HEADER MEMBRANE PROTEIN 21-AUG-19 6SM3 TITLE STRUCTURE OF THE RAGAB PEPTIDE IMPORTER IN THE 'CLOSED-CLOSED' STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIPOPROTEIN RAGB; COMPND 3 CHAIN: A; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: RAGA PROTEIN; COMPND 6 CHAIN: B; COMPND 7 MOL_ID: 3; COMPND 8 MOLECULE: GLY-GLY-ALA-THR-THR-ALA-THR-THR-THR-THR-SER-THR-SER; COMPND 9 CHAIN: C; COMPND 10 OTHER_DETAILS: PUTATIVE PEPTIDE SUBSTRATE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PORPHYROMONAS GINGIVALIS (STRAIN ATCC BAA-308 / SOURCE 3 W83); SOURCE 4 ORGANISM_TAXID: 242619; SOURCE 5 STRAIN: ATCC BAA-308 / W83; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: PORPHYROMONAS GINGIVALIS (STRAIN ATCC BAA-308 / SOURCE 8 W83); SOURCE 9 ORGANISM_TAXID: 242619; SOURCE 10 STRAIN: ATCC BAA-308 / W83; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: PORPHYROMONAS GINGIVALIS W83; SOURCE 13 ORGANISM_TAXID: 242619; SOURCE 14 STRAIN: KRAB KEYWDS BETA-BARREL, OMP, TONB-DEPENDENT, TRANSPORTER, MEMBRANE PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR J.B.R.WHITE,N.A.RANSON,B.VAN DEN BERG REVDAT 2 05-AUG-20 6SM3 1 JRNL LINK REVDAT 1 20-MAY-20 6SM3 0 JRNL AUTH M.MADEJ,J.B.R.WHITE,Z.NOWAKOWSKA,S.RAWSON,C.SCAVENIUS, JRNL AUTH 2 J.J.ENGHILD,G.P.BERETA,K.POTHULA,U.KLEINEKATHOEFER,A.BASLE, JRNL AUTH 3 N.A.RANSON,J.POTEMPA,B.VAN DEN BERG JRNL TITL STRUCTURAL AND FUNCTIONAL INSIGHTS INTO OLIGOPEPTIDE JRNL TITL 2 ACQUISITION BY THE RAGAB TRANSPORTER FROM PORPHYROMONAS JRNL TITL 3 GINGIVALIS. JRNL REF NAT MICROBIOL V. 5 1016 2020 JRNL REFN ESSN 2058-5276 JRNL PMID 32393857 JRNL DOI 10.1038/S41564-020-0716-Y REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : RELION, EPU, GCTF, RELION, RELION, REMARK 3 RELION, RELION REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.300 REMARK 3 NUMBER OF PARTICLES : 86877 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6SM3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-AUG-19. REMARK 100 THE DEPOSITION ID IS D_1292103925. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : RAGAB WITH PUTATIVE PEPTIDE REMARK 245 SUBSTRATE REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 1.75 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : 6 SECOND BLOT TIME, BLOT FORCE REMARK 245 6 REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : PUTATIVE PEPTIDE SUBSTRATE CO REMARK 245 -PURIFIED WITH THE COMPLEX REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 77.88 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 57140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 231.35560 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 231.00900 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN B 713 CG OD1 ND2 REMARK 470 LEU B 716 CG CD1 CD2 REMARK 470 ASP B 839 CG OD1 OD2 REMARK 470 ASN B 841 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 68 -169.19 -79.88 REMARK 500 THR A 174 -61.94 -90.27 REMARK 500 THR A 303 38.49 -95.78 REMARK 500 ASN A 318 77.41 -154.18 REMARK 500 PHE A 324 -169.76 -78.13 REMARK 500 LYS A 348 -19.11 69.95 REMARK 500 ASP A 349 5.82 -151.45 REMARK 500 PHE A 357 42.57 -104.66 REMARK 500 ASN A 420 88.00 -151.73 REMARK 500 MET A 421 0.98 59.43 REMARK 500 LEU A 432 35.12 -98.85 REMARK 500 LEU A 460 77.28 -100.08 REMARK 500 ARG A 489 9.17 57.01 REMARK 500 ALA B 131 -159.36 -78.84 REMARK 500 PRO B 134 43.48 -86.53 REMARK 500 THR B 159 56.31 -96.45 REMARK 500 LYS B 207 58.94 -99.79 REMARK 500 ALA B 217 -40.63 -135.25 REMARK 500 LEU B 256 33.08 -97.37 REMARK 500 LEU B 302 25.44 -141.50 REMARK 500 SER B 342 -159.14 -96.81 REMARK 500 ASP B 400 50.80 -95.49 REMARK 500 ASP B 532 -70.54 -123.71 REMARK 500 GLU B 533 -24.95 -140.75 REMARK 500 LYS B 534 32.62 -143.64 REMARK 500 LEU B 565 77.20 -101.28 REMARK 500 PRO B 580 -176.50 -69.76 REMARK 500 SER B 688 -60.31 -95.03 REMARK 500 ASP B 694 40.77 -108.16 REMARK 500 ASN B 713 -24.11 73.63 REMARK 500 ASN B 714 3.80 -153.91 REMARK 500 VAL B 724 -61.36 -121.42 REMARK 500 ARG B 725 69.26 61.14 REMARK 500 LEU B 789 -93.41 -86.34 REMARK 500 PHE B 790 -30.69 -154.26 REMARK 500 ASN B 800 46.38 38.29 REMARK 500 LEU B 914 46.54 -89.17 REMARK 500 PRO B 928 -174.66 -69.74 REMARK 500 ALA B 944 48.88 -93.60 REMARK 500 ILE B 969 -166.36 -123.36 REMARK 500 LYS B 988 57.92 -98.21 REMARK 500 PHE B 990 -20.51 74.13 REMARK 500 ASP B 991 126.31 -170.33 REMARK 500 ASN B 997 -22.54 71.90 REMARK 500 ASN B1001 95.65 -69.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN B 713 ASN B 714 148.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 5PL A 601 REMARK 610 PLM A 602 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5PL A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PLM A 602 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6SLI RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RAGAB FROM P. GINGIVALIS W83 (KRAB) STRAIN REMARK 900 RELATED ID: 6SLJ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RAGAB STRUCTURE FROM P. GINGIVALIS W83 WT REMARK 900 RELATED ID: 6SLN RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RAGAB FROM P. GINGIVALIS W83 WT PLUS P21 REMARK 900 PEPTIDE REMARK 900 RELATED ID: EMD-10241 RELATED DB: EMDB REMARK 900 STRUCTURE OF THE RAGAB PEPTIDE IMPORTER IN THE 'CLOSED-CLOSED' STATE DBREF 6SM3 A 20 501 UNP F5H948 F5H948_PORGI 20 501 DBREF 6SM3 B 115 1017 UNP Q7MXJ7 Q7MXJ7_PORGI 115 1017 DBREF 6SM3 C 1 13 PDB 6SM3 6SM3 1 13 SEQRES 1 A 482 CYS GLU LEU ASP ARG ASP PRO GLU GLY LYS ASP PHE GLN SEQRES 2 A 482 GLN PRO TYR THR SER PHE VAL GLN THR LYS GLN ASN ARG SEQRES 3 A 482 ASP GLY LEU TYR ALA LEU LEU ARG ASN THR GLU ASN PRO SEQRES 4 A 482 ARG MET HIS PHE TYR GLN GLU LEU GLN SER ASP MET TYR SEQRES 5 A 482 CYS THR THR ILE THR ASP GLY ASN SER LEU ALA PRO PHE SEQRES 6 A 482 VAL ASN TRP ASP LEU GLY ILE LEU ASN ASP HIS GLY ARG SEQRES 7 A 482 ALA ASP GLU ASP GLU VAL SER GLY ILE ALA GLY TYR TYR SEQRES 8 A 482 PHE VAL TYR ASN ARG LEU ASN GLN GLN ALA ASN ALA PHE SEQRES 9 A 482 VAL ASN ASN THR GLU ALA ALA LEU GLN ASN GLN VAL TYR SEQRES 10 A 482 LYS ASN SER THR GLU ILE ALA ASN ALA LYS SER PHE LEU SEQRES 11 A 482 ALA GLU GLY LYS VAL LEU GLN ALA LEU ALA ILE TRP ARG SEQRES 12 A 482 LEU MET ASP ARG PHE SER PHE HIS GLU SER VAL THR GLU SEQRES 13 A 482 VAL ASN SER GLY ALA LYS ASP LEU GLY VAL ILE LEU LEU SEQRES 14 A 482 LYS GLU TYR ASN PRO GLY TYR ILE GLY PRO ARG ALA THR SEQRES 15 A 482 LYS ALA GLN CYS TYR ASP TYR ILE LEU SER ARG LEU SER SEQRES 16 A 482 GLU ALA ILE GLU VAL LEU PRO GLU ASN ARG GLU SER VAL SEQRES 17 A 482 LEU TYR VAL SER ARG ASP TYR ALA TYR ALA LEU ARG ALA SEQRES 18 A 482 ARG ILE TYR LEU ALA LEU GLY GLU TYR GLY LYS ALA ALA SEQRES 19 A 482 ALA ASP ALA LYS MET VAL VAL ASP LYS TYR PRO LEU ILE SEQRES 20 A 482 GLY ALA ALA ASP ALA SER GLU PHE GLU ASN ILE TYR ARG SEQRES 21 A 482 SER ASP ALA ASN ASN PRO GLU ILE ILE PHE ARG GLY PHE SEQRES 22 A 482 ALA SER ALA THR LEU GLY SER PHE THR ALA THR THR LEU SEQRES 23 A 482 ASN GLY ALA ALA PRO ALA GLY LYS ASP ILE LYS TYR ASN SEQRES 24 A 482 PRO SER ALA VAL PRO PHE GLN TRP VAL VAL ASP LEU TYR SEQRES 25 A 482 GLU ASN GLU ASP PHE ARG LYS SER VAL TYR ILE ALA LYS SEQRES 26 A 482 VAL VAL LYS LYS ASP LYS GLY TYR LEU VAL ASN LYS PHE SEQRES 27 A 482 LEU GLU ASP LYS ALA TYR ARG ASP VAL GLN ASP LYS PRO SEQRES 28 A 482 ASN LEU LYS VAL GLY ALA ARG TYR PHE SER VAL ALA GLU SEQRES 29 A 482 VAL TYR LEU ILE LEU VAL GLU SER ALA LEU GLN THR GLY SEQRES 30 A 482 ASP THR PRO THR ALA GLU LYS TYR LEU LYS ALA LEU SER SEQRES 31 A 482 LYS ALA ARG GLY ALA GLU VAL SER VAL VAL ASN MET GLU SEQRES 32 A 482 ALA LEU GLN ALA GLU ARG THR ARG GLU LEU ILE GLY GLU SEQRES 33 A 482 GLY SER ARG LEU ARG ASP MET VAL ARG TRP SER ILE PRO SEQRES 34 A 482 ASN ASN HIS ASP ALA PHE GLU THR GLN PRO GLY LEU GLU SEQRES 35 A 482 GLY PHE ALA ASN THR THR PRO LEU LYS ALA GLN ALA PRO SEQRES 36 A 482 VAL GLY PHE TYR ALA TYR THR TRP GLU PHE PRO GLN ARG SEQRES 37 A 482 ASP ARG GLN THR ASN PRO GLN LEU ILE LYS ASN TRP PRO SEQRES 38 A 482 ILE SEQRES 1 B 903 LEU SER THR VAL SER GLY SER VAL ALA LYS VAL SER SER SEQRES 2 B 903 GLU LYS LEU ALA GLU LYS PRO VAL ALA ASN ILE MET ASP SEQRES 3 B 903 ALA LEU GLN GLY GLN VAL ALA GLY MET GLN VAL MET THR SEQRES 4 B 903 THR SER GLY ASP PRO THR ALA VAL ALA SER VAL GLU ILE SEQRES 5 B 903 HIS GLY THR GLY SER LEU GLY ALA SER SER ALA PRO LEU SEQRES 6 B 903 TYR ILE VAL ASP GLY MET GLN THR SER LEU ASP VAL VAL SEQRES 7 B 903 ALA THR MET ASN PRO ASN ASP PHE GLU SER MET SER VAL SEQRES 8 B 903 LEU LYS ASP ALA SER ALA THR SER ILE TYR GLY ALA ARG SEQRES 9 B 903 ALA ALA ASN GLY VAL VAL PHE ILE GLN THR LYS LYS GLY SEQRES 10 B 903 LYS MET SER GLU ARG GLY ARG ILE THR PHE ASN ALA SER SEQRES 11 B 903 TYR GLY ILE SER GLN ILE LEU ASN THR LYS PRO LEU ASP SEQRES 12 B 903 ASN MET MET THR GLY ASP GLU LEU LEU ASP PHE GLN VAL SEQRES 13 B 903 LYS ALA GLY PHE TRP GLY ASN ASN GLN THR VAL GLN LYS SEQRES 14 B 903 VAL LYS ASP MET ILE LEU ALA GLY ALA GLU ASP LEU TYR SEQRES 15 B 903 GLY ASN TYR ASP SER LEU LYS ASP GLU TYR GLY LYS THR SEQRES 16 B 903 LEU PHE PRO VAL ASP PHE ASN HIS ASP ALA ASP TRP LEU SEQRES 17 B 903 LYS ALA LEU PHE LYS THR ALA PRO THR SER GLN GLY ASP SEQRES 18 B 903 ILE SER PHE SER GLY GLY SER GLN GLY THR SER TYR TYR SEQRES 19 B 903 ALA SER ILE GLY TYR PHE ASP GLN GLU GLY MET ALA ARG SEQRES 20 B 903 GLU PRO ALA ASN PHE LYS ARG TYR SER GLY ARG LEU ASN SEQRES 21 B 903 PHE GLU SER ARG ILE ASN GLU TRP LEU LYS VAL GLY ALA SEQRES 22 B 903 ASN LEU SER GLY ALA ILE ALA ASN ARG ARG SER ALA ASP SEQRES 23 B 903 TYR PHE GLY LYS TYR TYR MET GLY SER GLY THR PHE GLY SEQRES 24 B 903 VAL LEU THR MET PRO ARG TYR TYR ASN PRO PHE ASP VAL SEQRES 25 B 903 ASN GLY ASP LEU ALA ASP VAL TYR TYR MET TYR GLY ALA SEQRES 26 B 903 THR ARG PRO SER MET THR GLU PRO TYR PHE ALA LYS MET SEQRES 27 B 903 ARG PRO PHE SER SER GLU SER HIS GLN ALA ASN VAL ASN SEQRES 28 B 903 GLY PHE ALA GLN ILE THR PRO ILE LYS GLY LEU THR LEU SEQRES 29 B 903 LYS ALA GLN ALA GLY VAL ASP ILE THR ASN THR ARG THR SEQRES 30 B 903 SER SER LYS ARG MET PRO ASN ASN PRO TYR ASP SER THR SEQRES 31 B 903 PRO LEU GLY GLU ARG ARG GLU ARG ALA TYR ARG ASP VAL SEQRES 32 B 903 SER LYS SER PHE THR ASN THR ALA GLU TYR LYS PHE SER SEQRES 33 B 903 ILE ASP GLU LYS HIS ASP LEU THR ALA LEU MET GLY HIS SEQRES 34 B 903 GLU TYR ILE GLU TYR GLU GLY ASP VAL ILE GLY ALA SER SEQRES 35 B 903 SER LYS GLY PHE GLU SER ASP LYS LEU MET LEU LEU SER SEQRES 36 B 903 GLN GLY LYS THR GLY ASN SER LEU SER LEU PRO GLU HIS SEQRES 37 B 903 ARG VAL ALA GLU TYR ALA TYR LEU SER PHE PHE SER ARG SEQRES 38 B 903 PHE ASN TYR GLY PHE ASP LYS TRP MET TYR ILE ASP PHE SEQRES 39 B 903 SER VAL ARG ASN ASP GLN SER SER ARG PHE GLY SER ASN SEQRES 40 B 903 ASN ARG SER ALA TRP PHE TYR SER VAL GLY GLY MET PHE SEQRES 41 B 903 ASP ILE TYR ASN LYS PHE ILE GLN GLU SER ASN TRP LEU SEQRES 42 B 903 SER ASP LEU ARG LEU LYS MET SER TYR GLY THR THR GLY SEQRES 43 B 903 ASN SER GLU ILE GLY ASN TYR ASN HIS GLN ALA LEU VAL SEQRES 44 B 903 THR VAL ASN ASN TYR THR GLU ASP ALA MET GLY LEU SER SEQRES 45 B 903 ILE SER THR ALA GLY ASN PRO ASP LEU SER TRP GLU LYS SEQRES 46 B 903 GLN SER GLN PHE ASN PHE GLY LEU ALA ALA GLY ALA PHE SEQRES 47 B 903 ASN ASN ARG LEU SER ALA GLU VAL ASP PHE TYR VAL ARG SEQRES 48 B 903 THR THR ASN ASP MET LEU ILE ASP VAL PRO MET PRO TYR SEQRES 49 B 903 ILE SER GLY PHE PHE SER GLN TYR GLN ASN VAL GLY SER SEQRES 50 B 903 MET LYS ASN THR GLY VAL ASP LEU SER LEU LYS GLY THR SEQRES 51 B 903 ILE TYR GLN ASN LYS ASP TRP ASN VAL TYR ALA SER ALA SEQRES 52 B 903 ASN PHE ASN TYR ASN ARG GLN GLU ILE THR LYS LEU PHE SEQRES 53 B 903 PHE GLY LEU ASN LYS TYR MET LEU PRO ASN THR GLY THR SEQRES 54 B 903 ILE TRP GLU ILE GLY TYR PRO ASN SER PHE TYR MET ALA SEQRES 55 B 903 GLU TYR ALA GLY ILE ASP LYS LYS THR GLY LYS GLN LEU SEQRES 56 B 903 TRP TYR VAL PRO GLY GLN VAL ASP ALA ASP GLY ASN LYS SEQRES 57 B 903 VAL THR THR SER GLN TYR SER ALA ASP LEU GLU THR ARG SEQRES 58 B 903 ILE ASP LYS SER VAL THR PRO PRO ILE THR GLY GLY PHE SEQRES 59 B 903 SER LEU GLY ALA SER TRP LYS GLY LEU SER LEU ASP ALA SEQRES 60 B 903 ASP PHE ALA TYR ILE VAL GLY LYS TRP MET ILE ASN ASN SEQRES 61 B 903 ASP ARG TYR PHE THR GLU ASN GLY GLY GLY LEU MET GLN SEQRES 62 B 903 LEU ASN LYS ASP LYS MET LEU LEU ASN ALA TRP THR GLU SEQRES 63 B 903 ASP ASN LYS GLU THR ASP VAL PRO LYS LEU GLY GLN SER SEQRES 64 B 903 PRO GLN PHE ASP THR HIS LEU LEU GLU ASN ALA SER PHE SEQRES 65 B 903 LEU ARG LEU LYS ASN LEU LYS LEU THR TYR VAL LEU PRO SEQRES 66 B 903 ASN SER LEU PHE ALA GLY GLN ASN VAL ILE GLY GLY ALA SEQRES 67 B 903 ARG VAL TYR LEU MET ALA ARG ASN LEU LEU THR VAL THR SEQRES 68 B 903 LYS TYR LYS GLY PHE ASP PRO GLU ALA GLY GLY ASN VAL SEQRES 69 B 903 GLY LYS ASN GLN TYR PRO ASN SER LYS GLN TYR VAL ALA SEQRES 70 B 903 GLY ILE GLN LEU SER PHE SEQRES 1 C 13 GLY GLY ALA THR THR ALA THR THR THR THR SER THR SER HET 5PL A 601 26 HET PLM A 602 8 HETNAM 5PL (1R,4S,6R)-6-({[2-(ACETYLAMINO)-2-DEOXY-ALPHA-D- HETNAM 2 5PL GLUCOPYRANOSYL]OXY}METHYL)-4-HYDROXY-1-{[(15- HETNAM 3 5PL METHYLHEXADECANOYL)OXY]METHYL}-4-OXIDO-7-OXO-3,5- HETNAM 4 5PL DIOXA-8-AZA-4-PHOSPHAHEPTACOS-1-YL 15- HETNAM 5 5PL METHYLHEXADECANOATE HETNAM PLM PALMITIC ACID FORMUL 4 5PL C67 H129 N2 O15 P FORMUL 5 PLM C16 H32 O2 HELIX 1 AA1 SER A 37 ASN A 54 1 18 HELIX 2 AA2 PHE A 62 GLN A 67 1 6 HELIX 3 AA3 LEU A 81 ASN A 86 1 6 HELIX 4 AA4 GLY A 105 GLN A 134 1 30 HELIX 5 AA5 ASN A 138 SER A 168 1 31 HELIX 6 AA6 THR A 201 GLU A 218 1 18 HELIX 7 AA7 SER A 231 GLY A 247 1 17 HELIX 8 AA8 GLU A 248 LYS A 257 1 10 HELIX 9 AA9 ASP A 270 ARG A 279 1 10 HELIX 10 AB1 PHE A 324 TYR A 331 1 8 HELIX 11 AB2 ASP A 335 SER A 339 5 5 HELIX 12 AB3 SER A 380 THR A 395 1 16 HELIX 13 AB4 THR A 398 ARG A 412 1 15 HELIX 14 AB5 GLU A 422 LEU A 432 1 11 HELIX 15 AB6 ARG A 438 TRP A 445 1 8 HELIX 16 AB7 PHE A 477 THR A 481 5 5 HELIX 17 AB8 ASN B 137 GLN B 143 5 7 HELIX 18 AB9 SER B 188 ALA B 193 1 6 HELIX 19 AC1 THR B 194 MET B 195 5 2 HELIX 20 AC2 ASN B 196 ASN B 198 5 3 HELIX 21 AC3 ARG B 218 ASN B 221 5 4 HELIX 22 AC4 THR B 253 ASN B 258 5 6 HELIX 23 AC5 THR B 261 ALA B 272 1 12 HELIX 24 AC6 THR B 280 ILE B 288 1 9 HELIX 25 AC7 LEU B 295 TYR B 299 5 5 HELIX 26 AC8 SER B 409 MET B 417 1 9 HELIX 27 AC9 THR B 445 MET B 452 1 8 HELIX 28 AD1 LEU B 567 GLY B 571 5 5 HELIX 29 AD2 PRO B 737 GLY B 741 5 5 HELIX 30 AD3 ASP B 895 PHE B 898 5 4 HELIX 31 AD4 PRO B 959 PHE B 963 5 5 SHEET 1 AA1 3 ASP A 30 PHE A 31 0 SHEET 2 AA1 3 LEU B 672 VAL B 675 -1 O VAL B 673 N ASP A 30 SHEET 3 AA1 3 LEU B 685 ILE B 687 -1 O SER B 686 N THR B 674 SHEET 1 AA2 2 TYR A 71 THR A 73 0 SHEET 2 AA2 2 ALA A 321 PRO A 323 -1 O VAL A 322 N CYS A 72 SHEET 1 AA3 2 ARG A 97 ASP A 99 0 SHEET 2 AA3 2 GLU A 102 SER A 104 -1 O GLU A 102 N ASP A 99 SHEET 1 AA4 2 PHE A 289 ARG A 290 0 SHEET 2 AA4 2 ARG A 377 PHE A 379 -1 O TYR A 378 N PHE A 289 SHEET 1 AA5 2 PHE A 300 THR A 301 0 SHEET 2 AA5 2 LYS A 373 VAL A 374 -1 O VAL A 374 N PHE A 300 SHEET 1 AA6 2 ALA A 308 ALA A 311 0 SHEET 2 AA6 2 ASP A 314 TYR A 317 -1 O ASP A 314 N ALA A 311 SHEET 1 AA7 2 ILE A 342 VAL A 346 0 SHEET 2 AA7 2 GLY A 351 VAL A 354 -1 O GLY A 351 N VAL A 346 SHEET 1 AA8 5 VAL B 122 VAL B 125 0 SHEET 2 AA8 5 PHE B 200 LEU B 206 -1 O VAL B 205 N ALA B 123 SHEET 3 AA8 5 VAL B 223 THR B 228 -1 O PHE B 225 N SER B 204 SHEET 4 AA8 5 LEU B 179 VAL B 182 1 N ILE B 181 O VAL B 224 SHEET 5 AA8 5 MET B 185 GLN B 186 -1 O MET B 185 N VAL B 182 SHEET 1 AA9 2 MET B 149 MET B 152 0 SHEET 2 AA9 2 SER B 163 ILE B 166 -1 O GLU B 165 N GLN B 150 SHEET 1 AB119 THR B 726 ASN B 728 0 SHEET 2 AB119 GLU B 698 ALA B 711 -1 N LYS B 699 O ASN B 728 SHEET 3 AB119 LEU B 647 ASN B 661 -1 N THR B 659 O GLN B 700 SHEET 4 AB119 SER B 624 ASP B 635 -1 N VAL B 630 O TYR B 656 SHEET 5 AB119 MET B 604 SER B 615 -1 N ARG B 611 O PHE B 627 SHEET 6 AB119 GLU B 581 GLY B 599 -1 N TYR B 598 O ILE B 606 SHEET 7 AB119 LEU B 537 PHE B 560 -1 N GLU B 544 O SER B 591 SHEET 8 AB119 GLY B 507 PHE B 529 -1 N ALA B 513 O ILE B 553 SHEET 9 AB119 THR B 477 ARG B 495 -1 N THR B 489 O TYR B 514 SHEET 10 AB119 PHE B 455 ILE B 470 -1 N ALA B 462 O ILE B 486 SHEET 11 AB119 LEU B 383 ARG B 396 -1 N LYS B 384 O GLN B 469 SHEET 12 AB119 PHE B 366 ARG B 378 -1 N SER B 377 O VAL B 385 SHEET 13 AB119 SER B 346 GLN B 356 -1 N GLN B 356 O PHE B 366 SHEET 14 AB119 ALA B 329 GLY B 341 -1 N GLY B 340 O TYR B 347 SHEET 15 AB119 ARG B 238 ILE B 250 -1 N ARG B 238 O SER B 339 SHEET 16 AB119 SER B1006 PHE B1017 -1 O ALA B1011 N TYR B 245 SHEET 17 AB119 ALA B 972 ARG B 979 -1 N MET B 977 O VAL B1010 SHEET 18 AB119 PHE B 946 VAL B 957 -1 N TYR B 956 O VAL B 974 SHEET 19 AB119 THR B 983 THR B 985 -1 O VAL B 984 N LEU B 947 SHEET 1 AB2 9 THR B 726 ASN B 728 0 SHEET 2 AB2 9 GLU B 698 ALA B 711 -1 N LYS B 699 O ASN B 728 SHEET 3 AB2 9 LEU B 716 TYR B 723 -1 O VAL B 720 N LEU B 707 SHEET 4 AB2 9 GLY B 756 THR B 764 -1 O LYS B 762 N SER B 717 SHEET 5 AB2 9 TYR B 774 ASN B 782 -1 O TYR B 781 N VAL B 757 SHEET 6 AB2 9 ILE B 864 SER B 873 -1 O GLY B 871 N TYR B 774 SHEET 7 AB2 9 LEU B 877 VAL B 887 -1 O LEU B 879 N ALA B 872 SHEET 8 AB2 9 PHE B 946 VAL B 957 -1 O LYS B 953 N ASP B 880 SHEET 9 AB2 9 THR B 983 THR B 985 -1 O VAL B 984 N LEU B 947 SHEET 1 AB3 2 VAL B 433 TYR B 434 0 SHEET 2 AB3 2 SER B 443 MET B 444 -1 O SER B 443 N TYR B 434 SHEET 1 AB4 2 LEU B 731 PRO B 735 0 SHEET 2 AB4 2 SER B 744 ASN B 748 -1 O GLN B 747 N ILE B 732 SHEET 1 AB5 2 SER B 751 LYS B 753 0 SHEET 2 AB5 2 GLU B 785 LYS B 788 -1 O GLU B 785 N LYS B 753 SHEET 1 AB6 4 LYS B 795 MET B 797 0 SHEET 2 AB6 4 THR B 803 GLU B 806 -1 O TRP B 805 N TYR B 796 SHEET 3 AB6 4 SER B 812 ALA B 816 -1 O SER B 812 N ILE B 804 SHEET 4 AB6 4 GLU B 853 ILE B 856 -1 O THR B 854 N MET B 815 SHEET 1 AB7 3 TYR B 818 ILE B 821 0 SHEET 2 AB7 3 GLN B 828 VAL B 836 -1 O LEU B 829 N ALA B 819 SHEET 3 AB7 3 LYS B 842 THR B 845 -1 O VAL B 843 N VAL B 832 SHEET 1 AB8 3 LEU B 941 ASN B 943 0 SHEET 2 AB8 3 TRP B 890 ASN B 893 -1 N MET B 891 O GLU B 942 SHEET 3 AB8 3 VAL B 998 GLY B 999 1 O GLY B 999 N ILE B 892 LINK SG CYS A 20 CAW 5PL A 601 1555 1555 1.77 LINK N CYS A 20 C1 PLM A 602 1555 1555 1.43 LINK N CYS A 20 O2 PLM A 602 1555 1555 1.22 SITE 1 AC1 4 CYS A 20 ASN B 523 HIS B 543 TYR B 545 SITE 1 AC2 1 CYS A 20 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000