 ? 1_555 O ? P HOH . ? D HOH 215 ? 1_555 92.5 ? 30 O ? P HOH . ? D HOH 203 ? 1_555 CO ? F CO . ? A CO 102 ? 1_555 O ? P HOH . ? D HOH 215 ? 1_555 97.1 ? 31 N7 ? B DG 5 ? B DG 5 ? 1_555 CO ? H CO . ? B CO 101 ? 1_555 O ? N HOH . ? B HOH 201 ? 1_555 86.1 ? 32 N7 ? B DG 5 ? B DG 5 ? 1_555 CO ? H CO . ? B CO 101 ? 1_555 O ? N HOH . ? B HOH 225 ? 1_555 91.0 ? 33 O ? N HOH . ? B HOH 201 ? 1_555 CO ? H CO . ? B CO 101 ? 1_555 O ? N HOH . ? B HOH 225 ? 1_555 124.8 ? 34 N7 ? B DG 5 ? B DG 5 ? 1_555 CO ? H CO . ? B CO 101 ? 1_555 N7 ? C DG 8 ? C DG 8 ? 1_555 176.0 ? 35 O ? N HOH . ? B HOH 201 ? 1_555 CO ? H CO . ? B CO 101 ? 1_555 N7 ? C DG 8 ? C DG 8 ? 1_555 91.6 ? 36 O ? N HOH . ? B HOH 225 ? 1_555 CO ? H CO . ? B CO 101 ? 1_555 N7 ? C DG 8 ? C DG 8 ? 1_555 93.0 ? 37 N7 ? B DG 5 ? B DG 5 ? 1_555 CO ? H CO . ? B CO 101 ? 1_555 O ? O HOH . ? C HOH 216 ? 1_555 92.3 ? 38 O ? N HOH . ? B HOH 201 ? 1_555 CO ? H CO . ? B CO 101 ? 1_555 O ? O HOH . ? C HOH 216 ? 1_555 58.0 ? 39 O ? N HOH . ? B HOH 225 ? 1_555 CO ? H CO . ? B CO 101 ? 1_555 O ? O HOH . ? C HOH 216 ? 1_555 175.9 ? 40 N7 ? C DG 8 ? C DG 8 ? 1_555 CO ? H CO . ? B CO 101 ? 1_555 O ? O HOH . ? C HOH 216 ? 1_555 83.8 ? 41 N7 ? B DG 5 ? B DG 5 ? 1_555 CO ? H CO . ? B CO 101 ? 1_555 O ? P HOH . ? D HOH 218 ? 1_555 89.0 ? 42 O ? N HOH . ? B HOH 201 ? 1_555 CO ? H CO . ? B CO 101 ? 1_555 O ? P HOH . ? D HOH 218 ? 1_555 134.8 ? 43 O ? N HOH . ? B HOH 225 ? 1_555 CO ? H CO . ? B CO 101 ? 1_555 O ? P HOH . ? D HOH 218 ? 1_555 100.2 ? 44 N7 ? C DG 8 ? C DG 8 ? 1_555 CO ? H CO . ? B CO 101 ? 1_555 O ? P HOH . ? D HOH 218 ? 1_555 90.3 ? 45 O ? O HOH . ? C HOH 216 ? 1_555 CO ? H CO . ? B CO 101 ? 1_555 O ? P HOH . ? D HOH 218 ? 1_555 77.4 ? 46 N7 ? B DG 8 ? B DG 8 ? 1_555 CO ? I CO . ? B CO 102 ? 1_555 O ? N HOH . ? B HOH 206 ? 1_555 100.3 ? 47 N7 ? B DG 8 ? B DG 8 ? 1_555 CO ? I CO . ? B CO 102 ? 1_555 N7 ? C DG 5 ? C DG 5 ? 1_555 168.4 ? 48 O ? N HOH . ? B HOH 206 ? 1_555 CO ? I CO . ? B CO 102 ? 1_555 N7 ? C DG 5 ? C DG 5 ? 1_555 90.6 ? 49 N7 ? B DG 8 ? B DG 8 ? 1_555 CO ? I CO . ? B CO 102 ? 1_555 O ? O HOH . ? C HOH 207 ? 1_555 82.8 ? 50 O ? N HOH . ? B HOH 206 ? 1_555 CO ? I CO . ? B CO 102 ? 1_555 O ? O HOH . ? C HOH 207 ? 1_555 175.3 ? 51 N7 ? C DG 5 ? C DG 5 ? 1_555 CO ? I CO . ? B CO 102 ? 1_555 O ? O HOH . ? C HOH 207 ? 1_555 86.6 ? 52 N7 ? B DG 8 ? B DG 8 ? 1_555 CO ? I CO . ? B CO 102 ? 1_555 O ? O HOH . ? C HOH 213 ? 1_555 88.8 ? 53 O ? N HOH . ? B HOH 206 ? 1_555 CO ? I CO . ? B CO 102 ? 1_555 O ? O HOH . ? C HOH 213 ? 1_555 103.6 ? 54 N7 ? C DG 5 ? C DG 5 ? 1_555 CO ? I CO . ? B CO 102 ? 1_555 O ? O HOH . ? C HOH 213 ? 1_555 92.3 ? 55 O ? O HOH . ? C HOH 207 ? 1_555 CO ? I CO . ? B CO 102 ? 1_555 O ? O HOH . ? C HOH 213 ? 1_555 72.7 ? 56 N7 ? B DG 8 ? B DG 8 ? 1_555 CO ? I CO . ? B CO 102 ? 1_555 O ? O HOH . ? C HOH 228 ? 1_555 80.0 ? 57 O ? N HOH . ? B HOH 206 ? 1_555 CO ? I CO . ? B CO 102 ? 1_555 O ? O HOH . ? C HOH 228 ? 1_555 106.6 ? 58 N7 ? C DG 5 ? C DG 5 ? 1_555 CO ? I CO . ? B CO 102 ? 1_555 O ? O HOH . ? C HOH 228 ? 1_555 93.4 ? 59 O ? O HOH . ? C HOH 207 ? 1_555 CO ? I CO . ? B CO 102 ? 1_555 O ? O HOH . ? C HOH 228 ? 1_555 77.4 ? 60 O ? O HOH . ? C HOH 213 ? 1_555 CO ? I CO . ? B CO 102 ? 1_555 O ? O HOH . ? C HOH 228 ? 1_555 149.2 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CO 101 ? 6 'binding site for residue CO A 101' AC2 Software A CO 102 ? 6 'binding site for residue CO A 102' AC3 Software A F1R 103 ? 12 'binding site for residue F1R A 103' AC4 Software B CO 101 ? 6 'binding site for residue CO B 101' AC5 Software B CO 102 ? 6 'binding site for residue CO B 102' AC6 Software B F1R 103 ? 12 'binding site for residue F1R B 103' AC7 Software C F1R 101 ? 8 'binding site for residue F1R C 101' AC8 Software D F1R 101 ? 9 'binding site for residue F1R D 101' AC9 Software B BRU 1 ? 6 'binding site for Di-nucleotide BRU B 1 and DT B 2' AD1 Software C BRU 1 ? 5 'binding site for Di-nucleotide BRU C 1 and DT C 2' AD2 Software D BRU 1 ? 6 'binding site for Di-nucleotide BRU D 1 and DT D 2' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 DG A 5 ? DG A 5 . ? 1_555 ? 2 AC1 6 HOH M . ? HOH A 201 . ? 1_555 ? 3 AC1 6 HOH M . ? HOH A 215 . ? 1_555 ? 4 AC1 6 DG D 8 ? DG D 8 . ? 1_555 ? 5 AC1 6 HOH P . ? HOH D 208 . ? 1_555 ? 6 AC1 6 HOH P . ? HOH D 211 . ? 1_555 ? 7 AC2 6 DG A 8 ? DG A 8 . ? 1_555 ? 8 AC2 6 HOH M . ? HOH A 225 . ? 1_555 ? 9 AC2 6 HOH N . ? HOH B 224 . ? 1_555 ? 10 AC2 6 DG D 5 ? DG D 5 . ? 1_555 ? 11 AC2 6 HOH P . ? HOH D 203 . ? 1_555 ? 12 AC2 6 HOH P . ? HOH D 215 . ? 1_555 ? 13 AC3 12 DT A 10 ? DT A 10 . ? 1_555 ? 14 AC3 12 DG A 11 ? DG A 11 . ? 1_555 ? 15 AC3 12 HOH M . ? HOH A 210 . ? 1_555 ? 16 AC3 12 HOH M . ? HOH A 226 . ? 1_555 ? 17 AC3 12 HOH M . ? HOH A 229 . ? 1_555 ? 18 AC3 12 HOH M . ? HOH A 232 . ? 1_555 ? 19 AC3 12 DG B 8 ? DG B 8 . ? 1_555 ? 20 AC3 12 DC C 3 ? DC C 3 . ? 1_555 ? 21 AC3 12 DT C 4 ? DT C 4 . ? 1_555 ? 22 AC3 12 DG C 5 ? DG C 5 . ? 1_555 ? 23 AC3 12 HOH O . ? HOH C 209 . ? 1_555 ? 24 AC3 12 HOH O . ? HOH C 213 . ? 1_555 ? 25 AC4 6 DG B 5 ? DG B 5 . ? 1_555 ? 26 AC4 6 HOH N . ? HOH B 201 . ? 1_555 ? 27 AC4 6 HOH N . ? HOH B 225 . ? 1_555 ? 28 AC4 6 DG C 8 ? DG C 8 . ? 1_555 ? 29 AC4 6 HOH O . ? HOH C 216 . ? 1_555 ? 30 AC4 6 HOH P . ? HOH D 218 . ? 1_555 ? 31 AC5 6 DG B 8 ? DG B 8 . ? 1_555 ? 32 AC5 6 HOH N . ? HOH B 206 . ? 1_555 ? 33 AC5 6 DG C 5 ? DG C 5 . ? 1_555 ? 34 AC5 6 HOH O . ? HOH C 207 . ? 1_555 ? 35 AC5 6 HOH O . ? HOH C 213 . ? 1_555 ? 36 AC5 6 HOH O . ? HOH C 228 . ? 1_555 ? 37 AC6 12 DG A 8 ? DG A 8 . ? 1_555 ? 38 AC6 12 DT B 10 ? DT B 10 . ? 1_555 ? 39 AC6 12 DG B 11 ? DG B 11 . ? 1_555 ? 40 AC6 12 HOH N . ? HOH B 213 . ? 1_555 ? 41 AC6 12 HOH N . ? HOH B 214 . ? 1_555 ? 42 AC6 12 HOH N . ? HOH B 224 . ? 1_555 ? 43 AC6 12 HOH N . ? HOH B 229 . ? 1_555 ? 44 AC6 12 HOH N . ? HOH B 235 . ? 1_555 ? 45 AC6 12 HOH N . ? HOH B 248 . ? 1_555 ? 46 AC6 12 DC D 3 ? DC D 3 . ? 1_555 ? 47 AC6 12 DT D 4 ? DT D 4 . ? 1_555 ? 48 AC6 12 DG D 5 ? DG D 5 . ? 1_555 ? 49 AC7 8 DC A 3 ? DC A 3 . ? 1_555 ? 50 AC7 8 DG A 5 ? DG A 5 . ? 1_555 ? 51 AC7 8 HOH M . ? HOH A 215 . ? 1_555 ? 52 AC7 8 DT C 10 ? DT C 10 . ? 1_555 ? 53 AC7 8 DG C 11 ? DG C 11 . ? 1_555 ? 54 AC7 8 HOH O . ? HOH C 225 . ? 1_555 ? 55 AC7 8 HOH O . ? HOH C 235 . ? 1_555 ? 56 AC7 8 DG D 8 ? DG D 8 . ? 1_555 ? 57 AC8 9 DC B 3 ? DC B 3 . ? 1_555 ? 58 AC8 9 DT B 4 ? DT B 4 . ? 1_555 ? 59 AC8 9 DG B 5 ? DG B 5 . ? 1_555 ? 60 AC8 9 DG C 8 ? DG C 8 . ? 1_555 ? 61 AC8 9 DT D 10 ? DT D 10 . ? 1_555 ? 62 AC8 9 DG D 11 ? DG D 11 . ? 1_555 ? 63 AC8 9 HOH P . ? HOH D 201 . ? 1_555 ? 64 AC8 9 HOH P . ? HOH D 218 . ? 1_555 ? 65 AC8 9 HOH P . ? HOH D 227 . ? 1_555 ? 66 AC9 6 DC B 3 ? DC B 3 . ? 1_555 ? 67 AC9 6 HOH N . ? HOH B 217 . ? 1_555 ? 68 AC9 6 HOH N . ? HOH B 232 . ? 1_555 ? 69 AC9 6 DG D 11 ? DG D 11 . ? 1_555 ? 70 AC9 6 DA D 12 ? DA D 12 . ? 1_555 ? 71 AC9 6 DA D 13 ? DA D 13 . ? 1_555 ? 72 AD1 5 DG A 11 ? DG A 11 . ? 1_555 ? 73 AD1 5 DA A 12 ? DA A 12 . ? 1_555 ? 74 AD1 5 DA A 13 ? DA A 13 . ? 1_555 ? 75 AD1 5 DC C 3 ? DC C 3 . ? 1_555 ? 76 AD1 5 HOH O . ? HOH C 212 . ? 1_555 ? 77 AD2 6 DG B 11 ? DG B 11 . ? 1_555 ? 78 AD2 6 DA B 12 ? DA B 12 . ? 1_555 ? 79 AD2 6 DA B 13 ? DA B 13 . ? 1_555 ? 80 AD2 6 DC D 3 ? DC D 3 . ? 1_555 ? 81 AD2 6 HOH P . ? HOH D 212 . ? 1_555 ? 82 AD2 6 HOH P . ? HOH D 219 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 214 ? ? O A HOH 242 ? ? 1.99 2 1 O B HOH 201 ? ? O C HOH 216 ? ? 2.09 3 1 O A HOH 223 ? ? O A HOH 242 ? ? 2.14 4 1 O A HOH 238 ? ? O A HOH 248 ? ? 2.14 5 1 O B HOH 202 ? ? O B HOH 246 ? ? 2.15 6 1 O C HOH 230 ? ? O C HOH 254 ? ? 2.18 7 1 O D HOH 204 ? ? O D HOH 239 ? ? 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O C HOH 232 ? ? 1_555 O C HOH 248 ? ? 2_546 2.04 2 1 O A HOH 243 ? ? 1_555 O A HOH 248 ? ? 2_445 2.18 3 1 O C HOH 226 ? ? 1_555 O C HOH 254 ? ? 2_556 2.19 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" B DT 2 ? ? "C3'" B DT 2 ? ? 1.381 1.419 -0.038 0.006 N 2 1 "O3'" C DC 6 ? ? "C3'" C DC 6 ? ? 1.383 1.419 -0.036 0.006 N # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -22.4645 17.0440 1.3827 0.1424 0.2113 0.3026 0.0365 0.0187 -0.0047 1.2658 2.6489 1.3178 1.0021 0.4403 0.0880 -0.1878 0.0297 0.1811 -0.1471 0.1571 0.3888 -0.0787 -0.0688 -0.0405 'X-RAY DIFFRACTION' 2 ? refined -16.9889 14.0150 -7.6107 0.2367 0.2301 0.1583 -0.0365 -0.0167 0.0071 2.8392 2.9199 1.9544 -1.9771 1.4178 -1.7717 0.1440 0.2709 -0.0353 -0.4009 -0.0483 0.2197 0.2355 -0.1432 -0.0086 'X-RAY DIFFRACTION' 3 ? refined -11.8618 13.8643 7.8759 0.2505 0.2025 0.2021 -0.0028 -0.0055 0.0282 1.5575 2.8655 2.9422 0.3956 1.2021 1.5906 0.1485 -0.3352 -0.0522 0.4291 -0.0458 0.0360 0.2917 -0.2640 -0.2256 'X-RAY DIFFRACTION' 4 ? refined -6.2664 16.9233 -1.2020 0.1950 0.1780 0.2038 0.0253 0.0001 -0.0507 2.3001 3.6209 1.3602 -1.9578 -0.2536 0.0652 0.0914 0.1247 0.1889 -0.2028 0.0001 -0.5330 0.2781 0.3396 -0.0353 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 2 through 13 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 2 through 13 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 2 through 13 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'D' and (resid 2 through 13 ) ; # _pdbx_entry_details.entry_id 6M4T _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal BRU N1 N N N 1 BRU C2 C N N 2 BRU N3 N N N 3 BRU C4 C N N 4 BRU C5 C N N 5 BRU C6 C N N 6 BRU O2 O N N 7 BRU O4 O N N 8 BRU BR BR N N 9 BRU "C1'" C N R 10 BRU "C2'" C N N 11 BRU "C3'" C N S 12 BRU "C4'" C N R 13 BRU "O3'" O N N 14 BRU "O4'" O N N 15 BRU "C5'" C N N 16 BRU "O5'" O N N 17 BRU P P N N 18 BRU OP1 O N N 19 BRU OP2 O N N 20 BRU OP3 O N N 21 BRU HN3 H N N 22 BRU H6 H N N 23 BRU "H1'" H N N 24 BRU "H2'" H N N 25 BRU "H2''" H N N 26 BRU "H3'" H N N 27 BRU "H4'" H N N 28 BRU "HO3'" H N N 29 BRU "H5'" H N N 30 BRU "H5''" H N N 31 BRU HOP2 H N N 32 BRU HOP3 H N N 33 CO CO CO N N 34 DA OP3 O N N 35 DA P P N N 36 DA OP1 O N N 37 DA OP2 O N N 38 DA "O5'" O N N 39 DA "C5'" C N N 40 DA "C4'" C N R 41 DA "O4'" O N N 42 DA "C3'" C N S 43 DA "O3'" O N N 44 DA "C2'" C N N 45 DA "C1'" C N R 46 DA N9 N Y N 47 DA C8 C Y N 48 DA N7 N Y N 49 DA C5 C Y N 50 DA C6 C Y N 51 DA N6 N N N 52 DA N1 N Y N 53 DA C2 C Y N 54 DA N3 N Y N 55 DA C4 C Y N 56 DA HOP3 H N N 57 DA HOP2 H N N 58 DA "H5'" H N N 59 DA "H5''" H N N 60 DA "H4'" H N N 61 DA "H3'" H N N 62 DA "HO3'" H N N 63 DA "H2'" H N N 64 DA "H2''" H N N 65 DA "H1'" H N N 66 DA H8 H N N 67 DA H61 H N N 68 DA H62 H N N 69 DA H2 H N N 70 DC OP3 O N N 71 DC P P N N 72 DC OP1 O N N 73 DC OP2 O N N 74 DC "O5'" O N N 75 DC "C5'" C N N 76 DC "C4'" C N R 77 DC "O4'" O N N 78 DC "C3'" C N S 79 DC "O3'" O N N 80 DC "C2'" C N N 81 DC "C1'" C N R 82 DC N1 N N N 83 DC C2 C N N 84 DC O2 O N N 85 DC N3 N N N 86 DC C4 C N N 87 DC N4 N N N 88 DC C5 C N N 89 DC C6 C N N 90 DC HOP3 H N N 91 DC HOP2 H N N 92 DC "H5'" H N N 93 DC "H5''" H N N 94 DC "H4'" H N N 95 DC "H3'" H N N 96 DC "HO3'" H N N 97 DC "H2'" H N N 98 DC "H2''" H N N 99 DC "H1'" H N N 100 DC H41 H N N 101 DC H42 H N N 102 DC H5 H N N 103 DC H6 H N N 104 DG OP3 O N N 105 DG P P N N 106 DG OP1 O N N 107 DG OP2 O N N 108 DG "O5'" O N N 109 DG "C5'" C N N 110 DG "C4'" C N R 111 DG "O4'" O N N 112 DG "C3'" C N S 113 DG "O3'" O N N 114 DG "C2'" C N N 115 DG "C1'" C N R 116 DG N9 N Y N 117 DG C8 C Y N 118 DG N7 N Y N 119 DG C5 C Y N 120 DG C6 C N N 121 DG O6 O N N 122 DG N1 N N N 123 DG C2 C N N 124 DG N2 N N N 125 DG N3 N N N 126 DG C4 C Y N 127 DG HOP3 H N N 128 DG HOP2 H N N 129 DG "H5'" H N N 130 DG "H5''" H N N 131 DG "H4'" H N N 132 DG "H3'" H N N 133 DG "HO3'" H N N 134 DG "H2'" H N N 135 DG "H2''" H N N 136 DG "H1'" H N N 137 DG H8 H N N 138 DG H1 H N N 139 DG H21 H N N 140 DG H22 H N N 141 DT OP3 O N N 142 DT P P N N 143 DT OP1 O N N 144 DT OP2 O N N 145 DT "O5'" O N N 146 DT "C5'" C N N 147 DT "C4'" C N R 148 DT "O4'" O N N 149 DT "C3'" C N S 150 DT "O3'" O N N 151 DT "C2'" C N N 152 DT "C1'" C N R 153 DT N1 N N N 154 DT C2 C N N 155 DT O2 O N N 156 DT N3 N N N 157 DT C4 C N N 158 DT O4 O N N 159 DT C5 C N N 160 DT C7 C N N 161 DT C6 C N N 162 DT HOP3 H N N 163 DT HOP2 H N N 164 DT "H5'" H N N 165 DT "H5''" H N N 166 DT "H4'" H N N 167 DT "H3'" H N N 168 DT "HO3'" H N N 169 DT "H2'" H N N 170 DT "H2''" H N N 171 DT "H1'" H N N 172 DT H3 H N N 173 DT H71 H N N 174 DT H72 H N N 175 DT H73 H N N 176 DT H6 H N N 177 F1R CAI C Y N 178 F1R CAJ C Y N 179 F1R CAK C Y N 180 F1R CAL C Y N 181 F1R CAM C Y N 182 F1R CAN C Y N 183 F1R CAO C Y N 184 F1R CAP C Y N 185 F1R CAQ C Y N 186 F1R CAR C Y N 187 F1R CAS C Y N 188 F1R CAT C N N 189 F1R CAU C Y N 190 F1R CAV C Y N 191 F1R CAW C Y N 192 F1R CAX C Y N 193 F1R CAY C Y N 194 F1R CBB C N N 195 F1R CBC C N N 196 F1R CBD C N N 197 F1R CBE C N N 198 F1R NAA N Y N 199 F1R NAB N N N 200 F1R NAC N N N 201 F1R NAD N Y N 202 F1R NAE N N N 203 F1R NAF N Y N 204 F1R NAG N N N 205 F1R NAH N Y N 206 F1R OAZ O N N 207 F1R CLA CL N N 208 F1R H1 H N N 209 F1R H2 H N N 210 F1R H3 H N N 211 F1R H4 H N N 212 F1R H5 H N N 213 F1R H6 H N N 214 F1R H7 H N N 215 F1R H8 H N N 216 F1R H9 H N N 217 F1R H10 H N N 218 F1R H11 H N N 219 F1R H12 H N N 220 F1R H13 H N N 221 F1R H14 H N N 222 F1R H15 H N N 223 F1R H16 H N N 224 F1R H17 H N N 225 F1R H18 H N N 226 F1R H19 H N N 227 F1R H20 H N N 228 F1R H21 H N N 229 F1R H22 H N N 230 F1R H23 H N N 231 HOH O O N N 232 HOH H1 H N N 233 HOH H2 H N N 234 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal BRU N1 C2 sing N N 1 BRU N1 C6 sing N N 2 BRU N1 "C1'" sing N N 3 BRU C2 N3 sing N N 4 BRU C2 O2 doub N N 5 BRU N3 C4 sing N N 6 BRU N3 HN3 sing N N 7 BRU C4 C5 sing N N 8 BRU C4 O4 doub N N 9 BRU C5 C6 doub N N 10 BRU C5 BR sing N N 11 BRU C6 H6 sing N N 12 BRU "C1'" "C2'" sing N N 13 BRU "C1'" "O4'" sing N N 14 BRU "C1'" "H1'" sing N N 15 BRU "C2'" "C3'" sing N N 16 BRU "C2'" "H2'" sing N N 17 BRU "C2'" "H2''" sing N N 18 BRU "C3'" "C4'" sing N N 19 BRU "C3'" "O3'" sing N N 20 BRU "C3'" "H3'" sing N N 21 BRU "C4'" "O4'" sing N N 22 BRU "C4'" "C5'" sing N N 23 BRU "C4'" "H4'" sing N N 24 BRU "O3'" "HO3'" sing N N 25 BRU "C5'" "O5'" sing N N 26 BRU "C5'" "H5'" sing N N 27 BRU "C5'" "H5''" sing N N 28 BRU "O5'" P sing N N 29 BRU P OP1 doub N N 30 BRU P OP2 sing N N 31 BRU P OP3 sing N N 32 BRU OP2 HOP2 sing N N 33 BRU OP3 HOP3 sing N N 34 DA OP3 P sing N N 35 DA OP3 HOP3 sing N N 36 DA P OP1 doub N N 37 DA P OP2 sing N N 38 DA P "O5'" sing N N 39 DA OP2 HOP2 sing N N 40 DA "O5'" "C5'" sing N N 41 DA "C5'" "C4'" sing N N 42 DA "C5'" "H5'" sing N N 43 DA "C5'" "H5''" sing N N 44 DA "C4'" "O4'" sing N N 45 DA "C4'" "C3'" sing N N 46 DA "C4'" "H4'" sing N N 47 DA "O4'" "C1'" sing N N 48 DA "C3'" "O3'" sing N N 49 DA "C3'" "C2'" sing N N 50 DA "C3'" "H3'" sing N N 51 DA "O3'" "HO3'" sing N N 52 DA "C2'" "C1'" sing N N 53 DA "C2'" "H2'" sing N N 54 DA "C2'" "H2''" sing N N 55 DA "C1'" N9 sing N N 56 DA "C1'" "H1'" sing N N 57 DA N9 C8 sing Y N 58 DA N9 C4 sing Y N 59 DA C8 N7 doub Y N 60 DA C8 H8 sing N N 61 DA N7 C5 sing Y N 62 DA C5 C6 sing Y N 63 DA C5 C4 doub Y N 64 DA C6 N6 sing N N 65 DA C6 N1 doub Y N 66 DA N6 H61 sing N N 67 DA N6 H62 sing N N 68 DA N1 C2 sing Y N 69 DA C2 N3 doub Y N 70 DA C2 H2 sing N N 71 DA N3 C4 sing Y N 72 DC OP3 P sing N N 73 DC OP3 HOP3 sing N N 74 DC P OP1 doub N N 75 DC P OP2 sing N N 76 DC P "O5'" sing N N 77 DC OP2 HOP2 sing N N 78 DC "O5'" "C5'" sing N N 79 DC "C5'" "C4'" sing N N 80 DC "C5'" "H5'" sing N N 81 DC "C5'" "H5''" sing N N 82 DC "C4'" "O4'" sing N N 83 DC "C4'" "C3'" sing N N 84 DC "C4'" "H4'" sing N N 85 DC "O4'" "C1'" sing N N 86 DC "C3'" "O3'" sing N N 87 DC "C3'" "C2'" sing N N 88 DC "C3'" "H3'" sing N N 89 DC "O3'" "HO3'" sing N N 90 DC "C2'" "C1'" sing N N 91 DC "C2'" "H2'" sing N N 92 DC "C2'" "H2''" sing N N 93 DC "C1'" N1 sing N N 94 DC "C1'" "H1'" sing N N 95 DC N1 C2 sing N N 96 DC N1 C6 sing N N 97 DC C2 O2 doub N N 98 DC C2 N3 sing N N 99 DC N3 C4 doub N N 100 DC C4 N4 sing N N 101 DC C4 C5 sing N N 102 DC N4 H41 sing N N 103 DC N4 H42 sing N N 104 DC C5 C6 doub N N 105 DC C5 H5 sing N N 106 DC C6 H6 sing N N 107 DG OP3 P sing N N 108 DG OP3 HOP3 sing N N 109 DG P OP1 doub N N 110 DG P OP2 sing N N 111 DG P "O5'" sing N N 112 DG OP2 HOP2 sing N N 113 DG "O5'" "C5'" sing N N 114 DG "C5'" "C4'" sing N N 115 DG "C5'" "H5'" sing N N 116 DG "C5'" "H5''" sing N N 117 DG "C4'" "O4'" sing N N 118 DG "C4'" "C3'" sing N N 119 DG "C4'" "H4'" sing N N 120 DG "O4'" "C1'" sing N N 121 DG "C3'" "O3'" sing N N 122 DG "C3'" "C2'" sing N N 123 DG "C3'" "H3'" sing N N 124 DG "O3'" "HO3'" sing N N 125 DG "C2'" "C1'" sing N N 126 DG "C2'" "H2'" sing N N 127 DG "C2'" "H2''" sing N N 128 DG "C1'" N9 sing N N 129 DG "C1'" "H1'" sing N N 130 DG N9 C8 sing Y N 131 DG N9 C4 sing Y N 132 DG C8 N7 doub Y N 133 DG C8 H8 sing N N 134 DG N7 C5 sing Y N 135 DG C5 C6 sing N N 136 DG C5 C4 doub Y N 137 DG C6 O6 doub N N 138 DG C6 N1 sing N N 139 DG N1 C2 sing N N 140 DG N1 H1 sing N N 141 DG C2 N2 sing N N 142 DG C2 N3 doub N N 143 DG N2 H21 sing N N 144 DG N2 H22 sing N N 145 DG N3 C4 sing N N 146 DT OP3 P sing N N 147 DT OP3 HOP3 sing N N 148 DT P OP1 doub N N 149 DT P OP2 sing N N 150 DT P "O5'" sing N N 151 DT OP2 HOP2 sing N N 152 DT "O5'" "C5'" sing N N 153 DT "C5'" "C4'" sing N N 154 DT "C5'" "H5'" sing N N 155 DT "C5'" "H5''" sing N N 156 DT "C4'" "O4'" sing N N 157 DT "C4'" "C3'" sing N N 158 DT "C4'" "H4'" sing N N 159 DT "O4'" "C1'" sing N N 160 DT "C3'" "O3'" sing N N 161 DT "C3'" "C2'" sing N N 162 DT "C3'" "H3'" sing N N 163 DT "O3'" "HO3'" sing N N 164 DT "C2'" "C1'" sing N N 165 DT "C2'" "H2'" sing N N 166 DT "C2'" "H2''" sing N N 167 DT "C1'" N1 sing N N 168 DT "C1'" "H1'" sing N N 169 DT N1 C2 sing N N 170 DT N1 C6 sing N N 171 DT C2 O2 doub N N 172 DT C2 N3 sing N N 173 DT N3 C4 sing N N 174 DT N3 H3 sing N N 175 DT C4 O4 doub N N 176 DT C4 C5 sing N N 177 DT C5 C7 sing N N 178 DT C5 C6 doub N N 179 DT C7 H71 sing N N 180 DT C7 H72 sing N N 181 DT C7 H73 sing N N 182 DT C6 H6 sing N N 183 F1R CLA CAI sing N N 184 F1R CAN CAI doub Y N 185 F1R CAN CAM sing Y N 186 F1R CAI CAJ sing Y N 187 F1R NAA CAM doub Y N 188 F1R NAA CAO sing Y N 189 F1R CAV CAO doub Y N 190 F1R CAV CAU sing Y N 191 F1R CAM CAL sing Y N 192 F1R CAO CAP sing Y N 193 F1R CAU CAS doub Y N 194 F1R CAJ CAK doub Y N 195 F1R CAL CAK sing Y N 196 F1R CAL CAQ doub Y N 197 F1R CAP CAQ sing Y N 198 F1R CAP CAR doub Y N 199 F1R CAS CAR sing Y N 200 F1R CAS OAZ sing N N 201 F1R CAQ NAB sing N N 202 F1R NAG CAY sing N N 203 F1R OAZ CAT sing N N 204 F1R NAB CBB sing N N 205 F1R CAY NAH doub Y N 206 F1R CAY NAF sing Y N 207 F1R NAH CAW sing Y N 208 F1R NAF CAX doub Y N 209 F1R CBB CBC sing N N 210 F1R CAW NAC sing N N 211 F1R CAW NAD doub Y N 212 F1R CAX NAD sing Y N 213 F1R CAX NAE sing N N 214 F1R CBC CBD sing N N 215 F1R NAE CBE sing N N 216 F1R CBD CBE sing N N 217 F1R CAJ H1 sing N N 218 F1R CAK H2 sing N N 219 F1R CAN H3 sing N N 220 F1R CAR H4 sing N N 221 F1R CAT H5 sing N N 222 F1R CAT H6 sing N N 223 F1R CAT H7 sing N N 224 F1R CAU H8 sing N N 225 F1R CAV H9 sing N N 226 F1R CBB H10 sing N N 227 F1R CBB H11 sing N N 228 F1R CBC H12 sing N N 229 F1R CBC H13 sing N N 230 F1R CBD H14 sing N N 231 F1R CBD H15 sing N N 232 F1R CBE H16 sing N N 233 F1R CBE H17 sing N N 234 F1R NAB H18 sing N N 235 F1R NAC H19 sing N N 236 F1R NAC H20 sing N N 237 F1R NAE H21 sing N N 238 F1R NAG H22 sing N N 239 F1R NAG H23 sing N N 240 HOH O H1 sing N N 241 HOH O H2 sing N N 242 # _ndb_struct_conf_na.entry_id 6M4T _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A BRU 1 1_555 C DA 13 1_555 -0.780 0.063 1.579 -25.559 -21.152 0.873 1 A_BRU1:DA13_C A 1 ? C 13 ? 20 1 1 A DT 2 1_555 C DA 12 1_555 -0.183 -0.114 0.208 -7.767 -23.594 -0.285 2 A_DT2:DA12_C A 2 ? C 12 ? 20 1 1 A DC 3 1_555 C DG 11 1_555 0.248 -0.347 -0.002 -4.008 -14.126 1.593 3 A_DC3:DG11_C A 3 ? C 11 ? 19 1 1 A DG 5 1_555 B DC 6 1_555 -0.293 -0.127 -0.746 -0.158 8.218 -1.069 4 A_DG5:DC6_B A 5 ? B 6 ? 19 1 1 A DC 6 1_555 B DG 5 1_555 0.102 -0.151 -0.602 10.017 4.111 -2.554 5 A_DC6:DG5_B A 6 ? B 5 ? 19 1 1 A DG 8 1_555 B DC 9 1_555 -0.525 -0.279 0.194 2.143 -5.313 -1.153 6 A_DG8:DC9_B A 8 ? B 9 ? 19 1 1 A DC 9 1_555 B DG 8 1_555 -0.018 -0.150 0.369 -5.989 -5.537 -0.705 7 A_DC9:DG8_B A 9 ? B 8 ? 19 1 1 A DG 11 1_555 C DC 3 1_555 -0.324 -0.434 -0.617 -4.191 -16.941 0.774 8 A_DG11:DC3_C A 11 ? C 3 ? 19 1 1 A DA 12 1_555 C DT 2 1_555 0.205 -0.110 0.328 4.887 -31.449 3.218 9 A_DA12:DT2_C A 12 ? C 2 ? 20 1 1 A DA 13 1_555 C BRU 1 1_555 0.181 -0.112 0.842 17.083 -2.119 0.565 10 A_DA13:BRU1_C A 13 ? C 1 ? 20 1 1 B BRU 1 1_555 D DA 13 1_555 0.036 -0.061 0.665 -17.790 -15.998 3.005 11 B_BRU1:DA13_D B 1 ? D 13 ? 20 1 1 B DT 2 1_555 D DA 12 1_555 -0.272 -0.124 0.072 -5.774 -6.347 -2.508 12 B_DT2:DA12_D B 2 ? D 12 ? 20 1 1 B DC 3 1_555 D DG 11 1_555 0.293 -0.015 0.187 2.951 -15.496 4.305 13 B_DC3:DG11_D B 3 ? D 11 ? 19 1 1 B DG 11 1_555 D DC 3 1_555 -0.218 -0.109 -0.276 -8.976 -15.157 3.909 14 B_DG11:DC3_D B 11 ? D 3 ? 19 1 1 B DA 12 1_555 D DT 2 1_555 -0.023 -0.125 0.054 -0.898 -14.212 0.022 15 B_DA12:DT2_D B 12 ? D 2 ? 20 1 1 B DA 13 1_555 D BRU 1 1_555 -0.349 -0.102 0.575 16.693 -1.998 -1.167 16 B_DA13:BRU1_D B 13 ? D 1 ? 20 1 1 C DG 5 1_555 D DC 6 1_555 -0.386 -0.153 0.018 1.096 1.938 1.217 17 C_DG5:DC6_D C 5 ? D 6 ? 19 1 1 C DC 6 1_555 D DG 5 1_555 0.208 -0.163 -0.070 4.129 6.073 -0.541 18 C_DC6:DG5_D C 6 ? D 5 ? 19 1 1 C DG 8 1_555 D DC 9 1_555 -0.494 -0.242 -0.023 -0.102 -6.472 -3.222 19 C_DG8:DC9_D C 8 ? D 9 ? 19 1 1 C DC 9 1_555 D DG 8 1_555 -0.011 -0.023 0.330 -4.293 -3.752 -1.043 20 C_DC9:DG8_D C 9 ? D 8 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A BRU 1 1_555 C DA 13 1_555 A DT 2 1_555 C DA 12 1_555 -0.141 -0.402 2.604 12.289 -3.095 37.849 -0.305 1.340 2.467 -4.617 -18.328 39.840 1 AA_BRU1DT2:DA12DA13_CC A 1 ? C 13 ? A 2 ? C 12 ? 1 A DT 2 1_555 C DA 12 1_555 A DC 3 1_555 C DG 11 1_555 0.788 1.966 3.105 6.871 -2.181 43.966 2.787 -0.436 3.092 -2.890 -9.104 44.524 2 AA_DT2DC3:DG11DA12_CC A 2 ? C 12 ? A 3 ? C 11 ? 1 A DG 5 1_555 B DC 6 1_555 A DC 6 1_555 B DG 5 1_555 -0.109 -0.470 3.051 -1.932 3.935 24.318 -2.205 -0.288 2.939 9.245 4.539 24.704 3 AA_DG5DC6:DG5DC6_BB A 5 ? B 6 ? A 6 ? B 5 ? 1 A DG 8 1_555 B DC 9 1_555 A DC 9 1_555 B DG 8 1_555 0.064 -1.812 3.700 -0.295 -6.801 41.747 -1.694 -0.123 3.934 -9.468 0.410 42.274 4 AA_DG8DC9:DG8DC9_BB A 8 ? B 9 ? A 9 ? B 8 ? 1 A DG 11 1_555 C DC 3 1_555 A DA 12 1_555 C DT 2 1_555 -0.741 2.194 2.979 -11.604 -4.631 44.604 3.153 0.045 2.847 -5.964 14.944 46.234 5 AA_DG11DA12:DT2DC3_CC A 11 ? C 3 ? A 12 ? C 2 ? 1 A DA 12 1_555 C DT 2 1_555 A DA 13 1_555 C BRU 1 1_555 0.607 -0.054 2.838 -6.132 -9.349 35.857 0.964 -1.632 2.634 -14.749 9.674 37.505 6 AA_DA12DA13:BRU1DT2_CC A 12 ? C 2 ? A 13 ? C 1 ? 1 B BRU 1 1_555 D DA 13 1_555 B DT 2 1_555 D DA 12 1_555 -0.208 -0.142 2.894 5.123 5.552 27.976 -1.360 1.409 2.735 11.228 -10.360 28.958 7 BB_BRU1DT2:DA12DA13_DD B 1 ? D 13 ? B 2 ? D 12 ? 1 B DT 2 1_555 D DA 12 1_555 B DC 3 1_555 D DG 11 1_555 0.435 2.087 3.143 2.685 -7.303 48.529 3.016 -0.337 2.838 -8.819 -3.243 49.112 8 BB_DT2DC3:DG11DA12_DD B 2 ? D 12 ? B 3 ? D 11 ? 1 B DG 11 1_555 D DC 3 1_555 B DA 12 1_555 D DT 2 1_555 -0.403 2.275 3.159 -3.279 -9.002 47.454 3.413 0.260 2.730 -11.054 4.026 48.356 9 BB_DG11DA12:DT2DC3_DD B 11 ? D 3 ? B 12 ? D 2 ? 1 B DA 12 1_555 D DT 2 1_555 B DA 13 1_555 D BRU 1 1_555 0.391 -0.027 2.764 -5.407 1.752 28.648 -0.372 -1.757 2.640 3.496 10.793 29.195 10 BB_DA12DA13:BRU1DT2_DD B 12 ? D 2 ? B 13 ? D 1 ? 1 C DG 5 1_555 D DC 6 1_555 C DC 6 1_555 D DG 5 1_555 -0.086 -0.644 3.192 -0.510 7.036 25.683 -3.152 0.059 2.916 15.460 1.120 26.618 11 CC_DG5DC6:DG5DC6_DD C 5 ? D 6 ? C 6 ? D 5 ? 1 C DG 8 1_555 D DC 9 1_555 C DC 9 1_555 D DG 8 1_555 0.038 -1.648 3.738 -2.076 -9.861 42.307 -1.080 -0.292 4.000 -13.434 2.828 43.437 12 CC_DG8DC9:DG8DC9_DD C 8 ? D 9 ? C 9 ? D 8 ? # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 BRU ? ? BRU ? ? 'SUBJECT OF INVESTIGATION' ? 2 CO ? ? CO ? ? 'SUBJECT OF INVESTIGATION' ? 3 F1R ? ? F1R ? ? 'SUBJECT OF INVESTIGATION' ? # _atom_sites.entry_id 6M4T _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.017481 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.010625 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015967 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.039345 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol BR C CL CO N O P # loop_