HEADER TRANSCRIPTION/DNA 12-SEP-18 6MG1 TITLE C-TERMINAL BZIP DOMAIN OF HUMAN C/EBPBETA WITH 16BP METHYLATED TITLE 2 OLIGONUCLEOTIDE CONTAINING CONSENSUS RECOGNITION SEQUENCE-C2 CRYSTAL TITLE 3 FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: CCAAT/ENHANCER-BINDING PROTEIN BETA; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: C/EBP BETA,LIVER ACTIVATOR PROTEIN,LAP,LIVER-ENRICHED COMPND 5 INHIBITORY PROTEIN,LIP,NUCLEAR FACTOR NF-IL6,TRANSCRIPTION FACTOR 5, COMPND 6 TCF-5; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: 16-BP METHYLATED OLIGONUCLEOTIDE; COMPND 10 CHAIN: C, D; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CEBPB, TCF5, PP9092; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS BZIP TRANSCIPTION FACTOR DNA METHYLATION CPA METHYLATION PROTEIN-DNA KEYWDS 2 COMPLEX, TRANSCRIPTION, TRANSCRIPTION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.R.HORTON,X.CHENG,J.YANG REVDAT 8 18-OCT-23 6MG1 1 REMARK REVDAT 7 26-OCT-22 6MG1 1 COMPND REMARK SEQRES REVDAT 6 01-JAN-20 6MG1 1 REMARK REVDAT 5 28-AUG-19 6MG1 1 REMARK REVDAT 4 29-MAY-19 6MG1 1 JRNL REVDAT 3 06-FEB-19 6MG1 1 SOURCE REVDAT 2 16-JAN-19 6MG1 1 JRNL REVDAT 1 12-DEC-18 6MG1 0 JRNL AUTH J.YANG,J.R.HORTON,D.WANG,R.REN,J.LI,D.SUN,Y.HUANG,X.ZHANG, JRNL AUTH 2 R.M.BLUMENTHAL,X.CHENG JRNL TITL STRUCTURAL BASIS FOR EFFECTS OF CPA MODIFICATIONS ON C/EBP JRNL TITL 2 BETA BINDING OF DNA. JRNL REF NUCLEIC ACIDS RES. V. 47 1774 2019 JRNL REFN ESSN 1362-4962 JRNL PMID 30566668 JRNL DOI 10.1093/NAR/GKY1264 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.14_3260: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.54 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.7 REMARK 3 NUMBER OF REFLECTIONS : 33208 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 1647 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.5491 - 4.0046 0.99 2866 154 0.1915 0.2156 REMARK 3 2 4.0046 - 3.1793 1.00 2854 146 0.1794 0.2362 REMARK 3 3 3.1793 - 2.7776 0.99 2834 148 0.2194 0.2734 REMARK 3 4 2.7776 - 2.5237 1.00 2795 146 0.2320 0.2383 REMARK 3 5 2.5237 - 2.3429 1.00 2868 150 0.2335 0.2648 REMARK 3 6 2.3429 - 2.2048 1.00 2813 147 0.2322 0.2606 REMARK 3 7 2.2048 - 2.0944 0.99 2812 146 0.2502 0.3339 REMARK 3 8 2.0944 - 2.0032 0.99 2777 145 0.2914 0.3026 REMARK 3 9 2.0032 - 1.9261 0.94 2679 135 0.2943 0.2770 REMARK 3 10 1.9261 - 1.8597 0.86 2412 125 0.2900 0.3604 REMARK 3 11 1.8597 - 1.8015 0.74 2111 111 0.3091 0.3225 REMARK 3 12 1.8015 - 1.7500 0.62 1740 94 0.3683 0.4453 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.880 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 1861 REMARK 3 ANGLE : 0.996 2627 REMARK 3 CHIRALITY : 0.044 290 REMARK 3 PLANARITY : 0.004 236 REMARK 3 DIHEDRAL : 29.056 752 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6MG1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1000236841. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : SEALED TUBE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-003 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : RIGAKU HYPIX-6000HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35611 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.630 REMARK 200 RESOLUTION RANGE LOW (A) : 34.542 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 80.8 REMARK 200 DATA REDUNDANCY : 10.30 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.63 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.51900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 2E42 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM CHLORIDE, 0.1 M BIS-TRIS REMARK 280 PH 6.5, 25% (W/V) POLYETHYLENE GLYCOL 3350, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 24.05500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.70250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 24.05500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 38.70250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 267 REMARK 465 MET A 268 REMARK 465 LEU A 339 REMARK 465 ALA A 340 REMARK 465 SER A 341 REMARK 465 SER A 342 REMARK 465 GLY A 343 REMARK 465 HIS A 344 REMARK 465 HIS B 267 REMARK 465 MET B 268 REMARK 465 LEU B 339 REMARK 465 ALA B 340 REMARK 465 SER B 341 REMARK 465 SER B 342 REMARK 465 GLY B 343 REMARK 465 HIS B 344 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 269 CG CD CE NZ REMARK 470 HIS A 270 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 273 CG CD OE1 OE2 REMARK 470 GLU A 279 CG CD OE1 OE2 REMARK 470 ASN A 329 CG OD1 ND2 REMARK 470 LEU A 330 CG CD1 CD2 REMARK 470 LYS A 332 CG CD CE NZ REMARK 470 GLN A 333 CG CD OE1 NE2 REMARK 470 LEU A 338 CG CD1 CD2 REMARK 470 LYS B 269 CG CD CE NZ REMARK 470 HIS B 270 CG ND1 CD2 CE1 NE2 REMARK 470 GLU B 273 CG CD OE1 OE2 REMARK 470 LEU B 327 CG CD1 CD2 REMARK 470 ARG B 328 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 329 CG OD1 ND2 REMARK 470 LEU B 330 CG CD1 CD2 REMARK 470 LYS B 332 CG CD CE NZ REMARK 470 GLN B 333 CG CD OE1 NE2 REMARK 470 LEU B 334 CG CD1 CD2 REMARK 470 GLU B 336 CG CD OE1 OE2 REMARK 470 LEU B 338 CG CD1 CD2 REMARK 470 DA C 16 C4' O4' C3' O3' C2' C1' N9 REMARK 470 DA C 16 C8 N7 C5 C6 N6 N1 C2 REMARK 470 DA C 16 N3 C4 REMARK 470 DA D 116 C5' C4' O4' C3' O3' C2' C1' REMARK 470 DA D 116 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA D 116 C2 N3 C4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 332 -64.79 -25.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PHE A 331 LYS A 332 -148.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide DG C 7 and 5CM C REMARK 800 8 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide 5CM C 8 and DG C REMARK 800 9 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide DG C 9 and 5CM C REMARK 800 10 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide 5CM C 10 and DA C REMARK 800 11 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide DG D 107 and 5CM REMARK 800 D 108 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide 5CM D 108 and DG REMARK 800 D 109 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide DG D 109 and 5CM REMARK 800 D 110 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide 5CM D 110 and DA REMARK 800 D 111 DBREF 6MG1 A 269 344 UNP P17676 CEBPB_HUMAN 246 321 DBREF 6MG1 B 269 344 UNP P17676 CEBPB_HUMAN 246 321 DBREF 6MG1 C 1 16 PDB 6MG1 6MG1 1 16 DBREF 6MG1 D 101 116 PDB 6MG1 6MG1 101 116 SEQADV 6MG1 HIS A 267 UNP P17676 EXPRESSION TAG SEQADV 6MG1 MET A 268 UNP P17676 EXPRESSION TAG SEQADV 6MG1 HIS B 267 UNP P17676 EXPRESSION TAG SEQADV 6MG1 MET B 268 UNP P17676 EXPRESSION TAG SEQRES 1 A 78 HIS MET LYS HIS SER ASP GLU TYR LYS ILE ARG ARG GLU SEQRES 2 A 78 ARG ASN ASN ILE ALA VAL ARG LYS SER ARG ASP LYS ALA SEQRES 3 A 78 LYS MET ARG ASN LEU GLU THR GLN HIS LYS VAL LEU GLU SEQRES 4 A 78 LEU THR ALA GLU ASN GLU ARG LEU GLN LYS LYS VAL GLU SEQRES 5 A 78 GLN LEU SER ARG GLU LEU SER THR LEU ARG ASN LEU PHE SEQRES 6 A 78 LYS GLN LEU PRO GLU PRO LEU LEU ALA SER SER GLY HIS SEQRES 1 B 78 HIS MET LYS HIS SER ASP GLU TYR LYS ILE ARG ARG GLU SEQRES 2 B 78 ARG ASN ASN ILE ALA VAL ARG LYS SER ARG ASP LYS ALA SEQRES 3 B 78 LYS MET ARG ASN LEU GLU THR GLN HIS LYS VAL LEU GLU SEQRES 4 B 78 LEU THR ALA GLU ASN GLU ARG LEU GLN LYS LYS VAL GLU SEQRES 5 B 78 GLN LEU SER ARG GLU LEU SER THR LEU ARG ASN LEU PHE SEQRES 6 B 78 LYS GLN LEU PRO GLU PRO LEU LEU ALA SER SER GLY HIS SEQRES 1 C 16 DT DA DT DA DT DT DG 5CM DG 5CM DA DA DT SEQRES 2 C 16 DA DT DA SEQRES 1 D 16 DT DA DT DA DT DT DG 5CM DG 5CM DA DA DT SEQRES 2 D 16 DA DT DA HET 5CM C 8 20 HET 5CM C 10 20 HET 5CM D 108 20 HET 5CM D 110 20 HET EDO C 101 4 HET EDO C 102 4 HET EDO D 401 4 HET EDO D 402 4 HET GOL D 403 6 HETNAM 5CM 5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 5CM 4(C10 H16 N3 O7 P) FORMUL 5 EDO 4(C2 H6 O2) FORMUL 9 GOL C3 H8 O3 FORMUL 10 HOH *132(H2 O) HELIX 1 AA1 SER A 271 LEU A 330 1 60 HELIX 2 AA2 SER B 271 PHE B 331 1 61 LINK O3' DG C 7 P 5CM C 8 1555 1555 1.60 LINK O3' 5CM C 8 P DG C 9 1555 1555 1.61 LINK O3' DG C 9 P 5CM C 10 1555 1555 1.60 LINK O3' 5CM C 10 P DA C 11 1555 1555 1.61 LINK O3' DG D 107 P 5CM D 108 1555 1555 1.61 LINK O3' 5CM D 108 P DG D 109 1555 1555 1.61 LINK O3' DG D 109 P 5CM D 110 1555 1555 1.61 LINK O3' 5CM D 110 P DA D 111 1555 1555 1.61 SITE 1 AC1 4 ASN A 281 DA C 11 DA C 12 HOH C 230 SITE 1 AC2 5 DT C 1 DA C 2 DA C 14 HOH C 205 SITE 2 AC2 5 DA D 102 SITE 1 AC3 5 DA C 2 DT D 101 DA D 102 DA D 114 SITE 2 AC3 5 HOH D 503 SITE 1 AC4 5 ARG B 277 ASN B 281 DA D 111 DA D 112 SITE 2 AC4 5 HOH D 526 SITE 1 AC5 4 DT C 15 DA C 16 DT D 115 DA D 116 SITE 1 AC6 14 ARG A 289 ARG B 289 DT C 6 DG C 9 SITE 2 AC6 14 HOH C 218 HOH C 220 HOH C 224 HOH C 225 SITE 3 AC6 14 HOH C 226 HOH C 227 5CM D 108 DG D 109 SITE 4 AC6 14 5CM D 110 DA D 111 SITE 1 AC7 14 ASN A 282 ARG A 286 ARG A 289 ARG B 289 SITE 2 AC7 14 DG C 7 5CM C 10 HOH C 216 HOH C 220 SITE 3 AC7 14 HOH C 221 HOH C 225 HOH C 227 DG D 107 SITE 4 AC7 14 5CM D 108 DG D 109 SITE 1 AC8 14 ARG A 278 ASN A 282 ARG A 286 ARG A 289 SITE 2 AC8 14 5CM C 8 DA C 11 HOH C 208 HOH C 212 SITE 3 AC8 14 HOH C 216 HOH C 221 DT D 106 DG D 107 SITE 4 AC8 14 5CM D 108 DG D 109 SITE 1 AC9 16 TYR A 274 ARG A 278 ASN A 281 ASN A 282 SITE 2 AC9 16 ARG A 289 DG C 9 DA C 12 EDO C 101 SITE 3 AC9 16 HOH C 208 HOH C 212 HOH C 216 HOH C 219 SITE 4 AC9 16 HOH C 223 DT D 105 DT D 106 DG D 107 SITE 1 AD1 14 ARG A 289 ARG B 289 LYS B 293 5CM C 8 SITE 2 AD1 14 DG C 9 5CM C 10 DA C 11 DT D 106 SITE 3 AD1 14 DG D 109 HOH D 514 HOH D 515 HOH D 527 SITE 4 AD1 14 HOH D 529 HOH D 530 SITE 1 AD2 16 ARG A 289 ASN B 282 ARG B 286 ARG B 289 SITE 2 AD2 16 DG C 7 5CM C 8 DG C 9 DG D 107 SITE 3 AD2 16 5CM D 110 HOH D 509 HOH D 515 HOH D 520 SITE 4 AD2 16 HOH D 527 HOH D 528 HOH D 529 HOH D 531 SITE 1 AD3 16 ARG B 278 ASN B 282 ARG B 286 ARG B 289 SITE 2 AD3 16 DT C 6 DG C 7 5CM C 8 DG C 9 SITE 3 AD3 16 5CM D 108 DA D 111 HOH D 502 HOH D 509 SITE 4 AD3 16 HOH D 513 HOH D 520 HOH D 528 HOH D 531 SITE 1 AD4 15 TYR B 274 ARG B 278 ASN B 281 ASN B 282 SITE 2 AD4 15 ARG B 289 DT C 5 DT C 6 DG C 7 SITE 3 AD4 15 DG D 109 DA D 112 EDO D 402 HOH D 502 SITE 4 AD4 15 HOH D 513 HOH D 523 HOH D 524 CRYST1 48.110 77.405 99.825 90.00 103.90 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020786 0.000000 0.005145 0.00000 SCALE2 0.000000 0.012919 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010320 0.00000