HEADER FLUORESCENT PROTEIN 24-AUG-18 6M9Z TITLE X-RAY STRUCTURE OF BRANCHIOSTOMA FLORIDAE FLUORESCENT PROTEIN LANFP6G COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLUORESCENT PROTEIN LANFP6G; COMPND 3 CHAIN: A, D; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: HYDROLYSIS OF POLYPEPTIDE CHAIN BETWEEN RESIDUES GLY58 COMPND 6 AND TYR59 IN CONFORMER A SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BRANCHIOSTOMA FLORIDAE; SOURCE 3 ORGANISM_COMMON: FLORIDA LANCELET; SOURCE 4 ORGANISM_TAXID: 7739; SOURCE 5 GENE: BRAFLDRAFT_75521; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FLUORESCENT PROTEIN BRANCHIOSTOMA FLORIDAE GLY-TYR-GLY CHROMOPHORE, KEYWDS 2 FLUORESCENT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR L.MUSLINKINA,N.PLETNEVA,V.PLETNEV,S.PLETNEV REVDAT 5 15-NOV-23 6M9Z 1 REMARK REVDAT 4 11-OCT-23 6M9Z 1 REMARK REVDAT 3 04-DEC-19 6M9Z 1 REMARK REVDAT 2 17-APR-19 6M9Z 1 JRNL REVDAT 1 03-APR-19 6M9Z 0 JRNL AUTH L.MUSLINKINA,A.ROLDAN-SALGADO,P.GAYTAN,V.R.JUAREZ-GONZALEZ, JRNL AUTH 2 E.RUDINO,N.PLETNEVA,V.PLETNEV,Z.DAUTER,S.PLETNEV JRNL TITL STRUCTURAL FACTORS ENABLING SUCCESSFUL GFP-LIKE PROTEINS JRNL TITL 2 WITH ALANINE AS THE THIRD CHROMOPHORE-FORMING RESIDUE. JRNL REF J. MOL. BIOL. V. 431 1397 2019 JRNL REFN ESSN 1089-8638 JRNL PMID 30797856 JRNL DOI 10.1016/J.JMB.2019.02.013 REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 152375 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.128 REMARK 3 R VALUE (WORKING SET) : 0.128 REMARK 3 FREE R VALUE : 0.146 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1606 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.24 REMARK 3 REFLECTION IN BIN (WORKING SET) : 10514 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.54 REMARK 3 BIN R VALUE (WORKING SET) : 0.2330 REMARK 3 BIN FREE R VALUE SET COUNT : 123 REMARK 3 BIN FREE R VALUE : 0.2200 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3516 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 503 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.12000 REMARK 3 B22 (A**2) : -0.05000 REMARK 3 B33 (A**2) : -0.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.25000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.030 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.030 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.020 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.981 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.977 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3810 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3473 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5181 ; 1.853 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8061 ; 1.026 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 468 ; 7.064 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 181 ;42.016 ;25.028 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 626 ;11.612 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;13.063 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 531 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4426 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 924 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1845 ; 1.578 ; 1.515 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1844 ; 1.577 ; 1.515 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2326 ; 2.195 ; 2.278 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2327 ; 2.195 ; 2.279 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1965 ; 3.200 ; 1.848 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1966 ; 3.199 ; 1.848 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2856 ; 3.357 ; 2.628 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 7283 ; 4.760 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 106 ;20.594 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 7560 ; 9.410 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6M9Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1000236438. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 153983 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.04600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.53200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4HVF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M NA ACETATE PH 7.0, 12% PEG 3350, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 40.95950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 65.69100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 40.95950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 65.69100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 81.91900 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 528 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 547 LIES ON A SPECIAL POSITION. REMARK 375 HOH D 516 LIES ON A SPECIAL POSITION. REMARK 400 REMARK 400 COMPOUND REMARK 400 IN THIS PROTEIN POSTTRANSLATIONAL CHEMISTRY UNDERGOES TWO REMARK 400 ALTERNATIVE ROUTES: THE HYDROLYSIS OF POLYPEPTIDE CHAIN BETWEEN REMARK 400 RESIDUES GLY58 AND TYR59 OR CYCLIZATION OF GLY58-TYR59-GLY60 REMARK 400 TRIPEPTIDE TO FORM THE CHROMOPHORE REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 220 REMARK 465 SER A 221 REMARK 465 GLY A 222 REMARK 465 GLY A 223 REMARK 465 SER A 224 REMARK 465 HIS A 225 REMARK 465 HIS A 226 REMARK 465 HIS A 227 REMARK 465 HIS A 228 REMARK 465 HIS A 229 REMARK 465 HIS A 230 REMARK 465 MET D 1 REMARK 465 LYS D 220 REMARK 465 SER D 221 REMARK 465 GLY D 222 REMARK 465 GLY D 223 REMARK 465 SER D 224 REMARK 465 HIS D 225 REMARK 465 HIS D 226 REMARK 465 HIS D 227 REMARK 465 HIS D 228 REMARK 465 HIS D 229 REMARK 465 HIS D 230 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 35 O GLY A 58 1.96 REMARK 500 OE1 GLU D 35 O GLY D 58 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG D 88 CG - CD - NE ANGL. DEV. = -13.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 43 -119.06 -124.24 REMARK 500 GLU A 81 12.14 57.13 REMARK 500 ASN D 43 -125.42 -131.07 REMARK 500 GLU D 81 12.85 57.44 REMARK 500 GLU D 81 12.85 57.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG D 88 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 6M9Z A 1 220 UNP C3YRA1 C3YRA1_BRAFL 49 268 DBREF 6M9Z D 1 220 UNP C3YRA1 C3YRA1_BRAFL 49 268 SEQADV 6M9Z GLY A 60 UNP C3YRA1 ALA 108 CONFLICT SEQADV 6M9Z SER A 221 UNP C3YRA1 EXPRESSION TAG SEQADV 6M9Z GLY A 222 UNP C3YRA1 EXPRESSION TAG SEQADV 6M9Z GLY A 223 UNP C3YRA1 EXPRESSION TAG SEQADV 6M9Z SER A 224 UNP C3YRA1 EXPRESSION TAG SEQADV 6M9Z HIS A 225 UNP C3YRA1 EXPRESSION TAG SEQADV 6M9Z HIS A 226 UNP C3YRA1 EXPRESSION TAG SEQADV 6M9Z HIS A 227 UNP C3YRA1 EXPRESSION TAG SEQADV 6M9Z HIS A 228 UNP C3YRA1 EXPRESSION TAG SEQADV 6M9Z HIS A 229 UNP C3YRA1 EXPRESSION TAG SEQADV 6M9Z HIS A 230 UNP C3YRA1 EXPRESSION TAG SEQADV 6M9Z GLY D 60 UNP C3YRA1 ALA 108 CONFLICT SEQADV 6M9Z SER D 221 UNP C3YRA1 EXPRESSION TAG SEQADV 6M9Z GLY D 222 UNP C3YRA1 EXPRESSION TAG SEQADV 6M9Z GLY D 223 UNP C3YRA1 EXPRESSION TAG SEQADV 6M9Z SER D 224 UNP C3YRA1 EXPRESSION TAG SEQADV 6M9Z HIS D 225 UNP C3YRA1 EXPRESSION TAG SEQADV 6M9Z HIS D 226 UNP C3YRA1 EXPRESSION TAG SEQADV 6M9Z HIS D 227 UNP C3YRA1 EXPRESSION TAG SEQADV 6M9Z HIS D 228 UNP C3YRA1 EXPRESSION TAG SEQADV 6M9Z HIS D 229 UNP C3YRA1 EXPRESSION TAG SEQADV 6M9Z HIS D 230 UNP C3YRA1 EXPRESSION TAG SEQRES 1 A 230 MET PRO LEU PRO LYS THR HIS GLU LEU HIS ILE PHE GLY SEQRES 2 A 230 SER PHE ASN GLY VAL LYS PHE ASP MET VAL GLY GLU GLY SEQRES 3 A 230 THR GLY ASN PRO ASN GLU GLY SER GLU GLU LEU LYS LEU SEQRES 4 A 230 LYS SER THR ASN GLY PRO LEU LYS PHE SER PRO TYR ILE SEQRES 5 A 230 LEU VAL PRO HIS LEU GLY TYR GLY PHE ASN GLN TYR LEU SEQRES 6 A 230 PRO PHE PRO ASP GLY MET SER PRO PHE GLN ALA ALA MET SEQRES 7 A 230 GLN ASP GLU SER GLY TYR GLN VAL HIS ARG THR LEU GLN SEQRES 8 A 230 TYR GLU ASP GLY ALA PHE VAL THR ALA ASN LEU ARG TYR SEQRES 9 A 230 THR TYR GLU GLY SER HIS ILE LYS GLY GLU PHE GLN VAL SEQRES 10 A 230 ILE GLY THR GLY PHE PRO PRO ASP GLY PRO VAL MET THR SEQRES 11 A 230 ASN LYS LEU THR ALA LEU ASP TRP SER VAL VAL LYS PHE SEQRES 12 A 230 VAL TYR PRO ASN ASP LYS THR ILE LEU SER THR PHE ASP SEQRES 13 A 230 LYS THR TYR THR THR THR ASP GLY LYS ARG TYR GLN CYS SEQRES 14 A 230 THR PHE ARG GLU ASN ASN THR PHE ALA LYS PRO MET ALA SEQRES 15 A 230 ALA ASP ILE LEU GLN LYS GLN PRO MET PHE ILE PHE HIS SEQRES 16 A 230 LYS THR GLU LEU GLN HIS SER ASN ASN ALA GLU LEU THR SEQRES 17 A 230 PHE LYS GLU LYS GLN THR ALA PHE SER ASP MET LYS SER SEQRES 18 A 230 GLY GLY SER HIS HIS HIS HIS HIS HIS SEQRES 1 D 230 MET PRO LEU PRO LYS THR HIS GLU LEU HIS ILE PHE GLY SEQRES 2 D 230 SER PHE ASN GLY VAL LYS PHE ASP MET VAL GLY GLU GLY SEQRES 3 D 230 THR GLY ASN PRO ASN GLU GLY SER GLU GLU LEU LYS LEU SEQRES 4 D 230 LYS SER THR ASN GLY PRO LEU LYS PHE SER PRO TYR ILE SEQRES 5 D 230 LEU VAL PRO HIS LEU GLY TYR GLY PHE ASN GLN TYR LEU SEQRES 6 D 230 PRO PHE PRO ASP GLY MET SER PRO PHE GLN ALA ALA MET SEQRES 7 D 230 GLN ASP GLU SER GLY TYR GLN VAL HIS ARG THR LEU GLN SEQRES 8 D 230 TYR GLU ASP GLY ALA PHE VAL THR ALA ASN LEU ARG TYR SEQRES 9 D 230 THR TYR GLU GLY SER HIS ILE LYS GLY GLU PHE GLN VAL SEQRES 10 D 230 ILE GLY THR GLY PHE PRO PRO ASP GLY PRO VAL MET THR SEQRES 11 D 230 ASN LYS LEU THR ALA LEU ASP TRP SER VAL VAL LYS PHE SEQRES 12 D 230 VAL TYR PRO ASN ASP LYS THR ILE LEU SER THR PHE ASP SEQRES 13 D 230 LYS THR TYR THR THR THR ASP GLY LYS ARG TYR GLN CYS SEQRES 14 D 230 THR PHE ARG GLU ASN ASN THR PHE ALA LYS PRO MET ALA SEQRES 15 D 230 ALA ASP ILE LEU GLN LYS GLN PRO MET PHE ILE PHE HIS SEQRES 16 D 230 LYS THR GLU LEU GLN HIS SER ASN ASN ALA GLU LEU THR SEQRES 17 D 230 PHE LYS GLU LYS GLN THR ALA PHE SER ASP MET LYS SER SEQRES 18 D 230 GLY GLY SER HIS HIS HIS HIS HIS HIS HET CR2 A 58 19 HET CR2 D 58 19 HETNAM CR2 {(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]- HETNAM 2 CR2 5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC ACID HETSYN CR2 CHROMOPHORE (GLY-TYR-GLY) FORMUL 1 CR2 2(C13 H13 N3 O4) FORMUL 3 HOH *503(H2 O) HELIX 1 AA1 SER A 49 LEU A 57 5 9 HELIX 2 AA2 PHE A 61 TYR A 64 5 4 HELIX 3 AA3 SER A 72 ASP A 80 1 9 HELIX 4 AA4 ALA A 182 GLN A 187 1 6 HELIX 5 AA5 SER D 49 LEU D 57 5 9 HELIX 6 AA6 PHE D 61 TYR D 64 5 4 HELIX 7 AA7 SER D 72 ASP D 80 1 9 HELIX 8 AA8 ALA D 182 GLN D 187 1 6 SHEET 1 AA113 LEU A 133 LEU A 136 0 SHEET 2 AA113 THR A 150 THR A 161 -1 O THR A 160 N THR A 134 SHEET 3 AA113 ARG A 166 PHE A 177 -1 O CYS A 169 N LYS A 157 SHEET 4 AA113 TYR A 84 TYR A 92 -1 N HIS A 87 O ASN A 174 SHEET 5 AA113 PHE A 97 GLU A 107 -1 O VAL A 98 N LEU A 90 SHEET 6 AA113 HIS A 110 THR A 120 -1 O LYS A 112 N THR A 105 SHEET 7 AA113 THR A 6 PHE A 15 1 N SER A 14 O GLY A 119 SHEET 8 AA113 VAL A 18 ASN A 29 -1 O GLY A 26 N HIS A 7 SHEET 9 AA113 SER A 34 SER A 41 -1 O GLU A 36 N THR A 27 SHEET 10 AA113 GLU A 206 PHE A 216 -1 O PHE A 209 N LEU A 37 SHEET 11 AA113 MET A 191 ASN A 203 -1 N GLN A 200 O THR A 208 SHEET 12 AA113 SER A 139 ASN A 147 -1 N PHE A 143 O MET A 191 SHEET 13 AA113 THR A 150 THR A 161 -1 O LEU A 152 N VAL A 144 SHEET 1 AA2 2 PRO A 66 PHE A 67 0 SHEET 2 AA2 2 GLY A 70 MET A 71 -1 O GLY A 70 N PHE A 67 SHEET 1 AA313 LEU D 133 LEU D 136 0 SHEET 2 AA313 THR D 150 THR D 161 -1 O THR D 160 N THR D 134 SHEET 3 AA313 ARG D 166 PHE D 177 -1 O CYS D 169 N LYS D 157 SHEET 4 AA313 TYR D 84 TYR D 92 -1 N HIS D 87 O ASN D 174 SHEET 5 AA313 PHE D 97 GLU D 107 -1 O VAL D 98 N LEU D 90 SHEET 6 AA313 HIS D 110 THR D 120 -1 O LYS D 112 N THR D 105 SHEET 7 AA313 THR D 6 PHE D 15 1 N SER D 14 O GLY D 119 SHEET 8 AA313 VAL D 18 ASN D 29 -1 O GLY D 26 N HIS D 7 SHEET 9 AA313 SER D 34 SER D 41 -1 O GLU D 36 N THR D 27 SHEET 10 AA313 GLU D 206 PHE D 216 -1 O PHE D 209 N LEU D 37 SHEET 11 AA313 MET D 191 GLN D 200 -1 N PHE D 194 O THR D 214 SHEET 12 AA313 SER D 139 ASN D 147 -1 N PHE D 143 O MET D 191 SHEET 13 AA313 THR D 150 THR D 161 -1 O LEU D 152 N VAL D 144 SHEET 1 AA4 2 PRO D 66 PHE D 67 0 SHEET 2 AA4 2 GLY D 70 MET D 71 -1 O GLY D 70 N PHE D 67 LINK C BLEU A 57 N1 BCR2 A 58 1555 1555 1.32 LINK C3 BCR2 A 58 N PHE A 61 1555 1555 1.30 LINK CD1BCR2 A 58 CE1BHIS A 195 1555 1555 1.56 LINK CE1BCR2 A 58 CE1BHIS A 195 1555 1555 1.14 LINK C BLEU D 57 N1 BCR2 D 58 1555 1555 1.33 LINK C3 BCR2 D 58 N PHE D 61 1555 1555 1.30 LINK CD1BCR2 D 58 CE1BHIS D 195 1555 1555 1.55 LINK CE1BCR2 D 58 ND1BHIS D 195 1555 1555 1.58 LINK CE1BCR2 D 58 CE1BHIS D 195 1555 1555 1.11 CISPEP 1 GLN A 189 PRO A 190 0 -10.37 CISPEP 2 GLN D 189 PRO D 190 0 -13.44 CRYST1 81.919 131.382 55.076 90.00 116.41 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012207 0.000000 0.006062 0.00000 SCALE2 0.000000 0.007611 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020272 0.00000