data_6O8J # _entry.id 6O8J # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6O8J pdb_00006o8j 10.2210/pdb6o8j/pdb WWPDB D_1000240194 ? ? BMRB 30586 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details Syn-safencin _pdbx_database_related.db_id 30586 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6O8J _pdbx_database_status.recvd_initial_deposition_date 2019-03-11 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Fields, F.R.' 1 0000-0002-9029-5150 'Lee, S.W.' 2 0000-0001-9305-2050 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acs Pharmacol Transl Sci' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2575-910 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 3 _citation.language ? _citation.page_first 418 _citation.page_last 424 _citation.title 'Synthetic Antimicrobial Peptide Tuning Permits Membrane Disruption and Interpeptide Synergy.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acsptsci.0c00001 _citation.pdbx_database_id_PubMed 32566907 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fields, F.R.' 1 ? primary 'Manzo, G.' 2 ? primary 'Hind, C.K.' 3 ? primary 'Janardhanan, J.' 4 ? primary 'Foik, I.P.' 5 ? primary 'Carmo Silva, P.D.' 6 ? primary 'Balsara, R.D.' 7 ? primary 'Clifford, M.' 8 ? primary 'Vu, H.M.' 9 ? primary 'Ross, J.N.' 10 ? primary 'Kalwajtys, V.R.' 11 ? primary 'Gonzalez, A.J.' 12 ? primary 'Bui, T.T.' 13 ? primary 'Ploplis, V.A.' 14 ? primary 'Castellino, F.J.' 15 ? primary 'Siryaporn, A.' 16 ? primary 'Chang, M.' 17 ? primary 'Sutton, J.M.' 18 ? primary 'Mason, A.J.' 19 ? primary 'Lee, S.' 20 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6O8J _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.000 _cell.length_a_esd ? _cell.length_b 1.000 _cell.length_b_esd ? _cell.length_c 1.000 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6O8J _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'Circular bacteriocin, circularin A/uberolysin family' _entity.formula_weight 2937.527 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code AGKETIRQYLKNEIKKKGRKAVIAW _entity_poly.pdbx_seq_one_letter_code_can AGKETIRQYLKNEIKKKGRKAVIAW _entity_poly.pdbx_strand_id X _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 GLY n 1 3 LYS n 1 4 GLU n 1 5 THR n 1 6 ILE n 1 7 ARG n 1 8 GLN n 1 9 TYR n 1 10 LEU n 1 11 LYS n 1 12 ASN n 1 13 GLU n 1 14 ILE n 1 15 LYS n 1 16 LYS n 1 17 LYS n 1 18 GLY n 1 19 ARG n 1 20 LYS n 1 21 ALA n 1 22 VAL n 1 23 ILE n 1 24 ALA n 1 25 TRP n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 25 _pdbx_entity_src_syn.organism_scientific 'Bacillus safensis' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 561879 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6O8J _struct_ref.pdbx_db_accession 6O8J _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6O8J _struct_ref_seq.pdbx_strand_id X _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 25 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6O8J _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 25 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 25 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H TOCSY' 1 isotropic 4 1 1 '2D 1H-1H NOESY' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7 _pdbx_nmr_exptl_sample_conditions.ionic_strength NA _pdbx_nmr_exptl_sample_conditions.details '5mM SDS micelles' _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.label 'SDS micelles' _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '500 uM 1H Syn-safencin, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label 1H _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 500 _pdbx_nmr_spectrometer.details ? # _pdbx_nmr_refine.entry_id 6O8J _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 6O8J _pdbx_nmr_ensemble.conformers_calculated_total_number 1000 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6O8J _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 2 'structure calculation' NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 3 'chemical shift assignment' NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 4 'peak picking' NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6O8J _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6O8J _struct.title Syn-safencin _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6O8J _struct_keywords.text 'antimicrobial, synthetic peptide, ANTIMICROBIAL PROTEIN' _struct_keywords.pdbx_keywords 'ANTIMICROBIAL PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id ARG _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 19 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ALA _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 24 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ARG _struct_conf.beg_auth_asym_id X _struct_conf.beg_auth_seq_id 19 _struct_conf.end_auth_comp_id ALA _struct_conf.end_auth_asym_id X _struct_conf.end_auth_seq_id 24 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 6O8J _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA X . n A 1 2 GLY 2 2 2 GLY GLY X . n A 1 3 LYS 3 3 3 LYS LYS X . n A 1 4 GLU 4 4 4 GLU GLU X . n A 1 5 THR 5 5 5 THR THR X . n A 1 6 ILE 6 6 6 ILE ILE X . n A 1 7 ARG 7 7 7 ARG ARG X . n A 1 8 GLN 8 8 8 GLN GLN X . n A 1 9 TYR 9 9 9 TYR TYR X . n A 1 10 LEU 10 10 10 LEU LEU X . n A 1 11 LYS 11 11 11 LYS LYS X . n A 1 12 ASN 12 12 12 ASN ASN X . n A 1 13 GLU 13 13 13 GLU GLU X . n A 1 14 ILE 14 14 14 ILE ILE X . n A 1 15 LYS 15 15 15 LYS LYS X . n A 1 16 LYS 16 16 16 LYS LYS X . n A 1 17 LYS 17 17 17 LYS LYS X . n A 1 18 GLY 18 18 18 GLY GLY X . n A 1 19 ARG 19 19 19 ARG ARG X . n A 1 20 LYS 20 20 20 LYS LYS X . n A 1 21 ALA 21 21 21 ALA ALA X . n A 1 22 VAL 22 22 22 VAL VAL X . n A 1 23 ILE 23 23 23 ILE ILE X . n A 1 24 ALA 24 24 24 ALA ALA X . n A 1 25 TRP 25 25 25 TRP TRP X . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-04-15 2 'Structure model' 1 1 2020-07-08 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 3 'Structure model' '_database_2.pdbx_DOI' 13 3 'Structure model' '_database_2.pdbx_database_accession' 14 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component Syn-safencin _pdbx_nmr_exptl_sample.concentration 500 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units uM _pdbx_nmr_exptl_sample.isotopic_labeling 1H # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O X LYS 20 ? ? H X VAL 22 ? ? 0.91 2 1 H X ILE 6 ? ? H X ARG 7 ? ? 1.07 3 1 C X LYS 20 ? ? H X VAL 22 ? ? 1.07 4 1 O X LYS 11 ? ? H X LYS 15 ? ? 1.15 5 1 O X ILE 14 ? ? H X LYS 17 ? ? 1.40 6 1 O X LYS 15 ? ? H X ARG 19 ? ? 1.42 7 1 O X LYS 20 ? ? N X VAL 22 ? ? 1.70 8 1 O X LYS 15 ? ? N X ARG 19 ? ? 2.06 9 1 C X LYS 20 ? ? N X VAL 22 ? ? 2.11 10 1 O X ILE 14 ? ? N X LYS 17 ? ? 2.12 11 1 O X LYS 11 ? ? N X LYS 15 ? ? 2.17 12 2 O X LYS 20 ? ? H X VAL 22 ? ? 0.93 13 2 C X LYS 20 ? ? H X VAL 22 ? ? 1.05 14 2 H X ILE 6 ? ? H X ARG 7 ? ? 1.06 15 2 O X LYS 11 ? ? H X LYS 15 ? ? 1.17 16 2 H X GLN 8 ? ? H X TYR 9 ? ? 1.29 17 2 O X LYS 15 ? ? H X ARG 19 ? ? 1.44 18 2 O X ILE 14 ? ? H X LYS 17 ? ? 1.45 19 2 O X LYS 11 ? ? H X ILE 14 ? ? 1.58 20 2 O X LYS 20 ? ? N X VAL 22 ? ? 1.69 21 2 O X LYS 15 ? ? N X ARG 19 ? ? 2.05 22 2 C X LYS 20 ? ? N X VAL 22 ? ? 2.09 23 2 O X ILE 14 ? ? N X LYS 17 ? ? 2.13 24 2 O X LYS 11 ? ? N X LYS 15 ? ? 2.18 25 3 O X LYS 20 ? ? H X VAL 22 ? ? 0.92 26 3 H X ILE 6 ? ? H X ARG 7 ? ? 0.99 27 3 C X LYS 20 ? ? H X VAL 22 ? ? 1.07 28 3 O X LYS 11 ? ? H X LYS 15 ? ? 1.16 29 3 O X LYS 15 ? ? H X ARG 19 ? ? 1.25 30 3 O X ILE 14 ? ? H X LYS 17 ? ? 1.50 31 3 O X ARG 19 ? ? H X ILE 23 ? ? 1.50 32 3 O X LYS 20 ? ? N X VAL 22 ? ? 1.70 33 3 O X LYS 15 ? ? N X ARG 19 ? ? 1.96 34 3 O X ILE 14 ? ? N X LYS 17 ? ? 2.08 35 3 C X LYS 20 ? ? N X VAL 22 ? ? 2.10 36 3 O X LYS 11 ? ? N X LYS 15 ? ? 2.17 37 4 O X LYS 20 ? ? H X VAL 22 ? ? 0.92 38 4 H X ILE 6 ? ? H X ARG 7 ? ? 0.99 39 4 C X LYS 20 ? ? H X VAL 22 ? ? 1.07 40 4 O X LYS 11 ? ? H X LYS 15 ? ? 1.16 41 4 O X LYS 15 ? ? H X ARG 19 ? ? 1.43 42 4 O X ILE 14 ? ? H X LYS 17 ? ? 1.43 43 4 O X LYS 11 ? ? H X ILE 14 ? ? 1.58 44 4 O X LYS 20 ? ? N X VAL 22 ? ? 1.70 45 4 O X LYS 15 ? ? N X ARG 19 ? ? 2.05 46 4 C X LYS 20 ? ? N X VAL 22 ? ? 2.10 47 4 O X ILE 14 ? ? N X LYS 17 ? ? 2.13 48 4 O X LYS 11 ? ? N X LYS 15 ? ? 2.17 49 5 O X LYS 20 ? ? H X VAL 22 ? ? 0.94 50 5 C X LYS 20 ? ? H X VAL 22 ? ? 1.02 51 5 H X ILE 6 ? ? H X ARG 7 ? ? 1.05 52 5 O X LYS 11 ? ? H X LYS 15 ? ? 1.18 53 5 H X GLN 8 ? ? H X TYR 9 ? ? 1.28 54 5 O X LYS 15 ? ? H X ARG 19 ? ? 1.39 55 5 O X ILE 14 ? ? H X LYS 17 ? ? 1.46 56 5 O X LYS 20 ? ? N X VAL 22 ? ? 1.72 57 5 C X LYS 20 ? ? N X VAL 22 ? ? 2.08 58 5 O X LYS 15 ? ? N X ARG 19 ? ? 2.13 59 5 O X ILE 14 ? ? N X LYS 17 ? ? 2.18 60 5 O X LYS 11 ? ? N X LYS 15 ? ? 2.18 61 6 O X LYS 20 ? ? H X VAL 22 ? ? 0.88 62 6 H X ILE 6 ? ? H X ARG 7 ? ? 1.04 63 6 C X LYS 20 ? ? H X VAL 22 ? ? 1.07 64 6 H X GLY 2 ? ? H X LYS 3 ? ? 1.35 65 6 O X LYS 15 ? ? H X ARG 19 ? ? 1.39 66 6 O X ILE 14 ? ? H X LYS 17 ? ? 1.41 67 6 O X LYS 20 ? ? N X VAL 22 ? ? 1.68 68 6 O X LYS 15 ? ? N X ARG 19 ? ? 2.08 69 6 O X ILE 14 ? ? N X LYS 17 ? ? 2.10 70 6 C X LYS 20 ? ? N X VAL 22 ? ? 2.11 71 7 O X LYS 20 ? ? H X VAL 22 ? ? 0.91 72 7 H X ILE 6 ? ? H X ARG 7 ? ? 1.00 73 7 C X LYS 20 ? ? H X VAL 22 ? ? 1.07 74 7 O X LYS 11 ? ? H X LYS 15 ? ? 1.15 75 7 O X LYS 15 ? ? H X ARG 19 ? ? 1.41 76 7 O X ILE 14 ? ? H X LYS 17 ? ? 1.43 77 7 O X LYS 20 ? ? N X VAL 22 ? ? 1.70 78 7 O X LYS 15 ? ? N X ARG 19 ? ? 2.08 79 7 C X LYS 20 ? ? N X VAL 22 ? ? 2.11 80 7 O X ILE 14 ? ? N X LYS 17 ? ? 2.14 81 7 O X LYS 11 ? ? N X LYS 15 ? ? 2.17 82 8 O X LYS 20 ? ? H X VAL 22 ? ? 0.97 83 8 H X ILE 6 ? ? H X ARG 7 ? ? 0.99 84 8 C X LYS 20 ? ? H X VAL 22 ? ? 1.05 85 8 O X LYS 11 ? ? H X LYS 15 ? ? 1.17 86 8 O X GLY 2 ? ? H X THR 5 ? ? 1.38 87 8 O X LYS 15 ? ? H X ARG 19 ? ? 1.43 88 8 O X ILE 14 ? ? H X LYS 17 ? ? 1.45 89 8 O X ALA 1 ? ? H X GLU 4 ? ? 1.56 90 8 O X LYS 11 ? ? H X ILE 14 ? ? 1.60 91 8 O X LYS 20 ? ? N X VAL 22 ? ? 1.73 92 8 O X LYS 15 ? ? N X ARG 19 ? ? 2.05 93 8 C X LYS 20 ? ? N X VAL 22 ? ? 2.09 94 8 O X ILE 14 ? ? N X LYS 17 ? ? 2.14 95 8 O X LYS 11 ? ? N X LYS 15 ? ? 2.18 96 9 O X LYS 20 ? ? H X VAL 22 ? ? 0.95 97 9 H X ILE 6 ? ? H X ARG 7 ? ? 1.00 98 9 C X LYS 20 ? ? H X VAL 22 ? ? 1.02 99 9 O X LYS 15 ? ? H X ARG 19 ? ? 1.31 100 9 O X ILE 14 ? ? H X LYS 17 ? ? 1.40 101 9 O X LYS 20 ? ? N X VAL 22 ? ? 1.74 102 9 C X LYS 20 ? ? N X VAL 22 ? ? 2.09 103 9 O X ILE 14 ? ? N X LYS 17 ? ? 2.15 104 9 O X LYS 15 ? ? N X ARG 19 ? ? 2.15 105 10 O X LYS 20 ? ? H X VAL 22 ? ? 0.93 106 10 H X ILE 6 ? ? H X ARG 7 ? ? 0.97 107 10 C X LYS 20 ? ? H X VAL 22 ? ? 1.07 108 10 O X LYS 11 ? ? H X LYS 15 ? ? 1.17 109 10 O X LYS 15 ? ? H X ARG 19 ? ? 1.41 110 10 O X ILE 14 ? ? H X LYS 17 ? ? 1.42 111 10 O X LYS 11 ? ? H X ILE 14 ? ? 1.56 112 10 O X LYS 20 ? ? N X VAL 22 ? ? 1.72 113 10 O X LYS 15 ? ? N X ARG 19 ? ? 2.06 114 10 C X LYS 20 ? ? N X VAL 22 ? ? 2.11 115 10 O X ILE 14 ? ? N X LYS 17 ? ? 2.13 116 10 O X LYS 11 ? ? N X LYS 15 ? ? 2.18 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 8 _pdbx_validate_rmsd_bond.auth_atom_id_1 CA _pdbx_validate_rmsd_bond.auth_asym_id_1 X _pdbx_validate_rmsd_bond.auth_comp_id_1 GLY _pdbx_validate_rmsd_bond.auth_seq_id_1 2 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 C _pdbx_validate_rmsd_bond.auth_asym_id_2 X _pdbx_validate_rmsd_bond.auth_comp_id_2 GLY _pdbx_validate_rmsd_bond.auth_seq_id_2 2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.416 _pdbx_validate_rmsd_bond.bond_target_value 1.514 _pdbx_validate_rmsd_bond.bond_deviation -0.098 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.016 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N X LYS 20 ? ? CA X LYS 20 ? ? CB X LYS 20 ? ? 122.51 110.60 11.91 1.80 N 2 3 N X LYS 20 ? ? CA X LYS 20 ? ? CB X LYS 20 ? ? 122.74 110.60 12.14 1.80 N 3 4 N X LYS 20 ? ? CA X LYS 20 ? ? CB X LYS 20 ? ? 122.02 110.60 11.42 1.80 N 4 6 N X LYS 20 ? ? CA X LYS 20 ? ? CB X LYS 20 ? ? 121.65 110.60 11.05 1.80 N 5 8 N X LYS 20 ? ? CA X LYS 20 ? ? CB X LYS 20 ? ? 122.00 110.60 11.40 1.80 N 6 10 N X LYS 20 ? ? CA X LYS 20 ? ? CB X LYS 20 ? ? 122.94 110.60 12.34 1.80 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR X 5 ? ? 18.53 74.34 2 1 ILE X 6 ? ? 150.59 2.16 3 1 GLN X 8 ? ? 140.03 -0.30 4 1 ASN X 12 ? ? 49.94 12.22 5 1 GLU X 13 ? ? 74.26 -2.60 6 1 LYS X 17 ? ? 88.31 20.89 7 1 ARG X 19 ? ? 54.04 19.05 8 1 ALA X 21 ? ? -45.89 22.62 9 1 VAL X 22 ? ? 169.72 -32.61 10 1 ILE X 23 ? ? -64.66 1.26 11 1 ALA X 24 ? ? 153.08 40.15 12 2 THR X 5 ? ? 18.17 73.98 13 2 ILE X 6 ? ? 149.53 2.63 14 2 GLN X 8 ? ? 137.05 10.77 15 2 ASN X 12 ? ? 49.56 10.81 16 2 GLU X 13 ? ? 74.98 -0.33 17 2 LYS X 17 ? ? 81.77 26.37 18 2 ARG X 19 ? ? 50.27 19.21 19 2 ALA X 21 ? ? -45.65 21.22 20 2 VAL X 22 ? ? 179.82 -39.56 21 2 ILE X 23 ? ? -62.05 1.30 22 2 ALA X 24 ? ? 151.25 46.17 23 3 THR X 5 ? ? 17.33 67.05 24 3 ILE X 6 ? ? 163.81 2.87 25 3 ARG X 7 ? ? -67.33 18.84 26 3 ASN X 12 ? ? 50.42 9.85 27 3 GLU X 13 ? ? 74.74 -2.80 28 3 ALA X 21 ? ? -46.87 22.93 29 3 VAL X 22 ? ? 178.56 -36.94 30 3 ILE X 23 ? ? -63.92 0.59 31 3 ALA X 24 ? ? 152.95 45.34 32 4 THR X 5 ? ? 17.06 65.61 33 4 ILE X 6 ? ? 168.99 0.03 34 4 GLN X 8 ? ? 124.20 11.87 35 4 ASN X 12 ? ? 49.64 10.70 36 4 GLU X 13 ? ? 75.12 -1.22 37 4 LYS X 17 ? ? 86.48 22.23 38 4 ARG X 19 ? ? 52.46 19.16 39 4 ALA X 21 ? ? -45.87 22.43 40 4 VAL X 22 ? ? 171.26 -34.49 41 4 ILE X 23 ? ? -62.76 0.58 42 4 ALA X 24 ? ? 149.66 43.98 43 5 THR X 5 ? ? 17.66 74.06 44 5 ILE X 6 ? ? 148.45 2.69 45 5 GLN X 8 ? ? 144.76 7.60 46 5 ASN X 12 ? ? 47.84 13.18 47 5 GLU X 13 ? ? 75.41 -3.92 48 5 LYS X 17 ? ? 81.67 27.50 49 5 ALA X 21 ? ? -46.86 22.50 50 5 VAL X 22 ? ? 166.61 -31.64 51 5 ALA X 24 ? ? 153.47 40.72 52 6 THR X 5 ? ? 24.46 71.77 53 6 ILE X 6 ? ? 170.75 -6.57 54 6 ARG X 7 ? ? -92.41 48.59 55 6 LYS X 11 ? ? -120.29 -53.11 56 6 ASN X 12 ? ? 102.69 16.94 57 6 ILE X 14 ? ? -146.91 -17.40 58 6 LYS X 17 ? ? 80.79 26.36 59 6 ARG X 19 ? ? 53.46 19.46 60 6 ALA X 21 ? ? -44.90 22.37 61 6 VAL X 22 ? ? 174.99 -38.53 62 6 ILE X 23 ? ? -61.94 2.21 63 6 ALA X 24 ? ? 150.14 44.32 64 7 THR X 5 ? ? 21.43 62.84 65 7 ILE X 6 ? ? 175.43 2.09 66 7 ARG X 7 ? ? -74.31 29.26 67 7 ASN X 12 ? ? 50.76 11.07 68 7 GLU X 13 ? ? 75.36 -4.12 69 7 LYS X 17 ? ? 87.08 21.63 70 7 ARG X 19 ? ? 54.95 19.46 71 7 ALA X 21 ? ? -44.47 20.90 72 7 VAL X 22 ? ? 175.72 -35.92 73 7 ILE X 23 ? ? -63.53 1.42 74 7 ALA X 24 ? ? 151.34 45.32 75 8 THR X 5 ? ? 24.54 68.36 76 8 ILE X 6 ? ? 168.23 0.19 77 8 ARG X 7 ? ? -82.15 33.54 78 8 ASN X 12 ? ? 52.27 9.41 79 8 LYS X 17 ? ? 84.73 24.40 80 8 ARG X 19 ? ? 51.10 19.85 81 8 ALA X 21 ? ? -46.98 21.59 82 8 VAL X 22 ? ? 171.46 -31.18 83 8 ALA X 24 ? ? 144.28 48.82 84 9 THR X 5 ? ? 19.98 62.47 85 9 ILE X 6 ? ? 175.24 2.66 86 9 ARG X 7 ? ? -76.37 31.55 87 9 ASN X 12 ? ? 98.14 14.77 88 9 ILE X 14 ? ? -148.00 -20.33 89 9 LYS X 17 ? ? 86.41 24.50 90 9 ALA X 21 ? ? -47.14 22.13 91 9 VAL X 22 ? ? 161.80 -27.26 92 9 ILE X 23 ? ? -66.33 0.59 93 9 ALA X 24 ? ? 159.12 34.40 94 10 THR X 5 ? ? 16.51 65.02 95 10 ILE X 6 ? ? 167.41 1.78 96 10 ARG X 7 ? ? -77.19 28.92 97 10 ASN X 12 ? ? 52.09 8.29 98 10 LYS X 17 ? ? 90.03 20.12 99 10 ARG X 19 ? ? 54.60 20.00 100 10 ALA X 21 ? ? -46.29 22.34 101 10 VAL X 22 ? ? 171.81 -34.25 102 10 ILE X 23 ? ? -63.39 0.39 103 10 ALA X 24 ? ? 153.39 42.07 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG X 7 ? ? 0.257 'SIDE CHAIN' 2 1 ARG X 19 ? ? 0.116 'SIDE CHAIN' 3 2 ARG X 7 ? ? 0.283 'SIDE CHAIN' 4 2 ARG X 19 ? ? 0.284 'SIDE CHAIN' 5 3 ARG X 7 ? ? 0.312 'SIDE CHAIN' 6 3 ARG X 19 ? ? 0.307 'SIDE CHAIN' 7 4 ARG X 7 ? ? 0.253 'SIDE CHAIN' 8 4 ARG X 19 ? ? 0.316 'SIDE CHAIN' 9 5 ARG X 7 ? ? 0.253 'SIDE CHAIN' 10 5 ARG X 19 ? ? 0.309 'SIDE CHAIN' 11 6 ARG X 19 ? ? 0.096 'SIDE CHAIN' 12 7 ARG X 19 ? ? 0.318 'SIDE CHAIN' 13 8 ARG X 19 ? ? 0.305 'SIDE CHAIN' 14 9 ARG X 7 ? ? 0.229 'SIDE CHAIN' 15 10 ARG X 7 ? ? 0.266 'SIDE CHAIN' 16 10 ARG X 19 ? ? 0.230 'SIDE CHAIN' # _pdbx_audit_support.funding_organization 'National Institutes of Health/Office of the Director' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #