data_6OEB # _entry.id 6OEB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6OEB pdb_00006oeb 10.2210/pdb6oeb/pdb WWPDB D_1000240522 ? ? # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2019-04-10 _pdbx_database_PDB_obs_spr.pdb_id 6OEB _pdbx_database_PDB_obs_spr.replace_pdb_id 6NLD _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6OEB _pdbx_database_status.recvd_initial_deposition_date 2019-03-27 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Halabelian, L.' 1 ? 'Ravichandran, M.' 2 ? 'Li, Y.' 3 ? 'Zeng, H.' 4 ? 'Bountra, C.' 5 ? 'Edwards, A.M.' 6 ? 'Arrowsmith, C.H.' 7 ? 'Structural Genomics Consortium (SGC)' 8 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1545-9985 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 26 _citation.language ? _citation.page_first 607 _citation.page_last 612 _citation.title 'Structural basis of HMCES interactions with abasic DNA and multivalent substrate recognition.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41594-019-0246-6 _citation.pdbx_database_id_PubMed 31235913 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Halabelian, L.' 1 ? primary 'Ravichandran, M.' 2 ? primary 'Li, Y.' 3 ? primary 'Zeng, H.' 4 ? primary 'Rao, A.' 5 ? primary 'Aravind, L.' 6 ? primary 'Arrowsmith, C.H.' 7 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 92.770 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6OEB _cell.details ? _cell.formula_units_Z ? _cell.length_a 55.728 _cell.length_a_esd ? _cell.length_b 51.151 _cell.length_b_esd ? _cell.length_c 149.210 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6OEB _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein' 31671.617 1 ? ? 'SRAP domain (UNP residues 2-270)' ? 2 polymer syn ;DNA (5'-D(*CP*CP*AP*GP*AP*CP*GP*TP*T)-3') ; 2715.799 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*GP*TP*CP*TP*GP*G)-3') ; 1840.227 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 6 ? ? ? ? 5 non-polymer syn 'UNKNOWN ATOM OR ION' ? 11 ? ? ? ? 6 water nat water 18.015 77 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ES cell-specific 5hmC-binding protein, Putative peptidase SRAPD1, SRAP domain-containing protein 1, HMCES' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;CGRTSCHLPRDVLTRACAYQDRRGQQRLPEWRDPDKYCPSYNKSPQSNSPVLLSRLHFEKDADSSERIIAPMRWGLVPSW FKESDPSKLQFNTTNCRSDTVMEKRSFKVPLGKGRRCVVLADGFYEWQRCQGTNQRQPYFIYFPQIKTEKSGSIGAADSP ENWEKVWDNWRLLTMAGIFDCWEPPEGGDVLYSYTIITVDSCKGLSDIHHRMPAILDGEEAVSKWLDFGEVSTQEALKLI HPTENITFHAVSSVVNNSRNNTPECLAPVAENLYFQ ; ;CGRTSCHLPRDVLTRACAYQDRRGQQRLPEWRDPDKYCPSYNKSPQSNSPVLLSRLHFEKDADSSERIIAPMRWGLVPSW FKESDPSKLQFNTTNCRSDTVMEKRSFKVPLGKGRRCVVLADGFYEWQRCQGTNQRQPYFIYFPQIKTEKSGSIGAADSP ENWEKVWDNWRLLTMAGIFDCWEPPEGGDVLYSYTIITVDSCKGLSDIHHRMPAILDGEEAVSKWLDFGEVSTQEALKLI HPTENITFHAVSSVVNNSRNNTPECLAPVAENLYFQ ; A ? 2 polydeoxyribonucleotide no no '(DC)(DC)(DA)(DG)(DA)(DC)(DG)(DT)(DT)' CCAGACGTT B ? 3 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DT)(DG)(DG)' GTCTGG C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 CYS n 1 2 GLY n 1 3 ARG n 1 4 THR n 1 5 SER n 1 6 CYS n 1 7 HIS n 1 8 LEU n 1 9 PRO n 1 10 ARG n 1 11 ASP n 1 12 VAL n 1 13 LEU n 1 14 THR n 1 15 ARG n 1 16 ALA n 1 17 CYS n 1 18 ALA n 1 19 TYR n 1 20 GLN n 1 21 ASP n 1 22 ARG n 1 23 ARG n 1 24 GLY n 1 25 GLN n 1 26 GLN n 1 27 ARG n 1 28 LEU n 1 29 PRO n 1 30 GLU n 1 31 TRP n 1 32 ARG n 1 33 ASP n 1 34 PRO n 1 35 ASP n 1 36 LYS n 1 37 TYR n 1 38 CYS n 1 39 PRO n 1 40 SER n 1 41 TYR n 1 42 ASN n 1 43 LYS n 1 44 SER n 1 45 PRO n 1 46 GLN n 1 47 SER n 1 48 ASN n 1 49 SER n 1 50 PRO n 1 51 VAL n 1 52 LEU n 1 53 LEU n 1 54 SER n 1 55 ARG n 1 56 LEU n 1 57 HIS n 1 58 PHE n 1 59 GLU n 1 60 LYS n 1 61 ASP n 1 62 ALA n 1 63 ASP n 1 64 SER n 1 65 SER n 1 66 GLU n 1 67 ARG n 1 68 ILE n 1 69 ILE n 1 70 ALA n 1 71 PRO n 1 72 MET n 1 73 ARG n 1 74 TRP n 1 75 GLY n 1 76 LEU n 1 77 VAL n 1 78 PRO n 1 79 SER n 1 80 TRP n 1 81 PHE n 1 82 LYS n 1 83 GLU n 1 84 SER n 1 85 ASP n 1 86 PRO n 1 87 SER n 1 88 LYS n 1 89 LEU n 1 90 GLN n 1 91 PHE n 1 92 ASN n 1 93 THR n 1 94 THR n 1 95 ASN n 1 96 CYS n 1 97 ARG n 1 98 SER n 1 99 ASP n 1 100 THR n 1 101 VAL n 1 102 MET n 1 103 GLU n 1 104 LYS n 1 105 ARG n 1 106 SER n 1 107 PHE n 1 108 LYS n 1 109 VAL n 1 110 PRO n 1 111 LEU n 1 112 GLY n 1 113 LYS n 1 114 GLY n 1 115 ARG n 1 116 ARG n 1 117 CYS n 1 118 VAL n 1 119 VAL n 1 120 LEU n 1 121 ALA n 1 122 ASP n 1 123 GLY n 1 124 PHE n 1 125 TYR n 1 126 GLU n 1 127 TRP n 1 128 GLN n 1 129 ARG n 1 130 CYS n 1 131 GLN n 1 132 GLY n 1 133 THR n 1 134 ASN n 1 135 GLN n 1 136 ARG n 1 137 GLN n 1 138 PRO n 1 139 TYR n 1 140 PHE n 1 141 ILE n 1 142 TYR n 1 143 PHE n 1 144 PRO n 1 145 GLN n 1 146 ILE n 1 147 LYS n 1 148 THR n 1 149 GLU n 1 150 LYS n 1 151 SER n 1 152 GLY n 1 153 SER n 1 154 ILE n 1 155 GLY n 1 156 ALA n 1 157 ALA n 1 158 ASP n 1 159 SER n 1 160 PRO n 1 161 GLU n 1 162 ASN n 1 163 TRP n 1 164 GLU n 1 165 LYS n 1 166 VAL n 1 167 TRP n 1 168 ASP n 1 169 ASN n 1 170 TRP n 1 171 ARG n 1 172 LEU n 1 173 LEU n 1 174 THR n 1 175 MET n 1 176 ALA n 1 177 GLY n 1 178 ILE n 1 179 PHE n 1 180 ASP n 1 181 CYS n 1 182 TRP n 1 183 GLU n 1 184 PRO n 1 185 PRO n 1 186 GLU n 1 187 GLY n 1 188 GLY n 1 189 ASP n 1 190 VAL n 1 191 LEU n 1 192 TYR n 1 193 SER n 1 194 TYR n 1 195 THR n 1 196 ILE n 1 197 ILE n 1 198 THR n 1 199 VAL n 1 200 ASP n 1 201 SER n 1 202 CYS n 1 203 LYS n 1 204 GLY n 1 205 LEU n 1 206 SER n 1 207 ASP n 1 208 ILE n 1 209 HIS n 1 210 HIS n 1 211 ARG n 1 212 MET n 1 213 PRO n 1 214 ALA n 1 215 ILE n 1 216 LEU n 1 217 ASP n 1 218 GLY n 1 219 GLU n 1 220 GLU n 1 221 ALA n 1 222 VAL n 1 223 SER n 1 224 LYS n 1 225 TRP n 1 226 LEU n 1 227 ASP n 1 228 PHE n 1 229 GLY n 1 230 GLU n 1 231 VAL n 1 232 SER n 1 233 THR n 1 234 GLN n 1 235 GLU n 1 236 ALA n 1 237 LEU n 1 238 LYS n 1 239 LEU n 1 240 ILE n 1 241 HIS n 1 242 PRO n 1 243 THR n 1 244 GLU n 1 245 ASN n 1 246 ILE n 1 247 THR n 1 248 PHE n 1 249 HIS n 1 250 ALA n 1 251 VAL n 1 252 SER n 1 253 SER n 1 254 VAL n 1 255 VAL n 1 256 ASN n 1 257 ASN n 1 258 SER n 1 259 ARG n 1 260 ASN n 1 261 ASN n 1 262 THR n 1 263 PRO n 1 264 GLU n 1 265 CYS n 1 266 LEU n 1 267 ALA n 1 268 PRO n 1 269 VAL n 1 270 ALA n 1 271 GLU n 1 272 ASN n 1 273 LEU n 1 274 TYR n 1 275 PHE n 1 276 GLN n 2 1 DC n 2 2 DC n 2 3 DA n 2 4 DG n 2 5 DA n 2 6 DC n 2 7 DG n 2 8 DT n 2 9 DT n 3 1 DG n 3 2 DT n 3 3 DC n 3 4 DT n 3 5 DG n 3 6 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 276 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'HMCES, C3orf37, DC12, SRAPD1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 9 'synthetic construct' ? 32630 ? 3 1 sample 1 6 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP HMCES_HUMAN Q96FZ2 ? 1 ;CGRTSCHLPRDVLTRACAYQDRRGQQRLPEWRDPDKYCPSYNKSPQSNSPVLLSRLHFEKDADSSERIIAPMRWGLVPSW FKESDPSKLQFNTTNCRSDTVMEKRSFKVPLGKGRRCVVLADGFYEWQRCQGTNQRQPYFIYFPQIKTEKSGSIGAADSP ENWEKVWDNWRLLTMAGIFDCWEPPEGGDVLYSYTIITVDSCKGLSDIHHRMPAILDGEEAVSKWLDFGEVSTQEALKLI HPTENITFHAVSSVVNNSRNNTPECLAPV ; 2 2 PDB 6OEB 6OEB ? 2 ? 1 3 PDB 6OEB 6OEB ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6OEB A 1 ? 269 ? Q96FZ2 2 ? 270 ? 2 270 2 2 6OEB B 1 ? 9 ? 6OEB 1 ? 9 ? 1 9 3 3 6OEB C 1 ? 6 ? 6OEB 1 ? 6 ? 1 6 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6OEB ALA A 270 ? UNP Q96FZ2 ? ? 'expression tag' 271 1 1 6OEB GLU A 271 ? UNP Q96FZ2 ? ? 'expression tag' 272 2 1 6OEB ASN A 272 ? UNP Q96FZ2 ? ? 'expression tag' 273 3 1 6OEB LEU A 273 ? UNP Q96FZ2 ? ? 'expression tag' 274 4 1 6OEB TYR A 274 ? UNP Q96FZ2 ? ? 'expression tag' 275 5 1 6OEB PHE A 275 ? UNP Q96FZ2 ? ? 'expression tag' 276 6 1 6OEB GLN A 276 ? UNP Q96FZ2 ? ? 'expression tag' 277 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6OEB _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.00 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 59.05 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '25% PEG3350, 0.2 M ammonium sulfate, 0.1 M HEPES' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-09-18 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(220)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97741 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 5.0.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97741 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 5.0.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6OEB _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.100 _reflns.d_resolution_low 48.380 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 24718 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.800 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.400 _reflns.pdbx_Rmerge_I_obs 0.079 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.200 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.090 _reflns.pdbx_Rpim_I_all 0.042 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.997 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.100 2.160 ? ? ? ? ? ? 2021 99.700 ? ? ? ? 0.860 ? ? ? ? ? ? ? ? 4.300 ? ? ? ? 0.980 0.462 ? 1 1 0.814 ? 8.910 48.380 ? ? ? ? ? ? 354 99.200 ? ? ? ? 0.037 ? ? ? ? ? ? ? ? 4.000 ? ? ? ? 0.044 0.022 ? 2 1 0.993 ? # _refine.aniso_B[1][1] 2.5100 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.9000 _refine.aniso_B[2][2] 3.5800 _refine.aniso_B[2][3] -0.0000 _refine.aniso_B[3][3] -5.9800 _refine.B_iso_max 126.720 _refine.B_iso_mean 46.7720 _refine.B_iso_min 29.860 _refine.correlation_coeff_Fo_to_Fc 0.9620 _refine.correlation_coeff_Fo_to_Fc_free 0.9480 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6OEB _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.1000 _refine.ls_d_res_low 48.380 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 23486 _refine.ls_number_reflns_R_free 1232 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.7700 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2074 _refine.ls_R_factor_R_free 0.2359 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2058 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 5KO9' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.1890 _refine.pdbx_overall_ESU_R_Free 0.1640 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 7.8390 _refine.overall_SU_ML 0.1770 _refine.overall_SU_R_Cruickshank_DPI 0.1889 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.1000 _refine_hist.d_res_low 48.380 _refine_hist.number_atoms_solvent 77 _refine_hist.number_atoms_total 2477 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 272 _refine_hist.pdbx_B_iso_mean_ligand 57.52 _refine_hist.pdbx_B_iso_mean_solvent 47.49 _refine_hist.pdbx_number_atoms_protein 2063 _refine_hist.pdbx_number_atoms_nucleic_acid 302 _refine_hist.pdbx_number_atoms_ligand 35 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 0.012 2493 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.018 2088 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.527 1.581 3439 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.306 1.695 4856 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 7.883 5.000 258 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 30.154 21.210 124 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 15.107 15.000 342 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 11.056 15.000 19 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.064 0.200 315 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 0.020 2590 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 557 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.1000 _refine_ls_shell.d_res_low 2.1540 _refine_ls_shell.number_reflns_all 1820 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 77 _refine_ls_shell.number_reflns_R_work 1743 _refine_ls_shell.percent_reflns_obs 99.7300 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3380 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.3630 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6OEB _struct.title ;Crystal structure of HMCES SRAP domain in complex with 3' overhang DNA ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6OEB _struct_keywords.text ;SRAP Domain, HMCES, Structural Genomics, Structural Genomics Consortium, SGC, DNA binding protein, DNA-protein complex, DNA-damage protein, 3' overhang, DNA BINDING PROTEIN-DNA complex ; _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 5 ? J N N 5 ? K N N 5 ? L N N 5 ? M N N 5 ? N N N 5 ? O N N 5 ? P N N 5 ? Q N N 5 ? R N N 5 ? S N N 5 ? T N N 4 ? U N N 6 ? V N N 6 ? W N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 9 ? ALA A 16 ? PRO A 10 ALA A 17 1 ? 8 HELX_P HELX_P2 AA2 ASP A 33 ? TYR A 37 ? ASP A 34 TYR A 38 5 ? 5 HELX_P HELX_P3 AA3 LEU A 56 ? PHE A 58 ? LEU A 57 PHE A 59 5 ? 3 HELX_P HELX_P4 AA4 ASP A 85 ? LEU A 89 ? ASP A 86 LEU A 90 5 ? 5 HELX_P HELX_P5 AA5 THR A 100 ? GLU A 103 ? THR A 101 GLU A 104 5 ? 4 HELX_P HELX_P6 AA6 LYS A 104 ? LYS A 113 ? LYS A 105 LYS A 114 1 ? 10 HELX_P HELX_P7 AA7 GLU A 161 ? ASN A 169 ? GLU A 162 ASN A 170 1 ? 9 HELX_P HELX_P8 AA8 CYS A 202 ? SER A 206 ? CYS A 203 SER A 207 5 ? 5 HELX_P HELX_P9 AA9 GLY A 218 ? ASP A 227 ? GLY A 219 ASP A 228 1 ? 10 HELX_P HELX_P10 AB1 SER A 232 ? LYS A 238 ? SER A 233 LYS A 239 1 ? 7 HELX_P HELX_P11 AB2 SER A 252 ? ASN A 257 ? SER A 253 ASN A 258 5 ? 6 HELX_P HELX_P12 AB3 THR A 262 ? LEU A 266 ? THR A 263 LEU A 267 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? B DC 1 N3 ? ? ? 1_555 C DG 6 N1 ? ? B DC 1 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DC 1 N4 ? ? ? 1_555 C DG 6 O6 ? ? B DC 1 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 1 O2 ? ? ? 1_555 C DG 6 N2 ? ? B DC 1 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 2 N3 ? ? ? 1_555 C DG 5 N1 ? ? B DC 2 C DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 2 N4 ? ? ? 1_555 C DG 5 O6 ? ? B DC 2 C DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 2 O2 ? ? ? 1_555 C DG 5 N2 ? ? B DC 2 C DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DA 3 N1 ? ? ? 1_555 C DT 4 N3 ? ? B DA 3 C DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DA 3 N6 ? ? ? 1_555 C DT 4 O4 ? ? B DA 3 C DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 4 N1 ? ? ? 1_555 C DC 3 N3 ? ? B DG 4 C DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 4 N2 ? ? ? 1_555 C DC 3 O2 ? ? B DG 4 C DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 4 O6 ? ? ? 1_555 C DC 3 N4 ? ? B DG 4 C DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DA 5 N1 ? ? ? 1_555 C DT 2 N3 ? ? B DA 5 C DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DA 5 N6 ? ? ? 1_555 C DT 2 O4 ? ? B DA 5 C DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 6 N3 ? ? ? 1_555 C DG 1 N1 ? ? B DC 6 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 6 N4 ? ? ? 1_555 C DG 1 O6 ? ? B DC 6 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 6 O2 ? ? ? 1_555 C DG 1 N2 ? ? B DC 6 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 2 ? AA3 ? 4 ? AA4 ? 3 ? AA5 ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? parallel AA3 3 4 ? parallel AA4 1 2 ? parallel AA4 2 3 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA5 5 6 ? anti-parallel AA5 6 7 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 40 ? LYS A 43 ? SER A 41 LYS A 44 AA1 2 THR A 4 ? CYS A 6 ? THR A 5 CYS A 7 AA1 3 GLY A 123 ? ARG A 129 ? GLY A 124 ARG A 130 AA1 4 ARG A 136 ? TYR A 142 ? ARG A 137 TYR A 143 AA1 5 THR A 247 ? ALA A 250 ? THR A 248 ALA A 251 AA2 1 TYR A 19 ? GLN A 20 ? TYR A 20 GLN A 21 AA2 2 GLN A 26 ? ARG A 27 ? GLN A 27 ARG A 28 AA3 1 GLU A 30 ? TRP A 31 ? GLU A 31 TRP A 32 AA3 2 ARG A 67 ? TRP A 74 ? ARG A 68 TRP A 75 AA3 3 LEU A 191 ? ASP A 200 ? LEU A 192 ASP A 201 AA3 4 ASN A 95 ? ARG A 97 ? ASN A 96 ARG A 98 AA4 1 ASN A 95 ? ARG A 97 ? ASN A 96 ARG A 98 AA4 2 LEU A 191 ? ASP A 200 ? LEU A 192 ASP A 201 AA4 3 ARG A 211 ? PRO A 213 ? ARG A 212 PRO A 214 AA5 1 ARG A 211 ? PRO A 213 ? ARG A 212 PRO A 214 AA5 2 LEU A 191 ? ASP A 200 ? LEU A 192 ASP A 201 AA5 3 LEU A 173 ? TRP A 182 ? LEU A 174 TRP A 183 AA5 4 ARG A 116 ? ALA A 121 ? ARG A 117 ALA A 122 AA5 5 ASN A 48 ? SER A 54 ? ASN A 49 SER A 55 AA5 6 ARG A 67 ? TRP A 74 ? ARG A 68 TRP A 75 AA5 7 GLU A 30 ? TRP A 31 ? GLU A 31 TRP A 32 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LYS A 43 ? O LYS A 44 N THR A 4 ? N THR A 5 AA1 2 3 N SER A 5 ? N SER A 6 O GLY A 123 ? O GLY A 124 AA1 3 4 N PHE A 124 ? N PHE A 125 O ILE A 141 ? O ILE A 142 AA1 4 5 N TYR A 142 ? N TYR A 143 O THR A 247 ? O THR A 248 AA2 1 2 N TYR A 19 ? N TYR A 20 O ARG A 27 ? O ARG A 28 AA3 1 2 N GLU A 30 ? N GLU A 31 O ILE A 69 ? O ILE A 70 AA3 2 3 N ARG A 73 ? N ARG A 74 O TYR A 194 ? O TYR A 195 AA3 3 4 O THR A 198 ? O THR A 199 N CYS A 96 ? N CYS A 97 AA4 1 2 N CYS A 96 ? N CYS A 97 O THR A 198 ? O THR A 199 AA4 2 3 N VAL A 199 ? N VAL A 200 O MET A 212 ? O MET A 213 AA5 1 2 O MET A 212 ? O MET A 213 N VAL A 199 ? N VAL A 200 AA5 2 3 O LEU A 191 ? O LEU A 192 N TRP A 182 ? N TRP A 183 AA5 3 4 O MET A 175 ? O MET A 176 N VAL A 119 ? N VAL A 120 AA5 4 5 O VAL A 118 ? O VAL A 119 N LEU A 52 ? N LEU A 53 AA5 5 6 N LEU A 53 ? N LEU A 54 O ILE A 68 ? O ILE A 69 AA5 6 7 O ILE A 69 ? O ILE A 70 N GLU A 30 ? N GLU A 31 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 301 ? 7 'binding site for residue EDO A 301' AC2 Software A EDO 302 ? 5 'binding site for residue EDO A 302' AC3 Software A EDO 303 ? 7 'binding site for residue EDO A 303' AC4 Software A EDO 304 ? 4 'binding site for residue EDO A 304' AC5 Software A EDO 305 ? 5 'binding site for residue EDO A 305' AC6 Software C EDO 101 ? 2 'binding site for residue EDO C 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 LYS A 36 ? LYS A 37 . ? 1_555 ? 2 AC1 7 ASN A 48 ? ASN A 49 . ? 1_555 ? 3 AC1 7 VAL A 190 ? VAL A 191 . ? 1_555 ? 4 AC1 7 LEU A 191 ? LEU A 192 . ? 1_555 ? 5 AC1 7 TYR A 192 ? TYR A 193 . ? 1_555 ? 6 AC1 7 EDO E . ? EDO A 302 . ? 1_555 ? 7 AC1 7 HOH U . ? HOH A 429 . ? 1_555 ? 8 AC2 5 ASP A 33 ? ASP A 34 . ? 1_555 ? 9 AC2 5 PHE A 58 ? PHE A 59 . ? 1_555 ? 10 AC2 5 PRO A 71 ? PRO A 72 . ? 1_555 ? 11 AC2 5 TYR A 192 ? TYR A 193 . ? 1_555 ? 12 AC2 5 EDO D . ? EDO A 301 . ? 1_555 ? 13 AC3 7 ALA A 16 ? ALA A 17 . ? 1_555 ? 14 AC3 7 CYS A 17 ? CYS A 18 . ? 1_555 ? 15 AC3 7 LEU A 52 ? LEU A 53 . ? 1_555 ? 16 AC3 7 ARG A 67 ? ARG A 68 . ? 1_555 ? 17 AC3 7 THR A 174 ? THR A 175 . ? 1_555 ? 18 AC3 7 GLU A 219 ? GLU A 220 . ? 1_555 ? 19 AC3 7 HOH U . ? HOH A 436 . ? 1_555 ? 20 AC4 4 HIS A 7 ? HIS A 8 . ? 1_555 ? 21 AC4 4 PRO A 39 ? PRO A 40 . ? 1_555 ? 22 AC4 4 SER A 40 ? SER A 41 . ? 1_555 ? 23 AC4 4 ASN A 261 ? ASN A 262 . ? 1_555 ? 24 AC5 5 ARG A 15 ? ARG A 16 . ? 2_555 ? 25 AC5 5 ASP A 33 ? ASP A 34 . ? 1_555 ? 26 AC5 5 PRO A 34 ? PRO A 35 . ? 1_555 ? 27 AC5 5 ASP A 35 ? ASP A 36 . ? 1_555 ? 28 AC5 5 HOH U . ? HOH A 447 . ? 1_555 ? 29 AC6 2 ASN A 92 ? ASN A 93 . ? 4_454 ? 30 AC6 2 DG C 5 ? DG C 5 . ? 1_555 ? # _atom_sites.entry_id 6OEB _atom_sites.fract_transf_matrix[1][1] 0.017944 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000868 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019550 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006710 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S X # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 CYS 1 2 2 CYS CYS A . n A 1 2 GLY 2 3 3 GLY GLY A . n A 1 3 ARG 3 4 4 ARG ARG A . n A 1 4 THR 4 5 5 THR THR A . n A 1 5 SER 5 6 6 SER SER A . n A 1 6 CYS 6 7 7 CYS CYS A . n A 1 7 HIS 7 8 8 HIS HIS A . n A 1 8 LEU 8 9 9 LEU LEU A . n A 1 9 PRO 9 10 10 PRO PRO A . n A 1 10 ARG 10 11 11 ARG ARG A . n A 1 11 ASP 11 12 12 ASP ASP A . n A 1 12 VAL 12 13 13 VAL VAL A . n A 1 13 LEU 13 14 14 LEU LEU A . n A 1 14 THR 14 15 15 THR THR A . n A 1 15 ARG 15 16 16 ARG ARG A . n A 1 16 ALA 16 17 17 ALA ALA A . n A 1 17 CYS 17 18 18 CYS CYS A . n A 1 18 ALA 18 19 19 ALA ALA A . n A 1 19 TYR 19 20 20 TYR TYR A . n A 1 20 GLN 20 21 21 GLN GLN A . n A 1 21 ASP 21 22 22 ASP ASP A . n A 1 22 ARG 22 23 23 ARG ARG A . n A 1 23 ARG 23 24 24 ARG ARG A . n A 1 24 GLY 24 25 25 GLY GLY A . n A 1 25 GLN 25 26 26 GLN GLN A . n A 1 26 GLN 26 27 27 GLN GLN A . n A 1 27 ARG 27 28 28 ARG ARG A . n A 1 28 LEU 28 29 29 LEU LEU A . n A 1 29 PRO 29 30 30 PRO PRO A . n A 1 30 GLU 30 31 31 GLU GLU A . n A 1 31 TRP 31 32 32 TRP TRP A . n A 1 32 ARG 32 33 33 ARG ARG A . n A 1 33 ASP 33 34 34 ASP ASP A . n A 1 34 PRO 34 35 35 PRO PRO A . n A 1 35 ASP 35 36 36 ASP ASP A . n A 1 36 LYS 36 37 37 LYS LYS A . n A 1 37 TYR 37 38 38 TYR TYR A . n A 1 38 CYS 38 39 39 CYS CYS A . n A 1 39 PRO 39 40 40 PRO PRO A . n A 1 40 SER 40 41 41 SER SER A . n A 1 41 TYR 41 42 42 TYR TYR A . n A 1 42 ASN 42 43 43 ASN ASN A . n A 1 43 LYS 43 44 44 LYS LYS A . n A 1 44 SER 44 45 45 SER SER A . n A 1 45 PRO 45 46 46 PRO PRO A . n A 1 46 GLN 46 47 47 GLN GLN A . n A 1 47 SER 47 48 48 SER SER A . n A 1 48 ASN 48 49 49 ASN ASN A . n A 1 49 SER 49 50 50 SER SER A . n A 1 50 PRO 50 51 51 PRO PRO A . n A 1 51 VAL 51 52 52 VAL VAL A . n A 1 52 LEU 52 53 53 LEU LEU A . n A 1 53 LEU 53 54 54 LEU LEU A . n A 1 54 SER 54 55 55 SER SER A . n A 1 55 ARG 55 56 56 ARG ARG A . n A 1 56 LEU 56 57 57 LEU LEU A . n A 1 57 HIS 57 58 58 HIS HIS A . n A 1 58 PHE 58 59 59 PHE PHE A . n A 1 59 GLU 59 60 60 GLU GLU A . n A 1 60 LYS 60 61 61 LYS LYS A . n A 1 61 ASP 61 62 62 ASP ASP A . n A 1 62 ALA 62 63 63 ALA ALA A . n A 1 63 ASP 63 64 64 ASP ASP A . n A 1 64 SER 64 65 65 SER SER A . n A 1 65 SER 65 66 66 SER SER A . n A 1 66 GLU 66 67 67 GLU GLU A . n A 1 67 ARG 67 68 68 ARG ARG A . n A 1 68 ILE 68 69 69 ILE ILE A . n A 1 69 ILE 69 70 70 ILE ILE A . n A 1 70 ALA 70 71 71 ALA ALA A . n A 1 71 PRO 71 72 72 PRO PRO A . n A 1 72 MET 72 73 73 MET MET A . n A 1 73 ARG 73 74 74 ARG ARG A . n A 1 74 TRP 74 75 75 TRP TRP A . n A 1 75 GLY 75 76 76 GLY GLY A . n A 1 76 LEU 76 77 77 LEU LEU A . n A 1 77 VAL 77 78 78 VAL VAL A . n A 1 78 PRO 78 79 79 PRO PRO A . n A 1 79 SER 79 80 80 SER SER A . n A 1 80 TRP 80 81 81 TRP TRP A . n A 1 81 PHE 81 82 82 PHE PHE A . n A 1 82 LYS 82 83 83 LYS LYS A . n A 1 83 GLU 83 84 84 GLU GLU A . n A 1 84 SER 84 85 85 SER SER A . n A 1 85 ASP 85 86 86 ASP ASP A . n A 1 86 PRO 86 87 87 PRO PRO A . n A 1 87 SER 87 88 88 SER SER A . n A 1 88 LYS 88 89 89 LYS LYS A . n A 1 89 LEU 89 90 90 LEU LEU A . n A 1 90 GLN 90 91 91 GLN GLN A . n A 1 91 PHE 91 92 92 PHE PHE A . n A 1 92 ASN 92 93 93 ASN ASN A . n A 1 93 THR 93 94 94 THR THR A . n A 1 94 THR 94 95 95 THR THR A . n A 1 95 ASN 95 96 96 ASN ASN A . n A 1 96 CYS 96 97 97 CYS CYS A . n A 1 97 ARG 97 98 98 ARG ARG A . n A 1 98 SER 98 99 99 SER SER A . n A 1 99 ASP 99 100 100 ASP ASP A . n A 1 100 THR 100 101 101 THR THR A . n A 1 101 VAL 101 102 102 VAL VAL A . n A 1 102 MET 102 103 103 MET MET A . n A 1 103 GLU 103 104 104 GLU GLU A . n A 1 104 LYS 104 105 105 LYS LYS A . n A 1 105 ARG 105 106 106 ARG ARG A . n A 1 106 SER 106 107 107 SER SER A . n A 1 107 PHE 107 108 108 PHE PHE A . n A 1 108 LYS 108 109 109 LYS LYS A . n A 1 109 VAL 109 110 110 VAL VAL A . n A 1 110 PRO 110 111 111 PRO PRO A . n A 1 111 LEU 111 112 112 LEU LEU A . n A 1 112 GLY 112 113 113 GLY GLY A . n A 1 113 LYS 113 114 114 LYS LYS A . n A 1 114 GLY 114 115 115 GLY GLY A . n A 1 115 ARG 115 116 116 ARG ARG A . n A 1 116 ARG 116 117 117 ARG ARG A . n A 1 117 CYS 117 118 118 CYS CYS A . n A 1 118 VAL 118 119 119 VAL VAL A . n A 1 119 VAL 119 120 120 VAL VAL A . n A 1 120 LEU 120 121 121 LEU LEU A . n A 1 121 ALA 121 122 122 ALA ALA A . n A 1 122 ASP 122 123 123 ASP ASP A . n A 1 123 GLY 123 124 124 GLY GLY A . n A 1 124 PHE 124 125 125 PHE PHE A . n A 1 125 TYR 125 126 126 TYR TYR A . n A 1 126 GLU 126 127 127 GLU GLU A . n A 1 127 TRP 127 128 128 TRP TRP A . n A 1 128 GLN 128 129 129 GLN GLN A . n A 1 129 ARG 129 130 130 ARG ARG A . n A 1 130 CYS 130 131 131 CYS CYS A . n A 1 131 GLN 131 132 132 GLN GLN A . n A 1 132 GLY 132 133 133 GLY GLY A . n A 1 133 THR 133 134 134 THR THR A . n A 1 134 ASN 134 135 135 ASN ASN A . n A 1 135 GLN 135 136 136 GLN GLN A . n A 1 136 ARG 136 137 137 ARG ARG A . n A 1 137 GLN 137 138 138 GLN GLN A . n A 1 138 PRO 138 139 139 PRO PRO A . n A 1 139 TYR 139 140 140 TYR TYR A . n A 1 140 PHE 140 141 141 PHE PHE A . n A 1 141 ILE 141 142 142 ILE ILE A . n A 1 142 TYR 142 143 143 TYR TYR A . n A 1 143 PHE 143 144 144 PHE PHE A . n A 1 144 PRO 144 145 145 PRO PRO A . n A 1 145 GLN 145 146 146 GLN GLN A . n A 1 146 ILE 146 147 147 ILE ILE A . n A 1 147 LYS 147 148 148 LYS LYS A . n A 1 148 THR 148 149 ? ? ? A . n A 1 149 GLU 149 150 ? ? ? A . n A 1 150 LYS 150 151 ? ? ? A . n A 1 151 SER 151 152 ? ? ? A . n A 1 152 GLY 152 153 ? ? ? A . n A 1 153 SER 153 154 ? ? ? A . n A 1 154 ILE 154 155 ? ? ? A . n A 1 155 GLY 155 156 ? ? ? A . n A 1 156 ALA 156 157 ? ? ? A . n A 1 157 ALA 157 158 ? ? ? A . n A 1 158 ASP 158 159 ? ? ? A . n A 1 159 SER 159 160 ? ? ? A . n A 1 160 PRO 160 161 161 PRO PRO A . n A 1 161 GLU 161 162 162 GLU GLU A . n A 1 162 ASN 162 163 163 ASN ASN A . n A 1 163 TRP 163 164 164 TRP TRP A . n A 1 164 GLU 164 165 165 GLU GLU A . n A 1 165 LYS 165 166 166 LYS LYS A . n A 1 166 VAL 166 167 167 VAL VAL A . n A 1 167 TRP 167 168 168 TRP TRP A . n A 1 168 ASP 168 169 169 ASP ASP A . n A 1 169 ASN 169 170 170 ASN ASN A . n A 1 170 TRP 170 171 171 TRP TRP A . n A 1 171 ARG 171 172 172 ARG ARG A . n A 1 172 LEU 172 173 173 LEU LEU A . n A 1 173 LEU 173 174 174 LEU LEU A . n A 1 174 THR 174 175 175 THR THR A . n A 1 175 MET 175 176 176 MET MET A . n A 1 176 ALA 176 177 177 ALA ALA A . n A 1 177 GLY 177 178 178 GLY GLY A . n A 1 178 ILE 178 179 179 ILE ILE A . n A 1 179 PHE 179 180 180 PHE PHE A . n A 1 180 ASP 180 181 181 ASP ASP A . n A 1 181 CYS 181 182 182 CYS CYS A . n A 1 182 TRP 182 183 183 TRP TRP A . n A 1 183 GLU 183 184 184 GLU GLU A . n A 1 184 PRO 184 185 185 PRO PRO A . n A 1 185 PRO 185 186 186 PRO PRO A . n A 1 186 GLU 186 187 187 GLU GLU A . n A 1 187 GLY 187 188 188 GLY GLY A . n A 1 188 GLY 188 189 189 GLY GLY A . n A 1 189 ASP 189 190 190 ASP ASP A . n A 1 190 VAL 190 191 191 VAL VAL A . n A 1 191 LEU 191 192 192 LEU LEU A . n A 1 192 TYR 192 193 193 TYR TYR A . n A 1 193 SER 193 194 194 SER SER A . n A 1 194 TYR 194 195 195 TYR TYR A . n A 1 195 THR 195 196 196 THR THR A . n A 1 196 ILE 196 197 197 ILE ILE A . n A 1 197 ILE 197 198 198 ILE ILE A . n A 1 198 THR 198 199 199 THR THR A . n A 1 199 VAL 199 200 200 VAL VAL A . n A 1 200 ASP 200 201 201 ASP ASP A . n A 1 201 SER 201 202 202 SER SER A . n A 1 202 CYS 202 203 203 CYS CYS A . n A 1 203 LYS 203 204 204 LYS LYS A . n A 1 204 GLY 204 205 205 GLY GLY A . n A 1 205 LEU 205 206 206 LEU LEU A . n A 1 206 SER 206 207 207 SER SER A . n A 1 207 ASP 207 208 208 ASP ASP A . n A 1 208 ILE 208 209 209 ILE ILE A . n A 1 209 HIS 209 210 210 HIS HIS A . n A 1 210 HIS 210 211 211 HIS HIS A . n A 1 211 ARG 211 212 212 ARG ARG A . n A 1 212 MET 212 213 213 MET MET A . n A 1 213 PRO 213 214 214 PRO PRO A . n A 1 214 ALA 214 215 215 ALA ALA A . n A 1 215 ILE 215 216 216 ILE ILE A . n A 1 216 LEU 216 217 217 LEU LEU A . n A 1 217 ASP 217 218 218 ASP ASP A . n A 1 218 GLY 218 219 219 GLY GLY A . n A 1 219 GLU 219 220 220 GLU GLU A . n A 1 220 GLU 220 221 221 GLU GLU A . n A 1 221 ALA 221 222 222 ALA ALA A . n A 1 222 VAL 222 223 223 VAL VAL A . n A 1 223 SER 223 224 224 SER SER A . n A 1 224 LYS 224 225 225 LYS LYS A . n A 1 225 TRP 225 226 226 TRP TRP A . n A 1 226 LEU 226 227 227 LEU LEU A . n A 1 227 ASP 227 228 228 ASP ASP A . n A 1 228 PHE 228 229 229 PHE PHE A . n A 1 229 GLY 229 230 230 GLY GLY A . n A 1 230 GLU 230 231 231 GLU GLU A . n A 1 231 VAL 231 232 232 VAL VAL A . n A 1 232 SER 232 233 233 SER SER A . n A 1 233 THR 233 234 234 THR THR A . n A 1 234 GLN 234 235 235 GLN GLN A . n A 1 235 GLU 235 236 236 GLU GLU A . n A 1 236 ALA 236 237 237 ALA ALA A . n A 1 237 LEU 237 238 238 LEU LEU A . n A 1 238 LYS 238 239 239 LYS LYS A . n A 1 239 LEU 239 240 240 LEU LEU A . n A 1 240 ILE 240 241 241 ILE ILE A . n A 1 241 HIS 241 242 242 HIS HIS A . n A 1 242 PRO 242 243 243 PRO PRO A . n A 1 243 THR 243 244 244 THR THR A . n A 1 244 GLU 244 245 245 GLU GLU A . n A 1 245 ASN 245 246 246 ASN ASN A . n A 1 246 ILE 246 247 247 ILE ILE A . n A 1 247 THR 247 248 248 THR THR A . n A 1 248 PHE 248 249 249 PHE PHE A . n A 1 249 HIS 249 250 250 HIS HIS A . n A 1 250 ALA 250 251 251 ALA ALA A . n A 1 251 VAL 251 252 252 VAL VAL A . n A 1 252 SER 252 253 253 SER SER A . n A 1 253 SER 253 254 254 SER SER A . n A 1 254 VAL 254 255 255 VAL VAL A . n A 1 255 VAL 255 256 256 VAL VAL A . n A 1 256 ASN 256 257 257 ASN ASN A . n A 1 257 ASN 257 258 258 ASN ASN A . n A 1 258 SER 258 259 259 SER SER A . n A 1 259 ARG 259 260 260 ARG ARG A . n A 1 260 ASN 260 261 261 ASN ASN A . n A 1 261 ASN 261 262 262 ASN ASN A . n A 1 262 THR 262 263 263 THR THR A . n A 1 263 PRO 263 264 264 PRO PRO A . n A 1 264 GLU 264 265 265 GLU GLU A . n A 1 265 CYS 265 266 266 CYS CYS A . n A 1 266 LEU 266 267 267 LEU LEU A . n A 1 267 ALA 267 268 268 ALA ALA A . n A 1 268 PRO 268 269 269 PRO PRO A . n A 1 269 VAL 269 270 270 VAL VAL A . n A 1 270 ALA 270 271 ? ? ? A . n A 1 271 GLU 271 272 ? ? ? A . n A 1 272 ASN 272 273 ? ? ? A . n A 1 273 LEU 273 274 ? ? ? A . n A 1 274 TYR 274 275 ? ? ? A . n A 1 275 PHE 275 276 ? ? ? A . n A 1 276 GLN 276 277 ? ? ? A . n B 2 1 DC 1 1 1 DC DC B . n B 2 2 DC 2 2 2 DC DC B . n B 2 3 DA 3 3 3 DA DA B . n B 2 4 DG 4 4 4 DG DG B . n B 2 5 DA 5 5 5 DA DA B . n B 2 6 DC 6 6 6 DC DC B . n B 2 7 DG 7 7 7 DG DG B . n B 2 8 DT 8 8 8 DT DT B . n B 2 9 DT 9 9 9 DT DT B . n C 3 1 DG 1 1 1 DG DG C . n C 3 2 DT 2 2 2 DT DT C . n C 3 3 DC 3 3 3 DC DC C . n C 3 4 DT 4 4 4 DT DT C . n C 3 5 DG 5 5 5 DG DG C . n C 3 6 DG 6 6 6 DG DG C . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 EDO 1 301 301 EDO EDO A . E 4 EDO 1 302 401 EDO EDO A . F 4 EDO 1 303 501 EDO EDO A . G 4 EDO 1 304 601 EDO EDO A . H 4 EDO 1 305 701 EDO EDO A . I 5 UNX 1 306 1 UNX UNX A . J 5 UNX 1 307 2 UNX UNX A . K 5 UNX 1 308 3 UNX UNX A . L 5 UNX 1 309 6 UNX UNX A . M 5 UNX 1 310 7 UNX UNX A . N 5 UNX 1 311 16 UNX UNX A . O 5 UNX 1 312 17 UNX UNX A . P 5 UNX 1 313 18 UNX UNX A . Q 5 UNX 1 314 19 UNX UNX A . R 5 UNX 1 315 20 UNX UNX A . S 5 UNX 1 101 8 UNX UNX B . T 4 EDO 1 101 101 EDO EDO C . U 6 HOH 1 401 28 HOH HOH A . U 6 HOH 2 402 46 HOH HOH A . U 6 HOH 3 403 22 HOH HOH A . U 6 HOH 4 404 8 HOH HOH A . U 6 HOH 5 405 20 HOH HOH A . U 6 HOH 6 406 13 HOH HOH A . U 6 HOH 7 407 31 HOH HOH A . U 6 HOH 8 408 38 HOH HOH A . U 6 HOH 9 409 43 HOH HOH A . U 6 HOH 10 410 54 HOH HOH A . U 6 HOH 11 411 47 HOH HOH A . U 6 HOH 12 412 52 HOH HOH A . U 6 HOH 13 413 83 HOH HOH A . U 6 HOH 14 414 5 HOH HOH A . U 6 HOH 15 415 11 HOH HOH A . U 6 HOH 16 416 12 HOH HOH A . U 6 HOH 17 417 78 HOH HOH A . U 6 HOH 18 418 19 HOH HOH A . U 6 HOH 19 419 59 HOH HOH A . U 6 HOH 20 420 3 HOH HOH A . U 6 HOH 21 421 41 HOH HOH A . U 6 HOH 22 422 80 HOH HOH A . U 6 HOH 23 423 48 HOH HOH A . U 6 HOH 24 424 73 HOH HOH A . U 6 HOH 25 425 68 HOH HOH A . U 6 HOH 26 426 27 HOH HOH A . U 6 HOH 27 427 23 HOH HOH A . U 6 HOH 28 428 55 HOH HOH A . U 6 HOH 29 429 84 HOH HOH A . U 6 HOH 30 430 18 HOH HOH A . U 6 HOH 31 431 36 HOH HOH A . U 6 HOH 32 432 4 HOH HOH A . U 6 HOH 33 433 79 HOH HOH A . U 6 HOH 34 434 2 HOH HOH A . U 6 HOH 35 435 14 HOH HOH A . U 6 HOH 36 436 34 HOH HOH A . U 6 HOH 37 437 6 HOH HOH A . U 6 HOH 38 438 51 HOH HOH A . U 6 HOH 39 439 29 HOH HOH A . U 6 HOH 40 440 1 HOH HOH A . U 6 HOH 41 441 63 HOH HOH A . U 6 HOH 42 442 56 HOH HOH A . U 6 HOH 43 443 74 HOH HOH A . U 6 HOH 44 444 66 HOH HOH A . U 6 HOH 45 445 72 HOH HOH A . U 6 HOH 46 446 40 HOH HOH A . U 6 HOH 47 447 42 HOH HOH A . U 6 HOH 48 448 17 HOH HOH A . U 6 HOH 49 449 71 HOH HOH A . U 6 HOH 50 450 53 HOH HOH A . U 6 HOH 51 451 65 HOH HOH A . U 6 HOH 52 452 33 HOH HOH A . U 6 HOH 53 453 7 HOH HOH A . U 6 HOH 54 454 35 HOH HOH A . U 6 HOH 55 455 67 HOH HOH A . U 6 HOH 56 456 45 HOH HOH A . U 6 HOH 57 457 58 HOH HOH A . U 6 HOH 58 458 24 HOH HOH A . U 6 HOH 59 459 44 HOH HOH A . U 6 HOH 60 460 64 HOH HOH A . U 6 HOH 61 461 50 HOH HOH A . U 6 HOH 62 462 32 HOH HOH A . U 6 HOH 63 463 57 HOH HOH A . U 6 HOH 64 464 10 HOH HOH A . U 6 HOH 65 465 9 HOH HOH A . U 6 HOH 66 466 60 HOH HOH A . U 6 HOH 67 467 30 HOH HOH A . U 6 HOH 68 468 25 HOH HOH A . U 6 HOH 69 469 85 HOH HOH A . U 6 HOH 70 470 86 HOH HOH A . U 6 HOH 71 471 82 HOH HOH A . V 6 HOH 1 201 26 HOH HOH B . V 6 HOH 2 202 61 HOH HOH B . V 6 HOH 3 203 15 HOH HOH B . V 6 HOH 4 204 16 HOH HOH B . W 6 HOH 1 201 69 HOH HOH C . W 6 HOH 2 202 81 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W 1 2 B,C,S,T,V,W # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_444 -x-1/2,y-1/2,-z-1/2 -1.0000000000 0.0000000000 0.0000000000 -24.2585798729 0.0000000000 1.0000000000 0.0000000000 -25.5755000000 0.0000000000 0.0000000000 -1.0000000000 -74.5178298846 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-04-10 2 'Structure model' 1 1 2019-06-26 3 'Structure model' 1 2 2019-07-10 4 'Structure model' 1 3 2019-07-17 5 'Structure model' 1 4 2023-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 4 'Structure model' citation 5 5 'Structure model' chem_comp_atom 6 5 'Structure model' chem_comp_bond 7 5 'Structure model' database_2 8 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.pdbx_database_id_DOI' 6 2 'Structure model' '_citation.title' 7 2 'Structure model' '_citation.year' 8 2 'Structure model' '_citation_author.name' 9 3 'Structure model' '_citation.pdbx_database_id_PubMed' 10 3 'Structure model' '_citation.title' 11 4 'Structure model' '_citation.journal_volume' 12 4 'Structure model' '_citation.page_first' 13 4 'Structure model' '_citation.page_last' 14 5 'Structure model' '_database_2.pdbx_DOI' 15 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.7.4 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O5'" _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 DG _pdbx_validate_rmsd_angle.auth_seq_id_1 4 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 P _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 DG _pdbx_validate_rmsd_angle.auth_seq_id_2 4 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OP1 _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 DG _pdbx_validate_rmsd_angle.auth_seq_id_3 4 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 100.03 _pdbx_validate_rmsd_angle.angle_target_value 105.70 _pdbx_validate_rmsd_angle.angle_deviation -5.67 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id GLN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 47 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 86.40 _pdbx_validate_torsion.psi -17.18 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 61 ? CG ? A LYS 60 CG 2 1 Y 1 A LYS 61 ? CD ? A LYS 60 CD 3 1 Y 1 A LYS 61 ? CE ? A LYS 60 CE 4 1 Y 1 A LYS 61 ? NZ ? A LYS 60 NZ 5 1 Y 1 A LYS 148 ? CG ? A LYS 147 CG 6 1 Y 1 A LYS 148 ? CD ? A LYS 147 CD 7 1 Y 1 A LYS 148 ? CE ? A LYS 147 CE 8 1 Y 1 A LYS 148 ? NZ ? A LYS 147 NZ 9 1 Y 1 A GLU 162 ? CG ? A GLU 161 CG 10 1 Y 1 A GLU 162 ? CD ? A GLU 161 CD 11 1 Y 1 A GLU 162 ? OE1 ? A GLU 161 OE1 12 1 Y 1 A GLU 162 ? OE2 ? A GLU 161 OE2 13 1 Y 1 A ASN 163 ? CG ? A ASN 162 CG 14 1 Y 1 A ASN 163 ? OD1 ? A ASN 162 OD1 15 1 Y 1 A ASN 163 ? ND2 ? A ASN 162 ND2 16 1 Y 1 A GLU 165 ? CG ? A GLU 164 CG 17 1 Y 1 A GLU 165 ? CD ? A GLU 164 CD 18 1 Y 1 A GLU 165 ? OE1 ? A GLU 164 OE1 19 1 Y 1 A GLU 165 ? OE2 ? A GLU 164 OE2 20 1 Y 1 A LYS 166 ? CG ? A LYS 165 CG 21 1 Y 1 A LYS 166 ? CD ? A LYS 165 CD 22 1 Y 1 A LYS 166 ? CE ? A LYS 165 CE 23 1 Y 1 A LYS 166 ? NZ ? A LYS 165 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A THR 149 ? A THR 148 2 1 Y 1 A GLU 150 ? A GLU 149 3 1 Y 1 A LYS 151 ? A LYS 150 4 1 Y 1 A SER 152 ? A SER 151 5 1 Y 1 A GLY 153 ? A GLY 152 6 1 Y 1 A SER 154 ? A SER 153 7 1 Y 1 A ILE 155 ? A ILE 154 8 1 Y 1 A GLY 156 ? A GLY 155 9 1 Y 1 A ALA 157 ? A ALA 156 10 1 Y 1 A ALA 158 ? A ALA 157 11 1 Y 1 A ASP 159 ? A ASP 158 12 1 Y 1 A SER 160 ? A SER 159 13 1 Y 1 A ALA 271 ? A ALA 270 14 1 Y 1 A GLU 272 ? A GLU 271 15 1 Y 1 A ASN 273 ? A ASN 272 16 1 Y 1 A LEU 274 ? A LEU 273 17 1 Y 1 A TYR 275 ? A TYR 274 18 1 Y 1 A PHE 276 ? A PHE 275 19 1 Y 1 A GLN 277 ? A GLN 276 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 EDO C1 C N N 231 EDO O1 O N N 232 EDO C2 C N N 233 EDO O2 O N N 234 EDO H11 H N N 235 EDO H12 H N N 236 EDO HO1 H N N 237 EDO H21 H N N 238 EDO H22 H N N 239 EDO HO2 H N N 240 GLN N N N N 241 GLN CA C N S 242 GLN C C N N 243 GLN O O N N 244 GLN CB C N N 245 GLN CG C N N 246 GLN CD C N N 247 GLN OE1 O N N 248 GLN NE2 N N N 249 GLN OXT O N N 250 GLN H H N N 251 GLN H2 H N N 252 GLN HA H N N 253 GLN HB2 H N N 254 GLN HB3 H N N 255 GLN HG2 H N N 256 GLN HG3 H N N 257 GLN HE21 H N N 258 GLN HE22 H N N 259 GLN HXT H N N 260 GLU N N N N 261 GLU CA C N S 262 GLU C C N N 263 GLU O O N N 264 GLU CB C N N 265 GLU CG C N N 266 GLU CD C N N 267 GLU OE1 O N N 268 GLU OE2 O N N 269 GLU OXT O N N 270 GLU H H N N 271 GLU H2 H N N 272 GLU HA H N N 273 GLU HB2 H N N 274 GLU HB3 H N N 275 GLU HG2 H N N 276 GLU HG3 H N N 277 GLU HE2 H N N 278 GLU HXT H N N 279 GLY N N N N 280 GLY CA C N N 281 GLY C C N N 282 GLY O O N N 283 GLY OXT O N N 284 GLY H H N N 285 GLY H2 H N N 286 GLY HA2 H N N 287 GLY HA3 H N N 288 GLY HXT H N N 289 HIS N N N N 290 HIS CA C N S 291 HIS C C N N 292 HIS O O N N 293 HIS CB C N N 294 HIS CG C Y N 295 HIS ND1 N Y N 296 HIS CD2 C Y N 297 HIS CE1 C Y N 298 HIS NE2 N Y N 299 HIS OXT O N N 300 HIS H H N N 301 HIS H2 H N N 302 HIS HA H N N 303 HIS HB2 H N N 304 HIS HB3 H N N 305 HIS HD1 H N N 306 HIS HD2 H N N 307 HIS HE1 H N N 308 HIS HE2 H N N 309 HIS HXT H N N 310 HOH O O N N 311 HOH H1 H N N 312 HOH H2 H N N 313 ILE N N N N 314 ILE CA C N S 315 ILE C C N N 316 ILE O O N N 317 ILE CB C N S 318 ILE CG1 C N N 319 ILE CG2 C N N 320 ILE CD1 C N N 321 ILE OXT O N N 322 ILE H H N N 323 ILE H2 H N N 324 ILE HA H N N 325 ILE HB H N N 326 ILE HG12 H N N 327 ILE HG13 H N N 328 ILE HG21 H N N 329 ILE HG22 H N N 330 ILE HG23 H N N 331 ILE HD11 H N N 332 ILE HD12 H N N 333 ILE HD13 H N N 334 ILE HXT H N N 335 LEU N N N N 336 LEU CA C N S 337 LEU C C N N 338 LEU O O N N 339 LEU CB C N N 340 LEU CG C N N 341 LEU CD1 C N N 342 LEU CD2 C N N 343 LEU OXT O N N 344 LEU H H N N 345 LEU H2 H N N 346 LEU HA H N N 347 LEU HB2 H N N 348 LEU HB3 H N N 349 LEU HG H N N 350 LEU HD11 H N N 351 LEU HD12 H N N 352 LEU HD13 H N N 353 LEU HD21 H N N 354 LEU HD22 H N N 355 LEU HD23 H N N 356 LEU HXT H N N 357 LYS N N N N 358 LYS CA C N S 359 LYS C C N N 360 LYS O O N N 361 LYS CB C N N 362 LYS CG C N N 363 LYS CD C N N 364 LYS CE C N N 365 LYS NZ N N N 366 LYS OXT O N N 367 LYS H H N N 368 LYS H2 H N N 369 LYS HA H N N 370 LYS HB2 H N N 371 LYS HB3 H N N 372 LYS HG2 H N N 373 LYS HG3 H N N 374 LYS HD2 H N N 375 LYS HD3 H N N 376 LYS HE2 H N N 377 LYS HE3 H N N 378 LYS HZ1 H N N 379 LYS HZ2 H N N 380 LYS HZ3 H N N 381 LYS HXT H N N 382 MET N N N N 383 MET CA C N S 384 MET C C N N 385 MET O O N N 386 MET CB C N N 387 MET CG C N N 388 MET SD S N N 389 MET CE C N N 390 MET OXT O N N 391 MET H H N N 392 MET H2 H N N 393 MET HA H N N 394 MET HB2 H N N 395 MET HB3 H N N 396 MET HG2 H N N 397 MET HG3 H N N 398 MET HE1 H N N 399 MET HE2 H N N 400 MET HE3 H N N 401 MET HXT H N N 402 PHE N N N N 403 PHE CA C N S 404 PHE C C N N 405 PHE O O N N 406 PHE CB C N N 407 PHE CG C Y N 408 PHE CD1 C Y N 409 PHE CD2 C Y N 410 PHE CE1 C Y N 411 PHE CE2 C Y N 412 PHE CZ C Y N 413 PHE OXT O N N 414 PHE H H N N 415 PHE H2 H N N 416 PHE HA H N N 417 PHE HB2 H N N 418 PHE HB3 H N N 419 PHE HD1 H N N 420 PHE HD2 H N N 421 PHE HE1 H N N 422 PHE HE2 H N N 423 PHE HZ H N N 424 PHE HXT H N N 425 PRO N N N N 426 PRO CA C N S 427 PRO C C N N 428 PRO O O N N 429 PRO CB C N N 430 PRO CG C N N 431 PRO CD C N N 432 PRO OXT O N N 433 PRO H H N N 434 PRO HA H N N 435 PRO HB2 H N N 436 PRO HB3 H N N 437 PRO HG2 H N N 438 PRO HG3 H N N 439 PRO HD2 H N N 440 PRO HD3 H N N 441 PRO HXT H N N 442 SER N N N N 443 SER CA C N S 444 SER C C N N 445 SER O O N N 446 SER CB C N N 447 SER OG O N N 448 SER OXT O N N 449 SER H H N N 450 SER H2 H N N 451 SER HA H N N 452 SER HB2 H N N 453 SER HB3 H N N 454 SER HG H N N 455 SER HXT H N N 456 THR N N N N 457 THR CA C N S 458 THR C C N N 459 THR O O N N 460 THR CB C N R 461 THR OG1 O N N 462 THR CG2 C N N 463 THR OXT O N N 464 THR H H N N 465 THR H2 H N N 466 THR HA H N N 467 THR HB H N N 468 THR HG1 H N N 469 THR HG21 H N N 470 THR HG22 H N N 471 THR HG23 H N N 472 THR HXT H N N 473 TRP N N N N 474 TRP CA C N S 475 TRP C C N N 476 TRP O O N N 477 TRP CB C N N 478 TRP CG C Y N 479 TRP CD1 C Y N 480 TRP CD2 C Y N 481 TRP NE1 N Y N 482 TRP CE2 C Y N 483 TRP CE3 C Y N 484 TRP CZ2 C Y N 485 TRP CZ3 C Y N 486 TRP CH2 C Y N 487 TRP OXT O N N 488 TRP H H N N 489 TRP H2 H N N 490 TRP HA H N N 491 TRP HB2 H N N 492 TRP HB3 H N N 493 TRP HD1 H N N 494 TRP HE1 H N N 495 TRP HE3 H N N 496 TRP HZ2 H N N 497 TRP HZ3 H N N 498 TRP HH2 H N N 499 TRP HXT H N N 500 TYR N N N N 501 TYR CA C N S 502 TYR C C N N 503 TYR O O N N 504 TYR CB C N N 505 TYR CG C Y N 506 TYR CD1 C Y N 507 TYR CD2 C Y N 508 TYR CE1 C Y N 509 TYR CE2 C Y N 510 TYR CZ C Y N 511 TYR OH O N N 512 TYR OXT O N N 513 TYR H H N N 514 TYR H2 H N N 515 TYR HA H N N 516 TYR HB2 H N N 517 TYR HB3 H N N 518 TYR HD1 H N N 519 TYR HD2 H N N 520 TYR HE1 H N N 521 TYR HE2 H N N 522 TYR HH H N N 523 TYR HXT H N N 524 VAL N N N N 525 VAL CA C N S 526 VAL C C N N 527 VAL O O N N 528 VAL CB C N N 529 VAL CG1 C N N 530 VAL CG2 C N N 531 VAL OXT O N N 532 VAL H H N N 533 VAL H2 H N N 534 VAL HA H N N 535 VAL HB H N N 536 VAL HG11 H N N 537 VAL HG12 H N N 538 VAL HG13 H N N 539 VAL HG21 H N N 540 VAL HG22 H N N 541 VAL HG23 H N N 542 VAL HXT H N N 543 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 EDO C1 O1 sing N N 232 EDO C1 C2 sing N N 233 EDO C1 H11 sing N N 234 EDO C1 H12 sing N N 235 EDO O1 HO1 sing N N 236 EDO C2 O2 sing N N 237 EDO C2 H21 sing N N 238 EDO C2 H22 sing N N 239 EDO O2 HO2 sing N N 240 GLN N CA sing N N 241 GLN N H sing N N 242 GLN N H2 sing N N 243 GLN CA C sing N N 244 GLN CA CB sing N N 245 GLN CA HA sing N N 246 GLN C O doub N N 247 GLN C OXT sing N N 248 GLN CB CG sing N N 249 GLN CB HB2 sing N N 250 GLN CB HB3 sing N N 251 GLN CG CD sing N N 252 GLN CG HG2 sing N N 253 GLN CG HG3 sing N N 254 GLN CD OE1 doub N N 255 GLN CD NE2 sing N N 256 GLN NE2 HE21 sing N N 257 GLN NE2 HE22 sing N N 258 GLN OXT HXT sing N N 259 GLU N CA sing N N 260 GLU N H sing N N 261 GLU N H2 sing N N 262 GLU CA C sing N N 263 GLU CA CB sing N N 264 GLU CA HA sing N N 265 GLU C O doub N N 266 GLU C OXT sing N N 267 GLU CB CG sing N N 268 GLU CB HB2 sing N N 269 GLU CB HB3 sing N N 270 GLU CG CD sing N N 271 GLU CG HG2 sing N N 272 GLU CG HG3 sing N N 273 GLU CD OE1 doub N N 274 GLU CD OE2 sing N N 275 GLU OE2 HE2 sing N N 276 GLU OXT HXT sing N N 277 GLY N CA sing N N 278 GLY N H sing N N 279 GLY N H2 sing N N 280 GLY CA C sing N N 281 GLY CA HA2 sing N N 282 GLY CA HA3 sing N N 283 GLY C O doub N N 284 GLY C OXT sing N N 285 GLY OXT HXT sing N N 286 HIS N CA sing N N 287 HIS N H sing N N 288 HIS N H2 sing N N 289 HIS CA C sing N N 290 HIS CA CB sing N N 291 HIS CA HA sing N N 292 HIS C O doub N N 293 HIS C OXT sing N N 294 HIS CB CG sing N N 295 HIS CB HB2 sing N N 296 HIS CB HB3 sing N N 297 HIS CG ND1 sing Y N 298 HIS CG CD2 doub Y N 299 HIS ND1 CE1 doub Y N 300 HIS ND1 HD1 sing N N 301 HIS CD2 NE2 sing Y N 302 HIS CD2 HD2 sing N N 303 HIS CE1 NE2 sing Y N 304 HIS CE1 HE1 sing N N 305 HIS NE2 HE2 sing N N 306 HIS OXT HXT sing N N 307 HOH O H1 sing N N 308 HOH O H2 sing N N 309 ILE N CA sing N N 310 ILE N H sing N N 311 ILE N H2 sing N N 312 ILE CA C sing N N 313 ILE CA CB sing N N 314 ILE CA HA sing N N 315 ILE C O doub N N 316 ILE C OXT sing N N 317 ILE CB CG1 sing N N 318 ILE CB CG2 sing N N 319 ILE CB HB sing N N 320 ILE CG1 CD1 sing N N 321 ILE CG1 HG12 sing N N 322 ILE CG1 HG13 sing N N 323 ILE CG2 HG21 sing N N 324 ILE CG2 HG22 sing N N 325 ILE CG2 HG23 sing N N 326 ILE CD1 HD11 sing N N 327 ILE CD1 HD12 sing N N 328 ILE CD1 HD13 sing N N 329 ILE OXT HXT sing N N 330 LEU N CA sing N N 331 LEU N H sing N N 332 LEU N H2 sing N N 333 LEU CA C sing N N 334 LEU CA CB sing N N 335 LEU CA HA sing N N 336 LEU C O doub N N 337 LEU C OXT sing N N 338 LEU CB CG sing N N 339 LEU CB HB2 sing N N 340 LEU CB HB3 sing N N 341 LEU CG CD1 sing N N 342 LEU CG CD2 sing N N 343 LEU CG HG sing N N 344 LEU CD1 HD11 sing N N 345 LEU CD1 HD12 sing N N 346 LEU CD1 HD13 sing N N 347 LEU CD2 HD21 sing N N 348 LEU CD2 HD22 sing N N 349 LEU CD2 HD23 sing N N 350 LEU OXT HXT sing N N 351 LYS N CA sing N N 352 LYS N H sing N N 353 LYS N H2 sing N N 354 LYS CA C sing N N 355 LYS CA CB sing N N 356 LYS CA HA sing N N 357 LYS C O doub N N 358 LYS C OXT sing N N 359 LYS CB CG sing N N 360 LYS CB HB2 sing N N 361 LYS CB HB3 sing N N 362 LYS CG CD sing N N 363 LYS CG HG2 sing N N 364 LYS CG HG3 sing N N 365 LYS CD CE sing N N 366 LYS CD HD2 sing N N 367 LYS CD HD3 sing N N 368 LYS CE NZ sing N N 369 LYS CE HE2 sing N N 370 LYS CE HE3 sing N N 371 LYS NZ HZ1 sing N N 372 LYS NZ HZ2 sing N N 373 LYS NZ HZ3 sing N N 374 LYS OXT HXT sing N N 375 MET N CA sing N N 376 MET N H sing N N 377 MET N H2 sing N N 378 MET CA C sing N N 379 MET CA CB sing N N 380 MET CA HA sing N N 381 MET C O doub N N 382 MET C OXT sing N N 383 MET CB CG sing N N 384 MET CB HB2 sing N N 385 MET CB HB3 sing N N 386 MET CG SD sing N N 387 MET CG HG2 sing N N 388 MET CG HG3 sing N N 389 MET SD CE sing N N 390 MET CE HE1 sing N N 391 MET CE HE2 sing N N 392 MET CE HE3 sing N N 393 MET OXT HXT sing N N 394 PHE N CA sing N N 395 PHE N H sing N N 396 PHE N H2 sing N N 397 PHE CA C sing N N 398 PHE CA CB sing N N 399 PHE CA HA sing N N 400 PHE C O doub N N 401 PHE C OXT sing N N 402 PHE CB CG sing N N 403 PHE CB HB2 sing N N 404 PHE CB HB3 sing N N 405 PHE CG CD1 doub Y N 406 PHE CG CD2 sing Y N 407 PHE CD1 CE1 sing Y N 408 PHE CD1 HD1 sing N N 409 PHE CD2 CE2 doub Y N 410 PHE CD2 HD2 sing N N 411 PHE CE1 CZ doub Y N 412 PHE CE1 HE1 sing N N 413 PHE CE2 CZ sing Y N 414 PHE CE2 HE2 sing N N 415 PHE CZ HZ sing N N 416 PHE OXT HXT sing N N 417 PRO N CA sing N N 418 PRO N CD sing N N 419 PRO N H sing N N 420 PRO CA C sing N N 421 PRO CA CB sing N N 422 PRO CA HA sing N N 423 PRO C O doub N N 424 PRO C OXT sing N N 425 PRO CB CG sing N N 426 PRO CB HB2 sing N N 427 PRO CB HB3 sing N N 428 PRO CG CD sing N N 429 PRO CG HG2 sing N N 430 PRO CG HG3 sing N N 431 PRO CD HD2 sing N N 432 PRO CD HD3 sing N N 433 PRO OXT HXT sing N N 434 SER N CA sing N N 435 SER N H sing N N 436 SER N H2 sing N N 437 SER CA C sing N N 438 SER CA CB sing N N 439 SER CA HA sing N N 440 SER C O doub N N 441 SER C OXT sing N N 442 SER CB OG sing N N 443 SER CB HB2 sing N N 444 SER CB HB3 sing N N 445 SER OG HG sing N N 446 SER OXT HXT sing N N 447 THR N CA sing N N 448 THR N H sing N N 449 THR N H2 sing N N 450 THR CA C sing N N 451 THR CA CB sing N N 452 THR CA HA sing N N 453 THR C O doub N N 454 THR C OXT sing N N 455 THR CB OG1 sing N N 456 THR CB CG2 sing N N 457 THR CB HB sing N N 458 THR OG1 HG1 sing N N 459 THR CG2 HG21 sing N N 460 THR CG2 HG22 sing N N 461 THR CG2 HG23 sing N N 462 THR OXT HXT sing N N 463 TRP N CA sing N N 464 TRP N H sing N N 465 TRP N H2 sing N N 466 TRP CA C sing N N 467 TRP CA CB sing N N 468 TRP CA HA sing N N 469 TRP C O doub N N 470 TRP C OXT sing N N 471 TRP CB CG sing N N 472 TRP CB HB2 sing N N 473 TRP CB HB3 sing N N 474 TRP CG CD1 doub Y N 475 TRP CG CD2 sing Y N 476 TRP CD1 NE1 sing Y N 477 TRP CD1 HD1 sing N N 478 TRP CD2 CE2 doub Y N 479 TRP CD2 CE3 sing Y N 480 TRP NE1 CE2 sing Y N 481 TRP NE1 HE1 sing N N 482 TRP CE2 CZ2 sing Y N 483 TRP CE3 CZ3 doub Y N 484 TRP CE3 HE3 sing N N 485 TRP CZ2 CH2 doub Y N 486 TRP CZ2 HZ2 sing N N 487 TRP CZ3 CH2 sing Y N 488 TRP CZ3 HZ3 sing N N 489 TRP CH2 HH2 sing N N 490 TRP OXT HXT sing N N 491 TYR N CA sing N N 492 TYR N H sing N N 493 TYR N H2 sing N N 494 TYR CA C sing N N 495 TYR CA CB sing N N 496 TYR CA HA sing N N 497 TYR C O doub N N 498 TYR C OXT sing N N 499 TYR CB CG sing N N 500 TYR CB HB2 sing N N 501 TYR CB HB3 sing N N 502 TYR CG CD1 doub Y N 503 TYR CG CD2 sing Y N 504 TYR CD1 CE1 sing Y N 505 TYR CD1 HD1 sing N N 506 TYR CD2 CE2 doub Y N 507 TYR CD2 HD2 sing N N 508 TYR CE1 CZ doub Y N 509 TYR CE1 HE1 sing N N 510 TYR CE2 CZ sing Y N 511 TYR CE2 HE2 sing N N 512 TYR CZ OH sing N N 513 TYR OH HH sing N N 514 TYR OXT HXT sing N N 515 VAL N CA sing N N 516 VAL N H sing N N 517 VAL N H2 sing N N 518 VAL CA C sing N N 519 VAL CA CB sing N N 520 VAL CA HA sing N N 521 VAL C O doub N N 522 VAL C OXT sing N N 523 VAL CB CG1 sing N N 524 VAL CB CG2 sing N N 525 VAL CB HB sing N N 526 VAL CG1 HG11 sing N N 527 VAL CG1 HG12 sing N N 528 VAL CG1 HG13 sing N N 529 VAL CG2 HG21 sing N N 530 VAL CG2 HG22 sing N N 531 VAL CG2 HG23 sing N N 532 VAL OXT HXT sing N N 533 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6OEB 'double helix' 6OEB 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 1 1_555 C DG 6 1_555 -0.053 -0.188 0.327 -8.051 -9.408 -1.887 1 B_DC1:DG6_C B 1 ? C 6 ? 19 1 1 B DC 2 1_555 C DG 5 1_555 0.144 -0.079 -0.083 3.564 -3.190 -2.896 2 B_DC2:DG5_C B 2 ? C 5 ? 19 1 1 B DA 3 1_555 C DT 4 1_555 -0.195 -0.250 -0.207 -0.098 -12.126 1.187 3 B_DA3:DT4_C B 3 ? C 4 ? 20 1 1 B DG 4 1_555 C DC 3 1_555 -0.042 -0.118 -0.080 0.572 -10.847 4.611 4 B_DG4:DC3_C B 4 ? C 3 ? 19 1 1 B DA 5 1_555 C DT 2 1_555 -0.015 -0.168 0.101 4.594 -7.413 2.176 5 B_DA5:DT2_C B 5 ? C 2 ? 20 1 1 B DC 6 1_555 C DG 1 1_555 0.070 -0.127 -0.337 18.490 -5.336 0.716 6 B_DC6:DG1_C B 6 ? C 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 1 1_555 C DG 6 1_555 B DC 2 1_555 C DG 5 1_555 -0.339 -0.334 3.033 4.720 4.040 34.435 -1.114 1.215 2.906 6.756 -7.893 34.975 1 BB_DC1DC2:DG5DG6_CC B 1 ? C 6 ? B 2 ? C 5 ? 1 B DC 2 1_555 C DG 5 1_555 B DA 3 1_555 C DT 4 1_555 -0.039 0.170 3.412 1.695 3.409 35.837 -0.231 0.315 3.408 5.520 -2.746 36.032 2 BB_DC2DA3:DT4DG5_CC B 2 ? C 5 ? B 3 ? C 4 ? 1 B DA 3 1_555 C DT 4 1_555 B DG 4 1_555 C DC 3 1_555 0.692 0.260 3.309 -1.163 1.727 35.228 0.171 -1.315 3.294 2.851 1.919 35.287 3 BB_DA3DG4:DC3DT4_CC B 3 ? C 4 ? B 4 ? C 3 ? 1 B DG 4 1_555 C DC 3 1_555 B DA 5 1_555 C DT 2 1_555 -0.117 0.122 3.173 -1.255 -3.946 37.878 0.671 0.024 3.147 -6.057 1.926 38.095 4 BB_DG4DA5:DT2DC3_CC B 4 ? C 3 ? B 5 ? C 2 ? 1 B DA 5 1_555 C DT 2 1_555 B DC 6 1_555 C DG 1 1_555 0.521 -0.540 3.016 2.721 1.620 29.621 -1.364 -0.488 3.018 3.157 -5.302 29.786 5 BB_DA5DC6:DG1DT2_CC B 5 ? C 2 ? B 6 ? C 1 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 1,2-ETHANEDIOL EDO 5 'UNKNOWN ATOM OR ION' UNX 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5KO9 _pdbx_initial_refinement_model.details 'PDB entry 5KO9' # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'native gel electrophoresis' _pdbx_struct_assembly_auth_evidence.details ? #