data_6QKQ # _entry.id 6QKQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6QKQ pdb_00006qkq 10.2210/pdb6qkq/pdb WWPDB D_1292100336 ? ? BMRB 34359 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB '6QKP contains the wild-type protein of this mutant.' 6QKP unspecified BMRB 'NMR solution structure of LSR2-T112D binding domain.' 34359 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6QKQ _pdbx_database_status.recvd_initial_deposition_date 2019-01-30 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Barthe, P.' 1 0000-0003-4282-6604 'Cohen-Gonsaud, M.' 2 0000-0002-0150-9912 'Mukamolova, G.V.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Mol.Microbiol. _citation.journal_id_ASTM MOMIEE _citation.journal_id_CSD 2007 _citation.journal_id_ISSN 1365-2958 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 112 _citation.language ? _citation.page_first 1847 _citation.page_last 1862 _citation.title ;Protein kinase B controls Mycobacterium tuberculosis growth via phosphorylation of the transcriptional regulator Lsr2 at threonine 112. ; _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1111/mmi.14398 _citation.pdbx_database_id_PubMed 31562654 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Alqaseer, K.' 1 ? primary 'Turapov, O.' 2 ? primary 'Barthe, P.' 3 ? primary 'Jagatia, H.' 4 ? primary 'De Visch, A.' 5 ? primary 'Roumestand, C.' 6 ? primary 'Wegrzyn, M.' 7 ? primary 'Bartek, I.L.' 8 ? primary 'Voskuil, M.I.' 9 ? primary ;O'Hare, H.M. ; 10 ? primary 'Ajuh, P.' 11 ? primary 'Bottrill, A.R.' 12 ? primary 'Witney, A.A.' 13 ? primary 'Cohen-Gonsaud, M.' 14 ? primary 'Waddell, S.J.' 15 ? primary 'Mukamolova, G.V.' 16 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Nucleoid-associated protein Lsr2' _entity.formula_weight 5508.020 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GPHMSGSGRGRGAIDREQSAAIREWARRNGHNVSTRGRIPADVIDAYHAAD _entity_poly.pdbx_seq_one_letter_code_can GPHMSGSGRGRGAIDREQSAAIREWARRNGHNVSTRGRIPADVIDAYHAAD _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 HIS n 1 4 MET n 1 5 SER n 1 6 GLY n 1 7 SER n 1 8 GLY n 1 9 ARG n 1 10 GLY n 1 11 ARG n 1 12 GLY n 1 13 ALA n 1 14 ILE n 1 15 ASP n 1 16 ARG n 1 17 GLU n 1 18 GLN n 1 19 SER n 1 20 ALA n 1 21 ALA n 1 22 ILE n 1 23 ARG n 1 24 GLU n 1 25 TRP n 1 26 ALA n 1 27 ARG n 1 28 ARG n 1 29 ASN n 1 30 GLY n 1 31 HIS n 1 32 ASN n 1 33 VAL n 1 34 SER n 1 35 THR n 1 36 ARG n 1 37 GLY n 1 38 ARG n 1 39 ILE n 1 40 PRO n 1 41 ALA n 1 42 ASP n 1 43 VAL n 1 44 ILE n 1 45 ASP n 1 46 ALA n 1 47 TYR n 1 48 HIS n 1 49 ALA n 1 50 ALA n 1 51 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 51 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'lsr2, Rv3597c, MTCY07H7B.25' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83332 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LSR2_MYCTU _struct_ref.pdbx_db_accession P9WIP7 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code AIDREQSAAIREWARRNGHNVSTRGRIPADVIDAYHAA _struct_ref.pdbx_align_begin 74 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6QKQ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 13 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 50 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P9WIP7 _struct_ref_seq.db_align_beg 74 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 111 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 74 _struct_ref_seq.pdbx_auth_seq_align_end 111 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6QKQ GLY A 1 ? UNP P9WIP7 ? ? 'expression tag' 62 1 1 6QKQ PRO A 2 ? UNP P9WIP7 ? ? 'expression tag' 63 2 1 6QKQ HIS A 3 ? UNP P9WIP7 ? ? 'expression tag' 64 3 1 6QKQ MET A 4 ? UNP P9WIP7 ? ? 'expression tag' 65 4 1 6QKQ SER A 5 ? UNP P9WIP7 ? ? 'expression tag' 66 5 1 6QKQ GLY A 6 ? UNP P9WIP7 ? ? 'expression tag' 67 6 1 6QKQ SER A 7 ? UNP P9WIP7 ? ? 'expression tag' 68 7 1 6QKQ GLY A 8 ? UNP P9WIP7 ? ? 'expression tag' 69 8 1 6QKQ ARG A 9 ? UNP P9WIP7 ? ? 'expression tag' 70 9 1 6QKQ GLY A 10 ? UNP P9WIP7 ? ? 'expression tag' 71 10 1 6QKQ ARG A 11 ? UNP P9WIP7 ? ? 'expression tag' 72 11 1 6QKQ GLY A 12 ? UNP P9WIP7 ? ? 'expression tag' 73 12 1 6QKQ ASP A 51 ? UNP P9WIP7 ? ? 'expression tag' 112 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '3D 1H-15N NOESY' 2 isotropic 2 1 1 '3D 1H-15N TOCSY' 2 isotropic 3 1 2 '2D 1H-1H NOESY' 2 isotropic 4 1 2 '2D 1H-1H TOCSY' 2 isotropic 5 1 2 '2D DQF-COSY' 2 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 293 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.8 _pdbx_nmr_exptl_sample_conditions.ionic_strength 150 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label conditions_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '0.5 mM [U-15N] LSR2-T112D protein, 90% H2O/10% D2O' '90% H2O/10% D2O' 15N_sample solution ? 2 '0.5 mM [U-15N] LSR2-T112D protein, 100% D2O' '100% D2O' D2O_sample solution ? # _pdbx_nmr_spectrometer.spectrometer_id 2 _pdbx_nmr_spectrometer.model 'AVANCE III' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 700 _pdbx_nmr_spectrometer.details ? # _pdbx_nmr_refine.entry_id 6QKQ _pdbx_nmr_refine.method 'MDSA and refinement in explicit solvent' _pdbx_nmr_refine.details 'RECOORD Procedure' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 6QKQ _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6QKQ _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement CNS ? 'Brunger, Adams, Clore, Gros, Nilges and Read' 2 'structure calculation' CYANA ? 'Guntert, Mumenthaler and Wuthrich' 3 'chemical shift assignment' CINDY ? Padilla 4 'peak picking' Gifa ? Delsuc # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6QKQ _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6QKQ _struct.title 'NMR solution structure of LSR2-T112D binding domain.' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6QKQ _struct_keywords.text 'Tuberculosis, DNA oraganisation, Transcriptional regulator, PknB substrate, DNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLN A 18 ? GLY A 30 ? GLN A 79 GLY A 91 1 ? 13 HELX_P HELX_P2 AA2 PRO A 40 ? ALA A 50 ? PRO A 101 ALA A 111 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 6QKQ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 62 ? ? ? A . n A 1 2 PRO 2 63 ? ? ? A . n A 1 3 HIS 3 64 ? ? ? A . n A 1 4 MET 4 65 65 MET MET A . n A 1 5 SER 5 66 66 SER SER A . n A 1 6 GLY 6 67 67 GLY GLY A . n A 1 7 SER 7 68 68 SER SER A . n A 1 8 GLY 8 69 69 GLY GLY A . n A 1 9 ARG 9 70 70 ARG ARG A . n A 1 10 GLY 10 71 71 GLY GLY A . n A 1 11 ARG 11 72 72 ARG ARG A . n A 1 12 GLY 12 73 73 GLY GLY A . n A 1 13 ALA 13 74 74 ALA ALA A . n A 1 14 ILE 14 75 75 ILE ILE A . n A 1 15 ASP 15 76 76 ASP ASP A . n A 1 16 ARG 16 77 77 ARG ARG A . n A 1 17 GLU 17 78 78 GLU GLU A . n A 1 18 GLN 18 79 79 GLN GLN A . n A 1 19 SER 19 80 80 SER SER A . n A 1 20 ALA 20 81 81 ALA ALA A . n A 1 21 ALA 21 82 82 ALA ALA A . n A 1 22 ILE 22 83 83 ILE ILE A . n A 1 23 ARG 23 84 84 ARG ARG A . n A 1 24 GLU 24 85 85 GLU GLU A . n A 1 25 TRP 25 86 86 TRP TRP A . n A 1 26 ALA 26 87 87 ALA ALA A . n A 1 27 ARG 27 88 88 ARG ARG A . n A 1 28 ARG 28 89 89 ARG ARG A . n A 1 29 ASN 29 90 90 ASN ASN A . n A 1 30 GLY 30 91 91 GLY GLY A . n A 1 31 HIS 31 92 92 HIS HIS A . n A 1 32 ASN 32 93 93 ASN ASN A . n A 1 33 VAL 33 94 94 VAL VAL A . n A 1 34 SER 34 95 95 SER SER A . n A 1 35 THR 35 96 96 THR THR A . n A 1 36 ARG 36 97 97 ARG ARG A . n A 1 37 GLY 37 98 98 GLY GLY A . n A 1 38 ARG 38 99 99 ARG ARG A . n A 1 39 ILE 39 100 100 ILE ILE A . n A 1 40 PRO 40 101 101 PRO PRO A . n A 1 41 ALA 41 102 102 ALA ALA A . n A 1 42 ASP 42 103 103 ASP ASP A . n A 1 43 VAL 43 104 104 VAL VAL A . n A 1 44 ILE 44 105 105 ILE ILE A . n A 1 45 ASP 45 106 106 ASP ASP A . n A 1 46 ALA 46 107 107 ALA ALA A . n A 1 47 TYR 47 108 108 TYR TYR A . n A 1 48 HIS 48 109 109 HIS HIS A . n A 1 49 ALA 49 110 110 ALA ALA A . n A 1 50 ALA 50 111 111 ALA ALA A . n A 1 51 ASP 51 112 112 ASP ASP A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 3960 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-07-17 2 'Structure model' 1 1 2019-10-09 3 'Structure model' 1 2 2019-12-18 4 'Structure model' 1 3 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Database references' 5 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 3 'Structure model' '_citation.journal_volume' 11 3 'Structure model' '_citation.page_first' 12 3 'Structure model' '_citation.page_last' 13 4 'Structure model' '_database_2.pdbx_DOI' 14 4 'Structure model' '_database_2.pdbx_database_accession' 15 4 'Structure model' '_pdbx_database_status.status_code_nmr_data' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'LSR2-T112D protein' 0.5 ? mM '[U-15N]' 2 'LSR2-T112D protein' 0.5 ? mM '[U-15N]' # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 6 _pdbx_validate_close_contact.auth_atom_id_1 OE1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 78 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 HG _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 SER _pdbx_validate_close_contact.auth_seq_id_2 80 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.58 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 66 ? ? 72.83 -46.92 2 1 ARG A 70 ? ? 63.56 70.82 3 1 ARG A 72 ? ? 66.35 -178.59 4 1 SER A 95 ? ? 79.68 -39.22 5 1 ARG A 99 ? ? 63.23 -173.40 6 2 SER A 66 ? ? 59.63 -70.79 7 2 SER A 80 ? ? -137.90 -43.90 8 2 ASN A 93 ? ? 70.24 177.35 9 2 VAL A 94 ? ? -111.54 -87.99 10 2 SER A 95 ? ? -175.85 107.48 11 2 THR A 96 ? ? -64.74 82.02 12 2 ARG A 97 ? ? -170.45 -36.01 13 3 SER A 68 ? ? 70.54 -62.97 14 3 ASP A 76 ? ? -165.61 101.49 15 3 ARG A 77 ? ? -169.99 -65.99 16 3 SER A 80 ? ? -160.13 -46.63 17 3 ASN A 93 ? ? 61.53 88.92 18 3 SER A 95 ? ? -149.38 32.07 19 3 ARG A 97 ? ? 56.52 74.37 20 4 GLU A 78 ? ? 73.68 -38.72 21 6 GLU A 78 ? ? 61.68 99.43 22 6 GLN A 79 ? ? -114.10 74.69 23 6 SER A 95 ? ? 61.82 72.38 24 6 THR A 96 ? ? -57.35 97.96 25 6 ARG A 97 ? ? -148.05 -79.77 26 7 ARG A 70 ? ? 56.67 93.61 27 7 ASP A 76 ? ? -112.41 -166.84 28 8 ARG A 77 ? ? 179.79 -57.92 29 8 GLN A 79 ? ? -112.15 77.82 30 8 SER A 95 ? ? -60.86 -72.31 31 9 ARG A 72 ? ? 63.66 -86.56 32 9 ARG A 99 ? ? 173.48 127.15 33 10 SER A 66 ? ? 70.54 96.90 34 11 ARG A 77 ? ? 74.08 -54.15 35 11 GLN A 79 ? ? -108.18 77.16 36 11 ARG A 97 ? ? 63.13 81.14 37 11 ARG A 99 ? ? -103.45 -84.65 38 12 SER A 68 ? ? -104.23 -67.27 39 12 SER A 80 ? ? -141.55 -56.41 40 13 SER A 66 ? ? -60.44 99.69 41 13 ARG A 77 ? ? -138.10 -60.84 42 13 SER A 95 ? ? 66.50 95.96 43 13 ARG A 99 ? ? -112.59 -159.99 44 14 GLN A 79 ? ? -68.74 85.22 45 14 VAL A 94 ? ? -76.21 -70.60 46 14 SER A 95 ? ? 53.93 -87.77 47 16 ARG A 72 ? ? 70.61 -46.42 48 16 ARG A 77 ? ? 63.98 -83.05 49 16 GLU A 78 ? ? -169.72 -67.34 50 16 GLN A 79 ? ? -109.63 65.29 51 17 ALA A 74 ? ? -108.06 -162.85 52 17 ARG A 77 ? ? -136.57 -56.39 53 17 SER A 80 ? ? -124.16 -51.46 54 18 SER A 68 ? ? -67.67 99.02 55 18 ARG A 77 ? ? -137.90 -55.72 56 18 SER A 80 ? ? -154.83 -64.26 57 18 SER A 95 ? ? -140.83 54.82 58 18 THR A 96 ? ? -86.79 -88.26 59 18 ARG A 97 ? ? -148.91 -60.10 60 19 SER A 66 ? ? -144.84 33.55 61 20 SER A 66 ? ? 70.74 100.72 62 20 ARG A 72 ? ? 71.34 103.34 63 20 ALA A 74 ? ? 69.01 66.52 64 20 ARG A 77 ? ? -170.62 -49.00 65 20 GLU A 78 ? ? -102.50 78.38 66 20 SER A 80 ? ? -137.74 -39.74 67 20 SER A 95 ? ? -97.87 -82.59 68 20 THR A 96 ? ? -136.53 -51.54 69 20 ARG A 99 ? ? 61.19 -111.76 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 5 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 84 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.110 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 62 ? A GLY 1 2 1 Y 1 A PRO 63 ? A PRO 2 3 1 Y 1 A HIS 64 ? A HIS 3 4 2 Y 1 A GLY 62 ? A GLY 1 5 2 Y 1 A PRO 63 ? A PRO 2 6 2 Y 1 A HIS 64 ? A HIS 3 7 3 Y 1 A GLY 62 ? A GLY 1 8 3 Y 1 A PRO 63 ? A PRO 2 9 3 Y 1 A HIS 64 ? A HIS 3 10 4 Y 1 A GLY 62 ? A GLY 1 11 4 Y 1 A PRO 63 ? A PRO 2 12 4 Y 1 A HIS 64 ? A HIS 3 13 5 Y 1 A GLY 62 ? A GLY 1 14 5 Y 1 A PRO 63 ? A PRO 2 15 5 Y 1 A HIS 64 ? A HIS 3 16 6 Y 1 A GLY 62 ? A GLY 1 17 6 Y 1 A PRO 63 ? A PRO 2 18 6 Y 1 A HIS 64 ? A HIS 3 19 7 Y 1 A GLY 62 ? A GLY 1 20 7 Y 1 A PRO 63 ? A PRO 2 21 7 Y 1 A HIS 64 ? A HIS 3 22 8 Y 1 A GLY 62 ? A GLY 1 23 8 Y 1 A PRO 63 ? A PRO 2 24 8 Y 1 A HIS 64 ? A HIS 3 25 9 Y 1 A GLY 62 ? A GLY 1 26 9 Y 1 A PRO 63 ? A PRO 2 27 9 Y 1 A HIS 64 ? A HIS 3 28 10 Y 1 A GLY 62 ? A GLY 1 29 10 Y 1 A PRO 63 ? A PRO 2 30 10 Y 1 A HIS 64 ? A HIS 3 31 11 Y 1 A GLY 62 ? A GLY 1 32 11 Y 1 A PRO 63 ? A PRO 2 33 11 Y 1 A HIS 64 ? A HIS 3 34 12 Y 1 A GLY 62 ? A GLY 1 35 12 Y 1 A PRO 63 ? A PRO 2 36 12 Y 1 A HIS 64 ? A HIS 3 37 13 Y 1 A GLY 62 ? A GLY 1 38 13 Y 1 A PRO 63 ? A PRO 2 39 13 Y 1 A HIS 64 ? A HIS 3 40 14 Y 1 A GLY 62 ? A GLY 1 41 14 Y 1 A PRO 63 ? A PRO 2 42 14 Y 1 A HIS 64 ? A HIS 3 43 15 Y 1 A GLY 62 ? A GLY 1 44 15 Y 1 A PRO 63 ? A PRO 2 45 15 Y 1 A HIS 64 ? A HIS 3 46 16 Y 1 A GLY 62 ? A GLY 1 47 16 Y 1 A PRO 63 ? A PRO 2 48 16 Y 1 A HIS 64 ? A HIS 3 49 17 Y 1 A GLY 62 ? A GLY 1 50 17 Y 1 A PRO 63 ? A PRO 2 51 17 Y 1 A HIS 64 ? A HIS 3 52 18 Y 1 A GLY 62 ? A GLY 1 53 18 Y 1 A PRO 63 ? A PRO 2 54 18 Y 1 A HIS 64 ? A HIS 3 55 19 Y 1 A GLY 62 ? A GLY 1 56 19 Y 1 A PRO 63 ? A PRO 2 57 19 Y 1 A HIS 64 ? A HIS 3 58 20 Y 1 A GLY 62 ? A GLY 1 59 20 Y 1 A PRO 63 ? A PRO 2 60 20 Y 1 A HIS 64 ? A HIS 3 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #