data_6QBL # _entry.id 6QBL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.318 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6QBL WWPDB D_1200013509 BMRB 34346 # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'NMR Structure of Big-defensin 1 from oyster Crassostrea gigas' _pdbx_database_related.db_id 34346 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6QBL _pdbx_database_status.recvd_initial_deposition_date 2018-12-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Loth, K.' 1 0000-0001-7058-8661 'Meudal, H.' 2 0000-0002-9642-3643 'Delmas, A.F.' 3 0000-0002-8243-8887 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Mbio _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2150-7511 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 10 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'The Ancestral N-Terminal Domain of Big Defensins Drives Bacterially Triggered Assembly into Antimicrobial Nanonets.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1128/mBio.01821-19 _citation.pdbx_database_id_PubMed 31641083 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Loth, K.' 1 ? primary 'Vergnes, A.' 2 ? primary 'Barreto, C.' 3 0000-0002-9752-4331 primary 'Voisin, S.N.' 4 ? primary 'Meudal, H.' 5 ? primary 'Da Silva, J.' 6 ? primary 'Bressan, A.' 7 ? primary 'Belmadi, N.' 8 ? primary 'Bachere, E.' 9 ? primary 'Aucagne, V.' 10 ? primary 'Cazevielle, C.' 11 ? primary 'Marchandin, H.' 12 0000-0003-2130-6335 primary 'Rosa, R.D.' 13 0000-0002-4076-3163 primary 'Bulet, P.' 14 ? primary 'Touqui, L.' 15 ? primary 'Delmas, A.F.' 16 ? primary 'Destoumieux-Garzon, D.' 17 0000-0002-8793-9138 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'Big defensin 1' _entity.formula_weight 10712.988 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(PCA)AQALLPIASYAGLTVSAPVFAALVTVYGAYALYRYNIRRRENSYQRIRSDHDSHSCANNRGWCRPTCFSHEYTDW FNNDVCGSYRCCRPGR(AAR) ; _entity_poly.pdbx_seq_one_letter_code_can ;QAQALLPIASYAGLTVSAPVFAALVTVYGAYALYRYNIRRRENSYQRIRSDHDSHSCANNRGWCRPTCFSHEYTDWFNND VCGSYRCCRPGRR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PCA n 1 2 ALA n 1 3 GLN n 1 4 ALA n 1 5 LEU n 1 6 LEU n 1 7 PRO n 1 8 ILE n 1 9 ALA n 1 10 SER n 1 11 TYR n 1 12 ALA n 1 13 GLY n 1 14 LEU n 1 15 THR n 1 16 VAL n 1 17 SER n 1 18 ALA n 1 19 PRO n 1 20 VAL n 1 21 PHE n 1 22 ALA n 1 23 ALA n 1 24 LEU n 1 25 VAL n 1 26 THR n 1 27 VAL n 1 28 TYR n 1 29 GLY n 1 30 ALA n 1 31 TYR n 1 32 ALA n 1 33 LEU n 1 34 TYR n 1 35 ARG n 1 36 TYR n 1 37 ASN n 1 38 ILE n 1 39 ARG n 1 40 ARG n 1 41 ARG n 1 42 GLU n 1 43 ASN n 1 44 SER n 1 45 TYR n 1 46 GLN n 1 47 ARG n 1 48 ILE n 1 49 ARG n 1 50 SER n 1 51 ASP n 1 52 HIS n 1 53 ASP n 1 54 SER n 1 55 HIS n 1 56 SER n 1 57 CYS n 1 58 ALA n 1 59 ASN n 1 60 ASN n 1 61 ARG n 1 62 GLY n 1 63 TRP n 1 64 CYS n 1 65 ARG n 1 66 PRO n 1 67 THR n 1 68 CYS n 1 69 PHE n 1 70 SER n 1 71 HIS n 1 72 GLU n 1 73 TYR n 1 74 THR n 1 75 ASP n 1 76 TRP n 1 77 PHE n 1 78 ASN n 1 79 ASN n 1 80 ASP n 1 81 VAL n 1 82 CYS n 1 83 GLY n 1 84 SER n 1 85 TYR n 1 86 ARG n 1 87 CYS n 1 88 CYS n 1 89 ARG n 1 90 PRO n 1 91 GLY n 1 92 ARG n 1 93 AAR n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 93 _pdbx_entity_src_syn.organism_scientific 'Crassostrea gigas' _pdbx_entity_src_syn.organism_common_name 'Pacific oyster' _pdbx_entity_src_syn.ncbi_taxonomy_id 29159 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code F6M2J2_CRAGI _struct_ref.pdbx_db_accession F6M2J2 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QAQALLPIASYAGLTVSAPVFAALVTVYGAYALYRYNIRRRENSYQRIRSDHDSHSCANNRGWCRPTCFSHEYTDWFNND VCGSYRCCRPGRR ; _struct_ref.pdbx_align_begin 37 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6QBL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 93 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession F6M2J2 _struct_ref_seq.db_align_beg 37 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 129 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 93 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight AAR 'L-peptide linking' n ARGININEAMIDE ? 'C6 H16 N5 O 1' 174.224 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PCA 'L-peptide linking' n 'PYROGLUTAMIC ACID' ? 'C5 H7 N O3' 129.114 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H TOCSY' 1 isotropic 2 1 1 '2D 1H-1H NOESY' 1 isotropic 3 1 1 '2D 1H-15N HSQC' 1 isotropic 4 1 1 '2D 1H-13C HSQC' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 4.6 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label conditions_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.0 mM [1-93]Cg-BigDef1, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label unlabelled _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE III HD' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 700 _pdbx_nmr_spectrometer.details cryoprobe # _pdbx_nmr_refine.entry_id 6QBL _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 6QBL _pdbx_nmr_ensemble.conformers_calculated_total_number 150 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'total energies and restraint violation statistics' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6QBL _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement CNS ? 'Brunger, Adams, Clore, Gros, Nilges and Read' 2 'structure calculation' ARIA ? ;Linge, O'Donoghue and Nilges ; 3 'chemical shift assignment' 'CcpNmr Analysis' ? CCPN 4 'peak picking' 'CcpNmr Analysis' ? CCPN # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6QBL _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6QBL _struct.title 'NMR Structure of Big-defensin 1 from oyster Crassostrea gigas' _struct.pdbx_descriptor 'Big defensin 1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6QBL _struct_keywords.text 'Big-defensin, antimicrobial, marine, oyster, salt insensitive activity, ANTIMICROBIAL PROTEIN' _struct_keywords.pdbx_keywords 'ANTIMICROBIAL PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 17 ? TYR A 28 ? SER A 17 TYR A 28 1 ? 12 HELX_P HELX_P2 AA2 TYR A 28 ? TYR A 36 ? TYR A 28 TYR A 36 1 ? 9 HELX_P HELX_P3 AA3 TRP A 76 ? GLY A 83 ? TRP A 76 GLY A 83 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 57 SG ? ? ? 1_555 A CYS 87 SG ? ? A CYS 57 A CYS 87 1_555 ? ? ? ? ? ? ? 2.195 ? disulf2 disulf ? ? A CYS 64 SG ? ? ? 1_555 A CYS 82 SG ? ? A CYS 64 A CYS 82 1_555 ? ? ? ? ? ? ? 2.147 ? disulf3 disulf ? ? A CYS 68 SG ? ? ? 1_555 A CYS 88 SG ? ? A CYS 68 A CYS 88 1_555 ? ? ? ? ? ? ? 2.228 ? covale1 covale both ? A PCA 1 C ? ? ? 1_555 A ALA 2 N ? ? A PCA 1 A ALA 2 1_555 ? ? ? ? ? ? ? 1.339 ? covale2 covale both ? A ARG 92 C ? ? ? 1_555 A AAR 93 N ? ? A ARG 92 A AAR 93 1_555 ? ? ? ? ? ? ? 1.325 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 15 ? VAL A 16 ? THR A 15 VAL A 16 AA1 2 ARG A 39 ? ARG A 40 ? ARG A 39 ARG A 40 AA2 1 SER A 56 ? CYS A 57 ? SER A 56 CYS A 57 AA2 2 GLY A 62 ? ARG A 65 ? GLY A 62 ARG A 65 AA2 3 ARG A 86 ? GLY A 91 ? ARG A 86 GLY A 91 AA2 4 HIS A 71 ? ASP A 75 ? HIS A 71 ASP A 75 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 16 ? N VAL A 16 O ARG A 39 ? O ARG A 39 AA2 1 2 N CYS A 57 ? N CYS A 57 O GLY A 62 ? O GLY A 62 AA2 2 3 N TRP A 63 ? N TRP A 63 O CYS A 88 ? O CYS A 88 AA2 3 4 O CYS A 87 ? O CYS A 87 N ASP A 75 ? N ASP A 75 # _atom_sites.entry_id 6QBL _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PCA 1 1 1 PCA PCA A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 SER 10 10 10 SER SER A . n A 1 11 TYR 11 11 11 TYR TYR A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 PHE 21 21 21 PHE PHE A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 VAL 27 27 27 VAL VAL A . n A 1 28 TYR 28 28 28 TYR TYR A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 TYR 31 31 31 TYR TYR A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 TYR 34 34 34 TYR TYR A . n A 1 35 ARG 35 35 35 ARG ARG A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 GLU 42 42 42 GLU GLU A . n A 1 43 ASN 43 43 43 ASN ASN A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 TYR 45 45 45 TYR TYR A . n A 1 46 GLN 46 46 46 GLN GLN A . n A 1 47 ARG 47 47 47 ARG ARG A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 ARG 49 49 49 ARG ARG A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 HIS 52 52 52 HIS HIS A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 HIS 55 55 55 HIS HIS A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 CYS 57 57 57 CYS CYS A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 TRP 63 63 63 TRP TRP A . n A 1 64 CYS 64 64 64 CYS CYS A . n A 1 65 ARG 65 65 65 ARG ARG A . n A 1 66 PRO 66 66 66 PRO PRO A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 CYS 68 68 68 CYS CYS A . n A 1 69 PHE 69 69 69 PHE PHE A . n A 1 70 SER 70 70 70 SER SER A . n A 1 71 HIS 71 71 71 HIS HIS A . n A 1 72 GLU 72 72 72 GLU GLU A . n A 1 73 TYR 73 73 73 TYR TYR A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 TRP 76 76 76 TRP TRP A . n A 1 77 PHE 77 77 77 PHE PHE A . n A 1 78 ASN 78 78 78 ASN ASN A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 ASP 80 80 80 ASP ASP A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 CYS 82 82 82 CYS CYS A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 TYR 85 85 85 TYR TYR A . n A 1 86 ARG 86 86 86 ARG ARG A . n A 1 87 CYS 87 87 87 CYS CYS A . n A 1 88 CYS 88 88 88 CYS CYS A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 PRO 90 90 90 PRO PRO A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 ARG 92 92 92 ARG ARG A . n A 1 93 AAR 93 93 93 AAR AAR A . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A PCA 1 A PCA 1 ? GLN 'modified residue' 2 A AAR 93 A AAR 93 ? ARG 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 250 ? 1 MORE 0 ? 1 'SSA (A^2)' 5530 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2019-12-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component '[1-93]Cg-BigDef1' _pdbx_nmr_exptl_sample.concentration 1.0 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling 'natural abundance' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 3 O A PRO 7 ? ? HG A SER 10 ? ? 1.57 2 5 OD1 A ASP 51 ? ? HH A TYR 85 ? ? 1.58 3 6 OD2 A ASP 51 ? ? HG A SER 54 ? ? 1.60 4 10 O A GLU 42 ? ? HD21 A ASN 43 ? ? 1.59 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 3 ? ? -176.11 125.97 2 1 ALA A 4 ? ? 55.00 70.24 3 1 LEU A 5 ? ? -94.65 -157.52 4 1 ALA A 12 ? ? -58.61 105.60 5 1 ARG A 49 ? ? -84.87 49.46 6 1 SER A 50 ? ? 57.91 -161.93 7 1 ASP A 51 ? ? -162.94 -83.45 8 1 HIS A 52 ? ? -140.90 -77.54 9 1 HIS A 71 ? ? 158.12 -9.86 10 1 ARG A 92 ? ? -165.95 38.26 11 2 ALA A 2 ? ? 57.67 -124.88 12 2 GLN A 3 ? ? -37.27 127.35 13 2 ALA A 4 ? ? 86.54 64.06 14 2 ASN A 43 ? ? -159.26 77.94 15 2 ARG A 47 ? ? -89.56 43.67 16 2 ARG A 49 ? ? -93.96 56.80 17 2 SER A 50 ? ? 58.40 -172.22 18 2 ASP A 51 ? ? -158.67 -74.27 19 2 HIS A 52 ? ? -150.05 -70.04 20 2 SER A 70 ? ? -68.73 88.19 21 2 HIS A 71 ? ? 156.05 -8.89 22 2 ARG A 92 ? ? -174.57 41.07 23 3 ALA A 2 ? ? 66.67 169.79 24 3 ALA A 4 ? ? 174.42 71.39 25 3 LEU A 5 ? ? -105.85 -167.18 26 3 ALA A 12 ? ? -57.84 108.40 27 3 ASN A 43 ? ? -143.65 33.10 28 3 TYR A 45 ? ? -113.35 -169.86 29 3 SER A 50 ? ? 59.80 120.06 30 3 HIS A 71 ? ? 152.78 -6.56 31 3 ARG A 92 ? ? -154.07 -40.30 32 4 ALA A 2 ? ? 63.32 -164.76 33 4 GLN A 3 ? ? 67.40 123.61 34 4 ALA A 4 ? ? 57.12 77.90 35 4 LEU A 5 ? ? -106.51 -162.15 36 4 ASN A 43 ? ? 79.75 137.68 37 4 ARG A 47 ? ? -150.94 48.81 38 4 ARG A 49 ? ? -83.51 49.83 39 4 SER A 50 ? ? 58.99 -159.50 40 4 ASP A 51 ? ? -174.13 -154.31 41 4 HIS A 71 ? ? 158.78 -7.23 42 4 ARG A 92 ? ? -167.60 40.73 43 5 ALA A 4 ? ? 55.01 71.01 44 5 PRO A 7 ? ? -48.03 150.49 45 5 SER A 50 ? ? 172.03 170.13 46 5 ASP A 51 ? ? 171.40 -74.09 47 5 HIS A 52 ? ? -167.53 -72.10 48 5 HIS A 71 ? ? 157.19 -8.09 49 5 ARG A 92 ? ? -158.90 30.58 50 6 ALA A 2 ? ? 69.97 139.50 51 6 GLN A 3 ? ? 73.40 135.02 52 6 ALA A 4 ? ? 61.37 65.87 53 6 LEU A 5 ? ? -100.52 -157.46 54 6 ASN A 43 ? ? -140.36 37.36 55 6 ARG A 47 ? ? -105.13 67.12 56 6 ARG A 49 ? ? -90.06 33.74 57 6 SER A 50 ? ? 54.31 -170.84 58 6 ASP A 51 ? ? -169.04 -88.97 59 6 HIS A 52 ? ? -115.42 -78.05 60 6 HIS A 71 ? ? 150.39 0.11 61 6 ARG A 92 ? ? -173.41 49.75 62 7 ALA A 2 ? ? -46.25 161.01 63 7 GLN A 3 ? ? 76.57 128.72 64 7 ALA A 4 ? ? 56.51 72.19 65 7 LEU A 5 ? ? -106.46 -163.97 66 7 ASN A 43 ? ? -164.26 75.35 67 7 ARG A 47 ? ? -164.59 59.09 68 7 ASP A 51 ? ? -77.71 -155.69 69 7 HIS A 71 ? ? 160.17 -15.09 70 7 ARG A 92 ? ? -178.72 39.99 71 8 ALA A 2 ? ? 63.44 -175.12 72 8 GLN A 3 ? ? 65.93 139.26 73 8 ASN A 43 ? ? -158.17 47.51 74 8 SER A 44 ? ? 72.28 -48.56 75 8 ARG A 47 ? ? -175.51 66.64 76 8 SER A 50 ? ? 62.10 -170.33 77 8 ASP A 51 ? ? -167.72 -91.77 78 8 HIS A 52 ? ? -137.05 -79.39 79 8 HIS A 71 ? ? 156.83 -8.45 80 8 ARG A 92 ? ? -158.45 -37.93 81 9 GLN A 3 ? ? 75.60 124.60 82 9 ALA A 4 ? ? 64.74 75.68 83 9 LEU A 5 ? ? -109.99 -161.50 84 9 ASN A 43 ? ? -173.72 116.50 85 9 ARG A 47 ? ? -165.26 72.07 86 9 SER A 50 ? ? -113.00 -160.56 87 9 ASP A 51 ? ? -61.51 -173.75 88 9 HIS A 71 ? ? 156.85 -13.20 89 9 ARG A 92 ? ? -168.96 46.70 90 10 ALA A 2 ? ? -129.86 -69.82 91 10 GLN A 3 ? ? 61.24 129.25 92 10 ALA A 4 ? ? 54.88 71.93 93 10 LEU A 5 ? ? -107.65 -164.95 94 10 ARG A 47 ? ? -157.05 62.76 95 10 ARG A 49 ? ? -93.38 30.22 96 10 SER A 50 ? ? 58.44 123.02 97 10 HIS A 71 ? ? 158.46 -6.10 98 10 ARG A 92 ? ? -172.42 37.02 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #