HEADER TRANSCRIPTION/DNA 12-SEP-18 6MG3 TITLE V285A MUTANT OF THE C-TERMINAL BZIP DOMAIN OF HUMAN C/EBPBETA WITH TITLE 2 16BP METHYLATED OLIGONUCLEOTIDE CONTAINING CONSENSUS RECOGNITION TITLE 3 SEQUENCE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CCAAT/ENHANCER-BINDING PROTEIN BETA; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: C/EBP BETA,LIVER ACTIVATOR PROTEIN,LAP,LIVER-ENRICHED COMPND 5 INHIBITORY PROTEIN,LIP,NUCLEAR FACTOR NF-IL6,TRANSCRIPTION FACTOR 5, COMPND 6 TCF-5; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: 16-BP METHYLATED OLIGONUCLEOTIDE; COMPND 11 CHAIN: C, D; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CEBPB, TCF5, PP9092; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS BZIP TRANSCIPTION FACTOR DNA METHYLATION CPA METHYLATION PROTEIN-DNA KEYWDS 2 COMPLEX, TRANSCRIPTION, TRANSCRIPTION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.R.HORTON,X.CHENG,J.YANG REVDAT 7 11-OCT-23 6MG3 1 REMARK REVDAT 6 01-JAN-20 6MG3 1 REMARK REVDAT 5 28-AUG-19 6MG3 1 JRNL REMARK REVDAT 4 30-JAN-19 6MG3 1 REMARK REVDAT 3 16-JAN-19 6MG3 1 JRNL REVDAT 2 19-DEC-18 6MG3 1 REMARK REVDAT 1 12-DEC-18 6MG3 0 JRNL AUTH J.YANG,J.R.HORTON,D.WANG,R.REN,J.LI,D.SUN,Y.HUANG,X.ZHANG, JRNL AUTH 2 R.M.BLUMENTHAL,X.CHENG JRNL TITL STRUCTURAL BASIS FOR EFFECTS OF CPA MODIFICATIONS ON C/EBP JRNL TITL 2 BETA BINDING OF DNA. JRNL REF NUCLEIC ACIDS RES. V. 47 1774 2019 JRNL REFN ESSN 1362-4962 JRNL PMID 30566668 JRNL DOI 10.1093/NAR/GKY1264 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 27768 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.460 REMARK 3 FREE R VALUE TEST SET COUNT : 1238 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.7366 - 4.2591 1.00 3083 145 0.1781 0.1975 REMARK 3 2 4.2591 - 3.3827 1.00 2981 139 0.1938 0.2371 REMARK 3 3 3.3827 - 2.9557 0.99 2949 138 0.2312 0.2692 REMARK 3 4 2.9557 - 2.6858 1.00 2926 136 0.2422 0.2417 REMARK 3 5 2.6858 - 2.4934 1.00 2931 137 0.2371 0.3082 REMARK 3 6 2.4934 - 2.3465 1.00 2932 137 0.2472 0.2468 REMARK 3 7 2.3465 - 2.2291 1.00 2901 136 0.2727 0.2865 REMARK 3 8 2.2291 - 2.1321 1.00 2913 136 0.2945 0.3281 REMARK 3 9 2.1321 - 2.0500 1.00 2914 134 0.3205 0.3141 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.610 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 1947 REMARK 3 ANGLE : 0.651 2769 REMARK 3 CHIRALITY : 0.027 301 REMARK 3 PLANARITY : 0.002 236 REMARK 3 DIHEDRAL : 24.408 1064 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 269 THROUGH 332 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.0403 53.7085 33.4318 REMARK 3 T TENSOR REMARK 3 T11: 0.2261 T22: 0.2558 REMARK 3 T33: 0.2077 T12: 0.0248 REMARK 3 T13: 0.0253 T23: -0.0045 REMARK 3 L TENSOR REMARK 3 L11: 0.7031 L22: 8.3859 REMARK 3 L33: 2.9286 L12: -1.6578 REMARK 3 L13: 1.0878 L23: -4.8797 REMARK 3 S TENSOR REMARK 3 S11: -0.1697 S12: -0.1995 S13: -0.0789 REMARK 3 S21: 0.3481 S22: 0.5235 S23: 0.4591 REMARK 3 S31: -0.1436 S32: -0.2491 S33: -0.4092 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 269 THROUGH 336 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6496 53.2534 25.0134 REMARK 3 T TENSOR REMARK 3 T11: 0.2509 T22: 0.2617 REMARK 3 T33: 0.2101 T12: 0.0127 REMARK 3 T13: 0.0151 T23: -0.0124 REMARK 3 L TENSOR REMARK 3 L11: 0.5324 L22: 7.9160 REMARK 3 L33: 0.5736 L12: 1.2141 REMARK 3 L13: 0.0104 L23: -0.5358 REMARK 3 S TENSOR REMARK 3 S11: 0.1075 S12: 0.0179 S13: -0.0266 REMARK 3 S21: 0.1968 S22: -0.1536 S23: -0.0089 REMARK 3 S31: -0.0295 S32: -0.0344 S33: 0.0837 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.5374 28.3994 35.9437 REMARK 3 T TENSOR REMARK 3 T11: 0.2300 T22: 0.3563 REMARK 3 T33: 0.2459 T12: 0.0531 REMARK 3 T13: 0.0291 T23: -0.0519 REMARK 3 L TENSOR REMARK 3 L11: 1.0606 L22: 2.4663 REMARK 3 L33: 2.2588 L12: 0.7488 REMARK 3 L13: 1.1178 L23: 0.0487 REMARK 3 S TENSOR REMARK 3 S11: -0.1499 S12: 0.4582 S13: -0.3916 REMARK 3 S21: -0.0287 S22: 0.1246 S23: -0.1066 REMARK 3 S31: 0.2016 S32: 0.4646 S33: 0.0449 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 101 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.8923 28.6667 36.9895 REMARK 3 T TENSOR REMARK 3 T11: 0.2832 T22: 0.3569 REMARK 3 T33: 0.2109 T12: -0.0002 REMARK 3 T13: 0.0492 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 7.9185 L22: 1.5607 REMARK 3 L33: 3.4885 L12: 2.6694 REMARK 3 L13: 3.3950 L23: 0.7794 REMARK 3 S TENSOR REMARK 3 S11: -0.3038 S12: 0.4195 S13: -0.0551 REMARK 3 S21: -0.1076 S22: 0.2564 S23: -0.1471 REMARK 3 S31: 0.2634 S32: 0.3600 S33: 0.0618 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6MG3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1000236853. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : SEALED TUBE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-003 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54218 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : RIGAKU HYPIX-6000HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSALISPRO REMARK 200 DATA SCALING SOFTWARE : CRYSALISPRO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28807 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 26.734 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.200 REMARK 200 R MERGE (I) : 0.17200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 2E42 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE TRIHYDRATE PH REMARK 280 7.0, 12% (W/V) POLYETHYLENE GLYCOL 3350, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.72200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 37.72200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 50.71500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 57.02100 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 50.71500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 57.02100 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 37.72200 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 50.71500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 57.02100 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 37.72200 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 50.71500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 57.02100 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 267 REMARK 465 MET A 268 REMARK 465 GLN A 333 REMARK 465 LEU A 334 REMARK 465 PRO A 335 REMARK 465 GLU A 336 REMARK 465 PRO A 337 REMARK 465 LEU A 338 REMARK 465 LEU A 339 REMARK 465 ALA A 340 REMARK 465 SER A 341 REMARK 465 SER A 342 REMARK 465 GLY A 343 REMARK 465 HIS A 344 REMARK 465 HIS B 267 REMARK 465 MET B 268 REMARK 465 PRO B 337 REMARK 465 LEU B 338 REMARK 465 LEU B 339 REMARK 465 ALA B 340 REMARK 465 SER B 341 REMARK 465 SER B 342 REMARK 465 GLY B 343 REMARK 465 HIS B 344 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 269 CG CD CE NZ REMARK 470 GLU A 273 CG CD OE1 OE2 REMARK 470 LYS A 275 CG CD CE NZ REMARK 470 ARG A 277 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 269 CG CD CE NZ REMARK 470 GLU B 273 CG CD OE1 OE2 REMARK 470 LYS B 275 CG CD CE NZ REMARK 470 GLU B 336 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER B 271 -161.10 -108.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 474 DISTANCE = 9.19 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 401 DBREF 6MG3 A 269 344 UNP P17676 CEBPB_HUMAN 246 321 DBREF 6MG3 B 269 344 UNP P17676 CEBPB_HUMAN 246 321 DBREF 6MG3 C 1 16 PDB 6MG3 6MG3 1 16 DBREF 6MG3 D 101 116 PDB 6MG3 6MG3 101 116 SEQADV 6MG3 HIS A 267 UNP P17676 EXPRESSION TAG SEQADV 6MG3 MET A 268 UNP P17676 EXPRESSION TAG SEQADV 6MG3 ALA A 285 UNP P17676 VAL 262 ENGINEERED MUTATION SEQADV 6MG3 HIS B 267 UNP P17676 EXPRESSION TAG SEQADV 6MG3 MET B 268 UNP P17676 EXPRESSION TAG SEQADV 6MG3 ALA B 285 UNP P17676 VAL 262 ENGINEERED MUTATION SEQRES 1 A 78 HIS MET LYS HIS SER ASP GLU TYR LYS ILE ARG ARG GLU SEQRES 2 A 78 ARG ASN ASN ILE ALA ALA ARG LYS SER ARG ASP LYS ALA SEQRES 3 A 78 LYS MET ARG ASN LEU GLU THR GLN HIS LYS VAL LEU GLU SEQRES 4 A 78 LEU THR ALA GLU ASN GLU ARG LEU GLN LYS LYS VAL GLU SEQRES 5 A 78 GLN LEU SER ARG GLU LEU SER THR LEU ARG ASN LEU PHE SEQRES 6 A 78 LYS GLN LEU PRO GLU PRO LEU LEU ALA SER SER GLY HIS SEQRES 1 B 78 HIS MET LYS HIS SER ASP GLU TYR LYS ILE ARG ARG GLU SEQRES 2 B 78 ARG ASN ASN ILE ALA ALA ARG LYS SER ARG ASP LYS ALA SEQRES 3 B 78 LYS MET ARG ASN LEU GLU THR GLN HIS LYS VAL LEU GLU SEQRES 4 B 78 LEU THR ALA GLU ASN GLU ARG LEU GLN LYS LYS VAL GLU SEQRES 5 B 78 GLN LEU SER ARG GLU LEU SER THR LEU ARG ASN LEU PHE SEQRES 6 B 78 LYS GLN LEU PRO GLU PRO LEU LEU ALA SER SER GLY HIS SEQRES 1 C 16 DT DA DT DA DT DT DG 5CM DG 5CM DA DA DT SEQRES 2 C 16 DA DT DA SEQRES 1 D 16 DT DA DT DA DT DT DG 5CM DG 5CM DA DA DT SEQRES 2 D 16 DA DT DA HET 5CM C 8 20 HET 5CM C 10 20 HET 5CM D 108 40 HET 5CM D 110 20 HET EDO C 401 4 HETNAM 5CM 5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 5CM 4(C10 H16 N3 O7 P) FORMUL 5 EDO C2 H6 O2 FORMUL 6 HOH *250(H2 O) HELIX 1 AA1 SER A 271 ASN A 329 1 59 HELIX 2 AA2 SER B 271 GLN B 333 1 63 LINK O3' DG C 7 P 5CM C 8 1555 1555 1.61 LINK O3' 5CM C 8 P DG C 9 1555 1555 1.61 LINK O3' DG C 9 P 5CM C 10 1555 1555 1.61 LINK O3' 5CM C 10 P DA C 11 1555 1555 1.61 LINK O3'A DG D 107 P A5CM D 108 1555 1555 1.61 LINK O3'B DG D 107 P B5CM D 108 1555 1555 1.61 LINK O3'A5CM D 108 P A DG D 109 1555 1555 1.61 LINK O3'B5CM D 108 P B DG D 109 1555 1555 1.61 LINK O3'A DG D 109 P 5CM D 110 1555 1555 1.61 LINK O3'B DG D 109 P 5CM D 110 1555 1555 1.61 LINK O3' 5CM D 110 P DA D 111 1555 1555 1.61 SITE 1 AC1 4 DG C 9 5CM C 10 DG D 109 5CM D 110 CRYST1 101.430 114.042 75.444 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009859 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008769 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013255 0.00000