data_6VDN # _entry.id 6VDN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6VDN pdb_00006vdn 10.2210/pdb6vdn/pdb WWPDB D_1000246245 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6VDN _pdbx_database_status.recvd_initial_deposition_date 2019-12-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Timm, J.' 1 0000-0001-9750-3293 'Schiffer, C.A.' 2 0000-0003-2270-6613 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'apo HCV protease A156T' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Timm, J.' 1 0000-0001-9750-3293 primary 'Zephyr, J.' 2 ? primary 'Hou, S.' 3 ? primary 'Kurt Yilmaz, N.' 4 ? primary 'Schiffer, C.A.' 5 0000-0003-2270-6613 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6VDN _cell.details ? _cell.formula_units_Z ? _cell.length_a 54.111 _cell.length_a_esd ? _cell.length_b 58.741 _cell.length_b_esd ? _cell.length_c 60.376 _cell.length_c_esd ? _cell.volume 191907.184 _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VDN _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Non-structural protein 4A, Serine protease NS3' 21549.420 1 3.4.22.-,3.4.21.98,3.6.1.15,3.6.4.13,2.7.7.48 'C1679S, V1686I, V1687N, L1039E, L1040E, I1043Q, I1044E, L1047Q, A1066T, C1073S, C1078L, I1098T, Q1106K, P1112Q, A1182T, N1200S' ? ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ? 5 water nat water 18.015 89 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMASMKKKGSVVIVGRINLSGDTAYAQQTRGEEGCQETSQTGRDKNQVEGEVQIVSTATQTFLATSINGVLWTVYHGA GTRTIASPKGPVTQMYTNVDKDLVGWQAPQGSRSLTPCTCGSSDLYLVTRHADVIPVRRRGDSRGSLLSPRPISYLKGSS GGPLLCPAGHAVGIFRTAVCTRGVAKAVDFIPVESLETTMRSP ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMASMKKKGSVVIVGRINLSGDTAYAQQTRGEEGCQETSQTGRDKNQVEGEVQIVSTATQTFLATSINGVLWTVYHGA GTRTIASPKGPVTQMYTNVDKDLVGWQAPQGSRSLTPCTCGSSDLYLVTRHADVIPVRRRGDSRGSLLSPRPISYLKGSS GGPLLCPAGHAVGIFRTAVCTRGVAKAVDFIPVESLETTMRSP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 ALA n 1 6 SER n 1 7 MET n 1 8 LYS n 1 9 LYS n 1 10 LYS n 1 11 GLY n 1 12 SER n 1 13 VAL n 1 14 VAL n 1 15 ILE n 1 16 VAL n 1 17 GLY n 1 18 ARG n 1 19 ILE n 1 20 ASN n 1 21 LEU n 1 22 SER n 1 23 GLY n 1 24 ASP n 1 25 THR n 1 26 ALA n 1 27 TYR n 1 28 ALA n 1 29 GLN n 1 30 GLN n 1 31 THR n 1 32 ARG n 1 33 GLY n 1 34 GLU n 1 35 GLU n 1 36 GLY n 1 37 CYS n 1 38 GLN n 1 39 GLU n 1 40 THR n 1 41 SER n 1 42 GLN n 1 43 THR n 1 44 GLY n 1 45 ARG n 1 46 ASP n 1 47 LYS n 1 48 ASN n 1 49 GLN n 1 50 VAL n 1 51 GLU n 1 52 GLY n 1 53 GLU n 1 54 VAL n 1 55 GLN n 1 56 ILE n 1 57 VAL n 1 58 SER n 1 59 THR n 1 60 ALA n 1 61 THR n 1 62 GLN n 1 63 THR n 1 64 PHE n 1 65 LEU n 1 66 ALA n 1 67 THR n 1 68 SER n 1 69 ILE n 1 70 ASN n 1 71 GLY n 1 72 VAL n 1 73 LEU n 1 74 TRP n 1 75 THR n 1 76 VAL n 1 77 TYR n 1 78 HIS n 1 79 GLY n 1 80 ALA n 1 81 GLY n 1 82 THR n 1 83 ARG n 1 84 THR n 1 85 ILE n 1 86 ALA n 1 87 SER n 1 88 PRO n 1 89 LYS n 1 90 GLY n 1 91 PRO n 1 92 VAL n 1 93 THR n 1 94 GLN n 1 95 MET n 1 96 TYR n 1 97 THR n 1 98 ASN n 1 99 VAL n 1 100 ASP n 1 101 LYS n 1 102 ASP n 1 103 LEU n 1 104 VAL n 1 105 GLY n 1 106 TRP n 1 107 GLN n 1 108 ALA n 1 109 PRO n 1 110 GLN n 1 111 GLY n 1 112 SER n 1 113 ARG n 1 114 SER n 1 115 LEU n 1 116 THR n 1 117 PRO n 1 118 CYS n 1 119 THR n 1 120 CYS n 1 121 GLY n 1 122 SER n 1 123 SER n 1 124 ASP n 1 125 LEU n 1 126 TYR n 1 127 LEU n 1 128 VAL n 1 129 THR n 1 130 ARG n 1 131 HIS n 1 132 ALA n 1 133 ASP n 1 134 VAL n 1 135 ILE n 1 136 PRO n 1 137 VAL n 1 138 ARG n 1 139 ARG n 1 140 ARG n 1 141 GLY n 1 142 ASP n 1 143 SER n 1 144 ARG n 1 145 GLY n 1 146 SER n 1 147 LEU n 1 148 LEU n 1 149 SER n 1 150 PRO n 1 151 ARG n 1 152 PRO n 1 153 ILE n 1 154 SER n 1 155 TYR n 1 156 LEU n 1 157 LYS n 1 158 GLY n 1 159 SER n 1 160 SER n 1 161 GLY n 1 162 GLY n 1 163 PRO n 1 164 LEU n 1 165 LEU n 1 166 CYS n 1 167 PRO n 1 168 ALA n 1 169 GLY n 1 170 HIS n 1 171 ALA n 1 172 VAL n 1 173 GLY n 1 174 ILE n 1 175 PHE n 1 176 ARG n 1 177 THR n 1 178 ALA n 1 179 VAL n 1 180 CYS n 1 181 THR n 1 182 ARG n 1 183 GLY n 1 184 VAL n 1 185 ALA n 1 186 LYS n 1 187 ALA n 1 188 VAL n 1 189 ASP n 1 190 PHE n 1 191 ILE n 1 192 PRO n 1 193 VAL n 1 194 GLU n 1 195 SER n 1 196 LEU n 1 197 GLU n 1 198 THR n 1 199 THR n 1 200 MET n 1 201 ARG n 1 202 SER n 1 203 PRO n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 24 HCV ? ? ? 'isolate 1' ? ? ? ? 'Hepatitis C virus genotype 1a (isolate 1)' 11104 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 2 sample 'Biological sequence' 25 203 HCV ? ? ? 'isolate 1' ? ? ? ? 'Hepatitis C virus genotype 1a (isolate 1)' 11104 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP POLG_HCV1 P26664 ? 1 GCVVIVGRVVL 1678 2 UNP POLG_HCV1 P26664 ? 1 ;TAYAQQTRGLLGCIITSLTGRDKNQVEGEVQIVSTAAQTFLATCINGVCWTVYHGAGTRTIASPKGPVIQMYTNVDQDLV GWPAPQGSRSLTPCTCGSSDLYLVTRHADVIPVRRRGDSRGSLLSPRPISYLKGSSGGPLLCPAGHAVGIFRAAVCTRGV AKAVDFIPVENLETTMRSP ; 1030 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6VDN A 11 ? 21 ? P26664 1678 ? 1688 ? 990 1000 2 2 6VDN A 25 ? 203 ? P26664 1030 ? 1208 ? 1004 1182 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6VDN GLY A 1 ? UNP P26664 ? ? 'expression tag' 980 1 1 6VDN SER A 2 ? UNP P26664 ? ? 'expression tag' 981 2 1 6VDN HIS A 3 ? UNP P26664 ? ? 'expression tag' 982 3 1 6VDN MET A 4 ? UNP P26664 ? ? 'expression tag' 983 4 1 6VDN ALA A 5 ? UNP P26664 ? ? 'expression tag' 984 5 1 6VDN SER A 6 ? UNP P26664 ? ? 'expression tag' 985 6 1 6VDN MET A 7 ? UNP P26664 ? ? 'expression tag' 986 7 1 6VDN LYS A 8 ? UNP P26664 ? ? 'expression tag' 987 8 1 6VDN LYS A 9 ? UNP P26664 ? ? 'expression tag' 988 9 1 6VDN LYS A 10 ? UNP P26664 ? ? 'expression tag' 989 10 1 6VDN SER A 12 ? UNP P26664 CYS 1679 'engineered mutation' 991 11 1 6VDN ILE A 19 ? UNP P26664 VAL 1686 'engineered mutation' 998 12 1 6VDN ASN A 20 ? UNP P26664 VAL 1687 'engineered mutation' 999 13 1 6VDN SER A 22 ? UNP P26664 ? ? linker 1001 14 1 6VDN GLY A 23 ? UNP P26664 ? ? linker 1002 15 1 6VDN ASP A 24 ? UNP P26664 ? ? linker 1003 16 2 6VDN GLU A 34 ? UNP P26664 LEU 1039 'engineered mutation' 1013 17 2 6VDN GLU A 35 ? UNP P26664 LEU 1040 'engineered mutation' 1014 18 2 6VDN GLN A 38 ? UNP P26664 ILE 1043 'engineered mutation' 1017 19 2 6VDN GLU A 39 ? UNP P26664 ILE 1044 'engineered mutation' 1018 20 2 6VDN GLN A 42 ? UNP P26664 LEU 1047 'engineered mutation' 1021 21 2 6VDN THR A 61 ? UNP P26664 ALA 1066 'engineered mutation' 1040 22 2 6VDN SER A 68 ? UNP P26664 CYS 1073 'engineered mutation' 1047 23 2 6VDN LEU A 73 ? UNP P26664 CYS 1078 'engineered mutation' 1052 24 2 6VDN THR A 93 ? UNP P26664 ILE 1098 'engineered mutation' 1072 25 2 6VDN LYS A 101 ? UNP P26664 GLN 1106 'engineered mutation' 1080 26 2 6VDN GLN A 107 ? UNP P26664 PRO 1112 'engineered mutation' 1086 27 2 6VDN THR A 177 ? UNP P26664 ALA 1182 'engineered mutation' 1156 28 2 6VDN SER A 195 ? UNP P26664 ASN 1200 'engineered mutation' 1174 29 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6VDN _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.23 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 44.75 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 278 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.1M MES pH 6.5 2% Ammonium sulfate 20-25% PEG 3350 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RIGAKU SATURN 944' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-11-21 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type RIGAKU _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate 30.83 _reflns.entry_id 6VDN _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.149 _reflns.d_resolution_low 24.69 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 10927 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.63 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 22.69 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.149 _reflns_shell.d_res_low 2.226 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1048 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.966 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 35.66 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6VDN _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.15 _refine.ls_d_res_low 24.69 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 10924 _refine.ls_number_reflns_R_free 547 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.64 _refine.ls_percent_reflns_R_free 5.01 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2008 _refine.ls_R_factor_R_free 0.2340 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1990 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 6p6m _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 26.0174 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2033 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.15 _refine_hist.d_res_low 24.69 _refine_hist.number_atoms_solvent 89 _refine_hist.number_atoms_total 1540 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1424 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 27 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0072 ? 1482 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.7030 ? 2025 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0476 ? 239 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0046 ? 261 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 9.5624 ? 1156 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.15 2.36 . . 134 2521 98.66 . . . 0.2826 . 0.2037 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.36 2.71 . . 137 2557 99.96 . . . 0.2404 . 0.2039 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.71 3.41 . . 130 2592 99.96 . . . 0.2182 . 0.1972 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.41 24.69 . . 146 2707 99.93 . . . 0.2283 . 0.1975 . . . . . . . . . . . # _struct.entry_id 6VDN _struct.title 'HCV NS3/4A protease A156T mutant' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6VDN _struct_keywords.text 'HCV protease, NS34A protease, VIRAL PROTEIN, Hydrolase' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN, Hydrolase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 HIS A 3 ? MET A 7 ? HIS A 982 MET A 986 5 ? 5 HELX_P HELX_P2 AA2 GLY A 33 ? GLY A 44 ? GLY A 1012 GLY A 1023 1 ? 12 HELX_P HELX_P3 AA3 VAL A 76 ? GLY A 81 ? VAL A 1055 GLY A 1060 1 ? 6 HELX_P HELX_P4 AA4 VAL A 99 ? ASP A 102 ? VAL A 1078 ASP A 1081 5 ? 4 HELX_P HELX_P5 AA5 SER A 154 ? LYS A 157 ? SER A 1133 LYS A 1136 5 ? 4 HELX_P HELX_P6 AA6 VAL A 193 ? ARG A 201 ? VAL A 1172 ARG A 1180 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 118 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 1097 A ZN 1201 1_555 ? ? ? ? ? ? ? 2.246 ? ? metalc2 metalc ? ? A CYS 120 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 1099 A ZN 1201 1_555 ? ? ? ? ? ? ? 2.507 ? ? metalc3 metalc ? ? A CYS 166 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 1145 A ZN 1201 1_555 ? ? ? ? ? ? ? 2.589 ? ? metalc4 metalc ? ? A HIS 170 ND1 ? ? ? 1_555 B ZN . ZN ? ? A HIS 1149 A ZN 1201 1_555 ? ? ? ? ? ? ? 2.272 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 27 ? GLN A 30 ? TYR A 1006 GLN A 1009 AA1 2 VAL A 14 ? ASN A 20 ? VAL A 993 ASN A 999 AA1 3 VAL A 54 ? SER A 58 ? VAL A 1033 SER A 1037 AA1 4 THR A 63 ? ILE A 69 ? THR A 1042 ILE A 1048 AA1 5 VAL A 72 ? THR A 75 ? VAL A 1051 THR A 1054 AA1 6 LEU A 103 ? GLN A 107 ? LEU A 1082 GLN A 1086 AA1 7 TYR A 96 ? ASN A 98 ? TYR A 1075 ASN A 1077 AA2 1 ASP A 124 ? VAL A 128 ? ASP A 1103 VAL A 1107 AA2 2 VAL A 134 ? ARG A 139 ? VAL A 1113 ARG A 1118 AA2 3 ARG A 144 ? PRO A 152 ? ARG A 1123 PRO A 1131 AA2 4 VAL A 184 ? PRO A 192 ? VAL A 1163 PRO A 1171 AA2 5 ALA A 171 ? THR A 181 ? ALA A 1150 THR A 1160 AA2 6 PRO A 163 ? LEU A 165 ? PRO A 1142 LEU A 1144 AA2 7 ASP A 124 ? VAL A 128 ? ASP A 1103 VAL A 1107 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O TYR A 27 ? O TYR A 1006 N ASN A 20 ? N ASN A 999 AA1 2 3 N VAL A 16 ? N VAL A 995 O ILE A 56 ? O ILE A 1035 AA1 3 4 N GLN A 55 ? N GLN A 1034 O ALA A 66 ? O ALA A 1045 AA1 4 5 N THR A 67 ? N THR A 1046 O TRP A 74 ? O TRP A 1053 AA1 5 6 N LEU A 73 ? N LEU A 1052 O TRP A 106 ? O TRP A 1085 AA1 6 7 O LEU A 103 ? O LEU A 1082 N ASN A 98 ? N ASN A 1077 AA2 1 2 N LEU A 125 ? N LEU A 1104 O VAL A 137 ? O VAL A 1116 AA2 2 3 N ARG A 138 ? N ARG A 1117 O SER A 146 ? O SER A 1125 AA2 3 4 N GLY A 145 ? N GLY A 1124 O VAL A 188 ? O VAL A 1167 AA2 4 5 O ILE A 191 ? O ILE A 1170 N ILE A 174 ? N ILE A 1153 AA2 5 6 O VAL A 172 ? O VAL A 1151 N LEU A 164 ? N LEU A 1143 AA2 6 7 O LEU A 165 ? O LEU A 1144 N TYR A 126 ? N TYR A 1105 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 1201 ? 4 'binding site for residue ZN A 1201' AC2 Software A GOL 1202 ? 4 'binding site for residue GOL A 1202' AC3 Software A SO4 1203 ? 8 'binding site for residue SO4 A 1203' AC4 Software A SO4 1204 ? 4 'binding site for residue SO4 A 1204' AC5 Software A SO4 1205 ? 3 'binding site for residue SO4 A 1205' AC6 Software A SO4 1206 ? 3 'binding site for residue SO4 A 1206' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 118 ? CYS A 1097 . ? 1_555 ? 2 AC1 4 CYS A 120 ? CYS A 1099 . ? 1_555 ? 3 AC1 4 CYS A 166 ? CYS A 1145 . ? 1_555 ? 4 AC1 4 HIS A 170 ? HIS A 1149 . ? 1_555 ? 5 AC2 4 ARG A 18 ? ARG A 997 . ? 1_555 ? 6 AC2 4 THR A 31 ? THR A 1010 . ? 1_555 ? 7 AC2 4 ASN A 48 ? ASN A 1027 . ? 1_555 ? 8 AC2 4 HOH H . ? HOH A 1310 . ? 1_555 ? 9 AC3 8 HIS A 78 ? HIS A 1057 . ? 1_555 ? 10 AC3 8 LEU A 156 ? LEU A 1135 . ? 1_555 ? 11 AC3 8 LYS A 157 ? LYS A 1136 . ? 1_555 ? 12 AC3 8 GLY A 158 ? GLY A 1137 . ? 1_555 ? 13 AC3 8 SER A 159 ? SER A 1138 . ? 1_555 ? 14 AC3 8 SER A 160 ? SER A 1139 . ? 1_555 ? 15 AC3 8 HOH H . ? HOH A 1328 . ? 1_555 ? 16 AC3 8 HOH H . ? HOH A 1349 . ? 1_555 ? 17 AC4 4 TYR A 77 ? TYR A 1056 . ? 1_555 ? 18 AC4 4 HIS A 78 ? HIS A 1057 . ? 1_555 ? 19 AC4 4 VAL A 99 ? VAL A 1078 . ? 1_555 ? 20 AC4 4 ASP A 102 ? ASP A 1081 . ? 1_555 ? 21 AC5 3 GLY A 11 ? GLY A 990 . ? 1_555 ? 22 AC5 3 ALA A 60 ? ALA A 1039 . ? 1_555 ? 23 AC5 3 ARG A 83 ? ARG A 1062 . ? 1_555 ? 24 AC6 3 GLN A 29 ? GLN A 1008 . ? 3_555 ? 25 AC6 3 TYR A 77 ? TYR A 1056 . ? 1_555 ? 26 AC6 3 HOH H . ? HOH A 1352 . ? 1_555 ? # _atom_sites.entry_id 6VDN _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.018481 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017024 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016563 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.51345 0.48472 ? ? 24.73122 6.32584 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? ZN ? ? 24.64596 5.25405 ? ? 2.14387 29.76375 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 980 ? ? ? A . n A 1 2 SER 2 981 ? ? ? A . n A 1 3 HIS 3 982 982 HIS HIS A . n A 1 4 MET 4 983 983 MET MET A . n A 1 5 ALA 5 984 984 ALA ALA A . n A 1 6 SER 6 985 985 SER SER A . n A 1 7 MET 7 986 986 MET MET A . n A 1 8 LYS 8 987 987 LYS LYS A . n A 1 9 LYS 9 988 988 LYS LYS A . n A 1 10 LYS 10 989 989 LYS LYS A . n A 1 11 GLY 11 990 990 GLY GLY A . n A 1 12 SER 12 991 991 SER SER A . n A 1 13 VAL 13 992 992 VAL VAL A . n A 1 14 VAL 14 993 993 VAL VAL A . n A 1 15 ILE 15 994 994 ILE ILE A . n A 1 16 VAL 16 995 995 VAL VAL A . n A 1 17 GLY 17 996 996 GLY GLY A . n A 1 18 ARG 18 997 997 ARG ARG A . n A 1 19 ILE 19 998 998 ILE ILE A . n A 1 20 ASN 20 999 999 ASN ASN A . n A 1 21 LEU 21 1000 1000 LEU LEU A . n A 1 22 SER 22 1001 1001 SER SER A . n A 1 23 GLY 23 1002 1002 GLY GLY A . n A 1 24 ASP 24 1003 1003 ASP ASP A . n A 1 25 THR 25 1004 1004 THR THR A . n A 1 26 ALA 26 1005 1005 ALA ALA A . n A 1 27 TYR 27 1006 1006 TYR TYR A . n A 1 28 ALA 28 1007 1007 ALA ALA A . n A 1 29 GLN 29 1008 1008 GLN GLN A . n A 1 30 GLN 30 1009 1009 GLN GLN A . n A 1 31 THR 31 1010 1010 THR THR A . n A 1 32 ARG 32 1011 1011 ARG ARG A . n A 1 33 GLY 33 1012 1012 GLY GLY A . n A 1 34 GLU 34 1013 1013 GLU GLU A . n A 1 35 GLU 35 1014 1014 GLU GLU A . n A 1 36 GLY 36 1015 1015 GLY GLY A . n A 1 37 CYS 37 1016 1016 CYS CYS A . n A 1 38 GLN 38 1017 1017 GLN GLN A . n A 1 39 GLU 39 1018 1018 GLU GLU A . n A 1 40 THR 40 1019 1019 THR THR A . n A 1 41 SER 41 1020 1020 SER SER A . n A 1 42 GLN 42 1021 1021 GLN GLN A . n A 1 43 THR 43 1022 1022 THR THR A . n A 1 44 GLY 44 1023 1023 GLY GLY A . n A 1 45 ARG 45 1024 1024 ARG ARG A . n A 1 46 ASP 46 1025 1025 ASP ASP A . n A 1 47 LYS 47 1026 1026 LYS LYS A . n A 1 48 ASN 48 1027 1027 ASN ASN A . n A 1 49 GLN 49 1028 1028 GLN GLN A . n A 1 50 VAL 50 1029 1029 VAL VAL A . n A 1 51 GLU 51 1030 1030 GLU GLU A . n A 1 52 GLY 52 1031 1031 GLY GLY A . n A 1 53 GLU 53 1032 1032 GLU GLU A . n A 1 54 VAL 54 1033 1033 VAL VAL A . n A 1 55 GLN 55 1034 1034 GLN GLN A . n A 1 56 ILE 56 1035 1035 ILE ILE A . n A 1 57 VAL 57 1036 1036 VAL VAL A . n A 1 58 SER 58 1037 1037 SER SER A . n A 1 59 THR 59 1038 1038 THR THR A . n A 1 60 ALA 60 1039 1039 ALA ALA A . n A 1 61 THR 61 1040 1040 THR THR A . n A 1 62 GLN 62 1041 1041 GLN GLN A . n A 1 63 THR 63 1042 1042 THR THR A . n A 1 64 PHE 64 1043 1043 PHE PHE A . n A 1 65 LEU 65 1044 1044 LEU LEU A . n A 1 66 ALA 66 1045 1045 ALA ALA A . n A 1 67 THR 67 1046 1046 THR THR A . n A 1 68 SER 68 1047 1047 SER SER A . n A 1 69 ILE 69 1048 1048 ILE ILE A . n A 1 70 ASN 70 1049 1049 ASN ASN A . n A 1 71 GLY 71 1050 1050 GLY GLY A . n A 1 72 VAL 72 1051 1051 VAL VAL A . n A 1 73 LEU 73 1052 1052 LEU LEU A . n A 1 74 TRP 74 1053 1053 TRP TRP A . n A 1 75 THR 75 1054 1054 THR THR A . n A 1 76 VAL 76 1055 1055 VAL VAL A . n A 1 77 TYR 77 1056 1056 TYR TYR A . n A 1 78 HIS 78 1057 1057 HIS HIS A . n A 1 79 GLY 79 1058 1058 GLY GLY A . n A 1 80 ALA 80 1059 1059 ALA ALA A . n A 1 81 GLY 81 1060 1060 GLY GLY A . n A 1 82 THR 82 1061 1061 THR THR A . n A 1 83 ARG 83 1062 1062 ARG ARG A . n A 1 84 THR 84 1063 1063 THR THR A . n A 1 85 ILE 85 1064 1064 ILE ILE A . n A 1 86 ALA 86 1065 1065 ALA ALA A . n A 1 87 SER 87 1066 1066 SER SER A . n A 1 88 PRO 88 1067 1067 PRO PRO A . n A 1 89 LYS 89 1068 1068 LYS LYS A . n A 1 90 GLY 90 1069 1069 GLY GLY A . n A 1 91 PRO 91 1070 1070 PRO PRO A . n A 1 92 VAL 92 1071 1071 VAL VAL A . n A 1 93 THR 93 1072 1072 THR THR A . n A 1 94 GLN 94 1073 1073 GLN GLN A . n A 1 95 MET 95 1074 1074 MET MET A . n A 1 96 TYR 96 1075 1075 TYR TYR A . n A 1 97 THR 97 1076 1076 THR THR A . n A 1 98 ASN 98 1077 1077 ASN ASN A . n A 1 99 VAL 99 1078 1078 VAL VAL A . n A 1 100 ASP 100 1079 1079 ASP ASP A . n A 1 101 LYS 101 1080 1080 LYS LYS A . n A 1 102 ASP 102 1081 1081 ASP ASP A . n A 1 103 LEU 103 1082 1082 LEU LEU A . n A 1 104 VAL 104 1083 1083 VAL VAL A . n A 1 105 GLY 105 1084 1084 GLY GLY A . n A 1 106 TRP 106 1085 1085 TRP TRP A . n A 1 107 GLN 107 1086 1086 GLN GLN A . n A 1 108 ALA 108 1087 1087 ALA ALA A . n A 1 109 PRO 109 1088 1088 PRO PRO A . n A 1 110 GLN 110 1089 1089 GLN GLN A . n A 1 111 GLY 111 1090 1090 GLY GLY A . n A 1 112 SER 112 1091 1091 SER SER A . n A 1 113 ARG 113 1092 1092 ARG ARG A . n A 1 114 SER 114 1093 1093 SER SER A . n A 1 115 LEU 115 1094 1094 LEU LEU A . n A 1 116 THR 116 1095 1095 THR THR A . n A 1 117 PRO 117 1096 1096 PRO PRO A . n A 1 118 CYS 118 1097 1097 CYS CYS A . n A 1 119 THR 119 1098 1098 THR THR A . n A 1 120 CYS 120 1099 1099 CYS CYS A . n A 1 121 GLY 121 1100 1100 GLY GLY A . n A 1 122 SER 122 1101 1101 SER SER A . n A 1 123 SER 123 1102 1102 SER SER A . n A 1 124 ASP 124 1103 1103 ASP ASP A . n A 1 125 LEU 125 1104 1104 LEU LEU A . n A 1 126 TYR 126 1105 1105 TYR TYR A . n A 1 127 LEU 127 1106 1106 LEU LEU A . n A 1 128 VAL 128 1107 1107 VAL VAL A . n A 1 129 THR 129 1108 1108 THR THR A . n A 1 130 ARG 130 1109 1109 ARG ARG A . n A 1 131 HIS 131 1110 1110 HIS HIS A . n A 1 132 ALA 132 1111 1111 ALA ALA A . n A 1 133 ASP 133 1112 1112 ASP ASP A . n A 1 134 VAL 134 1113 1113 VAL VAL A . n A 1 135 ILE 135 1114 1114 ILE ILE A . n A 1 136 PRO 136 1115 1115 PRO PRO A . n A 1 137 VAL 137 1116 1116 VAL VAL A . n A 1 138 ARG 138 1117 1117 ARG ARG A . n A 1 139 ARG 139 1118 1118 ARG ARG A . n A 1 140 ARG 140 1119 1119 ARG ARG A . n A 1 141 GLY 141 1120 1120 GLY GLY A . n A 1 142 ASP 142 1121 1121 ASP ASP A . n A 1 143 SER 143 1122 1122 SER SER A . n A 1 144 ARG 144 1123 1123 ARG ARG A . n A 1 145 GLY 145 1124 1124 GLY GLY A . n A 1 146 SER 146 1125 1125 SER SER A . n A 1 147 LEU 147 1126 1126 LEU LEU A . n A 1 148 LEU 148 1127 1127 LEU LEU A . n A 1 149 SER 149 1128 1128 SER SER A . n A 1 150 PRO 150 1129 1129 PRO PRO A . n A 1 151 ARG 151 1130 1130 ARG ARG A . n A 1 152 PRO 152 1131 1131 PRO PRO A . n A 1 153 ILE 153 1132 1132 ILE ILE A . n A 1 154 SER 154 1133 1133 SER SER A . n A 1 155 TYR 155 1134 1134 TYR TYR A . n A 1 156 LEU 156 1135 1135 LEU LEU A . n A 1 157 LYS 157 1136 1136 LYS LYS A . n A 1 158 GLY 158 1137 1137 GLY GLY A . n A 1 159 SER 159 1138 1138 SER SER A . n A 1 160 SER 160 1139 1139 SER SER A . n A 1 161 GLY 161 1140 1140 GLY GLY A . n A 1 162 GLY 162 1141 1141 GLY GLY A . n A 1 163 PRO 163 1142 1142 PRO PRO A . n A 1 164 LEU 164 1143 1143 LEU LEU A . n A 1 165 LEU 165 1144 1144 LEU LEU A . n A 1 166 CYS 166 1145 1145 CYS CYS A . n A 1 167 PRO 167 1146 1146 PRO PRO A . n A 1 168 ALA 168 1147 1147 ALA ALA A . n A 1 169 GLY 169 1148 1148 GLY GLY A . n A 1 170 HIS 170 1149 1149 HIS HIS A . n A 1 171 ALA 171 1150 1150 ALA ALA A . n A 1 172 VAL 172 1151 1151 VAL VAL A . n A 1 173 GLY 173 1152 1152 GLY GLY A . n A 1 174 ILE 174 1153 1153 ILE ILE A . n A 1 175 PHE 175 1154 1154 PHE PHE A . n A 1 176 ARG 176 1155 1155 ARG ARG A . n A 1 177 THR 177 1156 1156 THR THR A . n A 1 178 ALA 178 1157 1157 ALA ALA A . n A 1 179 VAL 179 1158 1158 VAL VAL A . n A 1 180 CYS 180 1159 1159 CYS CYS A . n A 1 181 THR 181 1160 1160 THR THR A . n A 1 182 ARG 182 1161 1161 ARG ARG A . n A 1 183 GLY 183 1162 1162 GLY GLY A . n A 1 184 VAL 184 1163 1163 VAL VAL A . n A 1 185 ALA 185 1164 1164 ALA ALA A . n A 1 186 LYS 186 1165 1165 LYS LYS A . n A 1 187 ALA 187 1166 1166 ALA ALA A . n A 1 188 VAL 188 1167 1167 VAL VAL A . n A 1 189 ASP 189 1168 1168 ASP ASP A . n A 1 190 PHE 190 1169 1169 PHE PHE A . n A 1 191 ILE 191 1170 1170 ILE ILE A . n A 1 192 PRO 192 1171 1171 PRO PRO A . n A 1 193 VAL 193 1172 1172 VAL VAL A . n A 1 194 GLU 194 1173 1173 GLU GLU A . n A 1 195 SER 195 1174 1174 SER SER A . n A 1 196 LEU 196 1175 1175 LEU LEU A . n A 1 197 GLU 197 1176 1176 GLU GLU A . n A 1 198 THR 198 1177 1177 THR THR A . n A 1 199 THR 199 1178 1178 THR THR A . n A 1 200 MET 200 1179 1179 MET MET A . n A 1 201 ARG 201 1180 1180 ARG ARG A . n A 1 202 SER 202 1181 ? ? ? A . n A 1 203 PRO 203 1182 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 1201 1201 ZN ZN A . C 3 GOL 1 1202 1301 GOL GOL A . D 4 SO4 1 1203 1 SO4 SO4 A . E 4 SO4 1 1204 2 SO4 SO4 A . F 4 SO4 1 1205 3 SO4 SO4 A . G 4 SO4 1 1206 4 SO4 SO4 A . H 5 HOH 1 1301 17 HOH HOH A . H 5 HOH 2 1302 52 HOH HOH A . H 5 HOH 3 1303 70 HOH HOH A . H 5 HOH 4 1304 81 HOH HOH A . H 5 HOH 5 1305 3 HOH HOH A . H 5 HOH 6 1306 25 HOH HOH A . H 5 HOH 7 1307 41 HOH HOH A . H 5 HOH 8 1308 32 HOH HOH A . H 5 HOH 9 1309 33 HOH HOH A . H 5 HOH 10 1310 92 HOH HOH A . H 5 HOH 11 1311 11 HOH HOH A . H 5 HOH 12 1312 14 HOH HOH A . H 5 HOH 13 1313 5 HOH HOH A . H 5 HOH 14 1314 10 HOH HOH A . H 5 HOH 15 1315 38 HOH HOH A . H 5 HOH 16 1316 43 HOH HOH A . H 5 HOH 17 1317 29 HOH HOH A . H 5 HOH 18 1318 67 HOH HOH A . H 5 HOH 19 1319 15 HOH HOH A . H 5 HOH 20 1320 42 HOH HOH A . H 5 HOH 21 1321 84 HOH HOH A . H 5 HOH 22 1322 4 HOH HOH A . H 5 HOH 23 1323 2 HOH HOH A . H 5 HOH 24 1324 83 HOH HOH A . H 5 HOH 25 1325 13 HOH HOH A . H 5 HOH 26 1326 79 HOH HOH A . H 5 HOH 27 1327 6 HOH HOH A . H 5 HOH 28 1328 45 HOH HOH A . H 5 HOH 29 1329 36 HOH HOH A . H 5 HOH 30 1330 57 HOH HOH A . H 5 HOH 31 1331 8 HOH HOH A . H 5 HOH 32 1332 9 HOH HOH A . H 5 HOH 33 1333 40 HOH HOH A . H 5 HOH 34 1334 49 HOH HOH A . H 5 HOH 35 1335 12 HOH HOH A . H 5 HOH 36 1336 7 HOH HOH A . H 5 HOH 37 1337 62 HOH HOH A . H 5 HOH 38 1338 19 HOH HOH A . H 5 HOH 39 1339 61 HOH HOH A . H 5 HOH 40 1340 1 HOH HOH A . H 5 HOH 41 1341 68 HOH HOH A . H 5 HOH 42 1342 26 HOH HOH A . H 5 HOH 43 1343 22 HOH HOH A . H 5 HOH 44 1344 89 HOH HOH A . H 5 HOH 45 1345 16 HOH HOH A . H 5 HOH 46 1346 56 HOH HOH A . H 5 HOH 47 1347 66 HOH HOH A . H 5 HOH 48 1348 85 HOH HOH A . H 5 HOH 49 1349 44 HOH HOH A . H 5 HOH 50 1350 82 HOH HOH A . H 5 HOH 51 1351 77 HOH HOH A . H 5 HOH 52 1352 51 HOH HOH A . H 5 HOH 53 1353 48 HOH HOH A . H 5 HOH 54 1354 39 HOH HOH A . H 5 HOH 55 1355 71 HOH HOH A . H 5 HOH 56 1356 50 HOH HOH A . H 5 HOH 57 1357 54 HOH HOH A . H 5 HOH 58 1358 72 HOH HOH A . H 5 HOH 59 1359 88 HOH HOH A . H 5 HOH 60 1360 55 HOH HOH A . H 5 HOH 61 1361 53 HOH HOH A . H 5 HOH 62 1362 21 HOH HOH A . H 5 HOH 63 1363 37 HOH HOH A . H 5 HOH 64 1364 86 HOH HOH A . H 5 HOH 65 1365 64 HOH HOH A . H 5 HOH 66 1366 90 HOH HOH A . H 5 HOH 67 1367 28 HOH HOH A . H 5 HOH 68 1368 58 HOH HOH A . H 5 HOH 69 1369 75 HOH HOH A . H 5 HOH 70 1370 30 HOH HOH A . H 5 HOH 71 1371 20 HOH HOH A . H 5 HOH 72 1372 23 HOH HOH A . H 5 HOH 73 1373 80 HOH HOH A . H 5 HOH 74 1374 47 HOH HOH A . H 5 HOH 75 1375 74 HOH HOH A . H 5 HOH 76 1376 24 HOH HOH A . H 5 HOH 77 1377 60 HOH HOH A . H 5 HOH 78 1378 69 HOH HOH A . H 5 HOH 79 1379 35 HOH HOH A . H 5 HOH 80 1380 73 HOH HOH A . H 5 HOH 81 1381 63 HOH HOH A . H 5 HOH 82 1382 76 HOH HOH A . H 5 HOH 83 1383 91 HOH HOH A . H 5 HOH 84 1384 46 HOH HOH A . H 5 HOH 85 1385 87 HOH HOH A . H 5 HOH 86 1386 78 HOH HOH A . H 5 HOH 87 1387 65 HOH HOH A . H 5 HOH 88 1388 18 HOH HOH A . H 5 HOH 89 1389 27 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 118 ? A CYS 1097 ? 1_555 ZN ? B ZN . ? A ZN 1201 ? 1_555 SG ? A CYS 120 ? A CYS 1099 ? 1_555 105.9 ? 2 SG ? A CYS 118 ? A CYS 1097 ? 1_555 ZN ? B ZN . ? A ZN 1201 ? 1_555 SG ? A CYS 166 ? A CYS 1145 ? 1_555 122.4 ? 3 SG ? A CYS 120 ? A CYS 1099 ? 1_555 ZN ? B ZN . ? A ZN 1201 ? 1_555 SG ? A CYS 166 ? A CYS 1145 ? 1_555 117.1 ? 4 SG ? A CYS 118 ? A CYS 1097 ? 1_555 ZN ? B ZN . ? A ZN 1201 ? 1_555 ND1 ? A HIS 170 ? A HIS 1149 ? 1_555 125.4 ? 5 SG ? A CYS 120 ? A CYS 1099 ? 1_555 ZN ? B ZN . ? A ZN 1201 ? 1_555 ND1 ? A HIS 170 ? A HIS 1149 ? 1_555 93.8 ? 6 SG ? A CYS 166 ? A CYS 1145 ? 1_555 ZN ? B ZN . ? A ZN 1201 ? 1_555 ND1 ? A HIS 170 ? A HIS 1149 ? 1_555 89.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-12-30 2 'Structure model' 1 1 2023-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x+1/2,-y+1/2,-z 3 -x,y+1/2,-z+1/2 4 -x+1/2,-y,z+1/2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.15.2_3472 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_entry_details.entry_id 6VDN _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HH12 A ARG 1062 ? ? O2 A SO4 1205 ? ? 1.59 2 1 O A ALA 1005 ? ? O A HOH 1301 ? ? 2.06 3 1 O A HOH 1376 ? ? O A HOH 1379 ? ? 2.07 4 1 O A HOH 1330 ? ? O A HOH 1375 ? ? 2.09 5 1 O A HOH 1346 ? ? O A HOH 1360 ? ? 2.12 6 1 O A HOH 1371 ? ? O A HOH 1388 ? ? 2.12 7 1 O A HOH 1369 ? ? O A HOH 1382 ? ? 2.13 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 1038 ? ? -104.44 -168.06 2 1 PHE A 1043 ? ? -149.63 -158.77 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 987 ? CG ? A LYS 8 CG 2 1 Y 1 A LYS 987 ? CD ? A LYS 8 CD 3 1 Y 1 A LYS 987 ? CE ? A LYS 8 CE 4 1 Y 1 A LYS 987 ? NZ ? A LYS 8 NZ 5 1 Y 1 A LYS 989 ? CG ? A LYS 10 CG 6 1 Y 1 A LYS 989 ? CD ? A LYS 10 CD 7 1 Y 1 A LYS 989 ? CE ? A LYS 10 CE 8 1 Y 1 A LYS 989 ? NZ ? A LYS 10 NZ 9 1 Y 1 A ASP 1003 ? CG ? A ASP 24 CG 10 1 Y 1 A ASP 1003 ? OD1 ? A ASP 24 OD1 11 1 Y 1 A ASP 1003 ? OD2 ? A ASP 24 OD2 12 1 Y 1 A GLN 1017 ? CG ? A GLN 38 CG 13 1 Y 1 A GLN 1017 ? CD ? A GLN 38 CD 14 1 Y 1 A GLN 1017 ? OE1 ? A GLN 38 OE1 15 1 Y 1 A GLN 1017 ? NE2 ? A GLN 38 NE2 16 1 Y 1 A ARG 1024 ? CG ? A ARG 45 CG 17 1 Y 1 A ARG 1024 ? CD ? A ARG 45 CD 18 1 Y 1 A ARG 1024 ? NE ? A ARG 45 NE 19 1 Y 1 A ARG 1024 ? CZ ? A ARG 45 CZ 20 1 Y 1 A ARG 1024 ? NH1 ? A ARG 45 NH1 21 1 Y 1 A ARG 1024 ? NH2 ? A ARG 45 NH2 22 1 Y 1 A LYS 1026 ? CG ? A LYS 47 CG 23 1 Y 1 A LYS 1026 ? CD ? A LYS 47 CD 24 1 Y 1 A LYS 1026 ? CE ? A LYS 47 CE 25 1 Y 1 A LYS 1026 ? NZ ? A LYS 47 NZ 26 1 Y 1 A GLN 1028 ? CG ? A GLN 49 CG 27 1 Y 1 A GLN 1028 ? CD ? A GLN 49 CD 28 1 Y 1 A GLN 1028 ? OE1 ? A GLN 49 OE1 29 1 Y 1 A GLN 1028 ? NE2 ? A GLN 49 NE2 30 1 Y 1 A LYS 1068 ? CG ? A LYS 89 CG 31 1 Y 1 A LYS 1068 ? CD ? A LYS 89 CD 32 1 Y 1 A LYS 1068 ? CE ? A LYS 89 CE 33 1 Y 1 A LYS 1068 ? NZ ? A LYS 89 NZ 34 1 Y 1 A ARG 1092 ? CG ? A ARG 113 CG 35 1 Y 1 A ARG 1092 ? CD ? A ARG 113 CD 36 1 Y 1 A ARG 1092 ? NE ? A ARG 113 NE 37 1 Y 1 A ARG 1092 ? CZ ? A ARG 113 CZ 38 1 Y 1 A ARG 1092 ? NH1 ? A ARG 113 NH1 39 1 Y 1 A ARG 1092 ? NH2 ? A ARG 113 NH2 40 1 Y 1 A ARG 1109 ? CG ? A ARG 130 CG 41 1 Y 1 A ARG 1109 ? CD ? A ARG 130 CD 42 1 Y 1 A ARG 1109 ? NE ? A ARG 130 NE 43 1 Y 1 A ARG 1109 ? CZ ? A ARG 130 CZ 44 1 Y 1 A ARG 1109 ? NH1 ? A ARG 130 NH1 45 1 Y 1 A ARG 1109 ? NH2 ? A ARG 130 NH2 46 1 Y 1 A LYS 1136 ? CG ? A LYS 157 CG 47 1 Y 1 A LYS 1136 ? CD ? A LYS 157 CD 48 1 Y 1 A LYS 1136 ? CE ? A LYS 157 CE 49 1 Y 1 A LYS 1136 ? NZ ? A LYS 157 NZ 50 1 Y 1 A ARG 1161 ? CG ? A ARG 182 CG 51 1 Y 1 A ARG 1161 ? CD ? A ARG 182 CD 52 1 Y 1 A ARG 1161 ? NE ? A ARG 182 NE 53 1 Y 1 A ARG 1161 ? CZ ? A ARG 182 CZ 54 1 Y 1 A ARG 1161 ? NH1 ? A ARG 182 NH1 55 1 Y 1 A ARG 1161 ? NH2 ? A ARG 182 NH2 56 1 Y 1 A LYS 1165 ? CG ? A LYS 186 CG 57 1 Y 1 A LYS 1165 ? CD ? A LYS 186 CD 58 1 Y 1 A LYS 1165 ? CE ? A LYS 186 CE 59 1 Y 1 A LYS 1165 ? NZ ? A LYS 186 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 980 ? A GLY 1 2 1 Y 1 A SER 981 ? A SER 2 3 1 Y 1 A SER 1181 ? A SER 202 4 1 Y 1 A PRO 1182 ? A PRO 203 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GOL C1 C N N 137 GOL O1 O N N 138 GOL C2 C N N 139 GOL O2 O N N 140 GOL C3 C N N 141 GOL O3 O N N 142 GOL H11 H N N 143 GOL H12 H N N 144 GOL HO1 H N N 145 GOL H2 H N N 146 GOL HO2 H N N 147 GOL H31 H N N 148 GOL H32 H N N 149 GOL HO3 H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 LEU N N N N 197 LEU CA C N S 198 LEU C C N N 199 LEU O O N N 200 LEU CB C N N 201 LEU CG C N N 202 LEU CD1 C N N 203 LEU CD2 C N N 204 LEU OXT O N N 205 LEU H H N N 206 LEU H2 H N N 207 LEU HA H N N 208 LEU HB2 H N N 209 LEU HB3 H N N 210 LEU HG H N N 211 LEU HD11 H N N 212 LEU HD12 H N N 213 LEU HD13 H N N 214 LEU HD21 H N N 215 LEU HD22 H N N 216 LEU HD23 H N N 217 LEU HXT H N N 218 LYS N N N N 219 LYS CA C N S 220 LYS C C N N 221 LYS O O N N 222 LYS CB C N N 223 LYS CG C N N 224 LYS CD C N N 225 LYS CE C N N 226 LYS NZ N N N 227 LYS OXT O N N 228 LYS H H N N 229 LYS H2 H N N 230 LYS HA H N N 231 LYS HB2 H N N 232 LYS HB3 H N N 233 LYS HG2 H N N 234 LYS HG3 H N N 235 LYS HD2 H N N 236 LYS HD3 H N N 237 LYS HE2 H N N 238 LYS HE3 H N N 239 LYS HZ1 H N N 240 LYS HZ2 H N N 241 LYS HZ3 H N N 242 LYS HXT H N N 243 MET N N N N 244 MET CA C N S 245 MET C C N N 246 MET O O N N 247 MET CB C N N 248 MET CG C N N 249 MET SD S N N 250 MET CE C N N 251 MET OXT O N N 252 MET H H N N 253 MET H2 H N N 254 MET HA H N N 255 MET HB2 H N N 256 MET HB3 H N N 257 MET HG2 H N N 258 MET HG3 H N N 259 MET HE1 H N N 260 MET HE2 H N N 261 MET HE3 H N N 262 MET HXT H N N 263 PHE N N N N 264 PHE CA C N S 265 PHE C C N N 266 PHE O O N N 267 PHE CB C N N 268 PHE CG C Y N 269 PHE CD1 C Y N 270 PHE CD2 C Y N 271 PHE CE1 C Y N 272 PHE CE2 C Y N 273 PHE CZ C Y N 274 PHE OXT O N N 275 PHE H H N N 276 PHE H2 H N N 277 PHE HA H N N 278 PHE HB2 H N N 279 PHE HB3 H N N 280 PHE HD1 H N N 281 PHE HD2 H N N 282 PHE HE1 H N N 283 PHE HE2 H N N 284 PHE HZ H N N 285 PHE HXT H N N 286 PRO N N N N 287 PRO CA C N S 288 PRO C C N N 289 PRO O O N N 290 PRO CB C N N 291 PRO CG C N N 292 PRO CD C N N 293 PRO OXT O N N 294 PRO H H N N 295 PRO HA H N N 296 PRO HB2 H N N 297 PRO HB3 H N N 298 PRO HG2 H N N 299 PRO HG3 H N N 300 PRO HD2 H N N 301 PRO HD3 H N N 302 PRO HXT H N N 303 SER N N N N 304 SER CA C N S 305 SER C C N N 306 SER O O N N 307 SER CB C N N 308 SER OG O N N 309 SER OXT O N N 310 SER H H N N 311 SER H2 H N N 312 SER HA H N N 313 SER HB2 H N N 314 SER HB3 H N N 315 SER HG H N N 316 SER HXT H N N 317 SO4 S S N N 318 SO4 O1 O N N 319 SO4 O2 O N N 320 SO4 O3 O N N 321 SO4 O4 O N N 322 THR N N N N 323 THR CA C N S 324 THR C C N N 325 THR O O N N 326 THR CB C N R 327 THR OG1 O N N 328 THR CG2 C N N 329 THR OXT O N N 330 THR H H N N 331 THR H2 H N N 332 THR HA H N N 333 THR HB H N N 334 THR HG1 H N N 335 THR HG21 H N N 336 THR HG22 H N N 337 THR HG23 H N N 338 THR HXT H N N 339 TRP N N N N 340 TRP CA C N S 341 TRP C C N N 342 TRP O O N N 343 TRP CB C N N 344 TRP CG C Y N 345 TRP CD1 C Y N 346 TRP CD2 C Y N 347 TRP NE1 N Y N 348 TRP CE2 C Y N 349 TRP CE3 C Y N 350 TRP CZ2 C Y N 351 TRP CZ3 C Y N 352 TRP CH2 C Y N 353 TRP OXT O N N 354 TRP H H N N 355 TRP H2 H N N 356 TRP HA H N N 357 TRP HB2 H N N 358 TRP HB3 H N N 359 TRP HD1 H N N 360 TRP HE1 H N N 361 TRP HE3 H N N 362 TRP HZ2 H N N 363 TRP HZ3 H N N 364 TRP HH2 H N N 365 TRP HXT H N N 366 TYR N N N N 367 TYR CA C N S 368 TYR C C N N 369 TYR O O N N 370 TYR CB C N N 371 TYR CG C Y N 372 TYR CD1 C Y N 373 TYR CD2 C Y N 374 TYR CE1 C Y N 375 TYR CE2 C Y N 376 TYR CZ C Y N 377 TYR OH O N N 378 TYR OXT O N N 379 TYR H H N N 380 TYR H2 H N N 381 TYR HA H N N 382 TYR HB2 H N N 383 TYR HB3 H N N 384 TYR HD1 H N N 385 TYR HD2 H N N 386 TYR HE1 H N N 387 TYR HE2 H N N 388 TYR HH H N N 389 TYR HXT H N N 390 VAL N N N N 391 VAL CA C N S 392 VAL C C N N 393 VAL O O N N 394 VAL CB C N N 395 VAL CG1 C N N 396 VAL CG2 C N N 397 VAL OXT O N N 398 VAL H H N N 399 VAL H2 H N N 400 VAL HA H N N 401 VAL HB H N N 402 VAL HG11 H N N 403 VAL HG12 H N N 404 VAL HG13 H N N 405 VAL HG21 H N N 406 VAL HG22 H N N 407 VAL HG23 H N N 408 VAL HXT H N N 409 ZN ZN ZN N N 410 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 MET N CA sing N N 231 MET N H sing N N 232 MET N H2 sing N N 233 MET CA C sing N N 234 MET CA CB sing N N 235 MET CA HA sing N N 236 MET C O doub N N 237 MET C OXT sing N N 238 MET CB CG sing N N 239 MET CB HB2 sing N N 240 MET CB HB3 sing N N 241 MET CG SD sing N N 242 MET CG HG2 sing N N 243 MET CG HG3 sing N N 244 MET SD CE sing N N 245 MET CE HE1 sing N N 246 MET CE HE2 sing N N 247 MET CE HE3 sing N N 248 MET OXT HXT sing N N 249 PHE N CA sing N N 250 PHE N H sing N N 251 PHE N H2 sing N N 252 PHE CA C sing N N 253 PHE CA CB sing N N 254 PHE CA HA sing N N 255 PHE C O doub N N 256 PHE C OXT sing N N 257 PHE CB CG sing N N 258 PHE CB HB2 sing N N 259 PHE CB HB3 sing N N 260 PHE CG CD1 doub Y N 261 PHE CG CD2 sing Y N 262 PHE CD1 CE1 sing Y N 263 PHE CD1 HD1 sing N N 264 PHE CD2 CE2 doub Y N 265 PHE CD2 HD2 sing N N 266 PHE CE1 CZ doub Y N 267 PHE CE1 HE1 sing N N 268 PHE CE2 CZ sing Y N 269 PHE CE2 HE2 sing N N 270 PHE CZ HZ sing N N 271 PHE OXT HXT sing N N 272 PRO N CA sing N N 273 PRO N CD sing N N 274 PRO N H sing N N 275 PRO CA C sing N N 276 PRO CA CB sing N N 277 PRO CA HA sing N N 278 PRO C O doub N N 279 PRO C OXT sing N N 280 PRO CB CG sing N N 281 PRO CB HB2 sing N N 282 PRO CB HB3 sing N N 283 PRO CG CD sing N N 284 PRO CG HG2 sing N N 285 PRO CG HG3 sing N N 286 PRO CD HD2 sing N N 287 PRO CD HD3 sing N N 288 PRO OXT HXT sing N N 289 SER N CA sing N N 290 SER N H sing N N 291 SER N H2 sing N N 292 SER CA C sing N N 293 SER CA CB sing N N 294 SER CA HA sing N N 295 SER C O doub N N 296 SER C OXT sing N N 297 SER CB OG sing N N 298 SER CB HB2 sing N N 299 SER CB HB3 sing N N 300 SER OG HG sing N N 301 SER OXT HXT sing N N 302 SO4 S O1 doub N N 303 SO4 S O2 doub N N 304 SO4 S O3 sing N N 305 SO4 S O4 sing N N 306 THR N CA sing N N 307 THR N H sing N N 308 THR N H2 sing N N 309 THR CA C sing N N 310 THR CA CB sing N N 311 THR CA HA sing N N 312 THR C O doub N N 313 THR C OXT sing N N 314 THR CB OG1 sing N N 315 THR CB CG2 sing N N 316 THR CB HB sing N N 317 THR OG1 HG1 sing N N 318 THR CG2 HG21 sing N N 319 THR CG2 HG22 sing N N 320 THR CG2 HG23 sing N N 321 THR OXT HXT sing N N 322 TRP N CA sing N N 323 TRP N H sing N N 324 TRP N H2 sing N N 325 TRP CA C sing N N 326 TRP CA CB sing N N 327 TRP CA HA sing N N 328 TRP C O doub N N 329 TRP C OXT sing N N 330 TRP CB CG sing N N 331 TRP CB HB2 sing N N 332 TRP CB HB3 sing N N 333 TRP CG CD1 doub Y N 334 TRP CG CD2 sing Y N 335 TRP CD1 NE1 sing Y N 336 TRP CD1 HD1 sing N N 337 TRP CD2 CE2 doub Y N 338 TRP CD2 CE3 sing Y N 339 TRP NE1 CE2 sing Y N 340 TRP NE1 HE1 sing N N 341 TRP CE2 CZ2 sing Y N 342 TRP CE3 CZ3 doub Y N 343 TRP CE3 HE3 sing N N 344 TRP CZ2 CH2 doub Y N 345 TRP CZ2 HZ2 sing N N 346 TRP CZ3 CH2 sing Y N 347 TRP CZ3 HZ3 sing N N 348 TRP CH2 HH2 sing N N 349 TRP OXT HXT sing N N 350 TYR N CA sing N N 351 TYR N H sing N N 352 TYR N H2 sing N N 353 TYR CA C sing N N 354 TYR CA CB sing N N 355 TYR CA HA sing N N 356 TYR C O doub N N 357 TYR C OXT sing N N 358 TYR CB CG sing N N 359 TYR CB HB2 sing N N 360 TYR CB HB3 sing N N 361 TYR CG CD1 doub Y N 362 TYR CG CD2 sing Y N 363 TYR CD1 CE1 sing Y N 364 TYR CD1 HD1 sing N N 365 TYR CD2 CE2 doub Y N 366 TYR CD2 HD2 sing N N 367 TYR CE1 CZ doub Y N 368 TYR CE1 HE1 sing N N 369 TYR CE2 CZ sing Y N 370 TYR CE2 HE2 sing N N 371 TYR CZ OH sing N N 372 TYR OH HH sing N N 373 TYR OXT HXT sing N N 374 VAL N CA sing N N 375 VAL N H sing N N 376 VAL N H2 sing N N 377 VAL CA C sing N N 378 VAL CA CB sing N N 379 VAL CA HA sing N N 380 VAL C O doub N N 381 VAL C OXT sing N N 382 VAL CB CG1 sing N N 383 VAL CB CG2 sing N N 384 VAL CB HB sing N N 385 VAL CG1 HG11 sing N N 386 VAL CG1 HG12 sing N N 387 VAL CG1 HG13 sing N N 388 VAL CG2 HG21 sing N N 389 VAL CG2 HG22 sing N N 390 VAL CG2 HG23 sing N N 391 VAL OXT HXT sing N N 392 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number R01AI085051 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 GLYCEROL GOL 4 'SULFATE ION' SO4 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6P6M _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'P 21 21 21' _space_group.name_Hall 'P 2ac 2ab' _space_group.IT_number 19 _space_group.crystal_system orthorhombic _space_group.id 1 #