data_6RYJ # _entry.id 6RYJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6RYJ pdb_00006ryj 10.2210/pdb6ryj/pdb WWPDB D_1292102845 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-10-09 2 'Structure model' 1 1 2019-11-20 3 'Structure model' 1 2 2024-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model 7 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation_author.identifier_ORCID' 5 3 'Structure model' '_database_2.pdbx_DOI' 6 3 'Structure model' '_database_2.pdbx_database_accession' 7 3 'Structure model' '_struct_conn.pdbx_dist_value' 8 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 9 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 10 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6RYJ _pdbx_database_status.recvd_initial_deposition_date 2019-06-10 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB '6RYG is native structure' 6RYG unspecified PDB 'GlcNAc bound' 6RYM unspecified PDB 'GlcNAc-alpha-1-phosphate bound' 6RYN unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Shrive, A.K.' 1 0000-0002-8174-0769 'Greenhough, T.J.' 2 0000-0002-2180-5110 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Biol.Chem. _citation.journal_id_ASTM JBCHA3 _citation.journal_id_CSD 0071 _citation.journal_id_ISSN 1083-351X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 294 _citation.language ? _citation.page_first 17155 _citation.page_last 17165 _citation.title ;Atomic-resolution crystal structures of the immune protein conglutinin from cow reveal specific interactions of its binding site withN-acetylglucosamine. ; _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1074/jbc.RA119.010271 _citation.pdbx_database_id_PubMed 31562242 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Paterson, J.M.' 1 ? primary 'Shaw, A.J.' 2 ? primary 'Burns, I.' 3 ? primary 'Dodds, A.W.' 4 ? primary 'Prasad, A.' 5 ? primary 'Reid, K.B.' 6 ? primary 'Greenhough, T.J.' 7 ? primary 'Shrive, A.K.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Conglutinin 14082.562 1 ? ? 'carbohydrate recognition domain' ? 2 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 4 water nat water 18.015 101 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;KAVLFPDGQAVGEKIFKTAGAVKSYSDAEQLCREAKGQLASPRSSAENEAVTQMVRAQEKNAYLSMNDISTEGRFTYPTG EILVYSNWADGEPNNSDEGQPENCVEIFPDGKWNDVPCSKQLLVICEF ; _entity_poly.pdbx_seq_one_letter_code_can ;KAVLFPDGQAVGEKIFKTAGAVKSYSDAEQLCREAKGQLASPRSSAENEAVTQMVRAQEKNAYLSMNDISTEGRFTYPTG EILVYSNWADGEPNNSDEGQPENCVEIFPDGKWNDVPCSKQLLVICEF ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 1,2-ETHANEDIOL EDO 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 ALA n 1 3 VAL n 1 4 LEU n 1 5 PHE n 1 6 PRO n 1 7 ASP n 1 8 GLY n 1 9 GLN n 1 10 ALA n 1 11 VAL n 1 12 GLY n 1 13 GLU n 1 14 LYS n 1 15 ILE n 1 16 PHE n 1 17 LYS n 1 18 THR n 1 19 ALA n 1 20 GLY n 1 21 ALA n 1 22 VAL n 1 23 LYS n 1 24 SER n 1 25 TYR n 1 26 SER n 1 27 ASP n 1 28 ALA n 1 29 GLU n 1 30 GLN n 1 31 LEU n 1 32 CYS n 1 33 ARG n 1 34 GLU n 1 35 ALA n 1 36 LYS n 1 37 GLY n 1 38 GLN n 1 39 LEU n 1 40 ALA n 1 41 SER n 1 42 PRO n 1 43 ARG n 1 44 SER n 1 45 SER n 1 46 ALA n 1 47 GLU n 1 48 ASN n 1 49 GLU n 1 50 ALA n 1 51 VAL n 1 52 THR n 1 53 GLN n 1 54 MET n 1 55 VAL n 1 56 ARG n 1 57 ALA n 1 58 GLN n 1 59 GLU n 1 60 LYS n 1 61 ASN n 1 62 ALA n 1 63 TYR n 1 64 LEU n 1 65 SER n 1 66 MET n 1 67 ASN n 1 68 ASP n 1 69 ILE n 1 70 SER n 1 71 THR n 1 72 GLU n 1 73 GLY n 1 74 ARG n 1 75 PHE n 1 76 THR n 1 77 TYR n 1 78 PRO n 1 79 THR n 1 80 GLY n 1 81 GLU n 1 82 ILE n 1 83 LEU n 1 84 VAL n 1 85 TYR n 1 86 SER n 1 87 ASN n 1 88 TRP n 1 89 ALA n 1 90 ASP n 1 91 GLY n 1 92 GLU n 1 93 PRO n 1 94 ASN n 1 95 ASN n 1 96 SER n 1 97 ASP n 1 98 GLU n 1 99 GLY n 1 100 GLN n 1 101 PRO n 1 102 GLU n 1 103 ASN n 1 104 CYS n 1 105 VAL n 1 106 GLU n 1 107 ILE n 1 108 PHE n 1 109 PRO n 1 110 ASP n 1 111 GLY n 1 112 LYS n 1 113 TRP n 1 114 ASN n 1 115 ASP n 1 116 VAL n 1 117 PRO n 1 118 CYS n 1 119 SER n 1 120 LYS n 1 121 GLN n 1 122 LEU n 1 123 LEU n 1 124 VAL n 1 125 ILE n 1 126 CYS n 1 127 GLU n 1 128 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 128 _entity_src_gen.gene_src_common_name Bovine _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CGN1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bos taurus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9913 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 224 ? ? ? A . n A 1 2 ALA 2 225 ? ? ? A . n A 1 3 VAL 3 226 ? ? ? A . n A 1 4 LEU 4 227 ? ? ? A . n A 1 5 PHE 5 228 ? ? ? A . n A 1 6 PRO 6 229 ? ? ? A . n A 1 7 ASP 7 230 230 ASP ASP A . n A 1 8 GLY 8 231 231 GLY GLY A . n A 1 9 GLN 9 232 232 GLN GLN A . n A 1 10 ALA 10 233 233 ALA ALA A . n A 1 11 VAL 11 234 234 VAL VAL A . n A 1 12 GLY 12 235 235 GLY GLY A . n A 1 13 GLU 13 236 236 GLU GLU A . n A 1 14 LYS 14 237 237 LYS LYS A . n A 1 15 ILE 15 238 238 ILE ILE A . n A 1 16 PHE 16 239 239 PHE PHE A . n A 1 17 LYS 17 240 240 LYS LYS A . n A 1 18 THR 18 241 241 THR THR A . n A 1 19 ALA 19 242 242 ALA ALA A . n A 1 20 GLY 20 243 243 GLY GLY A . n A 1 21 ALA 21 244 244 ALA ALA A . n A 1 22 VAL 22 245 245 VAL VAL A . n A 1 23 LYS 23 246 246 LYS LYS A . n A 1 24 SER 24 247 247 SER SER A . n A 1 25 TYR 25 248 248 TYR TYR A . n A 1 26 SER 26 249 249 SER SER A . n A 1 27 ASP 27 250 250 ASP ASP A . n A 1 28 ALA 28 251 251 ALA ALA A . n A 1 29 GLU 29 252 252 GLU GLU A . n A 1 30 GLN 30 253 253 GLN GLN A . n A 1 31 LEU 31 254 254 LEU LEU A . n A 1 32 CYS 32 255 255 CYS CYS A . n A 1 33 ARG 33 256 256 ARG ARG A . n A 1 34 GLU 34 257 257 GLU GLU A . n A 1 35 ALA 35 258 258 ALA ALA A . n A 1 36 LYS 36 259 259 LYS LYS A . n A 1 37 GLY 37 260 260 GLY GLY A . n A 1 38 GLN 38 261 261 GLN GLN A . n A 1 39 LEU 39 262 262 LEU LEU A . n A 1 40 ALA 40 263 263 ALA ALA A . n A 1 41 SER 41 264 264 SER SER A . n A 1 42 PRO 42 265 265 PRO PRO A . n A 1 43 ARG 43 266 266 ARG ARG A . n A 1 44 SER 44 267 267 SER SER A . n A 1 45 SER 45 268 268 SER SER A . n A 1 46 ALA 46 269 269 ALA ALA A . n A 1 47 GLU 47 270 270 GLU GLU A . n A 1 48 ASN 48 271 271 ASN ASN A . n A 1 49 GLU 49 272 272 GLU GLU A . n A 1 50 ALA 50 273 273 ALA ALA A . n A 1 51 VAL 51 274 274 VAL VAL A . n A 1 52 THR 52 275 275 THR THR A . n A 1 53 GLN 53 276 276 GLN GLN A . n A 1 54 MET 54 277 277 MET MET A . n A 1 55 VAL 55 278 278 VAL VAL A . n A 1 56 ARG 56 279 279 ARG ARG A . n A 1 57 ALA 57 280 280 ALA ALA A . n A 1 58 GLN 58 281 281 GLN GLN A . n A 1 59 GLU 59 282 282 GLU GLU A . n A 1 60 LYS 60 283 283 LYS LYS A . n A 1 61 ASN 61 284 284 ASN ASN A . n A 1 62 ALA 62 285 285 ALA ALA A . n A 1 63 TYR 63 286 286 TYR TYR A . n A 1 64 LEU 64 287 287 LEU LEU A . n A 1 65 SER 65 288 288 SER SER A . n A 1 66 MET 66 289 289 MET MET A . n A 1 67 ASN 67 290 290 ASN ASN A . n A 1 68 ASP 68 291 291 ASP ASP A . n A 1 69 ILE 69 292 292 ILE ILE A . n A 1 70 SER 70 293 293 SER SER A . n A 1 71 THR 71 294 294 THR THR A . n A 1 72 GLU 72 295 295 GLU GLU A . n A 1 73 GLY 73 296 296 GLY GLY A . n A 1 74 ARG 74 297 297 ARG ARG A . n A 1 75 PHE 75 298 298 PHE PHE A . n A 1 76 THR 76 299 299 THR THR A . n A 1 77 TYR 77 300 300 TYR TYR A . n A 1 78 PRO 78 301 301 PRO PRO A . n A 1 79 THR 79 302 302 THR THR A . n A 1 80 GLY 80 303 303 GLY GLY A . n A 1 81 GLU 81 304 304 GLU GLU A . n A 1 82 ILE 82 305 305 ILE ILE A . n A 1 83 LEU 83 306 306 LEU LEU A . n A 1 84 VAL 84 307 307 VAL VAL A . n A 1 85 TYR 85 308 308 TYR TYR A . n A 1 86 SER 86 309 309 SER SER A . n A 1 87 ASN 87 310 310 ASN ASN A . n A 1 88 TRP 88 311 311 TRP TRP A . n A 1 89 ALA 89 312 312 ALA ALA A . n A 1 90 ASP 90 313 313 ASP ASP A . n A 1 91 GLY 91 314 314 GLY GLY A . n A 1 92 GLU 92 315 315 GLU GLU A . n A 1 93 PRO 93 316 316 PRO PRO A . n A 1 94 ASN 94 317 317 ASN ASN A . n A 1 95 ASN 95 318 318 ASN ASN A . n A 1 96 SER 96 319 319 SER SER A . n A 1 97 ASP 97 320 320 ASP ASP A . n A 1 98 GLU 98 321 321 GLU GLU A . n A 1 99 GLY 99 322 322 GLY GLY A . n A 1 100 GLN 100 323 323 GLN GLN A . n A 1 101 PRO 101 324 324 PRO PRO A . n A 1 102 GLU 102 325 325 GLU GLU A . n A 1 103 ASN 103 326 326 ASN ASN A . n A 1 104 CYS 104 327 327 CYS CYS A . n A 1 105 VAL 105 328 328 VAL VAL A . n A 1 106 GLU 106 329 329 GLU GLU A . n A 1 107 ILE 107 330 330 ILE ILE A . n A 1 108 PHE 108 331 331 PHE PHE A . n A 1 109 PRO 109 332 332 PRO PRO A . n A 1 110 ASP 110 333 333 ASP ASP A . n A 1 111 GLY 111 334 334 GLY GLY A . n A 1 112 LYS 112 335 335 LYS LYS A . n A 1 113 TRP 113 336 336 TRP TRP A . n A 1 114 ASN 114 337 337 ASN ASN A . n A 1 115 ASP 115 338 338 ASP ASP A . n A 1 116 VAL 116 339 339 VAL VAL A . n A 1 117 PRO 117 340 340 PRO PRO A . n A 1 118 CYS 118 341 341 CYS CYS A . n A 1 119 SER 119 342 342 SER SER A . n A 1 120 LYS 120 343 343 LYS LYS A . n A 1 121 GLN 121 344 344 GLN GLN A . n A 1 122 LEU 122 345 345 LEU LEU A . n A 1 123 LEU 123 346 346 LEU LEU A . n A 1 124 VAL 124 347 347 VAL VAL A . n A 1 125 ILE 125 348 348 ILE ILE A . n A 1 126 CYS 126 349 349 CYS CYS A . n A 1 127 GLU 127 350 350 GLU GLU A . n A 1 128 PHE 128 351 351 PHE PHE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 400 400 CA CA A . C 2 CA 1 401 401 CA CA A . D 3 EDO 1 402 402 EDO EDO A . E 4 HOH 1 501 32 HOH HOH A . E 4 HOH 2 502 97 HOH HOH A . E 4 HOH 3 503 95 HOH HOH A . E 4 HOH 4 504 3 HOH HOH A . E 4 HOH 5 505 40 HOH HOH A . E 4 HOH 6 506 37 HOH HOH A . E 4 HOH 7 507 55 HOH HOH A . E 4 HOH 8 508 45 HOH HOH A . E 4 HOH 9 509 26 HOH HOH A . E 4 HOH 10 510 100 HOH HOH A . E 4 HOH 11 511 93 HOH HOH A . E 4 HOH 12 512 78 HOH HOH A . E 4 HOH 13 513 79 HOH HOH A . E 4 HOH 14 514 12 HOH HOH A . E 4 HOH 15 515 14 HOH HOH A . E 4 HOH 16 516 83 HOH HOH A . E 4 HOH 17 517 33 HOH HOH A . E 4 HOH 18 518 34 HOH HOH A . E 4 HOH 19 519 27 HOH HOH A . E 4 HOH 20 520 30 HOH HOH A . E 4 HOH 21 521 38 HOH HOH A . E 4 HOH 22 522 2 HOH HOH A . E 4 HOH 23 523 44 HOH HOH A . E 4 HOH 24 524 58 HOH HOH A . E 4 HOH 25 525 31 HOH HOH A . E 4 HOH 26 526 35 HOH HOH A . E 4 HOH 27 527 56 HOH HOH A . E 4 HOH 28 528 36 HOH HOH A . E 4 HOH 29 529 16 HOH HOH A . E 4 HOH 30 530 74 HOH HOH A . E 4 HOH 31 531 46 HOH HOH A . E 4 HOH 32 532 1 HOH HOH A . E 4 HOH 33 533 8 HOH HOH A . E 4 HOH 34 534 7 HOH HOH A . E 4 HOH 35 535 6 HOH HOH A . E 4 HOH 36 536 53 HOH HOH A . E 4 HOH 37 537 90 HOH HOH A . E 4 HOH 38 538 50 HOH HOH A . E 4 HOH 39 539 76 HOH HOH A . E 4 HOH 40 540 59 HOH HOH A . E 4 HOH 41 541 4 HOH HOH A . E 4 HOH 42 542 21 HOH HOH A . E 4 HOH 43 543 17 HOH HOH A . E 4 HOH 44 544 52 HOH HOH A . E 4 HOH 45 545 29 HOH HOH A . E 4 HOH 46 546 47 HOH HOH A . E 4 HOH 47 547 86 HOH HOH A . E 4 HOH 48 548 18 HOH HOH A . E 4 HOH 49 549 11 HOH HOH A . E 4 HOH 50 550 20 HOH HOH A . E 4 HOH 51 551 5 HOH HOH A . E 4 HOH 52 552 42 HOH HOH A . E 4 HOH 53 553 39 HOH HOH A . E 4 HOH 54 554 54 HOH HOH A . E 4 HOH 55 555 13 HOH HOH A . E 4 HOH 56 556 25 HOH HOH A . E 4 HOH 57 557 65 HOH HOH A . E 4 HOH 58 558 70 HOH HOH A . E 4 HOH 59 559 23 HOH HOH A . E 4 HOH 60 560 15 HOH HOH A . E 4 HOH 61 561 84 HOH HOH A . E 4 HOH 62 562 43 HOH HOH A . E 4 HOH 63 563 10 HOH HOH A . E 4 HOH 64 564 87 HOH HOH A . E 4 HOH 65 565 19 HOH HOH A . E 4 HOH 66 566 22 HOH HOH A . E 4 HOH 67 567 94 HOH HOH A . E 4 HOH 68 568 51 HOH HOH A . E 4 HOH 69 569 92 HOH HOH A . E 4 HOH 70 570 9 HOH HOH A . E 4 HOH 71 571 41 HOH HOH A . E 4 HOH 72 572 69 HOH HOH A . E 4 HOH 73 573 49 HOH HOH A . E 4 HOH 74 574 62 HOH HOH A . E 4 HOH 75 575 57 HOH HOH A . E 4 HOH 76 576 28 HOH HOH A . E 4 HOH 77 577 61 HOH HOH A . E 4 HOH 78 578 82 HOH HOH A . E 4 HOH 79 579 85 HOH HOH A . E 4 HOH 80 580 24 HOH HOH A . E 4 HOH 81 581 98 HOH HOH A . E 4 HOH 82 582 48 HOH HOH A . E 4 HOH 83 583 67 HOH HOH A . E 4 HOH 84 584 64 HOH HOH A . E 4 HOH 85 585 81 HOH HOH A . E 4 HOH 86 586 99 HOH HOH A . E 4 HOH 87 587 88 HOH HOH A . E 4 HOH 88 588 71 HOH HOH A . E 4 HOH 89 589 91 HOH HOH A . E 4 HOH 90 590 80 HOH HOH A . E 4 HOH 91 591 72 HOH HOH A . E 4 HOH 92 592 89 HOH HOH A . E 4 HOH 93 593 75 HOH HOH A . E 4 HOH 94 594 60 HOH HOH A . E 4 HOH 95 595 101 HOH HOH A . E 4 HOH 96 596 96 HOH HOH A . E 4 HOH 97 597 66 HOH HOH A . E 4 HOH 98 598 73 HOH HOH A . E 4 HOH 99 599 63 HOH HOH A . E 4 HOH 100 600 77 HOH HOH A . E 4 HOH 101 601 68 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? 'Andrew G.W. Leslie' andrew@mrc-lmb.cam.ac.uk ? ? ? ? ? http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ ? MOSFLM ? ? package . 1 ? 'data scaling' ? ? 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 22/04/2002 ? ? ? Fortran_77 http://www.ccp4.ac.uk/dist/html/scala.html ? SCALA ? ? other 3.1.4 2 ? phasing ? ? 'Jorge Navaza' ccp4@ccp4.ac.uk ? ? ? ? Fortran_77 http://www.ccp4.ac.uk/ ? AMoRE ? ? program . 3 ? refinement ? ? 'Garib N. Murshudov' garib@ysbl.york.ac.uk ? ? ? ? Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html ? REFMAC ? ? program 5.8.0238 4 ? 'data extraction' ? ? PDB deposit@deposit.rcsb.org 'Apr. 1, 2019' ? ? ? C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ ? PDB_EXTRACT ? ? package 3.25 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6RYJ _cell.details ? _cell.formula_units_Z ? _cell.length_a 50.822 _cell.length_a_esd ? _cell.length_b 50.822 _cell.length_b_esd ? _cell.length_c 52.837 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6RYJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6RYJ _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.42 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 49.23 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity 0.300 _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '2.5 M ammonium sulfate, 0.1 M tris' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 4r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2004-03-04 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.985 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SRS BEAMLINE PX14.2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.985 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline PX14.2 _diffrn_source.pdbx_synchrotron_site SRS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6RYJ _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.250 _reflns.d_resolution_low 52.868 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 35164 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 94.300 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 9.900 _reflns.pdbx_Rmerge_I_obs 0.034 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.034 _reflns.pdbx_netI_over_av_sigmaI 12.300 _reflns.pdbx_netI_over_sigmaI 27.500 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.039 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 348475 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.250 1.290 ? 3.500 ? ? ? ? 2367 66.900 ? ? ? ? 0.199 ? ? ? ? ? ? ? ? 4.300 0.199 ? ? ? 0.269 ? ? 1 1 ? ? 1.290 1.380 ? 4.600 ? ? ? ? 5181 85.700 ? ? ? ? 0.158 ? ? ? ? ? ? ? ? 5.500 0.158 ? ? ? 0.205 ? ? 2 1 ? ? 1.380 1.490 ? 6.700 ? ? ? ? 5625 98.900 ? ? ? ? 0.113 ? ? ? ? ? ? ? ? 8.400 0.113 ? ? ? 0.136 ? ? 3 1 ? ? 1.490 1.630 ? 10.700 ? ? ? ? 5210 100.000 ? ? ? ? 0.068 ? ? ? ? ? ? ? ? 9.200 0.068 ? ? ? 0.081 ? ? 4 1 ? ? 1.630 1.830 ? 15.500 ? ? ? ? 4739 99.900 ? ? ? ? 0.044 ? ? ? ? ? ? ? ? 9.300 0.044 ? ? ? 0.053 ? ? 5 1 ? ? 1.830 2.110 ? 14.400 ? ? ? ? 4179 100.000 ? ? ? ? 0.041 ? ? ? ? ? ? ? ? 11.100 0.041 ? ? ? 0.047 ? ? 6 1 ? ? 2.110 2.580 ? 17.000 ? ? ? ? 3539 100.000 ? ? ? ? 0.038 ? ? ? ? ? ? ? ? 16.300 0.038 ? ? ? 0.042 ? ? 7 1 ? ? 2.580 3.660 ? 20.100 ? ? ? ? 2771 100.000 ? ? ? ? 0.030 ? ? ? ? ? ? ? ? 16.400 0.030 ? ? ? 0.033 ? ? 8 1 ? ? 3.660 52.868 ? 21.100 ? ? ? ? 1553 100.000 ? ? ? ? 0.027 ? ? ? ? ? ? ? ? 13.500 0.027 ? ? ? 0.030 ? ? 9 1 ? ? # _refine.aniso_B[1][1] -0.2200 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] -0.2200 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 0.4300 _refine.B_iso_max 58.500 _refine.B_iso_mean 15.1010 _refine.B_iso_min 6.900 _refine.correlation_coeff_Fo_to_Fc 0.9640 _refine.correlation_coeff_Fo_to_Fc_free 0.9500 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6RYJ _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.2500 _refine.ls_d_res_low 50.6400 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 33397 _refine.ls_number_reflns_R_free 1738 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 94.1800 _refine.ls_percent_reflns_R_free 4.9000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1820 _refine.ls_R_factor_R_free 0.2030 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1810 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'pdbid 1pw9' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.0450 _refine.pdbx_overall_ESU_R_Free 0.0470 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 0.6160 _refine.overall_SU_ML 0.0280 _refine.overall_SU_R_Cruickshank_DPI 0.0446 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.2500 _refine_hist.d_res_low 50.6400 _refine_hist.number_atoms_solvent 101 _refine_hist.number_atoms_total 1047 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 122 _refine_hist.pdbx_B_iso_mean_ligand 21.67 _refine_hist.pdbx_B_iso_mean_solvent 24.14 _refine_hist.pdbx_number_atoms_protein 940 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 0.013 969 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.018 843 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.682 1.648 1313 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.347 1.578 1980 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.381 5.000 123 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 34.255 25.094 53 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 10.872 15.000 161 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 8.923 15.000 4 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.071 0.200 124 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 0.020 1119 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 185 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.2500 _refine_ls_shell.d_res_low 1.2820 _refine_ls_shell.number_reflns_all 1783 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 82 _refine_ls_shell.number_reflns_R_work 1701 _refine_ls_shell.percent_reflns_obs 64.8400 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2420 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2290 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6RYJ _struct.title 'structure of conglutinin carbohydrate recognition domain with ethylene glycol bound' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6RYJ _struct_keywords.text 'carbohydrate recognition domain, lectin, collectin, sugar binding protein, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CONG_BOVIN _struct_ref.pdbx_db_accession P23805 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KAVLFPDGQAVGEKIFKTAGAVKSYSDAEQLCREAKGQLASPRSSAENEAVTQMVRAQEKNAYLSMNDISTEGRFTYPTG EILVYSNWADGEPNNSDEGQPENCVEIFPDGKWNDVPCSKQLLVICEF ; _struct_ref.pdbx_align_begin 244 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6RYJ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 128 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P23805 _struct_ref_seq.db_align_beg 244 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 371 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 224 _struct_ref_seq.pdbx_auth_seq_align_end 351 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 390 ? 1 MORE -22 ? 1 'SSA (A^2)' 6630 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ;From known literature, active molecule is composed of four trimeric units - trimeric unit is composed of N-terminal domain, collagen-like helix, alpha-helical coiled-coil and 3 carbohydrate recognition domains. As the structure only contains a carbohydrate recognition domain, it is only a monomer. ; # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 24 ? ALA A 35 ? SER A 247 ALA A 258 1 ? 12 HELX_P HELX_P2 AA2 SER A 44 ? GLU A 59 ? SER A 267 GLU A 282 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 32 SG ? ? ? 1_555 A CYS 126 SG ? ? A CYS 255 A CYS 349 1_555 ? ? ? ? ? ? ? 2.121 ? ? disulf2 disulf ? ? A CYS 104 SG ? ? ? 1_555 A CYS 118 SG ? ? A CYS 327 A CYS 341 1_555 ? ? ? ? ? ? ? 2.047 ? ? metalc1 metalc ? ? A ASP 68 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 291 A CA 401 1_555 ? ? ? ? ? ? ? 2.857 ? ? metalc2 metalc ? ? A ASP 68 OD2 ? ? ? 1_555 C CA . CA ? ? A ASP 291 A CA 401 1_555 ? ? ? ? ? ? ? 2.328 ? ? metalc3 metalc ? ? A GLU 72 OE1 ? ? ? 1_555 C CA . CA ? ? A GLU 295 A CA 401 1_555 ? ? ? ? ? ? ? 3.120 ? ? metalc4 metalc ? ? A GLU 72 OE2 ? ? ? 1_555 C CA . CA ? ? A GLU 295 A CA 401 1_555 ? ? ? ? ? ? ? 2.720 ? ? metalc5 metalc ? ? A GLU 92 OE1 ? ? ? 1_555 B CA . CA ? ? A GLU 315 A CA 400 1_555 ? ? ? ? ? ? ? 2.616 ? ? metalc6 metalc ? ? A ASN 94 OD1 ? ? ? 1_555 B CA . CA ? ? A ASN 317 A CA 400 1_555 ? ? ? ? ? ? ? 2.481 ? ? metalc7 metalc ? ? A ASN 95 OD1 ? ? ? 1_555 C CA . CA ? ? A ASN 318 A CA 401 1_555 ? ? ? ? ? ? ? 3.141 ? ? metalc8 metalc ? ? A GLU 102 OE1 ? ? ? 1_555 B CA . CA ? ? A GLU 325 A CA 400 1_555 ? ? ? ? ? ? ? 2.532 ? ? metalc9 metalc ? ? A GLU 102 O ? ? ? 1_555 C CA . CA ? ? A GLU 325 A CA 401 1_555 ? ? ? ? ? ? ? 2.826 ? ? metalc10 metalc ? ? A ASN 103 OD1 ? ? ? 1_555 C CA . CA ? ? A ASN 326 A CA 401 1_555 ? ? ? ? ? ? ? 3.042 ? ? metalc11 metalc ? ? A ASN 114 OD1 ? ? ? 1_555 B CA . CA ? ? A ASN 337 A CA 400 1_555 ? ? ? ? ? ? ? 2.509 ? ? metalc12 metalc ? ? A ASP 115 O ? ? ? 1_555 B CA . CA ? ? A ASP 338 A CA 400 1_555 ? ? ? ? ? ? ? 2.614 ? ? metalc13 metalc ? ? A ASP 115 OD1 ? ? ? 1_555 B CA . CA ? ? A ASP 338 A CA 400 1_555 ? ? ? ? ? ? ? 2.344 ? ? metalc14 metalc ? ? B CA . CA ? ? ? 1_555 D EDO . O1 ? ? A CA 400 A EDO 402 1_555 ? ? ? ? ? ? ? 2.567 ? ? metalc15 metalc ? ? B CA . CA ? ? ? 1_555 D EDO . O2 ? ? A CA 400 A EDO 402 1_555 ? ? ? ? ? ? ? 2.525 ? ? metalc16 metalc ? ? C CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 401 A HOH 512 1_555 ? ? ? ? ? ? ? 2.304 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 68 ? A ASP 291 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 OD2 ? A ASP 68 ? A ASP 291 ? 1_555 49.1 ? 2 OD1 ? A ASP 68 ? A ASP 291 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 OE1 ? A GLU 72 ? A GLU 295 ? 1_555 95.1 ? 3 OD2 ? A ASP 68 ? A ASP 291 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 OE1 ? A GLU 72 ? A GLU 295 ? 1_555 81.8 ? 4 OD1 ? A ASP 68 ? A ASP 291 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 OE2 ? A GLU 72 ? A GLU 295 ? 1_555 128.3 ? 5 OD2 ? A ASP 68 ? A ASP 291 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 OE2 ? A GLU 72 ? A GLU 295 ? 1_555 88.6 ? 6 OE1 ? A GLU 72 ? A GLU 295 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 OE2 ? A GLU 72 ? A GLU 295 ? 1_555 43.6 ? 7 OD1 ? A ASP 68 ? A ASP 291 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 OD1 ? A ASN 95 ? A ASN 318 ? 1_555 152.6 ? 8 OD2 ? A ASP 68 ? A ASP 291 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 OD1 ? A ASN 95 ? A ASN 318 ? 1_555 157.1 ? 9 OE1 ? A GLU 72 ? A GLU 295 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 OD1 ? A ASN 95 ? A ASN 318 ? 1_555 87.0 ? 10 OE2 ? A GLU 72 ? A GLU 295 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 OD1 ? A ASN 95 ? A ASN 318 ? 1_555 69.8 ? 11 OD1 ? A ASP 68 ? A ASP 291 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 O ? A GLU 102 ? A GLU 325 ? 1_555 89.8 ? 12 OD2 ? A ASP 68 ? A ASP 291 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 O ? A GLU 102 ? A GLU 325 ? 1_555 120.6 ? 13 OE1 ? A GLU 72 ? A GLU 295 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 O ? A GLU 102 ? A GLU 325 ? 1_555 152.5 ? 14 OE2 ? A GLU 72 ? A GLU 295 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 O ? A GLU 102 ? A GLU 325 ? 1_555 141.7 ? 15 OD1 ? A ASN 95 ? A ASN 318 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 O ? A GLU 102 ? A GLU 325 ? 1_555 76.7 ? 16 OD1 ? A ASP 68 ? A ASP 291 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 OD1 ? A ASN 103 ? A ASN 326 ? 1_555 60.5 ? 17 OD2 ? A ASP 68 ? A ASP 291 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 OD1 ? A ASN 103 ? A ASN 326 ? 1_555 102.3 ? 18 OE1 ? A GLU 72 ? A GLU 295 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 OD1 ? A ASN 103 ? A ASN 326 ? 1_555 75.3 ? 19 OE2 ? A GLU 72 ? A GLU 295 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 OD1 ? A ASN 103 ? A ASN 326 ? 1_555 115.8 ? 20 OD1 ? A ASN 95 ? A ASN 318 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 OD1 ? A ASN 103 ? A ASN 326 ? 1_555 94.0 ? 21 O ? A GLU 102 ? A GLU 325 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 OD1 ? A ASN 103 ? A ASN 326 ? 1_555 83.8 ? 22 OD1 ? A ASP 68 ? A ASP 291 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 O ? E HOH . ? A HOH 512 ? 1_555 115.6 ? 23 OD2 ? A ASP 68 ? A ASP 291 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 O ? E HOH . ? A HOH 512 ? 1_555 93.9 ? 24 OE1 ? A GLU 72 ? A GLU 295 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 O ? E HOH . ? A HOH 512 ? 1_555 135.0 ? 25 OE2 ? A GLU 72 ? A GLU 295 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 O ? E HOH . ? A HOH 512 ? 1_555 91.8 ? 26 OD1 ? A ASN 95 ? A ASN 318 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 O ? E HOH . ? A HOH 512 ? 1_555 80.0 ? 27 O ? A GLU 102 ? A GLU 325 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 O ? E HOH . ? A HOH 512 ? 1_555 64.1 ? 28 OD1 ? A ASN 103 ? A ASN 326 ? 1_555 CA ? C CA . ? A CA 401 ? 1_555 O ? E HOH . ? A HOH 512 ? 1_555 147.9 ? 29 OE1 ? A GLU 92 ? A GLU 315 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 OD1 ? A ASN 94 ? A ASN 317 ? 1_555 73.2 ? 30 OE1 ? A GLU 92 ? A GLU 315 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 OE1 ? A GLU 102 ? A GLU 325 ? 1_555 145.8 ? 31 OD1 ? A ASN 94 ? A ASN 317 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 OE1 ? A GLU 102 ? A GLU 325 ? 1_555 74.6 ? 32 OE1 ? A GLU 92 ? A GLU 315 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 OD1 ? A ASN 114 ? A ASN 337 ? 1_555 67.4 ? 33 OD1 ? A ASN 94 ? A ASN 317 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 OD1 ? A ASN 114 ? A ASN 337 ? 1_555 139.2 ? 34 OE1 ? A GLU 102 ? A GLU 325 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 OD1 ? A ASN 114 ? A ASN 337 ? 1_555 146.0 ? 35 OE1 ? A GLU 92 ? A GLU 315 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 O ? A ASP 115 ? A ASP 338 ? 1_555 130.2 ? 36 OD1 ? A ASN 94 ? A ASN 317 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 O ? A ASP 115 ? A ASP 338 ? 1_555 140.8 ? 37 OE1 ? A GLU 102 ? A GLU 325 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 O ? A ASP 115 ? A ASP 338 ? 1_555 72.5 ? 38 OD1 ? A ASN 114 ? A ASN 337 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 O ? A ASP 115 ? A ASP 338 ? 1_555 76.7 ? 39 OE1 ? A GLU 92 ? A GLU 315 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 OD1 ? A ASP 115 ? A ASP 338 ? 1_555 74.8 ? 40 OD1 ? A ASN 94 ? A ASN 317 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 OD1 ? A ASP 115 ? A ASP 338 ? 1_555 82.0 ? 41 OE1 ? A GLU 102 ? A GLU 325 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 OD1 ? A ASP 115 ? A ASP 338 ? 1_555 89.3 ? 42 OD1 ? A ASN 114 ? A ASN 337 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 OD1 ? A ASP 115 ? A ASP 338 ? 1_555 97.6 ? 43 O ? A ASP 115 ? A ASP 338 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 OD1 ? A ASP 115 ? A ASP 338 ? 1_555 77.0 ? 44 OE1 ? A GLU 92 ? A GLU 315 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 O1 ? D EDO . ? A EDO 402 ? 1_555 132.6 ? 45 OD1 ? A ASN 94 ? A ASN 317 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 O1 ? D EDO . ? A EDO 402 ? 1_555 121.4 ? 46 OE1 ? A GLU 102 ? A GLU 325 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 O1 ? D EDO . ? A EDO 402 ? 1_555 75.5 ? 47 OD1 ? A ASN 114 ? A ASN 337 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 O1 ? D EDO . ? A EDO 402 ? 1_555 80.6 ? 48 O ? A ASP 115 ? A ASP 338 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 O1 ? D EDO . ? A EDO 402 ? 1_555 69.5 ? 49 OD1 ? A ASP 115 ? A ASP 338 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 O1 ? D EDO . ? A EDO 402 ? 1_555 146.0 ? 50 OE1 ? A GLU 92 ? A GLU 315 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 O2 ? D EDO . ? A EDO 402 ? 1_555 75.9 ? 51 OD1 ? A ASN 94 ? A ASN 317 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 O2 ? D EDO . ? A EDO 402 ? 1_555 78.5 ? 52 OE1 ? A GLU 102 ? A GLU 325 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 O2 ? D EDO . ? A EDO 402 ? 1_555 108.9 ? 53 OD1 ? A ASN 114 ? A ASN 337 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 O2 ? D EDO . ? A EDO 402 ? 1_555 81.9 ? 54 O ? A ASP 115 ? A ASP 338 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 O2 ? D EDO . ? A EDO 402 ? 1_555 132.4 ? 55 OD1 ? A ASP 115 ? A ASP 338 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 O2 ? D EDO . ? A EDO 402 ? 1_555 148.4 ? 56 O1 ? D EDO . ? A EDO 402 ? 1_555 CA ? B CA . ? A CA 400 ? 1_555 O2 ? D EDO . ? A EDO 402 ? 1_555 65.4 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 92 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 315 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 93 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 316 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -4.53 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 2 ? AA3 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 9 ? VAL A 11 ? GLN A 232 VAL A 234 AA1 2 LYS A 14 ? LYS A 17 ? LYS A 237 LYS A 240 AA1 3 CYS A 126 ? PHE A 128 ? CYS A 349 PHE A 351 AA1 4 GLN A 38 ? LEU A 39 ? GLN A 261 LEU A 262 AA2 1 VAL A 22 ? LYS A 23 ? VAL A 245 LYS A 246 AA2 2 LEU A 122 ? LEU A 123 ? LEU A 345 LEU A 346 AA3 1 ALA A 62 ? TYR A 63 ? ALA A 285 TYR A 286 AA3 2 CYS A 104 ? ILE A 107 ? CYS A 327 ILE A 330 AA3 3 TRP A 113 ? VAL A 116 ? TRP A 336 VAL A 339 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLN A 9 ? N GLN A 232 O PHE A 16 ? O PHE A 239 AA1 2 3 N LYS A 17 ? N LYS A 240 O CYS A 126 ? O CYS A 349 AA1 3 4 O GLU A 127 ? O GLU A 350 N GLN A 38 ? N GLN A 261 AA2 1 2 N LYS A 23 ? N LYS A 246 O LEU A 122 ? O LEU A 345 AA3 1 2 N ALA A 62 ? N ALA A 285 O ILE A 107 ? O ILE A 330 AA3 2 3 N GLU A 106 ? N GLU A 329 O ASN A 114 ? O ASN A 337 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CA 400 ? 6 'binding site for residue CA A 400' AC2 Software A CA 401 ? 6 'binding site for residue CA A 401' AC3 Software A EDO 402 ? 6 'binding site for residue EDO A 402' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 GLU A 92 ? GLU A 315 . ? 1_555 ? 2 AC1 6 ASN A 94 ? ASN A 317 . ? 1_555 ? 3 AC1 6 GLU A 102 ? GLU A 325 . ? 1_555 ? 4 AC1 6 ASN A 114 ? ASN A 337 . ? 1_555 ? 5 AC1 6 ASP A 115 ? ASP A 338 . ? 1_555 ? 6 AC1 6 EDO D . ? EDO A 402 . ? 1_555 ? 7 AC2 6 ASP A 68 ? ASP A 291 . ? 1_555 ? 8 AC2 6 GLU A 72 ? GLU A 295 . ? 1_555 ? 9 AC2 6 ASN A 95 ? ASN A 318 . ? 1_555 ? 10 AC2 6 GLU A 102 ? GLU A 325 . ? 1_555 ? 11 AC2 6 ASN A 103 ? ASN A 326 . ? 1_555 ? 12 AC2 6 HOH E . ? HOH A 512 . ? 1_555 ? 13 AC3 6 GLU A 92 ? GLU A 315 . ? 1_555 ? 14 AC3 6 ASN A 94 ? ASN A 317 . ? 1_555 ? 15 AC3 6 GLU A 102 ? GLU A 325 . ? 1_555 ? 16 AC3 6 ASN A 114 ? ASN A 337 . ? 1_555 ? 17 AC3 6 ASP A 115 ? ASP A 338 . ? 1_555 ? 18 AC3 6 CA B . ? CA A 400 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 293 ? ? -71.43 -73.82 2 1 ASN A 310 ? ? -144.42 49.59 3 1 SER A 319 ? ? -156.44 89.08 # _phasing.method MR # _pdbx_entry_details.entry_id 6RYJ _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 224 ? A LYS 1 2 1 Y 1 A ALA 225 ? A ALA 2 3 1 Y 1 A VAL 226 ? A VAL 3 4 1 Y 1 A LEU 227 ? A LEU 4 5 1 Y 1 A PHE 228 ? A PHE 5 6 1 Y 1 A PRO 229 ? A PRO 6 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 EDO C1 C N N 89 EDO O1 O N N 90 EDO C2 C N N 91 EDO O2 O N N 92 EDO H11 H N N 93 EDO H12 H N N 94 EDO HO1 H N N 95 EDO H21 H N N 96 EDO H22 H N N 97 EDO HO2 H N N 98 GLN N N N N 99 GLN CA C N S 100 GLN C C N N 101 GLN O O N N 102 GLN CB C N N 103 GLN CG C N N 104 GLN CD C N N 105 GLN OE1 O N N 106 GLN NE2 N N N 107 GLN OXT O N N 108 GLN H H N N 109 GLN H2 H N N 110 GLN HA H N N 111 GLN HB2 H N N 112 GLN HB3 H N N 113 GLN HG2 H N N 114 GLN HG3 H N N 115 GLN HE21 H N N 116 GLN HE22 H N N 117 GLN HXT H N N 118 GLU N N N N 119 GLU CA C N S 120 GLU C C N N 121 GLU O O N N 122 GLU CB C N N 123 GLU CG C N N 124 GLU CD C N N 125 GLU OE1 O N N 126 GLU OE2 O N N 127 GLU OXT O N N 128 GLU H H N N 129 GLU H2 H N N 130 GLU HA H N N 131 GLU HB2 H N N 132 GLU HB3 H N N 133 GLU HG2 H N N 134 GLU HG3 H N N 135 GLU HE2 H N N 136 GLU HXT H N N 137 GLY N N N N 138 GLY CA C N N 139 GLY C C N N 140 GLY O O N N 141 GLY OXT O N N 142 GLY H H N N 143 GLY H2 H N N 144 GLY HA2 H N N 145 GLY HA3 H N N 146 GLY HXT H N N 147 HOH O O N N 148 HOH H1 H N N 149 HOH H2 H N N 150 ILE N N N N 151 ILE CA C N S 152 ILE C C N N 153 ILE O O N N 154 ILE CB C N S 155 ILE CG1 C N N 156 ILE CG2 C N N 157 ILE CD1 C N N 158 ILE OXT O N N 159 ILE H H N N 160 ILE H2 H N N 161 ILE HA H N N 162 ILE HB H N N 163 ILE HG12 H N N 164 ILE HG13 H N N 165 ILE HG21 H N N 166 ILE HG22 H N N 167 ILE HG23 H N N 168 ILE HD11 H N N 169 ILE HD12 H N N 170 ILE HD13 H N N 171 ILE HXT H N N 172 LEU N N N N 173 LEU CA C N S 174 LEU C C N N 175 LEU O O N N 176 LEU CB C N N 177 LEU CG C N N 178 LEU CD1 C N N 179 LEU CD2 C N N 180 LEU OXT O N N 181 LEU H H N N 182 LEU H2 H N N 183 LEU HA H N N 184 LEU HB2 H N N 185 LEU HB3 H N N 186 LEU HG H N N 187 LEU HD11 H N N 188 LEU HD12 H N N 189 LEU HD13 H N N 190 LEU HD21 H N N 191 LEU HD22 H N N 192 LEU HD23 H N N 193 LEU HXT H N N 194 LYS N N N N 195 LYS CA C N S 196 LYS C C N N 197 LYS O O N N 198 LYS CB C N N 199 LYS CG C N N 200 LYS CD C N N 201 LYS CE C N N 202 LYS NZ N N N 203 LYS OXT O N N 204 LYS H H N N 205 LYS H2 H N N 206 LYS HA H N N 207 LYS HB2 H N N 208 LYS HB3 H N N 209 LYS HG2 H N N 210 LYS HG3 H N N 211 LYS HD2 H N N 212 LYS HD3 H N N 213 LYS HE2 H N N 214 LYS HE3 H N N 215 LYS HZ1 H N N 216 LYS HZ2 H N N 217 LYS HZ3 H N N 218 LYS HXT H N N 219 MET N N N N 220 MET CA C N S 221 MET C C N N 222 MET O O N N 223 MET CB C N N 224 MET CG C N N 225 MET SD S N N 226 MET CE C N N 227 MET OXT O N N 228 MET H H N N 229 MET H2 H N N 230 MET HA H N N 231 MET HB2 H N N 232 MET HB3 H N N 233 MET HG2 H N N 234 MET HG3 H N N 235 MET HE1 H N N 236 MET HE2 H N N 237 MET HE3 H N N 238 MET HXT H N N 239 PHE N N N N 240 PHE CA C N S 241 PHE C C N N 242 PHE O O N N 243 PHE CB C N N 244 PHE CG C Y N 245 PHE CD1 C Y N 246 PHE CD2 C Y N 247 PHE CE1 C Y N 248 PHE CE2 C Y N 249 PHE CZ C Y N 250 PHE OXT O N N 251 PHE H H N N 252 PHE H2 H N N 253 PHE HA H N N 254 PHE HB2 H N N 255 PHE HB3 H N N 256 PHE HD1 H N N 257 PHE HD2 H N N 258 PHE HE1 H N N 259 PHE HE2 H N N 260 PHE HZ H N N 261 PHE HXT H N N 262 PRO N N N N 263 PRO CA C N S 264 PRO C C N N 265 PRO O O N N 266 PRO CB C N N 267 PRO CG C N N 268 PRO CD C N N 269 PRO OXT O N N 270 PRO H H N N 271 PRO HA H N N 272 PRO HB2 H N N 273 PRO HB3 H N N 274 PRO HG2 H N N 275 PRO HG3 H N N 276 PRO HD2 H N N 277 PRO HD3 H N N 278 PRO HXT H N N 279 SER N N N N 280 SER CA C N S 281 SER C C N N 282 SER O O N N 283 SER CB C N N 284 SER OG O N N 285 SER OXT O N N 286 SER H H N N 287 SER H2 H N N 288 SER HA H N N 289 SER HB2 H N N 290 SER HB3 H N N 291 SER HG H N N 292 SER HXT H N N 293 THR N N N N 294 THR CA C N S 295 THR C C N N 296 THR O O N N 297 THR CB C N R 298 THR OG1 O N N 299 THR CG2 C N N 300 THR OXT O N N 301 THR H H N N 302 THR H2 H N N 303 THR HA H N N 304 THR HB H N N 305 THR HG1 H N N 306 THR HG21 H N N 307 THR HG22 H N N 308 THR HG23 H N N 309 THR HXT H N N 310 TRP N N N N 311 TRP CA C N S 312 TRP C C N N 313 TRP O O N N 314 TRP CB C N N 315 TRP CG C Y N 316 TRP CD1 C Y N 317 TRP CD2 C Y N 318 TRP NE1 N Y N 319 TRP CE2 C Y N 320 TRP CE3 C Y N 321 TRP CZ2 C Y N 322 TRP CZ3 C Y N 323 TRP CH2 C Y N 324 TRP OXT O N N 325 TRP H H N N 326 TRP H2 H N N 327 TRP HA H N N 328 TRP HB2 H N N 329 TRP HB3 H N N 330 TRP HD1 H N N 331 TRP HE1 H N N 332 TRP HE3 H N N 333 TRP HZ2 H N N 334 TRP HZ3 H N N 335 TRP HH2 H N N 336 TRP HXT H N N 337 TYR N N N N 338 TYR CA C N S 339 TYR C C N N 340 TYR O O N N 341 TYR CB C N N 342 TYR CG C Y N 343 TYR CD1 C Y N 344 TYR CD2 C Y N 345 TYR CE1 C Y N 346 TYR CE2 C Y N 347 TYR CZ C Y N 348 TYR OH O N N 349 TYR OXT O N N 350 TYR H H N N 351 TYR H2 H N N 352 TYR HA H N N 353 TYR HB2 H N N 354 TYR HB3 H N N 355 TYR HD1 H N N 356 TYR HD2 H N N 357 TYR HE1 H N N 358 TYR HE2 H N N 359 TYR HH H N N 360 TYR HXT H N N 361 VAL N N N N 362 VAL CA C N S 363 VAL C C N N 364 VAL O O N N 365 VAL CB C N N 366 VAL CG1 C N N 367 VAL CG2 C N N 368 VAL OXT O N N 369 VAL H H N N 370 VAL H2 H N N 371 VAL HA H N N 372 VAL HB H N N 373 VAL HG11 H N N 374 VAL HG12 H N N 375 VAL HG13 H N N 376 VAL HG21 H N N 377 VAL HG22 H N N 378 VAL HG23 H N N 379 VAL HXT H N N 380 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HOH O H1 sing N N 138 HOH O H2 sing N N 139 ILE N CA sing N N 140 ILE N H sing N N 141 ILE N H2 sing N N 142 ILE CA C sing N N 143 ILE CA CB sing N N 144 ILE CA HA sing N N 145 ILE C O doub N N 146 ILE C OXT sing N N 147 ILE CB CG1 sing N N 148 ILE CB CG2 sing N N 149 ILE CB HB sing N N 150 ILE CG1 CD1 sing N N 151 ILE CG1 HG12 sing N N 152 ILE CG1 HG13 sing N N 153 ILE CG2 HG21 sing N N 154 ILE CG2 HG22 sing N N 155 ILE CG2 HG23 sing N N 156 ILE CD1 HD11 sing N N 157 ILE CD1 HD12 sing N N 158 ILE CD1 HD13 sing N N 159 ILE OXT HXT sing N N 160 LEU N CA sing N N 161 LEU N H sing N N 162 LEU N H2 sing N N 163 LEU CA C sing N N 164 LEU CA CB sing N N 165 LEU CA HA sing N N 166 LEU C O doub N N 167 LEU C OXT sing N N 168 LEU CB CG sing N N 169 LEU CB HB2 sing N N 170 LEU CB HB3 sing N N 171 LEU CG CD1 sing N N 172 LEU CG CD2 sing N N 173 LEU CG HG sing N N 174 LEU CD1 HD11 sing N N 175 LEU CD1 HD12 sing N N 176 LEU CD1 HD13 sing N N 177 LEU CD2 HD21 sing N N 178 LEU CD2 HD22 sing N N 179 LEU CD2 HD23 sing N N 180 LEU OXT HXT sing N N 181 LYS N CA sing N N 182 LYS N H sing N N 183 LYS N H2 sing N N 184 LYS CA C sing N N 185 LYS CA CB sing N N 186 LYS CA HA sing N N 187 LYS C O doub N N 188 LYS C OXT sing N N 189 LYS CB CG sing N N 190 LYS CB HB2 sing N N 191 LYS CB HB3 sing N N 192 LYS CG CD sing N N 193 LYS CG HG2 sing N N 194 LYS CG HG3 sing N N 195 LYS CD CE sing N N 196 LYS CD HD2 sing N N 197 LYS CD HD3 sing N N 198 LYS CE NZ sing N N 199 LYS CE HE2 sing N N 200 LYS CE HE3 sing N N 201 LYS NZ HZ1 sing N N 202 LYS NZ HZ2 sing N N 203 LYS NZ HZ3 sing N N 204 LYS OXT HXT sing N N 205 MET N CA sing N N 206 MET N H sing N N 207 MET N H2 sing N N 208 MET CA C sing N N 209 MET CA CB sing N N 210 MET CA HA sing N N 211 MET C O doub N N 212 MET C OXT sing N N 213 MET CB CG sing N N 214 MET CB HB2 sing N N 215 MET CB HB3 sing N N 216 MET CG SD sing N N 217 MET CG HG2 sing N N 218 MET CG HG3 sing N N 219 MET SD CE sing N N 220 MET CE HE1 sing N N 221 MET CE HE2 sing N N 222 MET CE HE3 sing N N 223 MET OXT HXT sing N N 224 PHE N CA sing N N 225 PHE N H sing N N 226 PHE N H2 sing N N 227 PHE CA C sing N N 228 PHE CA CB sing N N 229 PHE CA HA sing N N 230 PHE C O doub N N 231 PHE C OXT sing N N 232 PHE CB CG sing N N 233 PHE CB HB2 sing N N 234 PHE CB HB3 sing N N 235 PHE CG CD1 doub Y N 236 PHE CG CD2 sing Y N 237 PHE CD1 CE1 sing Y N 238 PHE CD1 HD1 sing N N 239 PHE CD2 CE2 doub Y N 240 PHE CD2 HD2 sing N N 241 PHE CE1 CZ doub Y N 242 PHE CE1 HE1 sing N N 243 PHE CE2 CZ sing Y N 244 PHE CE2 HE2 sing N N 245 PHE CZ HZ sing N N 246 PHE OXT HXT sing N N 247 PRO N CA sing N N 248 PRO N CD sing N N 249 PRO N H sing N N 250 PRO CA C sing N N 251 PRO CA CB sing N N 252 PRO CA HA sing N N 253 PRO C O doub N N 254 PRO C OXT sing N N 255 PRO CB CG sing N N 256 PRO CB HB2 sing N N 257 PRO CB HB3 sing N N 258 PRO CG CD sing N N 259 PRO CG HG2 sing N N 260 PRO CG HG3 sing N N 261 PRO CD HD2 sing N N 262 PRO CD HD3 sing N N 263 PRO OXT HXT sing N N 264 SER N CA sing N N 265 SER N H sing N N 266 SER N H2 sing N N 267 SER CA C sing N N 268 SER CA CB sing N N 269 SER CA HA sing N N 270 SER C O doub N N 271 SER C OXT sing N N 272 SER CB OG sing N N 273 SER CB HB2 sing N N 274 SER CB HB3 sing N N 275 SER OG HG sing N N 276 SER OXT HXT sing N N 277 THR N CA sing N N 278 THR N H sing N N 279 THR N H2 sing N N 280 THR CA C sing N N 281 THR CA CB sing N N 282 THR CA HA sing N N 283 THR C O doub N N 284 THR C OXT sing N N 285 THR CB OG1 sing N N 286 THR CB CG2 sing N N 287 THR CB HB sing N N 288 THR OG1 HG1 sing N N 289 THR CG2 HG21 sing N N 290 THR CG2 HG22 sing N N 291 THR CG2 HG23 sing N N 292 THR OXT HXT sing N N 293 TRP N CA sing N N 294 TRP N H sing N N 295 TRP N H2 sing N N 296 TRP CA C sing N N 297 TRP CA CB sing N N 298 TRP CA HA sing N N 299 TRP C O doub N N 300 TRP C OXT sing N N 301 TRP CB CG sing N N 302 TRP CB HB2 sing N N 303 TRP CB HB3 sing N N 304 TRP CG CD1 doub Y N 305 TRP CG CD2 sing Y N 306 TRP CD1 NE1 sing Y N 307 TRP CD1 HD1 sing N N 308 TRP CD2 CE2 doub Y N 309 TRP CD2 CE3 sing Y N 310 TRP NE1 CE2 sing Y N 311 TRP NE1 HE1 sing N N 312 TRP CE2 CZ2 sing Y N 313 TRP CE3 CZ3 doub Y N 314 TRP CE3 HE3 sing N N 315 TRP CZ2 CH2 doub Y N 316 TRP CZ2 HZ2 sing N N 317 TRP CZ3 CH2 sing Y N 318 TRP CZ3 HZ3 sing N N 319 TRP CH2 HH2 sing N N 320 TRP OXT HXT sing N N 321 TYR N CA sing N N 322 TYR N H sing N N 323 TYR N H2 sing N N 324 TYR CA C sing N N 325 TYR CA CB sing N N 326 TYR CA HA sing N N 327 TYR C O doub N N 328 TYR C OXT sing N N 329 TYR CB CG sing N N 330 TYR CB HB2 sing N N 331 TYR CB HB3 sing N N 332 TYR CG CD1 doub Y N 333 TYR CG CD2 sing Y N 334 TYR CD1 CE1 sing Y N 335 TYR CD1 HD1 sing N N 336 TYR CD2 CE2 doub Y N 337 TYR CD2 HD2 sing N N 338 TYR CE1 CZ doub Y N 339 TYR CE1 HE1 sing N N 340 TYR CE2 CZ sing Y N 341 TYR CE2 HE2 sing N N 342 TYR CZ OH sing N N 343 TYR OH HH sing N N 344 TYR OXT HXT sing N N 345 VAL N CA sing N N 346 VAL N H sing N N 347 VAL N H2 sing N N 348 VAL CA C sing N N 349 VAL CA CB sing N N 350 VAL CA HA sing N N 351 VAL C O doub N N 352 VAL C OXT sing N N 353 VAL CB CG1 sing N N 354 VAL CB CG2 sing N N 355 VAL CB HB sing N N 356 VAL CG1 HG11 sing N N 357 VAL CG1 HG12 sing N N 358 VAL CG1 HG13 sing N N 359 VAL CG2 HG21 sing N N 360 VAL CG2 HG22 sing N N 361 VAL CG2 HG23 sing N N 362 VAL OXT HXT sing N N 363 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 CA ? ? CA ? ? 'SUBJECT OF INVESTIGATION' ? 2 EDO ? ? EDO ? ? 'SUBJECT OF INVESTIGATION' ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1PW9 _pdbx_initial_refinement_model.details 'pdbid 1pw9' # _atom_sites.entry_id 6RYJ _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.019677 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019677 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018926 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CA N O S # loop_