data_6UEY # _entry.id 6UEY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6UEY pdb_00006uey 10.2210/pdb6uey/pdb WWPDB D_1000244497 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-12-18 2 'Structure model' 1 1 2020-01-22 3 'Structure model' 1 2 2020-02-19 4 'Structure model' 1 3 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' citation_author 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' database_2 8 4 'Structure model' struct_conn 9 4 'Structure model' struct_conn_type 10 4 'Structure model' struct_ncs_dom_lim # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.title' 2 2 'Structure model' '_citation_author.identifier_ORCID' 3 3 'Structure model' '_citation.journal_volume' 4 3 'Structure model' '_citation.page_first' 5 3 'Structure model' '_citation.page_last' 6 3 'Structure model' '_citation.year' 7 3 'Structure model' '_citation_author.identifier_ORCID' 8 4 'Structure model' '_database_2.pdbx_DOI' 9 4 'Structure model' '_database_2.pdbx_database_accession' 10 4 'Structure model' '_struct_conn.conn_type_id' 11 4 'Structure model' '_struct_conn.id' 12 4 'Structure model' '_struct_conn.pdbx_dist_value' 13 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 14 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 15 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 16 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 17 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 18 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 19 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 21 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 22 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 23 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 24 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 25 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 28 4 'Structure model' '_struct_conn_type.id' 29 4 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 30 4 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 31 4 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 32 4 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 33 4 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 34 4 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 35 4 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 36 4 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6UEY _pdbx_database_status.recvd_initial_deposition_date 2019-09-23 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Teplova, M.' 1 ? 'Falschlunger, C.' 2 ? 'Krasheninina, O.' 3 ? 'Patel, D.J.' 4 ? 'Micura, R.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country GE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Angew.Chem.Int.Ed.Engl. _citation.journal_id_ASTM ACIEAY _citation.journal_id_CSD 0179 _citation.journal_id_ISSN 1521-3773 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 59 _citation.language ? _citation.page_first 2837 _citation.page_last 2843 _citation.title 'Crucial Roles of Two Hydrated Mg2+Ions in Reaction Catalysis of the Pistol Ribozyme.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/anie.201912522 _citation.pdbx_database_id_PubMed 31804735 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Teplova, M.' 1 ? primary 'Falschlunger, C.' 2 ? primary 'Krasheninina, O.' 3 ? primary 'Egger, M.' 4 ? primary 'Ren, A.' 5 ? primary 'Patel, D.J.' 6 ? primary 'Micura, R.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA (50-MER)' 16225.694 2 ? ? ? ? 2 polymer syn ;RNA (5'-R(*UP*CP*UP*GP*CP*UP*CP*UP*CP*(GVA)*UP*CP*CP*AP*A)-3') ; 4746.709 2 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 9 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no ACUCGUUUGAGCGAGUAUAAACAGUUGGUUAGGCUCAAAGCGGAGAGCAG ACUCGUUUGAGCGAGUAUAAACAGUUGGUUAGGCUCAAAGCGGAGAGCAG A,C ? 2 polyribonucleotide no yes 'UCUGCUCUC(Q61)UCCAA' UCUGCUCUCXUCCAA B,D ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name 'MAGNESIUM ION' _pdbx_entity_nonpoly.comp_id MG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 A n 1 2 C n 1 3 U n 1 4 C n 1 5 G n 1 6 U n 1 7 U n 1 8 U n 1 9 G n 1 10 A n 1 11 G n 1 12 C n 1 13 G n 1 14 A n 1 15 G n 1 16 U n 1 17 A n 1 18 U n 1 19 A n 1 20 A n 1 21 A n 1 22 C n 1 23 A n 1 24 G n 1 25 U n 1 26 U n 1 27 G n 1 28 G n 1 29 U n 1 30 U n 1 31 A n 1 32 G n 1 33 G n 1 34 C n 1 35 U n 1 36 C n 1 37 A n 1 38 A n 1 39 A n 1 40 G n 1 41 C n 1 42 G n 1 43 G n 1 44 A n 1 45 G n 1 46 A n 1 47 G n 1 48 C n 1 49 A n 1 50 G n 2 1 U n 2 2 C n 2 3 U n 2 4 G n 2 5 C n 2 6 U n 2 7 C n 2 8 U n 2 9 C n 2 10 Q61 n 2 11 U n 2 12 C n 2 13 C n 2 14 A n 2 15 A n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 50 'Escherichia coli' ? 562 ? 2 1 sample 1 15 'Escherichia coli' ? 562 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 Q61 non-polymer . "guanosine-5'-monophosphate-2',3'-vanadate" ? 'C10 H12 N5 O10 P V' 444.145 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 A 1 1 1 A A A . n A 1 2 C 2 2 2 C C A . n A 1 3 U 3 3 3 U U A . n A 1 4 C 4 4 4 C C A . n A 1 5 G 5 5 5 G G A . n A 1 6 U 6 6 6 U U A . n A 1 7 U 7 7 7 U U A . n A 1 8 U 8 8 8 U U A . n A 1 9 G 9 9 9 G G A . n A 1 10 A 10 10 10 A A A . n A 1 11 G 11 11 11 G G A . n A 1 12 C 12 12 12 C C A . n A 1 13 G 13 13 13 G G A . n A 1 14 A 14 14 14 A A A . n A 1 15 G 15 15 15 G G A . n A 1 16 U 16 16 16 U U A . n A 1 17 A 17 17 17 A A A . n A 1 18 U 18 18 18 U U A . n A 1 19 A 19 19 19 A A A . n A 1 20 A 20 20 20 A A A . n A 1 21 A 21 21 21 A A A . n A 1 22 C 22 22 22 C C A . n A 1 23 A 23 23 23 A A A . n A 1 24 G 24 24 24 G G A . n A 1 25 U 25 25 25 U U A . n A 1 26 U 26 26 26 U U A . n A 1 27 G 27 27 27 G G A . n A 1 28 G 28 28 28 G G A . n A 1 29 U 29 29 29 U U A . n A 1 30 U 30 30 30 U U A . n A 1 31 A 31 31 31 A A A . n A 1 32 G 32 32 32 G G A . n A 1 33 G 33 33 33 G G A . n A 1 34 C 34 34 34 C C A . n A 1 35 U 35 35 35 U U A . n A 1 36 C 36 36 36 C C A . n A 1 37 A 37 37 37 A A A . n A 1 38 A 38 38 38 A A A . n A 1 39 A 39 39 39 A A A . n A 1 40 G 40 40 40 G G A . n A 1 41 C 41 41 41 C C A . n A 1 42 G 42 42 42 G G A . n A 1 43 G 43 43 43 G G A . n A 1 44 A 44 44 44 A A A . n A 1 45 G 45 45 45 G G A . n A 1 46 A 46 46 46 A A A . n A 1 47 G 47 47 47 G G A . n A 1 48 C 48 48 48 C C A . n A 1 49 A 49 49 49 A A A . n A 1 50 G 50 50 50 G G A . n B 2 1 U 1 1 1 U U B . n B 2 2 C 2 2 2 C C B . n B 2 3 U 3 3 3 U U B . n B 2 4 G 4 4 4 G G B . n B 2 5 C 5 5 5 C C B . n B 2 6 U 6 6 6 U U B . n B 2 7 C 7 7 7 C C B . n B 2 8 U 8 8 8 U U B . n B 2 9 C 9 9 9 C C B . n B 2 10 Q61 10 10 10 Q61 GVA B . n B 2 11 U 11 11 11 U U B . n B 2 12 C 12 12 12 C C B . n B 2 13 C 13 13 13 C C B . n B 2 14 A 14 14 14 A A B . n B 2 15 A 15 15 15 A A B . n C 1 1 A 1 1 1 A A C . n C 1 2 C 2 2 2 C C C . n C 1 3 U 3 3 3 U U C . n C 1 4 C 4 4 4 C C C . n C 1 5 G 5 5 5 G G C . n C 1 6 U 6 6 6 U U C . n C 1 7 U 7 7 7 U U C . n C 1 8 U 8 8 8 U U C . n C 1 9 G 9 9 9 G G C . n C 1 10 A 10 10 10 A A C . n C 1 11 G 11 11 11 G G C . n C 1 12 C 12 12 12 C C C . n C 1 13 G 13 13 13 G G C . n C 1 14 A 14 14 14 A A C . n C 1 15 G 15 15 15 G G C . n C 1 16 U 16 16 16 U U C . n C 1 17 A 17 17 17 A A C . n C 1 18 U 18 18 18 U U C . n C 1 19 A 19 19 19 A A C . n C 1 20 A 20 20 20 A A C . n C 1 21 A 21 21 21 A A C . n C 1 22 C 22 22 22 C C C . n C 1 23 A 23 23 23 A A C . n C 1 24 G 24 24 24 G G C . n C 1 25 U 25 25 25 U U C . n C 1 26 U 26 26 26 U U C . n C 1 27 G 27 27 27 G G C . n C 1 28 G 28 28 28 G G C . n C 1 29 U 29 29 29 U U C . n C 1 30 U 30 30 30 U U C . n C 1 31 A 31 31 31 A A C . n C 1 32 G 32 32 32 G G C . n C 1 33 G 33 33 33 G G C . n C 1 34 C 34 34 34 C C C . n C 1 35 U 35 35 35 U U C . n C 1 36 C 36 36 36 C C C . n C 1 37 A 37 37 37 A A C . n C 1 38 A 38 38 38 A A C . n C 1 39 A 39 39 39 A A C . n C 1 40 G 40 40 40 G G C . n C 1 41 C 41 41 41 C C C . n C 1 42 G 42 42 42 G G C . n C 1 43 G 43 43 43 G G C . n C 1 44 A 44 44 44 A A C . n C 1 45 G 45 45 45 G G C . n C 1 46 A 46 46 46 A A C . n C 1 47 G 47 47 47 G G C . n C 1 48 C 48 48 48 C C C . n C 1 49 A 49 49 49 A A C . n C 1 50 G 50 50 50 G G C . n D 2 1 U 1 1 1 U U D . n D 2 2 C 2 2 2 C C D . n D 2 3 U 3 3 3 U U D . n D 2 4 G 4 4 4 G G D . n D 2 5 C 5 5 5 C C D . n D 2 6 U 6 6 6 U U D . n D 2 7 C 7 7 7 C C D . n D 2 8 U 8 8 8 U U D . n D 2 9 C 9 9 9 C C D . n D 2 10 Q61 10 10 10 Q61 GVA D . n D 2 11 U 11 11 11 U U D . n D 2 12 C 12 12 12 C C D . n D 2 13 C 13 13 13 C C D . n D 2 14 A 14 14 14 A A D . n D 2 15 A 15 15 15 A A D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 MG 1 101 1 MG MG A . F 3 MG 1 102 2 MG MG A . G 3 MG 1 103 8 MG MG A . H 3 MG 1 104 9 MG MG A . I 3 MG 1 101 3 MG MG C . J 3 MG 1 102 4 MG MG C . K 3 MG 1 103 5 MG MG C . L 3 MG 1 104 6 MG MG C . M 3 MG 1 105 7 MG MG C . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.15.2_3472 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6UEY _cell.details ? _cell.formula_units_Z ? _cell.length_a 91.829 _cell.length_a_esd ? _cell.length_b 91.829 _cell.length_b_esd ? _cell.length_c 123.444 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6UEY _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6UEY _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.14 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 60.89 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M sodium acetate, pH 4.6, 0.02 M calcium chloride, 25% MPD' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-02-21 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Cryogenically-cooled single crystal Si(220) side bounce' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97918 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6UEY _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.8 _reflns.d_resolution_low 45.9 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 13611 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 10.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 37.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.987 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.8 _reflns_shell.d_res_low 2.85 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 675 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.017 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 218.170 _refine.B_iso_mean 120.3043 _refine.B_iso_min 70.270 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6UEY _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.8000 _refine.ls_d_res_low 19.6520 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 13303 _refine.ls_number_reflns_R_free 1325 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.3900 _refine.ls_percent_reflns_R_free 9.9600 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2157 _refine.ls_R_factor_R_free 0.2515 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2118 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 30.8400 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3600 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.8000 _refine_hist.d_res_low 19.6520 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2773 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 130 _refine_hist.pdbx_B_iso_mean_ligand 87.30 _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 2764 _refine_hist.pdbx_number_atoms_ligand 9 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight _refine_ls_restr_ncs.pdbx_ens_id 'X-RAY DIFFRACTION' 1 ? ? ? ? ? 1 TORSIONAL ? A 1192 5.929 ? 1 'X-RAY DIFFRACTION' 2 ? ? ? ? ? 2 TORSIONAL ? C 1192 5.929 ? 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? 3 TORSIONAL ? B 340 5.929 ? 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? 4 TORSIONAL ? D 340 5.929 ? 2 # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.8002 2.9120 . . 144 1284 98.0000 . . . 0.4121 0.0000 0.3499 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9120 3.0441 . . 136 1295 98.0000 . . . 0.3964 0.0000 0.3224 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0441 3.2039 . . 143 1295 97.0000 . . . 0.3236 0.0000 0.3015 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2039 3.4037 . . 144 1270 96.0000 . . . 0.2731 0.0000 0.2462 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4037 3.6649 . . 147 1321 98.0000 . . . 0.2658 0.0000 0.2263 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.6649 4.0309 . . 144 1317 99.0000 . . . 0.1940 0.0000 0.1980 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.0309 4.6076 . . 152 1364 100.0000 . . . 0.2447 0.0000 0.1974 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.6076 5.7804 . . 152 1373 100.0000 . . . 0.2224 0.0000 0.1926 . . . . . . . . . . 'X-RAY DIFFRACTION' 5.7804 19.6520 . . 163 1459 100.0000 . . . 0.2490 0.0000 0.1902 . . . . . . . . . . # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 'chain A' 1 2 'chain C' 2 1 'chain B' 2 2 'chain D' # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 A A 1 . A G 50 . A A 1 A G 50 ? 'chain A' 1 2 1 C A 1 . C G 50 . C A 1 C G 50 ? 'chain C' 2 1 1 B U 1 . B A 15 . B U 1 B A 15 ? 'chain B' 2 2 1 D U 1 . D A 15 . D U 1 D A 15 ? 'chain D' # loop_ _struct_ncs_ens.id _struct_ncs_ens.details 1 ? 2 ? # _struct.entry_id 6UEY _struct.title 'Pistol ribozyme transition-state analog vanadate' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6UEY _struct_keywords.text ;Self-cleaving ribozymes, transesterification reaction, pre-catalytic state, pentavalent transition state analog, cyclophosphate product, RNA ; _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 6UEY 6UEY ? 1 ? 1 2 PDB 6UEY 6UEY ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6UEY A 1 ? 50 ? 6UEY 1 ? 50 ? 1 50 2 2 6UEY B 1 ? 15 ? 6UEY 1 ? 15 ? 1 15 3 1 6UEY C 1 ? 50 ? 6UEY 1 ? 50 ? 1 50 4 2 6UEY D 1 ? 15 ? 6UEY 1 ? 15 ? 1 15 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2220 ? 1 MORE -37 ? 1 'SSA (A^2)' 10520 ? 2 'ABSA (A^2)' 2350 ? 2 MORE -46 ? 2 'SSA (A^2)' 10360 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,F,G,H 2 1 C,D,I,J,K,L,M # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B C 9 "O3'" ? ? ? 1_555 B Q61 10 P ? ? B C 9 B Q61 10 1_555 ? ? ? ? ? ? ? 1.605 ? ? covale2 covale both ? D C 9 "O3'" ? ? ? 1_555 D Q61 10 P ? ? D C 9 D Q61 10 1_555 ? ? ? ? ? ? ? 1.601 ? ? metalc1 metalc ? ? A U 7 OP1 ? ? ? 1_555 H MG . MG ? ? A U 7 A MG 104 1_555 ? ? ? ? ? ? ? 2.003 ? ? metalc2 metalc one ? A G 33 N7 ? ? ? 1_555 E MG . MG ? ? A G 33 A MG 101 1_555 ? ? ? ? ? ? ? 2.636 ? ? metalc3 metalc ? ? B Q61 10 V ? ? ? 1_555 B U 11 "O5'" ? ? B Q61 10 B U 11 1_555 ? ? ? ? ? ? ? 1.986 ? ? metalc4 metalc ? ? C U 7 OP1 ? ? ? 1_555 L MG . MG ? ? C U 7 C MG 104 1_555 ? ? ? ? ? ? ? 2.076 ? ? metalc5 metalc one ? C G 33 N7 ? ? ? 1_555 I MG . MG ? ? C G 33 C MG 101 1_555 ? ? ? ? ? ? ? 2.710 ? ? metalc6 metalc one ? C A 38 N7 ? ? ? 1_555 J MG . MG ? ? C A 38 C MG 102 1_555 ? ? ? ? ? ? ? 2.873 ? ? metalc7 metalc ? ? C G 42 OP2 ? ? ? 1_555 K MG . MG ? ? C G 42 C MG 103 1_555 ? ? ? ? ? ? ? 2.340 ? ? metalc8 metalc ? ? D Q61 10 V ? ? ? 1_555 D U 11 "O5'" ? ? D Q61 10 D U 11 1_555 ? ? ? ? ? ? ? 1.984 ? ? hydrog1 hydrog ? ? A C 2 N3 ? ? ? 1_555 A G 15 N1 ? ? A C 2 A G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C 2 N4 ? ? ? 1_555 A G 15 O6 ? ? A C 2 A G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 2 O2 ? ? ? 1_555 A G 15 N2 ? ? A C 2 A G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A U 3 N3 ? ? ? 1_555 A A 14 N1 ? ? A U 3 A A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A U 3 O4 ? ? ? 1_555 A A 14 N6 ? ? A U 3 A A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 13 N1 ? ? A C 4 A G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 13 O6 ? ? A C 4 A G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 13 N2 ? ? A C 4 A G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 4 O2 ? ? ? 1_555 A A 20 N6 ? ? A C 4 A A 20 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog10 hydrog ? ? A C 4 O2 ? ? ? 1_555 A A 21 N6 ? ? A C 4 A A 21 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog11 hydrog ? ? A G 5 N1 ? ? ? 1_555 A C 12 N3 ? ? A G 5 A C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 5 N2 ? ? ? 1_555 A C 12 O2 ? ? A G 5 A C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 5 O6 ? ? ? 1_555 A C 12 N4 ? ? A G 5 A C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 5 N2 ? ? ? 1_555 A G 24 N3 ? ? A G 5 A G 24 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog15 hydrog ? ? A G 5 N3 ? ? ? 1_555 A G 24 N2 ? ? A G 5 A G 24 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog16 hydrog ? ? A U 6 N3 ? ? ? 1_555 A A 39 N1 ? ? A U 6 A A 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A U 6 O4 ? ? ? 1_555 A A 39 N6 ? ? A U 6 A A 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A U 7 N3 ? ? ? 1_555 A A 38 N1 ? ? A U 7 A A 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A U 7 O4 ? ? ? 1_555 A A 38 N6 ? ? A U 7 A A 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A U 8 N3 ? ? ? 1_555 A A 37 N1 ? ? A U 8 A A 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A U 8 O4 ? ? ? 1_555 A A 37 N6 ? ? A U 8 A A 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 9 N1 ? ? ? 1_555 A C 36 N3 ? ? A G 9 A C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 9 N2 ? ? ? 1_555 A C 36 O2 ? ? A G 9 A C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 9 O6 ? ? ? 1_555 A C 36 N4 ? ? A G 9 A C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A A 10 N1 ? ? ? 1_555 A U 35 N3 ? ? A A 10 A U 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A A 10 N6 ? ? ? 1_555 A U 35 O4 ? ? A A 10 A U 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 11 N1 ? ? ? 1_555 A C 34 N3 ? ? A G 11 A C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 11 N2 ? ? ? 1_555 A C 34 O2 ? ? A G 11 A C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 11 O6 ? ? ? 1_555 A C 34 N4 ? ? A G 11 A C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A G 13 N2 ? ? ? 1_555 A A 21 N1 ? ? A G 13 A A 21 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog31 hydrog ? ? A A 14 N3 ? ? ? 1_555 A A 20 N6 ? ? A A 14 A A 20 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog32 hydrog ? ? A G 15 N2 ? ? ? 1_555 A U 18 O4 ? ? A G 15 A U 18 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog33 hydrog ? ? A G 15 N3 ? ? ? 1_555 A A 19 N6 ? ? A G 15 A A 19 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog34 hydrog ? ? A U 16 N3 ? ? ? 1_555 C A 1 N7 ? ? A U 16 C A 1 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog35 hydrog ? ? A U 16 O4 ? ? ? 1_555 C A 1 N6 ? ? A U 16 C A 1 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog36 hydrog ? ? A U 25 N3 ? ? ? 1_555 B A 15 N1 ? ? A U 25 B A 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A U 25 O4 ? ? ? 1_555 B A 15 N6 ? ? A U 25 B A 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A U 26 N3 ? ? ? 1_555 B A 14 N1 ? ? A U 26 B A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A U 26 O4 ? ? ? 1_555 B A 14 N6 ? ? A U 26 B A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A G 27 N1 ? ? ? 1_555 B C 13 N3 ? ? A G 27 B C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A G 27 N2 ? ? ? 1_555 B C 13 O2 ? ? A G 27 B C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A G 27 O6 ? ? ? 1_555 B C 13 N4 ? ? A G 27 B C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A G 28 N1 ? ? ? 1_555 B C 12 N3 ? ? A G 28 B C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 28 N2 ? ? ? 1_555 B C 12 O2 ? ? A G 28 B C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A G 28 O6 ? ? ? 1_555 B C 12 N4 ? ? A G 28 B C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A U 29 N3 ? ? ? 1_555 B U 11 O4 ? ? A U 29 B U 11 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog47 hydrog ? ? A U 29 O2 ? ? ? 1_555 B U 11 N3 ? ? A U 29 B U 11 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog48 hydrog ? ? A A 31 N1 ? ? ? 1_555 A G 43 N2 ? ? A A 31 A G 43 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog49 hydrog ? ? A G 33 O6 ? ? ? 1_555 A G 40 N2 ? ? A G 33 A G 40 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog50 hydrog ? ? A G 33 N1 ? ? ? 1_555 A C 41 N3 ? ? A G 33 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A G 33 N2 ? ? ? 1_555 A C 41 O2 ? ? A G 33 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 33 O6 ? ? ? 1_555 A C 41 N4 ? ? A G 33 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A G 43 N1 ? ? ? 1_555 B C 9 N3 ? ? A G 43 B C 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A G 43 N2 ? ? ? 1_555 B C 9 O2 ? ? A G 43 B C 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A G 43 O6 ? ? ? 1_555 B C 9 N4 ? ? A G 43 B C 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A A 44 N1 ? ? ? 1_555 B U 8 N3 ? ? A A 44 B U 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A A 44 N6 ? ? ? 1_555 B U 8 O4 ? ? A A 44 B U 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 45 N1 ? ? ? 1_555 B C 7 N3 ? ? A G 45 B C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A G 45 N2 ? ? ? 1_555 B C 7 O2 ? ? A G 45 B C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A G 45 O6 ? ? ? 1_555 B C 7 N4 ? ? A G 45 B C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A A 46 N1 ? ? ? 1_555 B U 6 N3 ? ? A A 46 B U 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A A 46 N6 ? ? ? 1_555 B U 6 O4 ? ? A A 46 B U 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A G 47 N1 ? ? ? 1_555 B C 5 N3 ? ? A G 47 B C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A G 47 N2 ? ? ? 1_555 B C 5 O2 ? ? A G 47 B C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A G 47 O6 ? ? ? 1_555 B C 5 N4 ? ? A G 47 B C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A C 48 N3 ? ? ? 1_555 B G 4 N1 ? ? A C 48 B G 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A C 48 N4 ? ? ? 1_555 B G 4 O6 ? ? A C 48 B G 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A C 48 O2 ? ? ? 1_555 B G 4 N2 ? ? A C 48 B G 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A A 49 N1 ? ? ? 1_555 B U 3 N3 ? ? A A 49 B U 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A A 49 N6 ? ? ? 1_555 B U 3 O4 ? ? A A 49 B U 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A G 50 N1 ? ? ? 1_555 B C 2 N3 ? ? A G 50 B C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A G 50 N2 ? ? ? 1_555 B C 2 O2 ? ? A G 50 B C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A G 50 O6 ? ? ? 1_555 B C 2 N4 ? ? A G 50 B C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? C A 1 N1 ? ? ? 1_555 C U 16 N3 ? ? C A 1 C U 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? C A 1 N6 ? ? ? 1_555 C U 16 O4 ? ? C A 1 C U 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? C C 2 N3 ? ? ? 1_555 C G 15 N1 ? ? C C 2 C G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? C C 2 N4 ? ? ? 1_555 C G 15 O6 ? ? C C 2 C G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? C C 2 O2 ? ? ? 1_555 C G 15 N2 ? ? C C 2 C G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? C U 3 N3 ? ? ? 1_555 C A 14 N1 ? ? C U 3 C A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? C U 3 O4 ? ? ? 1_555 C A 14 N6 ? ? C U 3 C A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? C C 4 N3 ? ? ? 1_555 C G 13 N1 ? ? C C 4 C G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? C C 4 N4 ? ? ? 1_555 C G 13 O6 ? ? C C 4 C G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? C C 4 O2 ? ? ? 1_555 C G 13 N2 ? ? C C 4 C G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? C C 4 O2 ? ? ? 1_555 C A 20 N6 ? ? C C 4 C A 20 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog85 hydrog ? ? C C 4 O2 ? ? ? 1_555 C A 21 N6 ? ? C C 4 C A 21 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog86 hydrog ? ? C G 5 N1 ? ? ? 1_555 C C 12 N3 ? ? C G 5 C C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? C G 5 N2 ? ? ? 1_555 C C 12 O2 ? ? C G 5 C C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? C G 5 O6 ? ? ? 1_555 C C 12 N4 ? ? C G 5 C C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? C G 5 N2 ? ? ? 1_555 C G 24 N3 ? ? C G 5 C G 24 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog90 hydrog ? ? C G 5 N3 ? ? ? 1_555 C G 24 N2 ? ? C G 5 C G 24 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog91 hydrog ? ? C U 6 N3 ? ? ? 1_555 C A 39 N1 ? ? C U 6 C A 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? C U 6 O4 ? ? ? 1_555 C A 39 N6 ? ? C U 6 C A 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? C U 7 N3 ? ? ? 1_555 C A 38 N1 ? ? C U 7 C A 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? C U 7 O4 ? ? ? 1_555 C A 38 N6 ? ? C U 7 C A 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? C U 8 N3 ? ? ? 1_555 C A 37 N1 ? ? C U 8 C A 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? C U 8 O4 ? ? ? 1_555 C A 37 N6 ? ? C U 8 C A 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? C G 9 N1 ? ? ? 1_555 C C 36 N3 ? ? C G 9 C C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? C G 9 N2 ? ? ? 1_555 C C 36 O2 ? ? C G 9 C C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? C G 9 O6 ? ? ? 1_555 C C 36 N4 ? ? C G 9 C C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? C A 10 N1 ? ? ? 1_555 C U 35 N3 ? ? C A 10 C U 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? C A 10 N6 ? ? ? 1_555 C U 35 O4 ? ? C A 10 C U 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? C G 11 N1 ? ? ? 1_555 C C 34 N3 ? ? C G 11 C C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? C G 11 N2 ? ? ? 1_555 C C 34 O2 ? ? C G 11 C C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? C G 11 O6 ? ? ? 1_555 C C 34 N4 ? ? C G 11 C C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? C G 13 N2 ? ? ? 1_555 C A 21 N1 ? ? C G 13 C A 21 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog106 hydrog ? ? C A 14 N3 ? ? ? 1_555 C A 20 N6 ? ? C A 14 C A 20 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog107 hydrog ? ? C G 15 N2 ? ? ? 1_555 C U 18 O4 ? ? C G 15 C U 18 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog108 hydrog ? ? C G 15 N3 ? ? ? 1_555 C A 19 N6 ? ? C G 15 C A 19 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog109 hydrog ? ? C U 25 N3 ? ? ? 1_555 D A 15 N1 ? ? C U 25 D A 15 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog110 hydrog ? ? C U 26 N3 ? ? ? 1_555 D A 14 N1 ? ? C U 26 D A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? C U 26 O4 ? ? ? 1_555 D A 14 N6 ? ? C U 26 D A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? C G 27 N1 ? ? ? 1_555 D C 13 N3 ? ? C G 27 D C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? C G 27 N2 ? ? ? 1_555 D C 13 O2 ? ? C G 27 D C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? C G 27 O6 ? ? ? 1_555 D C 13 N4 ? ? C G 27 D C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? C G 28 N1 ? ? ? 1_555 D C 12 N3 ? ? C G 28 D C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? C G 28 N2 ? ? ? 1_555 D C 12 O2 ? ? C G 28 D C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? C G 28 O6 ? ? ? 1_555 D C 12 N4 ? ? C G 28 D C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? C U 29 N3 ? ? ? 1_555 D U 11 O4 ? ? C U 29 D U 11 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog119 hydrog ? ? C U 29 O2 ? ? ? 1_555 D U 11 N3 ? ? C U 29 D U 11 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog120 hydrog ? ? C A 31 N1 ? ? ? 1_555 C G 43 N2 ? ? C A 31 C G 43 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog121 hydrog ? ? C G 33 N1 ? ? ? 1_555 C C 41 N3 ? ? C G 33 C C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog122 hydrog ? ? C G 33 N2 ? ? ? 1_555 C C 41 O2 ? ? C G 33 C C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? C G 33 O6 ? ? ? 1_555 C C 41 N4 ? ? C G 33 C C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? C G 40 N2 ? ? ? 1_555 C G 42 O6 ? ? C G 40 C G 42 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog125 hydrog ? ? C G 43 N1 ? ? ? 1_555 D C 9 N3 ? ? C G 43 D C 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? C G 43 N2 ? ? ? 1_555 D C 9 O2 ? ? C G 43 D C 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? C G 43 O6 ? ? ? 1_555 D C 9 N4 ? ? C G 43 D C 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? C A 44 N1 ? ? ? 1_555 D U 8 N3 ? ? C A 44 D U 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? C A 44 N6 ? ? ? 1_555 D U 8 O4 ? ? C A 44 D U 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? C G 45 N1 ? ? ? 1_555 D C 7 N3 ? ? C G 45 D C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? C G 45 N2 ? ? ? 1_555 D C 7 O2 ? ? C G 45 D C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? C G 45 O6 ? ? ? 1_555 D C 7 N4 ? ? C G 45 D C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? C A 46 N1 ? ? ? 1_555 D U 6 N3 ? ? C A 46 D U 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? C A 46 N6 ? ? ? 1_555 D U 6 O4 ? ? C A 46 D U 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? C G 47 N1 ? ? ? 1_555 D C 5 N3 ? ? C G 47 D C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog136 hydrog ? ? C G 47 N2 ? ? ? 1_555 D C 5 O2 ? ? C G 47 D C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog137 hydrog ? ? C G 47 O6 ? ? ? 1_555 D C 5 N4 ? ? C G 47 D C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog138 hydrog ? ? C C 48 N3 ? ? ? 1_555 D G 4 N1 ? ? C C 48 D G 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog139 hydrog ? ? C C 48 N4 ? ? ? 1_555 D G 4 O6 ? ? C C 48 D G 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog140 hydrog ? ? C C 48 O2 ? ? ? 1_555 D G 4 N2 ? ? C C 48 D G 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog141 hydrog ? ? C A 49 N1 ? ? ? 1_555 D U 3 N3 ? ? C A 49 D U 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog142 hydrog ? ? C A 49 N6 ? ? ? 1_555 D U 3 O4 ? ? C A 49 D U 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog143 hydrog ? ? C G 50 N1 ? ? ? 1_555 D C 2 N3 ? ? C G 50 D C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog144 hydrog ? ? C G 50 N2 ? ? ? 1_555 D C 2 O2 ? ? C G 50 D C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog145 hydrog ? ? C G 50 O6 ? ? ? 1_555 D C 2 N4 ? ? C G 50 D C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 "O5'" ? B U 11 ? B U 11 ? 1_555 V ? B Q61 10 ? B Q61 10 ? 1_555 O1V ? B Q61 10 ? B Q61 10 ? 1_555 95.0 ? 2 "O5'" ? B U 11 ? B U 11 ? 1_555 V ? B Q61 10 ? B Q61 10 ? 1_555 "O3'" ? B Q61 10 ? B Q61 10 ? 1_555 72.0 ? 3 O1V ? B Q61 10 ? B Q61 10 ? 1_555 V ? B Q61 10 ? B Q61 10 ? 1_555 "O3'" ? B Q61 10 ? B Q61 10 ? 1_555 120.9 ? 4 "O5'" ? B U 11 ? B U 11 ? 1_555 V ? B Q61 10 ? B Q61 10 ? 1_555 "O2'" ? B Q61 10 ? B Q61 10 ? 1_555 153.2 ? 5 O1V ? B Q61 10 ? B Q61 10 ? 1_555 V ? B Q61 10 ? B Q61 10 ? 1_555 "O2'" ? B Q61 10 ? B Q61 10 ? 1_555 102.9 ? 6 "O3'" ? B Q61 10 ? B Q61 10 ? 1_555 V ? B Q61 10 ? B Q61 10 ? 1_555 "O2'" ? B Q61 10 ? B Q61 10 ? 1_555 81.6 ? 7 "O5'" ? B U 11 ? B U 11 ? 1_555 V ? B Q61 10 ? B Q61 10 ? 1_555 O2V ? B Q61 10 ? B Q61 10 ? 1_555 98.2 ? 8 O1V ? B Q61 10 ? B Q61 10 ? 1_555 V ? B Q61 10 ? B Q61 10 ? 1_555 O2V ? B Q61 10 ? B Q61 10 ? 1_555 102.1 ? 9 "O3'" ? B Q61 10 ? B Q61 10 ? 1_555 V ? B Q61 10 ? B Q61 10 ? 1_555 O2V ? B Q61 10 ? B Q61 10 ? 1_555 136.2 ? 10 "O2'" ? B Q61 10 ? B Q61 10 ? 1_555 V ? B Q61 10 ? B Q61 10 ? 1_555 O2V ? B Q61 10 ? B Q61 10 ? 1_555 97.4 ? 11 "O5'" ? D U 11 ? D U 11 ? 1_555 V ? D Q61 10 ? D Q61 10 ? 1_555 O1V ? D Q61 10 ? D Q61 10 ? 1_555 97.0 ? 12 "O5'" ? D U 11 ? D U 11 ? 1_555 V ? D Q61 10 ? D Q61 10 ? 1_555 "O3'" ? D Q61 10 ? D Q61 10 ? 1_555 68.2 ? 13 O1V ? D Q61 10 ? D Q61 10 ? 1_555 V ? D Q61 10 ? D Q61 10 ? 1_555 "O3'" ? D Q61 10 ? D Q61 10 ? 1_555 119.6 ? 14 "O5'" ? D U 11 ? D U 11 ? 1_555 V ? D Q61 10 ? D Q61 10 ? 1_555 "O2'" ? D Q61 10 ? D Q61 10 ? 1_555 148.6 ? 15 O1V ? D Q61 10 ? D Q61 10 ? 1_555 V ? D Q61 10 ? D Q61 10 ? 1_555 "O2'" ? D Q61 10 ? D Q61 10 ? 1_555 107.2 ? 16 "O3'" ? D Q61 10 ? D Q61 10 ? 1_555 V ? D Q61 10 ? D Q61 10 ? 1_555 "O2'" ? D Q61 10 ? D Q61 10 ? 1_555 82.3 ? 17 "O5'" ? D U 11 ? D U 11 ? 1_555 V ? D Q61 10 ? D Q61 10 ? 1_555 O2V ? D Q61 10 ? D Q61 10 ? 1_555 99.6 ? 18 O1V ? D Q61 10 ? D Q61 10 ? 1_555 V ? D Q61 10 ? D Q61 10 ? 1_555 O2V ? D Q61 10 ? D Q61 10 ? 1_555 99.5 ? 19 "O3'" ? D Q61 10 ? D Q61 10 ? 1_555 V ? D Q61 10 ? D Q61 10 ? 1_555 O2V ? D Q61 10 ? D Q61 10 ? 1_555 139.7 ? 20 "O2'" ? D Q61 10 ? D Q61 10 ? 1_555 V ? D Q61 10 ? D Q61 10 ? 1_555 O2V ? D Q61 10 ? D Q61 10 ? 1_555 96.0 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 101 ? 2 'binding site for residue MG A 101' AC2 Software A MG 102 ? 2 'binding site for residue MG A 102' AC3 Software A MG 103 ? 1 'binding site for residue MG A 103' AC4 Software A MG 104 ? 1 'binding site for residue MG A 104' AC5 Software C MG 101 ? 1 'binding site for residue MG C 101' AC6 Software C MG 102 ? 1 'binding site for residue MG C 102' AC7 Software C MG 103 ? 2 'binding site for residue MG C 103' AC8 Software C MG 104 ? 1 'binding site for residue MG C 104' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 G A 33 ? G A 33 . ? 1_555 ? 2 AC1 2 Q61 B 10 ? Q61 B 10 . ? 1_555 ? 3 AC2 2 A A 37 ? A A 37 . ? 1_555 ? 4 AC2 2 A A 38 ? A A 38 . ? 1_555 ? 5 AC3 1 A A 10 ? A A 10 . ? 1_555 ? 6 AC4 1 U A 7 ? U A 7 . ? 1_555 ? 7 AC5 1 G C 33 ? G C 33 . ? 1_555 ? 8 AC6 1 A C 38 ? A C 38 . ? 1_555 ? 9 AC7 2 C C 41 ? C C 41 . ? 1_555 ? 10 AC7 2 G C 42 ? G C 42 . ? 1_555 ? 11 AC8 1 U C 7 ? U C 7 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N1 C C 34 ? ? C2 C C 34 ? ? O2 C C 34 ? ? 122.67 118.90 3.77 0.60 N 2 1 N3 C C 34 ? ? C2 C C 34 ? ? O2 C C 34 ? ? 116.10 121.90 -5.80 0.70 N # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 205.2212 133.3237 137.7233 1.9063 ? 0.2228 ? -0.0770 ? 1.0028 ? -0.0011 ? 0.5898 ? 5.5433 ? -0.1050 ? 3.6620 ? 1.8265 ? 0.4935 ? 7.7577 ? -0.0285 ? 0.0549 ? 0.2493 ? -0.0411 ? -0.2807 ? 0.0796 ? -0.7777 ? 1.3668 ? 0.3289 ? 2 'X-RAY DIFFRACTION' ? refined 215.3749 140.0980 144.8307 2.2122 ? -0.1944 ? -0.0916 ? 1.9776 ? 0.0281 ? 0.8065 ? 3.3212 ? 1.5808 ? 0.7194 ? 2.3753 ? -0.3476 ? 1.3250 ? 0.4143 ? 0.5460 ? 1.1621 ? -1.4349 ? -0.0949 ? -0.2243 ? -1.9033 ? 2.1186 ? -0.1781 ? 3 'X-RAY DIFFRACTION' ? refined 181.4217 112.8014 111.5677 1.4606 ? 0.5085 ? -0.1979 ? 0.9686 ? -0.0027 ? 0.6230 ? 2.4238 ? 0.7340 ? -0.5500 ? 4.8904 ? -0.2464 ? 3.6110 ? 0.0864 ? 0.5648 ? 0.3756 ? 0.6281 ? 0.1873 ? -0.1832 ? 0.7227 ? -0.4043 ? -0.2586 ? 4 'X-RAY DIFFRACTION' ? refined 174.7021 104.3235 102.8206 2.2562 ? 0.3019 ? -0.1869 ? 1.2854 ? 0.0526 ? 0.5617 ? 2.3825 ? 1.5129 ? -2.5293 ? 1.0409 ? -1.5857 ? 2.7127 ? 0.1565 ? 1.0695 ? -0.0437 ? 0.4941 ? 0.6345 ? 0.8046 ? 1.7634 ? -0.8045 ? -0.6503 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 1 ? ? A 50 ? ;chain 'A' and (resid 1 through 51) ; 2 'X-RAY DIFFRACTION' 2 ? ? B 1 ? ? B 15 ? ;chain 'B' and (resid 1 through 15) ; 3 'X-RAY DIFFRACTION' 3 ? ? C 1 ? ? C 50 ? ;chain 'C' and (resid 1 through 51) ; 4 'X-RAY DIFFRACTION' 4 ? ? D 1 ? ? D 15 ? ;chain 'D' and (resid 1 through 15) ; # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 MG MG MG N N 111 Q61 "C1'" C N R 112 Q61 C2 C N N 113 Q61 "C2'" C N R 114 Q61 "C3'" C N R 115 Q61 C4 C Y N 116 Q61 "C4'" C N R 117 Q61 C5 C Y N 118 Q61 "C5'" C N N 119 Q61 C6 C N N 120 Q61 C8 C Y N 121 Q61 N1 N N N 122 Q61 N2 N N N 123 Q61 N3 N N N 124 Q61 N7 N Y N 125 Q61 N9 N Y N 126 Q61 O1V O N N 127 Q61 "O2'" O N N 128 Q61 O2V O N N 129 Q61 "O3'" O N N 130 Q61 "O4'" O N N 131 Q61 "O5'" O N N 132 Q61 O6 O N N 133 Q61 OP1 O N N 134 Q61 OP2 O N N 135 Q61 P P N N 136 Q61 V V N N 137 Q61 H1 H N N 138 Q61 H2 H N N 139 Q61 H3 H N N 140 Q61 H4 H N N 141 Q61 H5 H N N 142 Q61 H6 H N N 143 Q61 H7 H N N 144 Q61 H8 H N N 145 Q61 H9 H N N 146 Q61 H10 H N N 147 Q61 H14 H N N 148 Q61 OP3 O N N 149 Q61 H11 H N N 150 U OP3 O N N 151 U P P N N 152 U OP1 O N N 153 U OP2 O N N 154 U "O5'" O N N 155 U "C5'" C N N 156 U "C4'" C N R 157 U "O4'" O N N 158 U "C3'" C N S 159 U "O3'" O N N 160 U "C2'" C N R 161 U "O2'" O N N 162 U "C1'" C N R 163 U N1 N N N 164 U C2 C N N 165 U O2 O N N 166 U N3 N N N 167 U C4 C N N 168 U O4 O N N 169 U C5 C N N 170 U C6 C N N 171 U HOP3 H N N 172 U HOP2 H N N 173 U "H5'" H N N 174 U "H5''" H N N 175 U "H4'" H N N 176 U "H3'" H N N 177 U "HO3'" H N N 178 U "H2'" H N N 179 U "HO2'" H N N 180 U "H1'" H N N 181 U H3 H N N 182 U H5 H N N 183 U H6 H N N 184 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 Q61 O1V V doub N N 116 Q61 OP1 P doub N N 117 Q61 OP2 P sing N N 118 Q61 P "O5'" sing N N 119 Q61 "O3'" "C3'" sing N N 120 Q61 "O3'" V sing N N 121 Q61 "C3'" "C2'" sing N N 122 Q61 "C3'" "C4'" sing N N 123 Q61 V "O2'" sing N N 124 Q61 V O2V sing N N 125 Q61 "O5'" "C5'" sing N N 126 Q61 "C2'" "O2'" sing N N 127 Q61 "C2'" "C1'" sing N N 128 Q61 "C5'" "C4'" sing N N 129 Q61 "C4'" "O4'" sing N N 130 Q61 C8 N7 doub Y N 131 Q61 C8 N9 sing Y N 132 Q61 N7 C5 sing Y N 133 Q61 "C1'" N9 sing N N 134 Q61 "C1'" "O4'" sing N N 135 Q61 N9 C4 sing Y N 136 Q61 C5 C4 doub Y N 137 Q61 C5 C6 sing N N 138 Q61 C4 N3 sing N N 139 Q61 O6 C6 doub N N 140 Q61 C6 N1 sing N N 141 Q61 N3 C2 doub N N 142 Q61 N1 C2 sing N N 143 Q61 C2 N2 sing N N 144 Q61 "C1'" H1 sing N N 145 Q61 "C2'" H2 sing N N 146 Q61 "C3'" H3 sing N N 147 Q61 "C4'" H4 sing N N 148 Q61 "C5'" H5 sing N N 149 Q61 "C5'" H6 sing N N 150 Q61 C8 H7 sing N N 151 Q61 N1 H8 sing N N 152 Q61 N2 H9 sing N N 153 Q61 N2 H10 sing N N 154 Q61 OP2 H14 sing N N 155 Q61 P OP3 sing N N 156 Q61 OP3 H11 sing N N 157 U OP3 P sing N N 158 U OP3 HOP3 sing N N 159 U P OP1 doub N N 160 U P OP2 sing N N 161 U P "O5'" sing N N 162 U OP2 HOP2 sing N N 163 U "O5'" "C5'" sing N N 164 U "C5'" "C4'" sing N N 165 U "C5'" "H5'" sing N N 166 U "C5'" "H5''" sing N N 167 U "C4'" "O4'" sing N N 168 U "C4'" "C3'" sing N N 169 U "C4'" "H4'" sing N N 170 U "O4'" "C1'" sing N N 171 U "C3'" "O3'" sing N N 172 U "C3'" "C2'" sing N N 173 U "C3'" "H3'" sing N N 174 U "O3'" "HO3'" sing N N 175 U "C2'" "O2'" sing N N 176 U "C2'" "C1'" sing N N 177 U "C2'" "H2'" sing N N 178 U "O2'" "HO2'" sing N N 179 U "C1'" N1 sing N N 180 U "C1'" "H1'" sing N N 181 U N1 C2 sing N N 182 U N1 C6 sing N N 183 U C2 O2 doub N N 184 U C2 N3 sing N N 185 U N3 C4 sing N N 186 U N3 H3 sing N N 187 U C4 O4 doub N N 188 U C4 C5 sing N N 189 U C5 C6 doub N N 190 U C5 H5 sing N N 191 U C6 H6 sing N N 192 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6UEY 'double helix' 6UEY 'a-form double helix' 6UEY 'bulge loop' 6UEY 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A U 25 1_555 B A 15 1_555 -0.604 0.131 0.680 -5.355 -14.384 4.335 1 A_U25:A15_B A 25 ? B 15 ? 20 1 1 A U 26 1_555 B A 14 1_555 0.197 -0.233 -0.056 3.747 -7.207 -7.044 2 A_U26:A14_B A 26 ? B 14 ? 20 1 1 A G 27 1_555 B C 13 1_555 0.924 -0.333 0.255 5.876 -4.859 -6.096 3 A_G27:C13_B A 27 ? B 13 ? 19 1 1 A G 28 1_555 B C 12 1_555 0.775 -0.184 0.081 4.053 -10.166 1.058 4 A_G28:C12_B A 28 ? B 12 ? 19 1 1 A U 29 1_555 B U 11 1_555 2.828 -2.040 0.214 14.204 -16.745 6.373 5 A_U29:U11_B A 29 ? B 11 ? 16 1 1 A G 33 1_555 A C 41 1_555 0.333 -0.067 0.205 4.846 2.504 -2.548 6 A_G33:C41_A A 33 ? A 41 ? 19 1 1 A U 6 1_555 A A 39 1_555 -0.080 -0.001 -0.238 16.187 -25.842 -7.788 7 A_U6:A39_A A 6 ? A 39 ? 20 1 1 A U 7 1_555 A A 38 1_555 -0.970 0.039 -0.415 -6.808 -25.794 -2.033 8 A_U7:A38_A A 7 ? A 38 ? 20 1 1 A U 8 1_555 A A 37 1_555 -0.158 -0.090 0.213 -9.138 -2.518 0.240 9 A_U8:A37_A A 8 ? A 37 ? 20 1 1 A G 9 1_555 A C 36 1_555 0.076 -0.275 -0.400 -7.495 -9.044 -0.103 10 A_G9:C36_A A 9 ? A 36 ? 19 1 1 A A 10 1_555 A U 35 1_555 0.794 0.086 -0.016 -8.530 -13.541 8.441 11 A_A10:U35_A A 10 ? A 35 ? 20 1 1 A G 11 1_555 A C 34 1_555 -0.032 -0.031 -0.687 -24.220 -23.040 -1.644 12 A_G11:C34_A A 11 ? A 34 ? 19 1 1 A C 12 1_555 A G 5 1_555 0.303 0.016 0.115 -16.181 -4.047 2.588 13 A_C12:G5_A A 12 ? A 5 ? 19 1 1 A G 13 1_555 A C 4 1_555 -0.194 -0.022 -0.116 -9.293 -3.789 1.443 14 A_G13:C4_A A 13 ? A 4 ? 19 1 1 A A 14 1_555 A U 3 1_555 0.307 -0.146 0.335 -4.214 -0.942 4.683 15 A_A14:U3_A A 14 ? A 3 ? 20 1 1 A G 15 1_555 A C 2 1_555 -0.551 -0.246 0.140 -9.283 -20.480 6.260 16 A_G15:C2_A A 15 ? A 2 ? 19 1 1 C A 1 1_555 C U 16 1_555 0.348 0.282 -0.318 -0.205 -18.292 3.427 17 C_A1:U16_C C 1 ? C 16 ? 20 1 1 C C 2 1_555 C G 15 1_555 0.828 -0.281 -0.014 2.013 -18.022 3.957 18 C_C2:G15_C C 2 ? C 15 ? 19 1 1 C U 3 1_555 C A 14 1_555 -0.154 -0.161 -0.156 3.491 2.665 4.320 19 C_U3:A14_C C 3 ? C 14 ? 20 1 1 C C 4 1_555 C G 13 1_555 -0.491 -0.179 -0.439 9.340 -3.622 -4.306 20 C_C4:G13_C C 4 ? C 13 ? 19 1 1 C G 5 1_555 C C 12 1_555 -0.461 0.047 -0.004 10.458 -2.874 4.182 21 C_G5:C12_C C 5 ? C 12 ? 19 1 1 C C 34 1_555 C G 11 1_555 -0.122 -0.057 -0.655 19.840 -23.927 0.967 22 C_C34:G11_C C 34 ? C 11 ? 19 1 1 C U 35 1_555 C A 10 1_555 -0.922 -0.201 -0.249 6.385 -12.939 -0.569 23 C_U35:A10_C C 35 ? C 10 ? 20 1 1 C C 36 1_555 C G 9 1_555 0.334 -0.234 -0.072 -4.621 -10.320 -6.314 24 C_C36:G9_C C 36 ? C 9 ? 19 1 1 C A 37 1_555 C U 8 1_555 0.235 -0.095 0.256 1.750 -11.290 -2.605 25 C_A37:U8_C C 37 ? C 8 ? 20 1 1 C A 38 1_555 C U 7 1_555 0.333 -0.064 0.117 1.071 -25.265 2.381 26 C_A38:U7_C C 38 ? C 7 ? 20 1 1 C A 39 1_555 C U 6 1_555 -0.110 0.188 0.167 -10.845 -25.108 -0.615 27 C_A39:U6_C C 39 ? C 6 ? 20 1 1 C C 41 1_555 C G 33 1_555 0.675 -0.449 0.148 -6.556 -2.451 -4.612 28 C_C41:G33_C C 41 ? C 33 ? 19 1 1 C G 42 1_555 C G 40 1_555 -5.846 0.838 2.352 -0.040 -11.337 35.836 29 C_G42:G40_C C 42 ? C 40 ? ? ? 1 C G 43 1_555 D C 9 1_555 -0.258 -0.130 0.097 -2.187 -1.818 -3.561 30 C_G43:C9_D C 43 ? D 9 ? 19 1 1 C A 44 1_555 D U 8 1_555 0.534 -0.002 0.239 -7.091 -5.905 -3.394 31 C_A44:U8_D C 44 ? D 8 ? 20 1 1 C G 45 1_555 D C 7 1_555 0.519 0.139 0.176 -6.665 -11.319 1.284 32 C_G45:C7_D C 45 ? D 7 ? 19 1 1 C A 46 1_555 D U 6 1_555 0.951 0.163 0.096 -6.424 0.423 -2.214 33 C_A46:U6_D C 46 ? D 6 ? 20 1 1 C G 47 1_555 D C 5 1_555 0.395 -0.128 0.128 -9.011 -7.204 -2.893 34 C_G47:C5_D C 47 ? D 5 ? 19 1 1 C C 48 1_555 D G 4 1_555 0.183 -0.001 0.164 -3.690 -3.227 8.294 35 C_C48:G4_D C 48 ? D 4 ? 19 1 1 C A 49 1_555 D U 3 1_555 0.676 -0.233 -0.006 -1.913 -10.659 5.453 36 C_A49:U3_D C 49 ? D 3 ? 20 1 1 C G 50 1_555 D C 2 1_555 -0.173 -0.412 -0.145 -2.336 -12.858 -1.813 37 C_G50:C2_D C 50 ? D 2 ? 19 1 1 A G 43 1_555 B C 9 1_555 0.317 0.179 -0.187 -8.182 -0.106 -6.649 38 A_G43:C9_B A 43 ? B 9 ? 19 1 1 A A 44 1_555 B U 8 1_555 0.200 0.321 -0.029 -9.294 -5.500 -2.945 39 A_A44:U8_B A 44 ? B 8 ? 20 1 1 A G 45 1_555 B C 7 1_555 0.226 -0.203 0.295 -0.524 -8.351 -4.669 40 A_G45:C7_B A 45 ? B 7 ? 19 1 1 A A 46 1_555 B U 6 1_555 1.295 -0.076 -0.241 -3.754 -1.139 2.003 41 A_A46:U6_B A 46 ? B 6 ? 20 1 1 A G 47 1_555 B C 5 1_555 0.466 -0.001 -0.278 -11.434 -6.803 4.526 42 A_G47:C5_B A 47 ? B 5 ? 19 1 1 A C 48 1_555 B G 4 1_555 0.198 0.278 -0.156 -7.795 -5.112 8.548 43 A_C48:G4_B A 48 ? B 4 ? 19 1 1 A A 49 1_555 B U 3 1_555 0.385 -0.095 0.419 7.410 7.145 5.417 44 A_A49:U3_B A 49 ? B 3 ? 20 1 1 A G 50 1_555 B C 2 1_555 0.486 0.327 -0.631 0.436 -0.447 11.343 45 A_G50:C2_B A 50 ? B 2 ? 19 1 1 C U 25 1_555 D A 15 1_555 0.311 0.470 0.437 -17.420 -15.289 12.763 46 C_U25:A15_D C 25 ? D 15 ? ? 1 1 C U 26 1_555 D A 14 1_555 -0.535 -0.257 -0.165 1.344 -18.734 -0.540 47 C_U26:A14_D C 26 ? D 14 ? 20 1 1 C G 27 1_555 D C 13 1_555 -0.503 -0.223 0.427 4.280 -7.097 -4.778 48 C_G27:C13_D C 27 ? D 13 ? 19 1 1 C G 28 1_555 D C 12 1_555 -0.604 0.077 0.161 9.451 -10.037 7.385 49 C_G28:C12_D C 28 ? D 12 ? 19 1 1 C U 29 1_555 D U 11 1_555 3.074 -1.696 0.300 16.899 -18.816 16.492 50 C_U29:U11_D C 29 ? D 11 ? 16 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A U 25 1_555 B A 15 1_555 A U 26 1_555 B A 14 1_555 -0.655 -1.435 2.982 0.847 1.851 36.098 -2.547 1.163 2.891 2.985 -1.365 36.154 1 AA_U25U26:A14A15_BB A 25 ? B 15 ? A 26 ? B 14 ? 1 A U 26 1_555 B A 14 1_555 A G 27 1_555 B C 13 1_555 -0.130 -1.291 3.199 -1.895 6.500 34.306 -3.076 -0.053 2.916 10.888 3.174 34.948 2 AA_U26G27:C13A14_BB A 26 ? B 14 ? A 27 ? B 13 ? 1 A G 27 1_555 B C 13 1_555 A G 28 1_555 B C 12 1_555 0.595 -2.093 3.172 2.972 9.093 27.033 -6.036 -0.612 2.405 18.723 -6.121 28.646 3 AA_G27G28:C12C13_BB A 27 ? B 13 ? A 28 ? B 12 ? 1 A G 28 1_555 B C 12 1_555 A U 29 1_555 B U 11 1_555 0.392 -1.612 2.898 -1.747 1.822 37.862 -2.682 -0.798 2.801 2.803 2.688 37.943 4 AA_G28U29:U11C12_BB A 28 ? B 12 ? A 29 ? B 11 ? 1 A G 33 1_555 A C 41 1_555 A U 6 1_555 A A 39 1_555 0.908 -3.126 2.760 -0.870 7.487 61.329 -3.322 -0.916 2.389 7.310 0.850 61.746 5 AA_G33U6:A39C41_AA A 33 ? A 41 ? A 6 ? A 39 ? 1 A U 6 1_555 A A 39 1_555 A U 7 1_555 A A 38 1_555 -0.955 -2.529 3.740 -5.211 15.122 27.443 -7.366 0.807 2.220 28.967 9.982 31.686 6 AA_U6U7:A38A39_AA A 6 ? A 39 ? A 7 ? A 38 ? 1 A U 7 1_555 A A 38 1_555 A U 8 1_555 A A 37 1_555 -0.538 -1.113 3.532 -11.047 11.572 33.267 -3.424 -0.735 3.018 18.914 18.054 36.816 7 AA_U7U8:A37A38_AA A 7 ? A 38 ? A 8 ? A 37 ? 1 A U 8 1_555 A A 37 1_555 A G 9 1_555 A C 36 1_555 0.630 -1.136 3.072 6.176 17.554 37.027 -3.283 -0.305 2.391 25.745 -9.058 41.293 8 AA_U8G9:C36A37_AA A 8 ? A 37 ? A 9 ? A 36 ? 1 A G 9 1_555 A C 36 1_555 A A 10 1_555 A U 35 1_555 0.600 -1.341 3.223 1.481 9.460 34.394 -3.475 -0.779 2.790 15.626 -2.447 35.663 9 AA_G9A10:U35C36_AA A 9 ? A 36 ? A 10 ? A 35 ? 1 A A 10 1_555 A U 35 1_555 A G 11 1_555 A C 34 1_555 0.233 -2.314 3.537 7.913 20.502 25.248 -6.954 0.721 1.349 38.826 -14.986 33.355 10 AA_A10G11:C34U35_AA A 10 ? A 35 ? A 11 ? A 34 ? 1 A G 11 1_555 A C 34 1_555 A C 12 1_555 A G 5 1_555 1.727 -0.540 2.922 -3.581 -0.627 49.109 -0.607 -2.307 2.804 -0.753 4.302 49.235 11 AA_G11C12:G5C34_AA A 11 ? A 34 ? A 12 ? A 5 ? 1 A C 12 1_555 A G 5 1_555 A G 13 1_555 A C 4 1_555 0.968 -1.888 3.047 -1.053 16.446 26.023 -6.038 -1.986 1.564 32.681 2.092 30.726 12 AA_C12G13:C4G5_AA A 12 ? A 5 ? A 13 ? A 4 ? 1 A G 13 1_555 A C 4 1_555 A A 14 1_555 A U 3 1_555 0.073 -1.705 3.165 -2.705 2.824 32.731 -3.459 -0.564 2.996 4.988 4.778 32.957 13 AA_G13A14:U3C4_AA A 13 ? A 4 ? A 14 ? A 3 ? 1 A A 14 1_555 A U 3 1_555 A G 15 1_555 A C 2 1_555 0.298 -1.183 3.379 4.456 6.720 29.946 -3.511 0.303 3.060 12.717 -8.433 30.988 14 AA_A14G15:C2U3_AA A 14 ? A 3 ? A 15 ? A 2 ? 1 A G 15 1_555 A C 2 1_555 C A 1 1_555 C U 16 1_555 -0.499 -3.515 2.829 13.411 14.539 99.504 -2.458 0.489 2.379 9.458 -8.724 100.938 15 AC_G15A1:U16C2_CA A 15 ? A 2 ? C 1 ? C 16 ? 1 C A 1 1_555 C U 16 1_555 C C 2 1_555 C G 15 1_555 0.756 -1.039 3.102 -0.953 14.468 33.624 -3.427 -1.323 2.444 23.689 1.561 36.533 16 CC_A1C2:G15U16_CC C 1 ? C 16 ? C 2 ? C 15 ? 1 C C 2 1_555 C G 15 1_555 C U 3 1_555 C A 14 1_555 0.138 -1.416 3.136 -0.428 4.880 27.285 -4.042 -0.384 2.842 10.241 0.898 27.713 17 CC_C2U3:A14G15_CC C 2 ? C 15 ? C 3 ? C 14 ? 1 C U 3 1_555 C A 14 1_555 C C 4 1_555 C G 13 1_555 -0.073 -1.833 3.109 3.055 4.505 27.946 -4.663 0.783 2.762 9.218 -6.251 28.460 18 CC_U3C4:G13A14_CC C 3 ? C 14 ? C 4 ? C 13 ? 1 C C 4 1_555 C G 13 1_555 C G 5 1_555 C C 12 1_555 -0.498 -1.826 3.545 -0.802 13.538 31.052 -5.273 0.731 2.561 23.910 1.416 33.818 19 CC_C4G5:C12G13_CC C 4 ? C 13 ? C 5 ? C 12 ? 1 C G 5 1_555 C C 12 1_555 C C 34 1_555 C G 11 1_555 -1.740 -0.697 3.118 3.707 -1.703 49.504 -0.713 2.328 3.009 -2.029 -4.419 49.661 20 CC_G5C34:G11C12_CC C 5 ? C 12 ? C 34 ? C 11 ? 1 C C 34 1_555 C G 11 1_555 C U 35 1_555 C A 10 1_555 -0.447 -1.957 3.630 -4.227 17.124 26.754 -6.519 0.081 2.079 32.859 8.111 31.956 21 CC_C34U35:A10G11_CC C 34 ? C 11 ? C 35 ? C 10 ? 1 C U 35 1_555 C A 10 1_555 C C 36 1_555 C G 9 1_555 -0.482 -1.477 3.500 -0.751 13.199 37.450 -3.722 0.624 2.849 19.816 1.128 39.636 22 CC_U35C36:G9A10_CC C 35 ? C 10 ? C 36 ? C 9 ? 1 C C 36 1_555 C G 9 1_555 C A 37 1_555 C U 8 1_555 -0.269 -1.314 2.818 -1.895 19.013 32.689 -3.912 0.228 1.822 30.731 3.063 37.731 23 CC_C36A37:U8G9_CC C 36 ? C 9 ? C 37 ? C 8 ? 1 C A 37 1_555 C U 8 1_555 C A 38 1_555 C U 7 1_555 0.838 -1.382 3.216 4.753 14.998 29.855 -4.611 -0.742 2.375 26.889 -8.521 33.663 24 CC_A37A38:U7U8_CC C 37 ? C 8 ? C 38 ? C 7 ? 1 C A 38 1_555 C U 7 1_555 C A 39 1_555 C U 6 1_555 1.096 -2.180 3.325 5.047 7.895 30.768 -5.300 -1.110 2.832 14.464 -9.247 32.130 25 CC_A38A39:U6U7_CC C 38 ? C 7 ? C 39 ? C 6 ? 1 C A 39 1_555 C U 6 1_555 C C 41 1_555 C G 33 1_555 -1.530 -3.062 2.862 5.393 10.454 66.023 -3.101 1.555 2.294 9.515 -4.909 66.946 26 CC_A39C41:G33U6_CC C 39 ? C 6 ? C 41 ? C 33 ? 1 C C 41 1_555 C G 33 1_555 C G 42 1_555 C G 40 1_555 4.720 -1.255 2.065 0.139 2.712 22.158 -3.862 -12.159 1.928 7.024 -0.359 22.322 27 CC_C41G42:G40G33_CC C 41 ? C 33 ? C 42 ? C 40 ? 1 C G 42 1_555 C G 40 1_555 C G 43 1_555 D C 9 1_555 1.418 1.013 5.672 -16.043 3.594 72.035 0.649 -2.056 5.341 3.018 13.469 73.639 28 CC_G42G43:C9G40_DC C 42 ? C 40 ? C 43 ? D 9 ? 1 C G 43 1_555 D C 9 1_555 C A 44 1_555 D U 8 1_555 0.006 -2.105 3.276 -0.101 8.617 36.971 -4.264 -0.022 2.735 13.367 0.157 37.928 29 CC_G43A44:U8C9_DD C 43 ? D 9 ? C 44 ? D 8 ? 1 C A 44 1_555 D U 8 1_555 C G 45 1_555 D C 7 1_555 0.076 -1.679 3.121 2.050 5.812 31.043 -4.057 0.205 2.768 10.726 -3.783 31.634 30 CC_A44G45:C7U8_DD C 44 ? D 8 ? C 45 ? D 7 ? 1 C G 45 1_555 D C 7 1_555 C A 46 1_555 D U 6 1_555 0.032 -1.546 3.179 0.123 6.180 33.623 -3.540 -0.037 2.858 10.573 -0.211 34.170 31 CC_G45A46:U6C7_DD C 45 ? D 7 ? C 46 ? D 6 ? 1 C A 46 1_555 D U 6 1_555 C G 47 1_555 D C 5 1_555 0.799 -2.250 3.292 4.441 8.981 27.038 -6.368 -0.695 2.527 18.425 -9.111 28.802 32 CC_A46G47:C5U6_DD C 46 ? D 6 ? C 47 ? D 5 ? 1 C G 47 1_555 D C 5 1_555 C C 48 1_555 D G 4 1_555 1.115 -1.870 2.988 3.792 1.005 28.652 -3.952 -1.455 3.041 2.019 -7.617 28.914 33 CC_G47C48:G4C5_DD C 47 ? D 5 ? C 48 ? D 4 ? 1 C C 48 1_555 D G 4 1_555 C A 49 1_555 D U 3 1_555 0.297 -1.619 3.020 5.511 7.760 31.290 -4.053 0.307 2.569 13.987 -9.934 32.671 34 CC_C48A49:U3G4_DD C 48 ? D 4 ? C 49 ? D 3 ? 1 C A 49 1_555 D U 3 1_555 C G 50 1_555 D C 2 1_555 -0.039 -1.704 3.234 3.560 9.140 27.745 -5.139 0.771 2.532 18.348 -7.146 29.396 35 CC_A49G50:C2U3_DD C 49 ? D 3 ? C 50 ? D 2 ? 1 A G 43 1_555 B C 9 1_555 A A 44 1_555 B U 8 1_555 -0.281 -2.020 3.231 -1.906 4.811 32.887 -4.286 0.189 2.925 8.433 3.340 33.280 36 AA_G43A44:U8C9_BB A 43 ? B 9 ? A 44 ? B 8 ? 1 A A 44 1_555 B U 8 1_555 A G 45 1_555 B C 7 1_555 0.050 -1.967 3.017 -1.288 3.749 28.597 -4.684 -0.353 2.737 7.544 2.592 28.865 37 AA_A44G45:C7U8_BB A 44 ? B 8 ? A 45 ? B 7 ? 1 A G 45 1_555 B C 7 1_555 A A 46 1_555 B U 6 1_555 0.597 -1.598 3.424 4.381 4.741 36.466 -3.172 -0.336 3.245 7.504 -6.934 37.013 38 AA_G45A46:U6C7_BB A 45 ? B 7 ? A 46 ? B 6 ? 1 A A 46 1_555 B U 6 1_555 A G 47 1_555 B C 5 1_555 0.959 -2.198 3.334 5.210 15.785 27.802 -6.404 -0.914 1.978 29.725 -9.810 32.308 39 AA_A46G47:C5U6_BB A 46 ? B 6 ? A 47 ? B 5 ? 1 A G 47 1_555 B C 5 1_555 A C 48 1_555 B G 4 1_555 0.430 -1.905 3.032 2.654 6.101 27.999 -5.029 -0.346 2.596 12.390 -5.389 28.763 40 AA_G47C48:G4C5_BB A 47 ? B 5 ? A 48 ? B 4 ? 1 A C 48 1_555 B G 4 1_555 A A 49 1_555 B U 3 1_555 0.076 -1.541 2.927 -2.091 4.552 27.980 -4.036 -0.566 2.636 9.319 4.281 28.416 41 AA_C48A49:U3G4_BB A 48 ? B 4 ? A 49 ? B 3 ? 1 A A 49 1_555 B U 3 1_555 A G 50 1_555 B C 2 1_555 0.009 -1.486 3.545 8.975 13.052 33.920 -4.060 1.182 2.728 21.009 -14.447 37.338 42 AA_A49G50:C2U3_BB A 49 ? B 3 ? A 50 ? B 2 ? 1 C U 25 1_555 D A 15 1_555 C U 26 1_555 D A 14 1_555 -0.763 -0.709 2.710 -0.183 -1.892 35.207 -0.936 1.237 2.747 -3.125 0.303 35.256 43 CC_U25U26:A14A15_DD C 25 ? D 15 ? C 26 ? D 14 ? 1 C U 26 1_555 D A 14 1_555 C G 27 1_555 D C 13 1_555 0.081 -1.104 3.239 -5.109 5.491 34.018 -2.651 -0.885 2.987 9.247 8.603 34.811 44 CC_U26G27:C13A14_DD C 26 ? D 14 ? C 27 ? D 13 ? 1 C G 27 1_555 D C 13 1_555 C G 28 1_555 D C 12 1_555 0.589 -2.061 3.092 -0.357 6.353 21.405 -7.352 -1.636 2.377 16.635 0.936 22.320 45 CC_G27G28:C12C13_DD C 27 ? D 13 ? C 28 ? D 12 ? 1 C G 28 1_555 D C 12 1_555 C U 29 1_555 D U 11 1_555 0.514 -0.819 3.046 -1.917 2.631 48.644 -1.178 -0.758 2.980 3.190 2.324 48.746 46 CC_G28U29:U11C12_DD C 28 ? D 12 ? C 29 ? D 11 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of Dental and Craniofacial Research (NIH/NIDCR)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 6UEY _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.010890 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010890 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008101 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C MG N O P V # loop_