HEADER FLUORESCENT PROTEIN 27-FEB-19 6QUH TITLE GHK TAGGED GFP VARIANT CRYSTAL FORM II AT 1.34A WAVELENGTH COMPND MOL_ID: 1; COMPND 2 MOLECULE: GREEN FLUORESCENT PROTEIN; COMPND 3 CHAIN: B, E; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEQUOREA VICTORIA; SOURCE 3 ORGANISM_TAXID: 6100; SOURCE 4 GENE: GFP; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GFP, FLUORESCENT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.HUYTON,D.GORLICH REVDAT 4 07-DEC-22 6QUH 1 COMPND SOURCE REMARK DBREF REVDAT 4 2 1 SEQADV SEQRES HELIX SHEET REVDAT 4 3 1 LINK ATOM REVDAT 3 16-DEC-20 6QUH 1 JRNL REVDAT 2 09-DEC-20 6QUH 1 CAVEAT COMPND SOURCE JRNL REVDAT 2 2 1 REMARK DBREF SEQADV HET REVDAT 2 3 1 HETNAM HETSYN FORMUL SHEET REVDAT 2 4 1 LINK SITE ATOM REVDAT 1 27-MAY-20 6QUH 0 JRNL AUTH A.MEHR,F.HENNEBERG,A.CHARI,D.GORLICH,T.HUYTON JRNL TITL THE COPPER(II)-BINDING TRIPEPTIDE GHK, A VALUABLE JRNL TITL 2 CRYSTALLIZATION AND PHASING TAG FOR MACROMOLECULAR JRNL TITL 3 CRYSTALLOGRAPHY. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 76 1222 2020 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 33263328 JRNL DOI 10.1107/S2059798320013741 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0253 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 71.16 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 83308 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.144 REMARK 3 R VALUE (WORKING SET) : 0.142 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 4320 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6059 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.89 REMARK 3 BIN R VALUE (WORKING SET) : 0.3300 REMARK 3 BIN FREE R VALUE SET COUNT : 302 REMARK 3 BIN FREE R VALUE : 0.4080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3712 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 54 REMARK 3 SOLVENT ATOMS : 588 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.91000 REMARK 3 B22 (A**2) : -1.70000 REMARK 3 B33 (A**2) : 0.80000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.069 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.066 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.039 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.440 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.978 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.964 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3945 ; 0.007 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3552 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5325 ; 1.407 ; 1.683 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8151 ; 1.331 ; 1.589 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 472 ; 7.323 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 272 ;25.513 ;19.853 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 620 ;12.538 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 54 ;14.086 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 497 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4479 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 953 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 7487 ; 1.168 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 B E 7192 0.110 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6QUH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-FEB-19. REMARK 100 THE DEPOSITION ID IS D_1292100589. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-MAY-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, DESY REMARK 200 BEAMLINE : P11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.34 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 87711 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 99.310 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: CRANK2 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SOSIUM ACETATE PH 5.4, 30%MPD, REMARK 280 0.1M CACL2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.65350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.00550 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.65350 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 51.00550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 687 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP E 101 -159.30 -150.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 304 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY B 0 N REMARK 620 2 HIS B 1 N 82.2 REMARK 620 3 HIS B 1 ND1 169.8 96.1 REMARK 620 4 ASP B 74 OD2 105.7 56.6 65.5 REMARK 620 5 HOH B 632 O 92.5 99.5 97.7 146.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 305 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 25 NE2 REMARK 620 2 GLU B 130 OE1 154.1 REMARK 620 3 GLU B 130 OE2 139.1 61.6 REMARK 620 4 HOH B 525 O 77.4 76.8 128.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU E 304 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 137 O REMARK 620 2 GLU B 170 OE2 99.5 REMARK 620 3 GLY E 0 N 135.1 38.3 REMARK 620 4 HIS E 1 N 130.9 33.6 4.8 REMARK 620 5 HIS E 1 ND1 127.1 31.7 7.9 4.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 306 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 140 OE1 REMARK 620 2 GLU B 140 OE2 56.5 REMARK 620 3 HOH B 406 O 63.0 117.3 REMARK 620 4 HOH B 455 O 84.0 95.9 93.0 REMARK 620 5 HOH B 524 O 127.9 74.0 168.8 86.1 REMARK 620 6 HOH B 630 O 99.7 86.5 88.5 176.3 91.8 REMARK 620 7 HOH B 689 O 143.8 158.0 84.7 81.6 84.1 95.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU E 305 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS E 25 NE2 REMARK 620 2 HIS E 75 NE2 66.2 REMARK 620 3 GLU E 130 OE1 157.4 97.0 REMARK 620 4 HOH E 403 O 89.1 57.7 68.6 REMARK 620 5 HOH E 595 O 95.5 139.0 87.7 87.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA E 306 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU E 140 OE1 REMARK 620 2 GLU E 140 OE2 57.0 REMARK 620 3 HOH E 417 O 79.9 87.2 REMARK 620 4 HOH E 450 O 125.5 71.1 82.3 REMARK 620 5 HOH E 463 O 71.2 126.6 96.5 162.3 REMARK 620 6 HOH E 610 O 104.9 85.2 166.5 84.8 97.0 REMARK 620 7 HOH E 681 O 148.2 148.9 83.5 78.2 84.0 97.4 REMARK 620 N 1 2 3 4 5 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6QUJ RELATED DB: PDB REMARK 900 GHK-GFP CRYSTAL FORM I @1.34A WAVELENGTH REMARK 900 RELATED ID: 6QUI RELATED DB: PDB REMARK 900 GHK-GFP CRYSTAL FORM I @17KEV REMARK 900 RELATED ID: 6QUG RELATED DB: PDB REMARK 900 GHK-MBP-NUP98 DBREF 6QUH B 1 228 UNP P42212 GFP_AEQVI 2 230 DBREF 6QUH E 1 228 UNP P42212 GFP_AEQVI 2 230 SEQADV 6QUH GLY B 0 UNP P42212 EXPRESSION TAG SEQADV 6QUH HIS B 1 UNP P42212 SER 2 CONFLICT SEQADV 6QUH ARG B 3 UNP P42212 INSERTION SEQADV 6QUH GLN B 6 UNP P42212 GLU 6 CONFLICT SEQADV 6QUH ARG B 26 UNP P42212 LYS 26 CONFLICT SEQADV 6QUH ARG B 30 UNP P42212 SER 30 CONFLICT SEQADV 6QUH ASN B 39 UNP P42212 TYR 39 CONFLICT SEQADV 6QUH ARG B 41 UNP P42212 LYS 41 CONFLICT SEQADV 6QUH ARG B 45 UNP P42212 LYS 45 CONFLICT SEQADV 6QUH ARG B 52 UNP P42212 LYS 52 CONFLICT SEQADV 6QUH B UNP P42212 PHE 64 DELETION SEQADV 6QUH B UNP P42212 SER 65 DELETION SEQADV 6QUH LEU B 64 UNP P42212 TYR 66 CONFLICT SEQADV 6QUH CRO B 65 UNP P42212 GLY 67 CONFLICT SEQADV 6QUH ARG B 77 UNP P42212 LYS 79 CONFLICT SEQADV 6QUH ARG B 78 UNP P42212 GLN 80 CONFLICT SEQADV 6QUH SER B 97 UNP P42212 PHE 99 CONFLICT SEQADV 6QUH ARG B 99 UNP P42212 LYS 101 CONFLICT SEQADV 6QUH THR B 103 UNP P42212 ASN 105 CONFLICT SEQADV 6QUH ARG B 105 UNP P42212 LYS 107 CONFLICT SEQADV 6QUH VAL B 109 UNP P42212 GLU 111 CONFLICT SEQADV 6QUH ARG B 111 UNP P42212 LYS 113 CONFLICT SEQADV 6QUH ASN B 115 UNP P42212 ASP 117 CONFLICT SEQADV 6QUH ARG B 124 UNP P42212 LYS 126 CONFLICT SEQADV 6QUH THR B 126 UNP P42212 ILE 128 CONFLICT SEQADV 6QUH ASN B 127 UNP P42212 ASP 129 CONFLICT SEQADV 6QUH ARG B 129 UNP P42212 LYS 131 CONFLICT SEQADV 6QUH ARG B 138 UNP P42212 LYS 140 CONFLICT SEQADV 6QUH THR B 151 UNP P42212 MET 153 CONFLICT SEQADV 6QUH ARG B 154 UNP P42212 LYS 156 CONFLICT SEQADV 6QUH ARG B 156 UNP P42212 LYS 158 CONFLICT SEQADV 6QUH ARG B 160 UNP P42212 LYS 162 CONFLICT SEQADV 6QUH ALA B 161 UNP P42212 VAL 163 CONFLICT SEQADV 6QUH THR B 164 UNP P42212 LYS 166 CONFLICT SEQADV 6QUH VAL B 169 UNP P42212 ILE 171 CONFLICT SEQADV 6QUH ASN B 178 UNP P42212 ASP 180 CONFLICT SEQADV 6QUH ASN B 188 UNP P42212 ASP 190 CONFLICT SEQADV 6QUH ASP B 196 UNP P42212 ASN 198 CONFLICT SEQADV 6QUH THR B 203 UNP P42212 SER 205 CONFLICT SEQADV 6QUH ARG B 207 UNP P42212 LYS 209 CONFLICT SEQADV 6QUH ARG B 212 UNP P42212 LYS 214 CONFLICT SEQADV 6QUH GLY E 0 UNP P42212 EXPRESSION TAG SEQADV 6QUH HIS E 1 UNP P42212 SER 2 CONFLICT SEQADV 6QUH ARG E 3 UNP P42212 INSERTION SEQADV 6QUH GLN E 6 UNP P42212 GLU 6 CONFLICT SEQADV 6QUH ARG E 26 UNP P42212 LYS 26 CONFLICT SEQADV 6QUH ARG E 30 UNP P42212 SER 30 CONFLICT SEQADV 6QUH ASN E 39 UNP P42212 TYR 39 CONFLICT SEQADV 6QUH ARG E 41 UNP P42212 LYS 41 CONFLICT SEQADV 6QUH ARG E 45 UNP P42212 LYS 45 CONFLICT SEQADV 6QUH ARG E 52 UNP P42212 LYS 52 CONFLICT SEQADV 6QUH E UNP P42212 PHE 64 DELETION SEQADV 6QUH E UNP P42212 SER 65 DELETION SEQADV 6QUH LEU E 64 UNP P42212 TYR 66 CONFLICT SEQADV 6QUH CRO E 65 UNP P42212 GLY 67 CONFLICT SEQADV 6QUH ARG E 77 UNP P42212 LYS 79 CONFLICT SEQADV 6QUH ARG E 78 UNP P42212 GLN 80 CONFLICT SEQADV 6QUH SER E 97 UNP P42212 PHE 99 CONFLICT SEQADV 6QUH ARG E 99 UNP P42212 LYS 101 CONFLICT SEQADV 6QUH THR E 103 UNP P42212 ASN 105 CONFLICT SEQADV 6QUH ARG E 105 UNP P42212 LYS 107 CONFLICT SEQADV 6QUH VAL E 109 UNP P42212 GLU 111 CONFLICT SEQADV 6QUH ARG E 111 UNP P42212 LYS 113 CONFLICT SEQADV 6QUH ASN E 115 UNP P42212 ASP 117 CONFLICT SEQADV 6QUH ARG E 124 UNP P42212 LYS 126 CONFLICT SEQADV 6QUH THR E 126 UNP P42212 ILE 128 CONFLICT SEQADV 6QUH ASN E 127 UNP P42212 ASP 129 CONFLICT SEQADV 6QUH ARG E 129 UNP P42212 LYS 131 CONFLICT SEQADV 6QUH ARG E 138 UNP P42212 LYS 140 CONFLICT SEQADV 6QUH THR E 151 UNP P42212 MET 153 CONFLICT SEQADV 6QUH ARG E 154 UNP P42212 LYS 156 CONFLICT SEQADV 6QUH ARG E 156 UNP P42212 LYS 158 CONFLICT SEQADV 6QUH ARG E 160 UNP P42212 LYS 162 CONFLICT SEQADV 6QUH ALA E 161 UNP P42212 VAL 163 CONFLICT SEQADV 6QUH THR E 164 UNP P42212 LYS 166 CONFLICT SEQADV 6QUH VAL E 169 UNP P42212 ILE 171 CONFLICT SEQADV 6QUH ASN E 178 UNP P42212 ASP 180 CONFLICT SEQADV 6QUH ASN E 188 UNP P42212 ASP 190 CONFLICT SEQADV 6QUH ASP E 196 UNP P42212 ASN 198 CONFLICT SEQADV 6QUH THR E 203 UNP P42212 SER 205 CONFLICT SEQADV 6QUH ARG E 207 UNP P42212 LYS 209 CONFLICT SEQADV 6QUH ARG E 212 UNP P42212 LYS 214 CONFLICT SEQRES 1 B 229 GLY HIS LYS ARG GLY GLU GLN LEU PHE THR GLY VAL VAL SEQRES 2 B 229 PRO ILE LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS SEQRES 3 B 229 ARG PHE SER VAL ARG GLY GLU GLY GLU GLY ASP ALA THR SEQRES 4 B 229 ASN GLY ARG LEU THR LEU ARG PHE ILE CYS THR THR GLY SEQRES 5 B 229 ARG LEU PRO VAL PRO TRP PRO THR LEU VAL THR THR LEU SEQRES 6 B 229 CRO VAL GLN CYS PHE SER ARG TYR PRO ASP HIS MET ARG SEQRES 7 B 229 ARG HIS ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR SEQRES 8 B 229 VAL GLN GLU ARG THR ILE SER PHE ARG ASP ASP GLY THR SEQRES 9 B 229 TYR ARG THR ARG ALA VAL VAL ARG PHE GLU GLY ASN THR SEQRES 10 B 229 LEU VAL ASN ARG ILE GLU LEU ARG GLY THR ASN PHE ARG SEQRES 11 B 229 GLU ASP GLY ASN ILE LEU GLY HIS ARG LEU GLU TYR ASN SEQRES 12 B 229 TYR ASN SER HIS ASN VAL TYR ILE THR ALA ASP ARG GLN SEQRES 13 B 229 ARG ASN GLY ILE ARG ALA ASN PHE THR ILE ARG HIS ASN SEQRES 14 B 229 VAL GLU ASP GLY SER VAL GLN LEU ALA ASN HIS TYR GLN SEQRES 15 B 229 GLN ASN THR PRO ILE GLY ASN GLY PRO VAL LEU LEU PRO SEQRES 16 B 229 ASP ASP HIS TYR LEU SER THR GLN THR ALA LEU SER ARG SEQRES 17 B 229 ASP PRO ASN GLU ARG ARG ASP HIS MET VAL LEU LEU GLU SEQRES 18 B 229 PHE VAL THR ALA ALA GLY ILE THR SEQRES 1 E 229 GLY HIS LYS ARG GLY GLU GLN LEU PHE THR GLY VAL VAL SEQRES 2 E 229 PRO ILE LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS SEQRES 3 E 229 ARG PHE SER VAL ARG GLY GLU GLY GLU GLY ASP ALA THR SEQRES 4 E 229 ASN GLY ARG LEU THR LEU ARG PHE ILE CYS THR THR GLY SEQRES 5 E 229 ARG LEU PRO VAL PRO TRP PRO THR LEU VAL THR THR LEU SEQRES 6 E 229 CRO VAL GLN CYS PHE SER ARG TYR PRO ASP HIS MET ARG SEQRES 7 E 229 ARG HIS ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR SEQRES 8 E 229 VAL GLN GLU ARG THR ILE SER PHE ARG ASP ASP GLY THR SEQRES 9 E 229 TYR ARG THR ARG ALA VAL VAL ARG PHE GLU GLY ASN THR SEQRES 10 E 229 LEU VAL ASN ARG ILE GLU LEU ARG GLY THR ASN PHE ARG SEQRES 11 E 229 GLU ASP GLY ASN ILE LEU GLY HIS ARG LEU GLU TYR ASN SEQRES 12 E 229 TYR ASN SER HIS ASN VAL TYR ILE THR ALA ASP ARG GLN SEQRES 13 E 229 ARG ASN GLY ILE ARG ALA ASN PHE THR ILE ARG HIS ASN SEQRES 14 E 229 VAL GLU ASP GLY SER VAL GLN LEU ALA ASN HIS TYR GLN SEQRES 15 E 229 GLN ASN THR PRO ILE GLY ASN GLY PRO VAL LEU LEU PRO SEQRES 16 E 229 ASP ASP HIS TYR LEU SER THR GLN THR ALA LEU SER ARG SEQRES 17 E 229 ASP PRO ASN GLU ARG ARG ASP HIS MET VAL LEU LEU GLU SEQRES 18 E 229 PHE VAL THR ALA ALA GLY ILE THR HET CRO B 65 22 HET CRO E 65 22 HET MPD B 301 8 HET MPD B 302 8 HET MPD B 303 8 HET CU B 304 1 HET CU B 305 1 HET CA B 306 1 HET MPD E 301 8 HET MPD E 302 8 HET MPD E 303 8 HET CU E 304 1 HET CU E 305 1 HET CA E 306 1 HETNAM CRO {2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4- HETNAM 2 CRO HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1- HETNAM 3 CRO YL}ACETIC ACID HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM CU COPPER (II) ION HETNAM CA CALCIUM ION HETSYN CRO PEPTIDE DERIVED CHROMOPHORE FORMUL 1 CRO 2(C15 H17 N3 O5) FORMUL 3 MPD 6(C6 H14 O2) FORMUL 6 CU 4(CU 2+) FORMUL 8 CA 2(CA 2+) FORMUL 15 HOH *588(H2 O) HELIX 1 AA1 ARG B 3 THR B 9 5 7 HELIX 2 AA2 PRO B 56 VAL B 61 5 6 HELIX 3 AA3 VAL B 66 SER B 70 5 5 HELIX 4 AA4 PRO B 73 HIS B 79 5 7 HELIX 5 AA5 ASP B 80 ALA B 85 1 6 HELIX 6 AA6 ARG B 154 ASN B 157 5 4 HELIX 7 AA7 ARG E 3 THR E 9 5 7 HELIX 8 AA8 PRO E 56 VAL E 61 5 6 HELIX 9 AA9 VAL E 66 SER E 70 5 5 HELIX 10 AB1 PRO E 73 HIS E 79 5 7 HELIX 11 AB2 ASP E 80 ALA E 85 1 6 HELIX 12 AB3 ARG E 154 ASN E 157 5 4 SHEET 1 AA112 VAL B 12 VAL B 22 0 SHEET 2 AA112 HIS B 25 ASP B 36 -1 O PHE B 27 N GLY B 20 SHEET 3 AA112 ARG B 41 CYS B 48 -1 O ILE B 47 N ARG B 30 SHEET 4 AA112 HIS B 215 ALA B 225 -1 O LEU B 218 N LEU B 44 SHEET 5 AA112 HIS B 197 SER B 206 -1 N SER B 200 O THR B 223 SHEET 6 AA112 HIS B 146 ASP B 153 -1 N ILE B 150 O HIS B 197 SHEET 7 AA112 GLY B 158 ASN B 168 -1 O GLY B 158 N ASP B 153 SHEET 8 AA112 VAL B 174 PRO B 185 -1 O HIS B 179 N PHE B 163 SHEET 9 AA112 TYR B 90 PHE B 98 -1 N VAL B 91 O THR B 184 SHEET 10 AA112 THR B 103 GLU B 113 -1 O TYR B 104 N ILE B 96 SHEET 11 AA112 THR B 116 THR B 126 -1 O VAL B 118 N ARG B 111 SHEET 12 AA112 VAL B 12 VAL B 22 1 N ASP B 21 O GLY B 125 SHEET 1 AA212 VAL E 11 VAL E 22 0 SHEET 2 AA212 HIS E 25 ASP E 36 -1 O PHE E 27 N GLY E 20 SHEET 3 AA212 ARG E 41 CYS E 48 -1 O ARG E 41 N ASP E 36 SHEET 4 AA212 HIS E 215 ALA E 225 -1 O MET E 216 N PHE E 46 SHEET 5 AA212 HIS E 197 SER E 206 -1 N SER E 200 O THR E 223 SHEET 6 AA212 HIS E 146 ASP E 153 -1 N HIS E 146 O THR E 201 SHEET 7 AA212 GLY E 158 ASN E 168 -1 O GLY E 158 N ASP E 153 SHEET 8 AA212 VAL E 174 PRO E 185 -1 O HIS E 179 N PHE E 163 SHEET 9 AA212 TYR E 90 PHE E 98 -1 N VAL E 91 O THR E 184 SHEET 10 AA212 THR E 103 GLU E 113 -1 O TYR E 104 N ILE E 96 SHEET 11 AA212 THR E 116 THR E 126 -1 O VAL E 118 N ARG E 111 SHEET 12 AA212 VAL E 11 VAL E 22 1 N ASP E 21 O GLY E 125 LINK C LEU B 64 N1 CRO B 65 1555 1555 1.28 LINK C3 CRO B 65 N VAL B 66 1555 1555 1.30 LINK C LEU E 64 N1 CRO E 65 1555 1555 1.29 LINK C3 CRO E 65 N VAL E 66 1555 1555 1.30 LINK N GLY B 0 CU CU B 304 1555 1555 2.03 LINK N HIS B 1 CU CU B 304 1555 1555 2.04 LINK ND1 HIS B 1 CU CU B 304 1555 1555 2.03 LINK NE2 HIS B 25 CU CU B 305 1555 1555 2.03 LINK OD2 ASP B 74 CU CU B 304 1555 2555 2.00 LINK OE1 GLU B 130 CU CU B 305 1555 1555 2.12 LINK OE2 GLU B 130 CU CU B 305 1555 1555 2.13 LINK O HIS B 137 CU CU E 304 1555 2545 2.49 LINK OE1 GLU B 140 CA CA B 306 1555 1555 2.37 LINK OE2 GLU B 140 CA CA B 306 1555 1555 2.31 LINK OE2 GLU B 170 CU CU E 304 1555 2545 1.84 LINK CU CU B 304 O HOH B 632 1555 1555 2.38 LINK CU CU B 305 O HOH B 525 1555 1555 2.42 LINK CA CA B 306 O HOH B 406 1555 1555 2.32 LINK CA CA B 306 O HOH B 455 1555 1555 2.32 LINK CA CA B 306 O HOH B 524 1555 1555 2.33 LINK CA CA B 306 O HOH B 630 1555 1555 2.33 LINK CA CA B 306 O HOH B 689 1555 1555 2.33 LINK N GLY E 0 CU CU E 304 1555 1555 2.03 LINK N HIS E 1 CU CU E 304 1555 1555 2.03 LINK ND1 HIS E 1 CU CU E 304 1555 1555 2.03 LINK NE2 HIS E 25 CU CU E 305 1555 1555 2.01 LINK NE2 HIS E 75 CU CU E 305 1555 1455 2.06 LINK OE1 GLU E 130 CU CU E 305 1555 1555 2.19 LINK OE1 GLU E 140 CA CA E 306 1555 1555 2.34 LINK OE2 GLU E 140 CA CA E 306 1555 1555 2.31 LINK CU CU E 305 O HOH E 403 1555 1555 2.10 LINK CU CU E 305 O HOH E 595 1555 1655 2.60 LINK CA CA E 306 O HOH E 417 1555 1555 2.31 LINK CA CA E 306 O HOH E 450 1555 1555 2.33 LINK CA CA E 306 O HOH E 463 1555 1555 2.32 LINK CA CA E 306 O HOH E 610 1555 1555 2.33 LINK CA CA E 306 O HOH E 681 1555 1555 2.33 CISPEP 1 MET B 86 PRO B 87 0 8.50 CISPEP 2 MET E 86 PRO E 87 0 8.62 CRYST1 53.476 99.307 102.011 90.00 90.00 90.00 P 2 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018700 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010070 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009803 0.00000