HEADER HYDROLASE 11-SEP-19 6UAY TITLE CRYSTAL STRUCTURE OF A GH128 (SUBGROUP III) CURDLAN-SPECIFIC EXO-BETA- TITLE 2 1,3-GLUCANASE FROM BLASTOMYCES GILCHRISTII (BGGH128_III) COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOSIDE HYDROLASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BLASTOMYCES GILCHRISTII; SOURCE 3 ORGANISM_TAXID: 1681229; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLYCOSYL HYDROLASE, CARBOHYDRATE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.A.C.R.COSTA,C.R.SANTOS,M.N.DOMINGUES,E.A.LIMA,F.MANDELLI, AUTHOR 2 M.T.MURAKAMI REVDAT 4 11-OCT-23 6UAY 1 REMARK REVDAT 3 05-AUG-20 6UAY 1 JRNL REVDAT 2 10-JUN-20 6UAY 1 JRNL REVDAT 1 20-MAY-20 6UAY 0 JRNL AUTH C.R.SANTOS,P.A.C.R.COSTA,P.S.VIEIRA,S.E.T.GONZALEZ, JRNL AUTH 2 T.L.R.CORREA,E.A.LIMA,F.MANDELLI,R.A.S.PIROLLA, JRNL AUTH 3 M.N.DOMINGUES,L.CABRAL,M.P.MARTINS,R.L.CORDEIRO,A.T.JUNIOR, JRNL AUTH 4 B.P.SOUZA,E.T.PRATES,F.C.GOZZO,G.F.PERSINOTI,M.S.SKAF, JRNL AUTH 5 M.T.MURAKAMI JRNL TITL STRUCTURAL INSIGHTS INTO BETA-1,3-GLUCAN CLEAVAGE BY A JRNL TITL 2 GLYCOSIDE HYDROLASE FAMILY. JRNL REF NAT.CHEM.BIOL. V. 16 920 2020 JRNL REFN ESSN 1552-4469 JRNL PMID 32451508 JRNL DOI 10.1038/S41589-020-0554-5 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.43 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 33080 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1742 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2356 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.58 REMARK 3 BIN R VALUE (WORKING SET) : 0.2040 REMARK 3 BIN FREE R VALUE SET COUNT : 124 REMARK 3 BIN FREE R VALUE : 0.2630 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3667 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 326 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.07000 REMARK 3 B22 (A**2) : 0.29000 REMARK 3 B33 (A**2) : -0.31000 REMARK 3 B12 (A**2) : -0.31000 REMARK 3 B13 (A**2) : -0.33000 REMARK 3 B23 (A**2) : 0.37000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.154 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.136 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.091 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.823 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3839 ; 0.015 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3357 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5236 ; 1.893 ; 1.634 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7803 ; 1.521 ; 1.572 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 496 ; 7.395 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 190 ;32.668 ;23.158 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 549 ;13.084 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;21.338 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 462 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4487 ; 0.014 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 858 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 19 A 262 REMARK 3 ORIGIN FOR THE GROUP (A): 15.4538 34.5823 -13.5025 REMARK 3 T TENSOR REMARK 3 T11: 0.0337 T22: 0.0048 REMARK 3 T33: 0.0173 T12: 0.0065 REMARK 3 T13: 0.0063 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 0.1263 L22: 0.6581 REMARK 3 L33: 0.3199 L12: -0.0655 REMARK 3 L13: 0.0082 L23: 0.0403 REMARK 3 S TENSOR REMARK 3 S11: 0.0285 S12: -0.0038 S13: 0.0075 REMARK 3 S21: -0.0550 S22: -0.0210 S23: -0.0441 REMARK 3 S31: -0.0284 S32: -0.0137 S33: -0.0075 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 19 B 262 REMARK 3 ORIGIN FOR THE GROUP (A): 30.7935 53.5657 15.6839 REMARK 3 T TENSOR REMARK 3 T11: 0.0230 T22: 0.0128 REMARK 3 T33: 0.0083 T12: -0.0064 REMARK 3 T13: -0.0051 T23: 0.0039 REMARK 3 L TENSOR REMARK 3 L11: 0.1938 L22: 0.4304 REMARK 3 L33: 0.3827 L12: 0.1224 REMARK 3 L13: 0.0133 L23: -0.0380 REMARK 3 S TENSOR REMARK 3 S11: 0.0249 S12: -0.0166 S13: -0.0234 REMARK 3 S21: 0.0174 S22: -0.0029 S23: -0.0506 REMARK 3 S31: 0.0318 S32: -0.0333 S33: -0.0220 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6UAY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-SEP-19. REMARK 100 THE DEPOSITION ID IS D_1000242447. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-AUG-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : W01B-MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.458810 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34823 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 47.430 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 4.480 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.2500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.290 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6UAQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 29.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05 M POTASSIUM DI-HYDROGEN PHOSPHATE REMARK 280 20% POLYETHYLENE GLYCOL 8,000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 2 REMARK 465 GLY A 3 REMARK 465 SER A 4 REMARK 465 SER A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 HIS A 11 REMARK 465 SER A 12 REMARK 465 SER A 13 REMARK 465 GLY A 14 REMARK 465 LEU A 15 REMARK 465 VAL A 16 REMARK 465 PRO A 17 REMARK 465 ALA A 18 REMARK 465 ILE A 28 REMARK 465 ALA A 29 REMARK 465 ALA A 30 REMARK 465 ASN A 31 REMARK 465 PRO A 32 REMARK 465 GLY A 33 REMARK 465 MET B 2 REMARK 465 GLY B 3 REMARK 465 SER B 4 REMARK 465 SER B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 HIS B 9 REMARK 465 HIS B 10 REMARK 465 HIS B 11 REMARK 465 SER B 12 REMARK 465 SER B 13 REMARK 465 GLY B 14 REMARK 465 LEU B 15 REMARK 465 VAL B 16 REMARK 465 PRO B 17 REMARK 465 ALA B 18 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 73 O HOH B 301 2.11 REMARK 500 OH TYR B 68 O HOH B 302 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 162 C CYS A 162 O 0.123 REMARK 500 GLU B 216 CD GLU B 216 OE1 0.067 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 187 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 51 127.28 -31.80 REMARK 500 ASN A 60 15.20 -143.22 REMARK 500 ALA A 104 -158.22 -89.79 REMARK 500 GLN A 113 -139.30 -115.48 REMARK 500 ASN A 181 43.48 -100.39 REMARK 500 TYR B 26 47.86 -103.03 REMARK 500 ILE B 28 121.68 -39.53 REMARK 500 ASN B 31 88.80 -165.02 REMARK 500 ALA B 104 -159.19 -92.22 REMARK 500 GLN B 113 -137.11 -117.17 REMARK 500 ASN B 115 65.84 62.34 REMARK 500 REMARK 500 REMARK: NULL DBREF1 6UAY A 23 262 UNP A0A179UGT5_BLAGS DBREF2 6UAY A A0A179UGT5 23 262 DBREF1 6UAY B 23 262 UNP A0A179UGT5_BLAGS DBREF2 6UAY B A0A179UGT5 23 262 SEQADV 6UAY MET A 2 UNP A0A179UGT INITIATING METHIONINE SEQADV 6UAY GLY A 3 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY SER A 4 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY SER A 5 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY HIS A 6 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY HIS A 7 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY HIS A 8 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY HIS A 9 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY HIS A 10 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY HIS A 11 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY SER A 12 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY SER A 13 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY GLY A 14 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY LEU A 15 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY VAL A 16 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY PRO A 17 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY ALA A 18 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY GLY A 19 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY SER A 20 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY HIS A 21 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY MET A 22 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY MET B 2 UNP A0A179UGT INITIATING METHIONINE SEQADV 6UAY GLY B 3 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY SER B 4 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY SER B 5 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY HIS B 6 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY HIS B 7 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY HIS B 8 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY HIS B 9 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY HIS B 10 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY HIS B 11 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY SER B 12 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY SER B 13 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY GLY B 14 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY LEU B 15 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY VAL B 16 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY PRO B 17 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY ALA B 18 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY GLY B 19 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY SER B 20 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY HIS B 21 UNP A0A179UGT EXPRESSION TAG SEQADV 6UAY MET B 22 UNP A0A179UGT EXPRESSION TAG SEQRES 1 A 261 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 261 LEU VAL PRO ALA GLY SER HIS MET ALA ASP TYR TYR THR SEQRES 3 A 261 ILE ALA ALA ASN PRO GLY SER GLY LYS ARG GLY LEU ALA SEQRES 4 A 261 TYR ASN ASN ILE ASN LEU LEU THR ALA PHE GLU GLY GLY SEQRES 5 A 261 PRO PHE SER TRP SER TYR ASN TRP GLU PRO ARG PRO GLY SEQRES 6 A 261 GLY TYR THR ALA GLY ILE GLU TYR VAL PRO MET LEU TRP SEQRES 7 A 261 GLY PRO ARG GLY TYR GLY SER TRP ASN ALA ASP ALA GLU SEQRES 8 A 261 ALA GLY ILE ALA ALA GLY SER LYS ASN LEU LEU ALA PHE SEQRES 9 A 261 ASN GLU PRO ASP ILE ALA SER GLN ALA ASN MET SER PRO SEQRES 10 A 261 GLU ALA ALA ALA ALA ALA TYR GLN LYS TYR MET ASN PRO SEQRES 11 A 261 TYR ALA ALA ARG ALA ARG LEU GLY SER PRO ALA VAL SER SEQRES 12 A 261 ASN GLY ALA PRO PRO LYS GLY LEU GLY TRP MET GLN GLY SEQRES 13 A 261 PHE LEU ASP VAL CYS ALA GLY ASN CYS LYS ILE ASP PHE SEQRES 14 A 261 LEU ALA VAL HIS TRP HIS GLY PRO SER GLY ASN VAL ASP SEQRES 15 A 261 ASP PHE LYS ARG TYR VAL SER GLU ALA ILE ALA LEU GLY SEQRES 16 A 261 GLN LYS TYR GLY ILE GLY THR VAL TRP VAL THR GLU PHE SEQRES 17 A 261 GLU GLY GLN GLY ASP GLU GLU ALA GLN VAL ASN PHE LEU SEQRES 18 A 261 LYS GLU VAL LEU PRO TRP LEU ASP SER ASN ALA GLY VAL SEQRES 19 A 261 GLU ARG TYR ALA SER PHE PHE VAL ASP ASN LEU VAL LYS SEQRES 20 A 261 GLY GLY ALA LEU THR SER VAL GLY LYS ALA TYR LYS THR SEQRES 21 A 261 ILE SEQRES 1 B 261 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 261 LEU VAL PRO ALA GLY SER HIS MET ALA ASP TYR TYR THR SEQRES 3 B 261 ILE ALA ALA ASN PRO GLY SER GLY LYS ARG GLY LEU ALA SEQRES 4 B 261 TYR ASN ASN ILE ASN LEU LEU THR ALA PHE GLU GLY GLY SEQRES 5 B 261 PRO PHE SER TRP SER TYR ASN TRP GLU PRO ARG PRO GLY SEQRES 6 B 261 GLY TYR THR ALA GLY ILE GLU TYR VAL PRO MET LEU TRP SEQRES 7 B 261 GLY PRO ARG GLY TYR GLY SER TRP ASN ALA ASP ALA GLU SEQRES 8 B 261 ALA GLY ILE ALA ALA GLY SER LYS ASN LEU LEU ALA PHE SEQRES 9 B 261 ASN GLU PRO ASP ILE ALA SER GLN ALA ASN MET SER PRO SEQRES 10 B 261 GLU ALA ALA ALA ALA ALA TYR GLN LYS TYR MET ASN PRO SEQRES 11 B 261 TYR ALA ALA ARG ALA ARG LEU GLY SER PRO ALA VAL SER SEQRES 12 B 261 ASN GLY ALA PRO PRO LYS GLY LEU GLY TRP MET GLN GLY SEQRES 13 B 261 PHE LEU ASP VAL CYS ALA GLY ASN CYS LYS ILE ASP PHE SEQRES 14 B 261 LEU ALA VAL HIS TRP HIS GLY PRO SER GLY ASN VAL ASP SEQRES 15 B 261 ASP PHE LYS ARG TYR VAL SER GLU ALA ILE ALA LEU GLY SEQRES 16 B 261 GLN LYS TYR GLY ILE GLY THR VAL TRP VAL THR GLU PHE SEQRES 17 B 261 GLU GLY GLN GLY ASP GLU GLU ALA GLN VAL ASN PHE LEU SEQRES 18 B 261 LYS GLU VAL LEU PRO TRP LEU ASP SER ASN ALA GLY VAL SEQRES 19 B 261 GLU ARG TYR ALA SER PHE PHE VAL ASP ASN LEU VAL LYS SEQRES 20 B 261 GLY GLY ALA LEU THR SER VAL GLY LYS ALA TYR LYS THR SEQRES 21 B 261 ILE FORMUL 3 HOH *326(H2 O) HELIX 1 AA1 MET A 22 TYR A 26 5 5 HELIX 2 AA2 ASN A 43 GLU A 51 5 9 HELIX 3 AA3 GLY A 80 TYR A 84 5 5 HELIX 4 AA4 SER A 86 ALA A 97 1 12 HELIX 5 AA5 SER A 117 MET A 129 1 13 HELIX 6 AA6 ASN A 130 ALA A 133 5 4 HELIX 7 AA7 LYS A 150 ALA A 163 1 14 HELIX 8 AA8 ASN A 181 TYR A 199 1 19 HELIX 9 AA9 ASP A 214 SER A 231 1 18 HELIX 10 AB1 PHE A 242 LEU A 246 1 5 HELIX 11 AB2 THR A 253 ILE A 262 1 10 HELIX 12 AB3 MET B 22 TYR B 26 5 5 HELIX 13 AB4 ASN B 43 GLU B 51 5 9 HELIX 14 AB5 GLY B 80 GLY B 85 5 6 HELIX 15 AB6 SER B 86 ALA B 97 1 12 HELIX 16 AB7 SER B 117 MET B 129 1 13 HELIX 17 AB8 ASN B 130 ALA B 133 5 4 HELIX 18 AB9 LYS B 150 ALA B 163 1 14 HELIX 19 AC1 ASN B 181 TYR B 199 1 19 HELIX 20 AC2 ASP B 214 ASN B 232 1 19 HELIX 21 AC3 PHE B 242 ASN B 245 5 4 HELIX 22 AC4 THR B 253 ILE B 262 1 10 SHEET 1 AA1 3 ARG A 37 ALA A 40 0 SHEET 2 AA1 3 PHE A 55 TYR A 59 1 O SER A 56 N ARG A 37 SHEET 3 AA1 3 GLU A 73 TYR A 74 1 O GLU A 73 N SER A 58 SHEET 1 AA2 5 ASN A 101 LEU A 103 0 SHEET 2 AA2 5 ARG A 137 VAL A 143 1 O GLY A 139 N LEU A 102 SHEET 3 AA2 5 PHE A 170 PRO A 178 1 O PHE A 170 N SER A 140 SHEET 4 AA2 5 VAL A 204 GLN A 212 1 O TRP A 205 N LEU A 171 SHEET 5 AA2 5 VAL A 235 SER A 240 1 O ALA A 239 N VAL A 206 SHEET 1 AA3 2 VAL A 247 LYS A 248 0 SHEET 2 AA3 2 ALA A 251 LEU A 252 -1 O ALA A 251 N LYS A 248 SHEET 1 AA4 8 GLU B 73 TYR B 74 0 SHEET 2 AA4 8 PHE B 55 TYR B 59 1 N SER B 56 O GLU B 73 SHEET 3 AA4 8 ARG B 37 ALA B 40 1 N ARG B 37 O SER B 56 SHEET 4 AA4 8 VAL B 235 SER B 240 1 O TYR B 238 N GLY B 38 SHEET 5 AA4 8 VAL B 204 GLN B 212 1 N VAL B 206 O ALA B 239 SHEET 6 AA4 8 PHE B 170 PRO B 178 1 N GLY B 177 O GLN B 212 SHEET 7 AA4 8 ARG B 137 VAL B 143 1 N SER B 140 O PHE B 170 SHEET 8 AA4 8 ASN B 101 LEU B 103 1 N LEU B 102 O GLY B 139 SHEET 1 AA5 2 VAL B 247 LYS B 248 0 SHEET 2 AA5 2 ALA B 251 LEU B 252 -1 O ALA B 251 N LYS B 248 SSBOND 1 CYS A 162 CYS A 166 1555 1555 2.10 SSBOND 2 CYS B 162 CYS B 166 1555 1555 2.13 CISPEP 1 PRO A 148 PRO A 149 0 12.53 CISPEP 2 PHE A 241 PHE A 242 0 -15.89 CISPEP 3 PRO B 148 PRO B 149 0 15.32 CISPEP 4 PHE B 241 PHE B 242 0 -8.17 CRYST1 36.470 48.720 57.110 102.61 89.78 93.89 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027420 0.001865 0.000311 0.00000 SCALE2 0.000000 0.020573 0.004607 0.00000 SCALE3 0.000000 0.000000 0.017944 0.00000