HEADER SIGNALING PROTEIN/INHIBITOR 19-JUN-19 6PDJ TITLE TYROSINE-PROTEIN KINASE LCK BOUND TO COMPOUND 11 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE LCK; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: LEUKOCYTE C-TERMINAL SRC KINASE,LSK,LYMPHOCYTE CELL-SPECIFIC COMPND 5 PROTEIN-TYROSINE KINASE,PROTEIN YT16,PROTO-ONCOGENE LCK,T CELL- COMPND 6 SPECIFIC PROTEIN-TYROSINE KINASE,P56-LCK; COMPND 7 EC: 2.7.10.2; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: LCK; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS INHIBITOR, SIGNALING PROTEIN, SIGNALING PROTEIN-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.A.CRITTON REVDAT 4 15-NOV-23 6PDJ 1 REMARK REVDAT 3 11-OCT-23 6PDJ 1 REMARK LINK REVDAT 2 30-OCT-19 6PDJ 1 JRNL REVDAT 1 09-OCT-19 6PDJ 0 JRNL AUTH D.P.O'MALLEY,V.AHUJA,B.FINK,C.CAO,C.WANG,J.SWANSON,S.WEE, JRNL AUTH 2 A.V.GAVAI,J.TOKARSKI,D.CRITTON,A.A.PAIVA,B.M.JOHNSON, JRNL AUTH 3 N.SZAPIEL,D.XIE JRNL TITL DISCOVERY OF PYRIDAZINONE AND PYRAZOLO[1,5-A]PYRIDINE JRNL TITL 2 INHIBITORS OF C-TERMINAL SRC KINASE. JRNL REF ACS MED.CHEM.LETT. V. 10 1486 2019 JRNL REFN ISSN 1948-5875 JRNL PMID 31620238 JRNL DOI 10.1021/ACSMEDCHEMLETT.9B00354 REMARK 2 REMARK 2 RESOLUTION. 1.81 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.81 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.13 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 69.6 REMARK 3 NUMBER OF REFLECTIONS : 21199 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1039 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 50 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.81 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.90 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 11.13 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 424 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2105 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 404 REMARK 3 BIN R VALUE (WORKING SET) : 0.2082 REMARK 3 BIN FREE R VALUE : 0.2558 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.72 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 20 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2178 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 59 REMARK 3 SOLVENT ATOMS : 291 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.04 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.96100 REMARK 3 B22 (A**2) : -0.72880 REMARK 3 B33 (A**2) : -1.23220 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.240 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.184 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.161 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.163 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.153 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2300 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3128 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 778 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 414 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2300 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 290 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2898 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.06 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.57 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.28 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 2.7944 -6.6579 -16.1656 REMARK 3 T TENSOR REMARK 3 T11: -0.0199 T22: -0.0235 REMARK 3 T33: -0.0629 T12: 0.0005 REMARK 3 T13: -0.0071 T23: 0.0040 REMARK 3 L TENSOR REMARK 3 L11: 0.2834 L22: 1.7413 REMARK 3 L33: 0.3761 L12: -0.0109 REMARK 3 L13: -0.0678 L23: 0.3743 REMARK 3 S TENSOR REMARK 3 S11: -0.0159 S12: -0.0866 S13: -0.0353 REMARK 3 S21: 0.2056 S22: 0.0174 S23: -0.0830 REMARK 3 S31: 0.0374 S32: 0.0291 S33: -0.0016 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6PDJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JUN-19. REMARK 100 THE DEPOSITION ID IS D_1000242365. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-AUG-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 10.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : KIRKPATRICK-BAEZ MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 136656 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.810 REMARK 200 RESOLUTION RANGE LOW (A) : 38.984 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.8 REMARK 200 DATA REDUNDANCY : 6.460 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.81 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.98 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1QPJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 M AMMONIUM SULFATE, 120 MM LITHIUM REMARK 280 CHLORIDE, 10 MM NICKEL(II) CHLORIDE, 100 MM CAPS PH 10.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.00800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.26350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.08150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.26350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.00800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.08150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 226 REMARK 465 GLN A 227 REMARK 465 LYS A 228 REMARK 465 PRO A 229 REMARK 465 GLN A 230 REMARK 465 THR A 501 REMARK 465 GLU A 502 REMARK 465 GLY A 503 REMARK 465 GLN A 504 REMARK 465 TYR A 505 REMARK 465 GLN A 506 REMARK 465 PRO A 507 REMARK 465 GLN A 508 REMARK 465 PRO A 509 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 237 CG CD OE1 OE2 REMARK 470 GLN A 255 CG CD OE1 NE2 REMARK 470 LYS A 273 CD CE NZ REMARK 470 LYS A 276 CG CD CE NZ REMARK 470 ASP A 283 CG OD1 OD2 REMARK 470 GLU A 288 CG CD OE1 OE2 REMARK 470 GLN A 309 CG CD OE1 NE2 REMARK 470 GLU A 390 CD OE1 OE2 REMARK 470 ASN A 392 CG OD1 ND2 REMARK 470 ARG A 397 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 398 CG CD OE1 OE2 REMARK 470 LYS A 401 CG CD CE NZ REMARK 470 ARG A 438 CD NE CZ NH1 NH2 REMARK 470 GLN A 451 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASN A 290 C - N - CA ANGL. DEV. = 19.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 290 108.51 163.47 REMARK 500 ARG A 363 -1.78 72.74 REMARK 500 ASP A 364 45.27 -149.29 REMARK 500 ASN A 392 -10.70 84.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 988 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A 989 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A 990 DISTANCE = 6.13 ANGSTROMS REMARK 525 HOH A 991 DISTANCE = 6.59 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 605 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 222 N REMARK 620 2 HIS A 223 N 81.7 REMARK 620 3 HIS A 223 ND1 170.1 88.5 REMARK 620 4 HIS A 436 NE2 75.8 90.7 102.7 REMARK 620 5 HOH A 723 O 91.5 89.1 90.1 167.2 REMARK 620 6 HOH A 862 O 89.7 84.3 87.6 16.3 173.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ODJ A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CXS A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 605 DBREF 6PDJ A 225 509 UNP P06239 LCK_HUMAN 225 509 SEQADV 6PDJ GLY A 222 UNP P06239 EXPRESSION TAG SEQADV 6PDJ HIS A 223 UNP P06239 EXPRESSION TAG SEQADV 6PDJ MET A 224 UNP P06239 EXPRESSION TAG SEQRES 1 A 288 GLY HIS MET GLN THR GLN LYS PRO GLN LYS PRO TRP TRP SEQRES 2 A 288 GLU ASP GLU TRP GLU VAL PRO ARG GLU THR LEU LYS LEU SEQRES 3 A 288 VAL GLU ARG LEU GLY ALA GLY GLN PHE GLY GLU VAL TRP SEQRES 4 A 288 MET GLY TYR TYR ASN GLY HIS THR LYS VAL ALA VAL LYS SEQRES 5 A 288 SER LEU LYS GLN GLY SER MET SER PRO ASP ALA PHE LEU SEQRES 6 A 288 ALA GLU ALA ASN LEU MET LYS GLN LEU GLN HIS GLN ARG SEQRES 7 A 288 LEU VAL ARG LEU TYR ALA VAL VAL THR GLN GLU PRO ILE SEQRES 8 A 288 TYR ILE ILE THR GLU TYR MET GLU ASN GLY SER LEU VAL SEQRES 9 A 288 ASP PHE LEU LYS THR PRO SER GLY ILE LYS LEU THR ILE SEQRES 10 A 288 ASN LYS LEU LEU ASP MET ALA ALA GLN ILE ALA GLU GLY SEQRES 11 A 288 MET ALA PHE ILE GLU GLU ARG ASN TYR ILE HIS ARG ASP SEQRES 12 A 288 LEU ARG ALA ALA ASN ILE LEU VAL SER ASP THR LEU SER SEQRES 13 A 288 CYS LYS ILE ALA ASP PHE GLY LEU ALA ARG LEU ILE GLU SEQRES 14 A 288 ASP ASN GLU PTR THR ALA ARG GLU GLY ALA LYS PHE PRO SEQRES 15 A 288 ILE LYS TRP THR ALA PRO GLU ALA ILE ASN TYR GLY THR SEQRES 16 A 288 PHE THR ILE LYS SER ASP VAL TRP SER PHE GLY ILE LEU SEQRES 17 A 288 LEU THR GLU ILE VAL THR HIS GLY ARG ILE PRO TYR PRO SEQRES 18 A 288 GLY MET THR ASN PRO GLU VAL ILE GLN ASN LEU GLU ARG SEQRES 19 A 288 GLY TYR ARG MET VAL ARG PRO ASP ASN CYS PRO GLU GLU SEQRES 20 A 288 LEU TYR GLN LEU MET ARG LEU CYS TRP LYS GLU ARG PRO SEQRES 21 A 288 GLU ASP ARG PRO THR PHE ASP TYR LEU ARG SER VAL LEU SEQRES 22 A 288 GLU ASP PHE PHE THR ALA THR GLU GLY GLN TYR GLN PRO SEQRES 23 A 288 GLN PRO MODRES 6PDJ PTR A 394 TYR MODIFIED RESIDUE HET PTR A 394 16 HET ODJ A 601 34 HET CXS A 602 14 HET SO4 A 603 5 HET SO4 A 604 5 HET NI A 605 1 HETNAM PTR O-PHOSPHOTYROSINE HETNAM ODJ N-{4-[(6-METHOXYPYRAZOLO[1,5-A]PYRIDINE-3-CARBONYL) HETNAM 2 ODJ AMINO]-3-METHYLPHENYL}-1-METHYL-1H-INDAZOLE-3- HETNAM 3 ODJ CARBOXAMIDE HETNAM CXS 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID HETNAM SO4 SULFATE ION HETNAM NI NICKEL (II) ION HETSYN PTR PHOSPHONOTYROSINE FORMUL 1 PTR C9 H12 N O6 P FORMUL 2 ODJ C25 H22 N6 O3 FORMUL 3 CXS C9 H19 N O3 S FORMUL 4 SO4 2(O4 S 2-) FORMUL 6 NI NI 2+ FORMUL 7 HOH *291(H2 O) HELIX 1 AA1 PRO A 241 GLU A 243 5 3 HELIX 2 AA2 SER A 281 LEU A 286 1 6 HELIX 3 AA3 ASN A 290 LEU A 295 1 6 HELIX 4 AA4 SER A 323 LEU A 328 1 6 HELIX 5 AA5 THR A 330 LYS A 335 1 6 HELIX 6 AA6 THR A 337 ARG A 358 1 22 HELIX 7 AA7 ARG A 366 ALA A 368 5 3 HELIX 8 AA8 PRO A 403 THR A 407 5 5 HELIX 9 AA9 ALA A 408 GLY A 415 1 8 HELIX 10 AB1 THR A 418 THR A 435 1 18 HELIX 11 AB2 THR A 445 ARG A 455 1 11 HELIX 12 AB3 PRO A 466 TRP A 477 1 12 HELIX 13 AB4 ARG A 480 ARG A 484 5 5 HELIX 14 AB5 THR A 486 ALA A 500 1 15 SHEET 1 AA1 5 LEU A 245 ALA A 253 0 SHEET 2 AA1 5 GLY A 257 TYR A 264 -1 O VAL A 259 N LEU A 251 SHEET 3 AA1 5 THR A 268 LEU A 275 -1 O VAL A 270 N GLY A 262 SHEET 4 AA1 5 TYR A 313 GLU A 317 -1 O ILE A 314 N LYS A 273 SHEET 5 AA1 5 LEU A 303 VAL A 307 -1 N ALA A 305 O ILE A 315 SHEET 1 AA2 2 TYR A 360 ILE A 361 0 SHEET 2 AA2 2 ARG A 387 LEU A 388 -1 O ARG A 387 N ILE A 361 SHEET 1 AA3 2 ILE A 370 VAL A 372 0 SHEET 2 AA3 2 CYS A 378 ILE A 380 -1 O LYS A 379 N LEU A 371 SHEET 1 AA4 2 PTR A 394 THR A 395 0 SHEET 2 AA4 2 THR A 416 PHE A 417 -1 O PHE A 417 N PTR A 394 LINK C GLU A 393 N PTR A 394 1555 1555 1.36 LINK C PTR A 394 N THR A 395 1555 1555 1.35 LINK N GLY A 222 NI NI A 605 1555 1555 2.09 LINK N HIS A 223 NI NI A 605 1555 1555 2.18 LINK ND1 HIS A 223 NI NI A 605 1555 1555 2.10 LINK NE2 HIS A 436 NI NI A 605 1555 3544 2.33 LINK NI NI A 605 O HOH A 723 1555 3554 2.59 LINK NI NI A 605 O HOH A 862 1555 1555 2.39 CISPEP 1 ALA A 289 ASN A 290 0 -6.24 CISPEP 2 GLU A 310 PRO A 311 0 1.85 SITE 1 AC1 19 LEU A 251 ALA A 271 LYS A 273 PHE A 285 SITE 2 AC1 19 ASN A 290 ILE A 314 THR A 316 GLU A 317 SITE 3 AC1 19 TYR A 318 MET A 319 GLU A 320 GLY A 322 SITE 4 AC1 19 LEU A 371 ASP A 382 PHE A 383 GLY A 384 SITE 5 AC1 19 HOH A 712 HOH A 802 HOH A 857 SITE 1 AC2 4 TYR A 264 TYR A 304 GLU A 467 HOH A 728 SITE 1 AC3 9 GLN A 298 ARG A 299 SER A 377 LYS A 379 SITE 2 AC3 9 TYR A 457 ARG A 458 HOH A 715 HOH A 722 SITE 3 AC3 9 HOH A 795 SITE 1 AC4 7 THR A 330 PRO A 331 SER A 332 ARG A 358 SITE 2 AC4 7 HOH A 762 HOH A 771 HOH A 819 SITE 1 AC5 5 GLY A 222 HIS A 223 HIS A 436 HOH A 723 SITE 2 AC5 5 HOH A 862 CRYST1 42.016 74.163 104.527 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023800 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013484 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009567 0.00000