HEADER DE NOVO PROTEIN 09-DEC-18 6Q5P TITLE CRYSTAL STRUCTURE OF A CC-HEX MUTANT THAT FORMS A PARALLEL SIX-HELIX TITLE 2 COILED COIL CC-HEX*-II COMPND MOL_ID: 1; COMPND 2 MOLECULE: CC-HEX*-II; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630 KEYWDS COILED COIL, HEXAMER, SYNTHETIC, PARALLEL, CC-HEX, DE NOVO PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.G.RHYS,C.W.WOOD,J.L.BEESLEY,R.L.BRADY,D.N.WOOLFSON REVDAT 2 19-JUN-19 6Q5P 1 JRNL REVDAT 1 22-MAY-19 6Q5P 0 JRNL AUTH G.G.RHYS,C.W.WOOD,J.L.BEESLEY,N.R.ZACCAI,A.J.BURTON, JRNL AUTH 2 R.L.BRADY,A.R.THOMSON,D.N.WOOLFSON JRNL TITL NAVIGATING THE STRUCTURAL LANDSCAPE OF DE NOVO ALPHA-HELICAL JRNL TITL 2 BUNDLES. JRNL REF J.AM.CHEM.SOC. V. 141 8787 2019 JRNL REFN ESSN 1520-5126 JRNL PMID 31066556 JRNL DOI 10.1021/JACS.8B13354 REMARK 2 REMARK 2 RESOLUTION. 1.44 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.44 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.41 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 31709 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.171 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1680 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.44 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.48 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2319 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.55 REMARK 3 BIN R VALUE (WORKING SET) : 0.3010 REMARK 3 BIN FREE R VALUE SET COUNT : 122 REMARK 3 BIN FREE R VALUE : 0.3040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1366 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 185 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.16000 REMARK 3 B22 (A**2) : -0.16000 REMARK 3 B33 (A**2) : 0.53000 REMARK 3 B12 (A**2) : -0.08000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.062 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.058 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.047 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.653 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.976 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.973 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1510 ; 0.009 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1596 ; 0.001 ; 0.018 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2028 ; 1.398 ; 1.629 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3721 ; 1.484 ; 1.588 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 196 ; 3.410 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 54 ;38.534 ;26.852 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 325 ;11.735 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 228 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1674 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 242 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 780 ; 2.533 ; 1.395 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 778 ; 2.513 ; 1.387 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 980 ; 3.221 ; 2.039 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 980 ; 3.227 ; 2.038 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 730 ; 4.170 ; 1.767 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 727 ; 4.141 ; 1.761 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1043 ; 6.037 ; 2.467 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 1947 ; 7.224 ;19.152 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 1948 ; 7.222 ;19.174 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 15 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 1 30 B 1 30 822 0.13 0.05 REMARK 3 2 A 1 30 C 1 30 812 0.16 0.05 REMARK 3 3 A 1 30 D 1 30 805 0.14 0.05 REMARK 3 4 A 1 30 E 1 30 823 0.13 0.05 REMARK 3 5 A 1 30 F 1 30 826 0.13 0.05 REMARK 3 6 B 1 30 C 1 30 852 0.14 0.05 REMARK 3 7 B 1 30 D 1 30 854 0.13 0.05 REMARK 3 8 B 1 30 E 1 30 854 0.12 0.05 REMARK 3 9 B 1 30 F 1 30 857 0.12 0.05 REMARK 3 10 C 1 30 D 1 30 931 0.09 0.05 REMARK 3 11 C 1 30 E 1 30 887 0.13 0.05 REMARK 3 12 C 1 30 F 1 30 902 0.13 0.05 REMARK 3 13 D 1 30 E 1 30 812 0.15 0.05 REMARK 3 14 D 1 30 F 1 30 813 0.13 0.05 REMARK 3 15 E 1 30 F 1 30 967 0.08 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 30 REMARK 3 ORIGIN FOR THE GROUP (A): 23.7020 -12.4930 -12.6950 REMARK 3 T TENSOR REMARK 3 T11: 0.0312 T22: 0.0623 REMARK 3 T33: 0.0328 T12: 0.0028 REMARK 3 T13: -0.0071 T23: 0.0040 REMARK 3 L TENSOR REMARK 3 L11: 1.5241 L22: 1.8235 REMARK 3 L33: 5.7262 L12: -0.3263 REMARK 3 L13: 0.4935 L23: 2.3973 REMARK 3 S TENSOR REMARK 3 S11: -0.0810 S12: -0.2179 S13: -0.0156 REMARK 3 S21: 0.1201 S22: -0.0165 S23: 0.0508 REMARK 3 S31: 0.1791 S32: 0.0417 S33: 0.0975 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 30 REMARK 3 ORIGIN FOR THE GROUP (A): 31.2910 -7.9160 -17.4910 REMARK 3 T TENSOR REMARK 3 T11: 0.0177 T22: 0.1128 REMARK 3 T33: 0.1076 T12: 0.0141 REMARK 3 T13: 0.0047 T23: -0.0280 REMARK 3 L TENSOR REMARK 3 L11: 1.7152 L22: 0.5333 REMARK 3 L33: 6.4876 L12: -0.6409 REMARK 3 L13: 1.1408 L23: 0.5429 REMARK 3 S TENSOR REMARK 3 S11: -0.0772 S12: -0.0351 S13: 0.2384 REMARK 3 S21: 0.0294 S22: -0.0913 S23: -0.0637 REMARK 3 S31: 0.0486 S32: 0.0837 S33: 0.1685 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 30 REMARK 3 ORIGIN FOR THE GROUP (A): 15.3320 -9.5280 -21.2760 REMARK 3 T TENSOR REMARK 3 T11: 0.0287 T22: 0.0379 REMARK 3 T33: 0.0429 T12: 0.0014 REMARK 3 T13: -0.0145 T23: -0.0101 REMARK 3 L TENSOR REMARK 3 L11: 1.6730 L22: 1.4553 REMARK 3 L33: 8.5562 L12: 0.0538 REMARK 3 L13: 1.7774 L23: 2.9805 REMARK 3 S TENSOR REMARK 3 S11: 0.0868 S12: -0.0772 S13: -0.0508 REMARK 3 S21: -0.0248 S22: 0.0170 S23: 0.0599 REMARK 3 S31: 0.1009 S32: 0.0127 S33: -0.1038 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 30 REMARK 3 ORIGIN FOR THE GROUP (A): 24.1670 -2.2820 -20.0130 REMARK 3 T TENSOR REMARK 3 T11: 0.0251 T22: 0.0442 REMARK 3 T33: 0.0693 T12: -0.0079 REMARK 3 T13: 0.0170 T23: -0.0309 REMARK 3 L TENSOR REMARK 3 L11: 2.0079 L22: 1.1188 REMARK 3 L33: 7.3657 L12: -0.0043 REMARK 3 L13: 2.4843 L23: 1.5836 REMARK 3 S TENSOR REMARK 3 S11: 0.0034 S12: -0.0719 S13: 0.2778 REMARK 3 S21: -0.0554 S22: -0.0842 S23: -0.0797 REMARK 3 S31: -0.0514 S32: 0.0203 S33: 0.0808 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 1 E 30 REMARK 3 ORIGIN FOR THE GROUP (A): 15.9060 2.9090 -21.6360 REMARK 3 T TENSOR REMARK 3 T11: 0.0468 T22: 0.0275 REMARK 3 T33: 0.0862 T12: 0.0083 REMARK 3 T13: 0.0021 T23: -0.0249 REMARK 3 L TENSOR REMARK 3 L11: 2.3913 L22: 1.6150 REMARK 3 L33: 7.1286 L12: 0.7192 REMARK 3 L13: 3.2156 L23: 2.3208 REMARK 3 S TENSOR REMARK 3 S11: -0.0342 S12: -0.0560 S13: 0.2847 REMARK 3 S21: -0.0447 S22: -0.0129 S23: 0.0112 REMARK 3 S31: -0.1016 S32: -0.0056 S33: 0.0472 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 1 F 30 REMARK 3 ORIGIN FOR THE GROUP (A): 8.3740 -2.8260 -18.8910 REMARK 3 T TENSOR REMARK 3 T11: 0.0401 T22: 0.1236 REMARK 3 T33: 0.1003 T12: -0.0119 REMARK 3 T13: -0.0399 T23: 0.0372 REMARK 3 L TENSOR REMARK 3 L11: 3.0367 L22: 1.9032 REMARK 3 L33: 6.2347 L12: 1.1137 REMARK 3 L13: 2.4510 L23: 3.2639 REMARK 3 S TENSOR REMARK 3 S11: 0.0578 S12: -0.2973 S13: 0.0653 REMARK 3 S21: -0.0713 S22: 0.0177 S23: 0.0741 REMARK 3 S31: -0.0227 S32: -0.1883 S33: -0.0756 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.00 REMARK 3 ION PROBE RADIUS : 0.70 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6Q5P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-DEC-18. REMARK 100 THE DEPOSITION ID IS D_1200012752. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9163 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS 1.11.4-G9C616A499-RELEASE REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33440 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.440 REMARK 200 RESOLUTION RANGE LOW (A) : 82.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 19.90 REMARK 200 R MERGE (I) : 0.14300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.44 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 19.00 REMARK 200 R MERGE FOR SHELL (I) : 3.71200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.2 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM SPG BUFFER (SUCCINIC ACID, REMARK 280 SODIUM PHOSPHATE MONOBASIC MONOHYDRATE, GLYCINE), 25 % W/V REMARK 280 PEG1500, PH 8.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 41.30800 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 41.30800 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 41.30800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -113.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 P PO4 A 101 LIES ON A SPECIAL POSITION. REMARK 375 O2 PO4 A 101 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 208 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 217 LIES ON A SPECIAL POSITION. REMARK 375 HOH F 132 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ACE A 0 REMARK 465 ACE B 0 REMARK 465 NH2 D 31 REMARK 465 NH2 E 31 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 220 O HOH B 227 1.64 REMARK 500 O HOH D 129 O HOH D 133 1.93 REMARK 500 O HOH F 115 O HOH F 127 2.11 REMARK 500 O HOH D 113 O HOH D 128 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH E 234 DISTANCE = 5.94 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 E 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide GLY B 30 and NH2 B REMARK 800 31 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide ACE C 0 and GLY C 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide GLY C 30 and NH2 C REMARK 800 31 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide ACE D 0 and GLY D 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide ACE E 0 and GLY E 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide ACE F 0 and GLY F 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide GLY F 30 and NH2 F REMARK 800 31 DBREF 6Q5P A 0 31 PDB 6Q5P 6Q5P 0 31 DBREF 6Q5P B 0 31 PDB 6Q5P 6Q5P 0 31 DBREF 6Q5P C 0 31 PDB 6Q5P 6Q5P 0 31 DBREF 6Q5P D 0 31 PDB 6Q5P 6Q5P 0 31 DBREF 6Q5P E 0 31 PDB 6Q5P 6Q5P 0 31 DBREF 6Q5P F 0 31 PDB 6Q5P 6Q5P 0 31 SEQRES 1 A 32 ACE GLY GLU ILE LYS ALA ILE ALA GLN GLU ILE LYS ALA SEQRES 2 A 32 ILE ALA LYS GLU ILE LYS ALA ILE ALA TRP GLU ILE LYS SEQRES 3 A 32 ALA ILE ALA GLN GLY NH2 SEQRES 1 B 32 ACE GLY GLU ILE LYS ALA ILE ALA GLN GLU ILE LYS ALA SEQRES 2 B 32 ILE ALA LYS GLU ILE LYS ALA ILE ALA TRP GLU ILE LYS SEQRES 3 B 32 ALA ILE ALA GLN GLY NH2 SEQRES 1 C 32 ACE GLY GLU ILE LYS ALA ILE ALA GLN GLU ILE LYS ALA SEQRES 2 C 32 ILE ALA LYS GLU ILE LYS ALA ILE ALA TRP GLU ILE LYS SEQRES 3 C 32 ALA ILE ALA GLN GLY NH2 SEQRES 1 D 32 ACE GLY GLU ILE LYS ALA ILE ALA GLN GLU ILE LYS ALA SEQRES 2 D 32 ILE ALA LYS GLU ILE LYS ALA ILE ALA TRP GLU ILE LYS SEQRES 3 D 32 ALA ILE ALA GLN GLY NH2 SEQRES 1 E 32 ACE GLY GLU ILE LYS ALA ILE ALA GLN GLU ILE LYS ALA SEQRES 2 E 32 ILE ALA LYS GLU ILE LYS ALA ILE ALA TRP GLU ILE LYS SEQRES 3 E 32 ALA ILE ALA GLN GLY NH2 SEQRES 1 F 32 ACE GLY GLU ILE LYS ALA ILE ALA GLN GLU ILE LYS ALA SEQRES 2 F 32 ILE ALA LYS GLU ILE LYS ALA ILE ALA TRP GLU ILE LYS SEQRES 3 F 32 ALA ILE ALA GLN GLY NH2 HET NH2 A 31 1 HET NH2 B 31 1 HET ACE C 0 3 HET NH2 C 31 1 HET ACE D 0 3 HET ACE E 0 3 HET ACE F 0 3 HET NH2 F 31 1 HET PO4 A 101 5 HET GOL B 101 6 HET PO4 E 101 5 HETNAM NH2 AMINO GROUP HETNAM ACE ACETYL GROUP HETNAM PO4 PHOSPHATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 NH2 4(H2 N) FORMUL 3 ACE 4(C2 H4 O) FORMUL 7 PO4 2(O4 P 3-) FORMUL 8 GOL C3 H8 O3 FORMUL 10 HOH *185(H2 O) HELIX 1 AA1 GLY A 1 GLY A 30 1 30 HELIX 2 AA2 GLU B 2 GLY B 30 1 29 HELIX 3 AA3 GLY C 1 GLY C 30 1 30 HELIX 4 AA4 GLY D 1 GLY D 30 1 30 HELIX 5 AA5 GLY E 1 GLY E 30 1 30 HELIX 6 AA6 GLY F 1 GLY F 30 1 30 LINK C GLY A 30 N NH2 A 31 1555 1555 1.25 LINK C GLY B 30 N NH2 B 31 1555 1555 1.25 LINK C ACE C 0 N GLY C 1 1555 1555 1.33 LINK C GLY C 30 N NH2 C 31 1555 1555 1.25 LINK C ACE D 0 N GLY D 1 1555 1555 1.33 LINK C ACE E 0 N GLY E 1 1555 1555 1.34 LINK C ACE F 0 N GLY F 1 1555 1555 1.31 LINK C GLY F 30 N NH2 F 31 1555 1555 1.22 SITE 1 AC1 1 LYS A 15 SITE 1 AC2 5 TRP B 22 LYS B 25 HOH B 214 TRP C 22 SITE 2 AC2 5 LYS C 25 SITE 1 AC3 5 LYS E 11 LYS E 15 HOH E 215 GLU F 9 SITE 2 AC3 5 LYS F 18 SITE 1 AC4 4 ALA B 26 ILE B 27 ALA B 28 GLN B 29 SITE 1 AC5 8 ILE A 6 GLU C 2 ILE C 3 LYS C 4 SITE 2 AC5 8 ALA C 5 GLY C 30 NH2 C 31 HOH C 109 SITE 1 AC6 9 ACE C 0 GLY C 1 GLU C 2 ILE C 3 SITE 2 AC6 9 ALA C 26 ILE C 27 ALA C 28 GLN C 29 SITE 3 AC6 9 HOH C 123 SITE 1 AC7 6 GLN C 29 GLU D 2 ILE D 3 LYS D 4 SITE 2 AC7 6 ALA D 5 HOH D 109 SITE 1 AC8 6 HOH C 106 GLU E 2 ILE E 3 LYS E 4 SITE 2 AC8 6 ALA E 5 HOH E 202 SITE 1 AC9 10 ILE C 27 ALA D 28 HOH D 119 ILE E 27 SITE 2 AC9 10 ALA E 28 GLY E 30 GLU F 2 ILE F 3 SITE 3 AC9 10 LYS F 4 ALA F 5 SITE 1 AD1 4 ALA F 26 ILE F 27 ALA F 28 GLN F 29 CRYST1 62.763 62.763 82.616 90.00 90.00 120.00 P 63 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015933 0.009199 0.000000 0.00000 SCALE2 0.000000 0.018398 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012104 0.00000