data_6VJO # _entry.id 6VJO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6VJO pdb_00006vjo 10.2210/pdb6vjo/pdb WWPDB D_1000246514 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6VJO _pdbx_database_status.recvd_initial_deposition_date 2020-01-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Outlaw, V.K.' 1 0000-0001-7054-4204 'Kreitler, D.F.' 2 0000-0003-4758-7913 'Gellman, S.H.' 3 0000-0001-5617-0058 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_id_ASTM JACSAT _citation.journal_id_CSD ? _citation.journal_id_ISSN 1520-5126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 143 _citation.language ? _citation.page_first 5958 _citation.page_last 5966 _citation.title 'Engineering Protease-Resistant Peptides to Inhibit Human Parainfluenza Viral Respiratory Infection.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/jacs.1c01565 _citation.pdbx_database_id_PubMed 33825470 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Outlaw, V.K.' 1 ? primary 'Cheloha, R.W.' 2 ? primary 'Jurgens, E.M.' 3 ? primary 'Bovier, F.T.' 4 ? primary 'Zhu, Y.' 5 ? primary 'Kreitler, D.F.' 6 ? primary 'Harder, O.' 7 ? primary 'Niewiesk, S.' 8 ? primary 'Porotto, M.' 9 ? primary 'Gellman, S.H.' 10 ? primary 'Moscona, A.' 11 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 6VJO _cell.details ? _cell.formula_units_Z ? _cell.length_a 48.345 _cell.length_a_esd ? _cell.length_b 48.345 _cell.length_b_esd ? _cell.length_c 134.546 _cell.length_c_esd ? _cell.volume 272335.685 _cell.volume_esd ? _cell.Z_PDB 9 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VJO _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall 'A 3' _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Fusion glycoprotein F0' 4191.891 1 ? 'I458(XCP), E459V, K462(XPC), A463I, S465(XCP), E469(B3E), E472(B3E), R476(XPC), Q479(XCP), S483(XCP)' ? ;alpha/beta-VI is a synthetic alpha/beta peptide derived from residues 449-484 of the HPIV3 fusion glycoprotein C-terminal heptad repeat domain with substitutions I458(XCP), E459V, K462(XPC), A463I, S465(XCP), E469(B3E), E472(B3E), R476(XPC), Q479(XCP), S483(XCP). It is acetylated at the N-terminus and amidated at the C-terminus. ; 2 polymer syn 'Fusion glycoprotein F0' 5656.473 1 ? ? ? ;This compound is derived from residues 139-189 of the HPIV3 fusion glycoprotein. It is acetylated at the N-terminus and amidated at the C-terminus. ; 3 water nat water 18.015 35 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes '(ACE)VALDPIDIS(XCP)VLN(XPC)IK(XCP)DLE(B3E)SK(B3E)WIR(XPC)SN(XCP)KLD(XCP)I(NH2)' XVALDPIDISXVLNXIKXDLEESKEWIRXSNXKLDXIX A ? 2 'polypeptide(L)' no yes '(ACE)QARSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIKSVQDYVNKEIVPSIAR(NH2)' XQARSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIKSVQDYVNKEIVPSIARX B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 VAL n 1 3 ALA n 1 4 LEU n 1 5 ASP n 1 6 PRO n 1 7 ILE n 1 8 ASP n 1 9 ILE n 1 10 SER n 1 11 XCP n 1 12 VAL n 1 13 LEU n 1 14 ASN n 1 15 XPC n 1 16 ILE n 1 17 LYS n 1 18 XCP n 1 19 ASP n 1 20 LEU n 1 21 GLU n 1 22 B3E n 1 23 SER n 1 24 LYS n 1 25 B3E n 1 26 TRP n 1 27 ILE n 1 28 ARG n 1 29 XPC n 1 30 SER n 1 31 ASN n 1 32 XCP n 1 33 LYS n 1 34 LEU n 1 35 ASP n 1 36 XCP n 1 37 ILE n 1 38 NH2 n 2 1 ACE n 2 2 GLN n 2 3 ALA n 2 4 ARG n 2 5 SER n 2 6 ASP n 2 7 ILE n 2 8 GLU n 2 9 LYS n 2 10 LEU n 2 11 LYS n 2 12 GLU n 2 13 ALA n 2 14 ILE n 2 15 ARG n 2 16 ASP n 2 17 THR n 2 18 ASN n 2 19 LYS n 2 20 ALA n 2 21 VAL n 2 22 GLN n 2 23 SER n 2 24 VAL n 2 25 GLN n 2 26 SER n 2 27 SER n 2 28 ILE n 2 29 GLY n 2 30 ASN n 2 31 LEU n 2 32 ILE n 2 33 VAL n 2 34 ALA n 2 35 ILE n 2 36 LYS n 2 37 SER n 2 38 VAL n 2 39 GLN n 2 40 ASP n 2 41 TYR n 2 42 VAL n 2 43 ASN n 2 44 LYS n 2 45 GLU n 2 46 ILE n 2 47 VAL n 2 48 PRO n 2 49 SER n 2 50 ILE n 2 51 ALA n 2 52 ARG n 2 53 NH2 n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 38 'Human respirovirus 3' ? 11216 ? 2 1 sample 1 53 'Human respirovirus 3' ? 11216 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP A0A1X9QNY3_9MONO A0A1X9QNY3 ? 1 VALDPIDISIELNKAKSDLEESKEWIRRSNQKLDSI 449 2 UNP Q84193_9MONO Q84193 ? 2 QARSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIKSVQDYVNKEIVPSIAR 139 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6VJO A 2 ? 37 ? A0A1X9QNY3 449 ? 484 ? 449 484 2 2 6VJO B 2 ? 52 ? Q84193 139 ? 189 ? 139 189 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6VJO ACE A 1 ? UNP A0A1X9QNY3 ? ? acetylation 448 1 1 6VJO XCP A 11 ? UNP A0A1X9QNY3 ILE 458 'engineered mutation' 458 2 1 6VJO VAL A 12 ? UNP A0A1X9QNY3 GLU 459 'engineered mutation' 459 3 1 6VJO XPC A 15 ? UNP A0A1X9QNY3 LYS 462 'engineered mutation' 462 4 1 6VJO ILE A 16 ? UNP A0A1X9QNY3 ALA 463 'engineered mutation' 463 5 1 6VJO XCP A 18 ? UNP A0A1X9QNY3 SER 465 'engineered mutation' 465 6 1 6VJO XPC A 29 ? UNP A0A1X9QNY3 ARG 476 'engineered mutation' 476 7 1 6VJO XCP A 32 ? UNP A0A1X9QNY3 GLN 479 'engineered mutation' 479 8 1 6VJO XCP A 36 ? UNP A0A1X9QNY3 SER 483 'engineered mutation' 483 9 1 6VJO NH2 A 38 ? UNP A0A1X9QNY3 ? ? amidation 485 10 2 6VJO ACE B 1 ? UNP Q84193 ? ? acetylation 138 11 2 6VJO NH2 B 53 ? UNP Q84193 ? ? amidation 190 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 B3E 'L-peptide linking' n '(3S)-3-AMINOHEXANEDIOIC ACID' ? 'C6 H11 N O4' 161.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 XCP peptide-like . '(1S,2S)-2-aminocyclopentanecarboxylic acid' ? 'C6 H11 N O2' 129.157 XPC peptide-like . '(3S,4R)-4-aminopyrrolidine-3-carboxylic acid' '(3R,4S)-3-Aminopyrrolidine-4-carboxylic acid' 'C5 H10 N2 O2' 130.145 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6VJO _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.07 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 59.97 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '30 mM NaF, 30 mM NaBr, 30 mM NaI, 20% (v/v) PEG 500 MME, 10% (w/v) PEG 20000 in 100 mM imidazole/MES monohydrate buffer (pH 6.5)' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'BRUKER SMART 6000' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-07-01 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.542 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'BRUKER AXS MICROSTAR' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.542 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate 16.48 _reflns.entry_id 6VJO _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.00 _reflns.d_resolution_low 35.55 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 7675 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 96.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 8.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.161 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.5 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.171 _reflns.pdbx_Rpim_I_all 0.058 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.996 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.13 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.4 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1107 _reflns_shell.percent_possible_all 83.9 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value 0.161 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.944 _reflns_shell.pdbx_Rpim_I_all 0.478 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.426 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 32.30 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6VJO _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.00 _refine.ls_d_res_low 35.55 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7660 _refine.ls_number_reflns_R_free 776 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 96.66 _refine.ls_percent_reflns_R_free 10.13 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2021 _refine.ls_R_factor_R_free 0.2256 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1996 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.00 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1ZTM _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 26.9055 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3378 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 35.55 _refine_hist.number_atoms_solvent 35 _refine_hist.number_atoms_total 700 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 665 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0052 ? 674 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.7454 ? 917 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0361 ? 117 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0029 ? 116 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 17.6350 ? 241 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.00 2.13 . . 113 990 83.56 . . . 0.4166 . 0.3966 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.13 2.29 . . 134 1192 99.92 . . . 0.2917 . 0.2642 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.29 2.52 . . 132 1176 100.00 . . . 0.2287 . 0.1775 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.52 2.88 . . 135 1184 100.00 . . . 0.1896 . 0.1704 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.89 3.63 . . 128 1174 98.41 . . . 0.1895 . 0.1710 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.63 35.55 . . 134 1168 98.19 . . . 0.1848 . 0.1595 . . . . . . . . . . . # _struct.entry_id 6VJO _struct.title 'Human parainfluenza virus type 3 fusion glycoprotein N-terminal heptad repeat domain+alpha/beta-VI' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6VJO _struct_keywords.text 'Fusion protein, fusion inhibitor, six-helix bundle, ANTIVIRAL PROTEIN, alpha/beta-peptide' _struct_keywords.pdbx_keywords 'ANTIVIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ILE A 9 ? ILE A 37 ? ILE A 456 ILE A 484 1 ? 29 HELX_P HELX_P2 AA2 SER B 5 ? GLU B 45 ? SER B 142 GLU B 182 1 ? 41 HELX_P HELX_P3 AA3 GLU B 45 ? ARG B 52 ? GLU B 182 ARG B 189 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ACE 1 C ? ? ? 1_555 A VAL 2 N ? ? A ACE 448 A VAL 449 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? A SER 10 C ? ? ? 1_555 A XCP 11 N ? ? A SER 457 A XCP 458 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale3 covale both ? A XCP 11 C ? ? ? 1_555 A VAL 12 N ? ? A XCP 458 A VAL 459 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale4 covale both ? A ASN 14 C ? ? ? 1_555 A XPC 15 N ? ? A ASN 461 A XPC 462 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale5 covale both ? A XPC 15 C ? ? ? 1_555 A ILE 16 N ? ? A XPC 462 A ILE 463 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale6 covale both ? A LYS 17 C ? ? ? 1_555 A XCP 18 N ? ? A LYS 464 A XCP 465 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale7 covale both ? A XCP 18 C ? ? ? 1_555 A ASP 19 N ? ? A XCP 465 A ASP 466 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale8 covale both ? A GLU 21 C ? ? ? 1_555 A B3E 22 N ? ? A GLU 468 A B3E 469 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale9 covale both ? A B3E 22 C ? ? ? 1_555 A SER 23 N ? ? A B3E 469 A SER 470 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale10 covale both ? A LYS 24 C ? ? ? 1_555 A B3E 25 N ? ? A LYS 471 A B3E 472 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale11 covale both ? A B3E 25 C ? ? ? 1_555 A TRP 26 N ? ? A B3E 472 A TRP 473 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale12 covale both ? A ARG 28 C ? ? ? 1_555 A XPC 29 N ? ? A ARG 475 A XPC 476 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale13 covale both ? A XPC 29 C ? ? ? 1_555 A SER 30 N ? ? A XPC 476 A SER 477 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale14 covale both ? A ASN 31 C ? ? ? 1_555 A XCP 32 N ? ? A ASN 478 A XCP 479 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale15 covale both ? A XCP 32 C ? ? ? 1_555 A LYS 33 N ? ? A XCP 479 A LYS 480 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale16 covale both ? A ASP 35 C ? ? ? 1_555 A XCP 36 N ? ? A ASP 482 A XCP 483 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale17 covale both ? A XCP 36 C ? ? ? 1_555 A ILE 37 N ? ? A XCP 483 A ILE 484 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale18 covale both ? A ILE 37 C ? ? ? 1_555 A NH2 38 N ? ? A ILE 484 A NH2 485 1_555 ? ? ? ? ? ? ? 1.329 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 6VJO _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.020685 _atom_sites.fract_transf_matrix[1][2] 0.011942 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023885 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007432 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.51345 0.48472 ? ? 24.73122 6.32584 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 448 448 ACE ACE A . n A 1 2 VAL 2 449 449 VAL VAL A . n A 1 3 ALA 3 450 450 ALA ALA A . n A 1 4 LEU 4 451 451 LEU LEU A . n A 1 5 ASP 5 452 452 ASP ASP A . n A 1 6 PRO 6 453 453 PRO PRO A . n A 1 7 ILE 7 454 454 ILE ILE A . n A 1 8 ASP 8 455 455 ASP ASP A . n A 1 9 ILE 9 456 456 ILE ILE A . n A 1 10 SER 10 457 457 SER SER A . n A 1 11 XCP 11 458 458 XCP XCP A . n A 1 12 VAL 12 459 459 VAL VAL A . n A 1 13 LEU 13 460 460 LEU LEU A . n A 1 14 ASN 14 461 461 ASN ASN A . n A 1 15 XPC 15 462 462 XPC XPC A . n A 1 16 ILE 16 463 463 ILE ILE A . n A 1 17 LYS 17 464 464 LYS LYS A . n A 1 18 XCP 18 465 465 XCP XCP A . n A 1 19 ASP 19 466 466 ASP ASP A . n A 1 20 LEU 20 467 467 LEU LEU A . n A 1 21 GLU 21 468 468 GLU GLU A . n A 1 22 B3E 22 469 469 B3E B3E A . n A 1 23 SER 23 470 470 SER SER A . n A 1 24 LYS 24 471 471 LYS LYS A . n A 1 25 B3E 25 472 472 B3E B3E A . n A 1 26 TRP 26 473 473 TRP TRP A . n A 1 27 ILE 27 474 474 ILE ILE A . n A 1 28 ARG 28 475 475 ARG ARG A . n A 1 29 XPC 29 476 476 XPC XPC A . n A 1 30 SER 30 477 477 SER SER A . n A 1 31 ASN 31 478 478 ASN ASN A . n A 1 32 XCP 32 479 479 XCP XCP A . n A 1 33 LYS 33 480 480 LYS LYS A . n A 1 34 LEU 34 481 481 LEU LEU A . n A 1 35 ASP 35 482 482 ASP ASP A . n A 1 36 XCP 36 483 483 XCP XCP A . n A 1 37 ILE 37 484 484 ILE ILE A . n A 1 38 NH2 38 485 485 NH2 NH2 A . n B 2 1 ACE 1 138 ? ? ? B . n B 2 2 GLN 2 139 ? ? ? B . n B 2 3 ALA 3 140 ? ? ? B . n B 2 4 ARG 4 141 141 ARG ARG B . n B 2 5 SER 5 142 142 SER SER B . n B 2 6 ASP 6 143 143 ASP ASP B . n B 2 7 ILE 7 144 144 ILE ILE B . n B 2 8 GLU 8 145 145 GLU GLU B . n B 2 9 LYS 9 146 146 LYS LYS B . n B 2 10 LEU 10 147 147 LEU LEU B . n B 2 11 LYS 11 148 148 LYS LYS B . n B 2 12 GLU 12 149 149 GLU GLU B . n B 2 13 ALA 13 150 150 ALA ALA B . n B 2 14 ILE 14 151 151 ILE ILE B . n B 2 15 ARG 15 152 152 ARG ARG B . n B 2 16 ASP 16 153 153 ASP ASP B . n B 2 17 THR 17 154 154 THR THR B . n B 2 18 ASN 18 155 155 ASN ASN B . n B 2 19 LYS 19 156 156 LYS LYS B . n B 2 20 ALA 20 157 157 ALA ALA B . n B 2 21 VAL 21 158 158 VAL VAL B . n B 2 22 GLN 22 159 159 GLN GLN B . n B 2 23 SER 23 160 160 SER SER B . n B 2 24 VAL 24 161 161 VAL VAL B . n B 2 25 GLN 25 162 162 GLN GLN B . n B 2 26 SER 26 163 163 SER SER B . n B 2 27 SER 27 164 164 SER SER B . n B 2 28 ILE 28 165 165 ILE ILE B . n B 2 29 GLY 29 166 166 GLY GLY B . n B 2 30 ASN 30 167 167 ASN ASN B . n B 2 31 LEU 31 168 168 LEU LEU B . n B 2 32 ILE 32 169 169 ILE ILE B . n B 2 33 VAL 33 170 170 VAL VAL B . n B 2 34 ALA 34 171 171 ALA ALA B . n B 2 35 ILE 35 172 172 ILE ILE B . n B 2 36 LYS 36 173 173 LYS LYS B . n B 2 37 SER 37 174 174 SER SER B . n B 2 38 VAL 38 175 175 VAL VAL B . n B 2 39 GLN 39 176 176 GLN GLN B . n B 2 40 ASP 40 177 177 ASP ASP B . n B 2 41 TYR 41 178 178 TYR TYR B . n B 2 42 VAL 42 179 179 VAL VAL B . n B 2 43 ASN 43 180 180 ASN ASN B . n B 2 44 LYS 44 181 181 LYS LYS B . n B 2 45 GLU 45 182 182 GLU GLU B . n B 2 46 ILE 46 183 183 ILE ILE B . n B 2 47 VAL 47 184 184 VAL VAL B . n B 2 48 PRO 48 185 185 PRO PRO B . n B 2 49 SER 49 186 186 SER SER B . n B 2 50 ILE 50 187 187 ILE ILE B . n B 2 51 ALA 51 188 188 ALA ALA B . n B 2 52 ARG 52 189 189 ARG ARG B . n B 2 53 NH2 53 190 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 501 18 HOH HOH A . C 3 HOH 2 502 17 HOH HOH A . C 3 HOH 3 503 32 HOH HOH A . C 3 HOH 4 504 38 HOH HOH A . C 3 HOH 5 505 3 HOH HOH A . C 3 HOH 6 506 9 HOH HOH A . C 3 HOH 7 507 31 HOH HOH A . C 3 HOH 8 508 8 HOH HOH A . C 3 HOH 9 509 12 HOH HOH A . C 3 HOH 10 510 11 HOH HOH A . C 3 HOH 11 511 13 HOH HOH A . C 3 HOH 12 512 22 HOH HOH A . C 3 HOH 13 513 37 HOH HOH A . C 3 HOH 14 514 39 HOH HOH A . C 3 HOH 15 515 28 HOH HOH A . C 3 HOH 16 516 34 HOH HOH A . C 3 HOH 17 517 25 HOH HOH A . D 3 HOH 1 201 10 HOH HOH B . D 3 HOH 2 202 2 HOH HOH B . D 3 HOH 3 203 16 HOH HOH B . D 3 HOH 4 204 27 HOH HOH B . D 3 HOH 5 205 30 HOH HOH B . D 3 HOH 6 206 15 HOH HOH B . D 3 HOH 7 207 19 HOH HOH B . D 3 HOH 8 208 1 HOH HOH B . D 3 HOH 9 209 4 HOH HOH B . D 3 HOH 10 210 5 HOH HOH B . D 3 HOH 11 211 6 HOH HOH B . D 3 HOH 12 212 21 HOH HOH B . D 3 HOH 13 213 7 HOH HOH B . D 3 HOH 14 214 20 HOH HOH B . D 3 HOH 15 215 14 HOH HOH B . D 3 HOH 16 216 35 HOH HOH B . D 3 HOH 17 217 26 HOH HOH B . D 3 HOH 18 218 36 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A B3E 22 A B3E 469 ? GLU 'modified residue' 2 A B3E 25 A B3E 472 ? GLU 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 14900 ? 1 MORE -133 ? 1 'SSA (A^2)' 11050 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_755 -y+2,x-y,z -0.5000000000 -0.8660254038 0.0000000000 96.6900000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_775 -x+y+2,-x+2,z -0.5000000000 0.8660254038 0.0000000000 48.3450000000 -0.8660254038 -0.5000000000 0.0000000000 83.7359962919 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-04-21 2 'Structure model' 1 1 2021-05-05 3 'Structure model' 1 2 2023-10-11 4 'Structure model' 2 0 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Atomic model' 6 4 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model 7 4 'Structure model' atom_site 8 4 'Structure model' atom_site_anisotrop 9 4 'Structure model' chem_comp_atom 10 4 'Structure model' chem_comp_bond 11 4 'Structure model' pdbx_validate_main_chain_plane 12 4 'Structure model' pdbx_validate_peptide_omega 13 4 'Structure model' pdbx_validate_torsion # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation_author.identifier_ORCID' 5 3 'Structure model' '_database_2.pdbx_DOI' 6 3 'Structure model' '_database_2.pdbx_database_accession' 7 4 'Structure model' '_atom_site.auth_atom_id' 8 4 'Structure model' '_atom_site.label_atom_id' 9 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 10 4 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 11 4 'Structure model' '_chem_comp_atom.atom_id' 12 4 'Structure model' '_chem_comp_bond.atom_id_1' 13 4 'Structure model' '_chem_comp_bond.atom_id_2' 14 4 'Structure model' '_pdbx_validate_peptide_omega.auth_comp_id_1' 15 4 'Structure model' '_pdbx_validate_peptide_omega.auth_comp_id_2' 16 4 'Structure model' '_pdbx_validate_peptide_omega.auth_seq_id_1' 17 4 'Structure model' '_pdbx_validate_peptide_omega.auth_seq_id_2' 18 4 'Structure model' '_pdbx_validate_peptide_omega.omega' # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y,x-y,z 3 -x+y,-x,z 4 x+1/3,y+2/3,z+2/3 5 -y+1/3,x-y+2/3,z+2/3 6 -x+y+1/3,-x+2/3,z+2/3 7 x+2/3,y+1/3,z+1/3 8 -y+2/3,x-y+1/3,z+1/3 9 -x+y+2/3,-x+1/3,z+1/3 # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 40.9956304456 _pdbx_refine_tls.origin_y 27.6205915257 _pdbx_refine_tls.origin_z -12.3618099208 _pdbx_refine_tls.T[1][1] 0.0714114061446 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] -0.00872840867024 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] -0.00604962259941 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.120827383566 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] -0.00582582508272 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.108728149411 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 0.531188372509 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] -0.0640536512793 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] -0.104432518034 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 0.50277149129 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] 0.390002075532 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 2.12496776748 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] 0.00407986816956 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] 0.0308678333427 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] 0.0200295953317 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] -0.0803972125233 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] 0.0412449527367 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] 0.0715765334756 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] 0.0640240676534 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] -0.544098619999 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] 0.00556540623083 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17.1_3660 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_entry_details.entry_id 6VJO _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 512 ? ? O A HOH 515 ? ? 2.10 2 1 O B HOH 209 ? ? O B HOH 215 ? ? 2.17 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ALA _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 450 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -116.64 _pdbx_validate_torsion.psi 51.89 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 SER A 457 ? ? XCP A 458 ? ? 135.91 2 1 ASN A 461 ? ? XPC A 462 ? ? 134.79 3 1 LYS A 464 ? ? XCP A 465 ? ? 136.93 4 1 B3E A 469 ? ? SER A 470 ? ? 146.08 5 1 B3E A 472 ? ? TRP A 473 ? ? 146.99 6 1 ARG A 475 ? ? XPC A 476 ? ? 135.01 7 1 ASN A 478 ? ? XCP A 479 ? ? 136.94 8 1 ASP A 482 ? ? XCP A 483 ? ? 135.99 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 B3E A 469 ? ? -16.54 2 1 B3E A 472 ? ? -16.61 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B ARG 141 ? CG ? B ARG 4 CG 2 1 Y 1 B ARG 141 ? CD ? B ARG 4 CD 3 1 Y 1 B ARG 141 ? NE ? B ARG 4 NE 4 1 Y 1 B ARG 141 ? CZ ? B ARG 4 CZ 5 1 Y 1 B ARG 141 ? NH1 ? B ARG 4 NH1 6 1 Y 1 B ARG 141 ? NH2 ? B ARG 4 NH2 7 1 Y 1 B ARG 189 ? CG ? B ARG 52 CG 8 1 Y 1 B ARG 189 ? CD ? B ARG 52 CD 9 1 Y 1 B ARG 189 ? NE ? B ARG 52 NE 10 1 Y 1 B ARG 189 ? CZ ? B ARG 52 CZ 11 1 Y 1 B ARG 189 ? NH1 ? B ARG 52 NH1 12 1 Y 1 B ARG 189 ? NH2 ? B ARG 52 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B ACE 138 ? B ACE 1 2 1 Y 1 B GLN 139 ? B GLN 2 3 1 Y 1 B ALA 140 ? B ALA 3 4 1 Y 1 B NH2 190 ? B NH2 53 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 B3E N N N N 81 B3E CA C N S 82 B3E CG C N N 83 B3E CD C N N 84 B3E CE C N N 85 B3E OF2 O N N 86 B3E OF1 O N N 87 B3E CB C N N 88 B3E C C N N 89 B3E O O N N 90 B3E OXT O N N 91 B3E H H N N 92 B3E H2 H N N 93 B3E HA H N N 94 B3E HG2 H N N 95 B3E HG3 H N N 96 B3E HD2 H N N 97 B3E HD3 H N N 98 B3E HOF1 H N N 99 B3E HB1 H N N 100 B3E HB2 H N N 101 B3E HXT H N N 102 GLN N N N N 103 GLN CA C N S 104 GLN C C N N 105 GLN O O N N 106 GLN CB C N N 107 GLN CG C N N 108 GLN CD C N N 109 GLN OE1 O N N 110 GLN NE2 N N N 111 GLN OXT O N N 112 GLN H H N N 113 GLN H2 H N N 114 GLN HA H N N 115 GLN HB2 H N N 116 GLN HB3 H N N 117 GLN HG2 H N N 118 GLN HG3 H N N 119 GLN HE21 H N N 120 GLN HE22 H N N 121 GLN HXT H N N 122 GLU N N N N 123 GLU CA C N S 124 GLU C C N N 125 GLU O O N N 126 GLU CB C N N 127 GLU CG C N N 128 GLU CD C N N 129 GLU OE1 O N N 130 GLU OE2 O N N 131 GLU OXT O N N 132 GLU H H N N 133 GLU H2 H N N 134 GLU HA H N N 135 GLU HB2 H N N 136 GLU HB3 H N N 137 GLU HG2 H N N 138 GLU HG3 H N N 139 GLU HE2 H N N 140 GLU HXT H N N 141 GLY N N N N 142 GLY CA C N N 143 GLY C C N N 144 GLY O O N N 145 GLY OXT O N N 146 GLY H H N N 147 GLY H2 H N N 148 GLY HA2 H N N 149 GLY HA3 H N N 150 GLY HXT H N N 151 HOH O O N N 152 HOH H1 H N N 153 HOH H2 H N N 154 ILE N N N N 155 ILE CA C N S 156 ILE C C N N 157 ILE O O N N 158 ILE CB C N S 159 ILE CG1 C N N 160 ILE CG2 C N N 161 ILE CD1 C N N 162 ILE OXT O N N 163 ILE H H N N 164 ILE H2 H N N 165 ILE HA H N N 166 ILE HB H N N 167 ILE HG12 H N N 168 ILE HG13 H N N 169 ILE HG21 H N N 170 ILE HG22 H N N 171 ILE HG23 H N N 172 ILE HD11 H N N 173 ILE HD12 H N N 174 ILE HD13 H N N 175 ILE HXT H N N 176 LEU N N N N 177 LEU CA C N S 178 LEU C C N N 179 LEU O O N N 180 LEU CB C N N 181 LEU CG C N N 182 LEU CD1 C N N 183 LEU CD2 C N N 184 LEU OXT O N N 185 LEU H H N N 186 LEU H2 H N N 187 LEU HA H N N 188 LEU HB2 H N N 189 LEU HB3 H N N 190 LEU HG H N N 191 LEU HD11 H N N 192 LEU HD12 H N N 193 LEU HD13 H N N 194 LEU HD21 H N N 195 LEU HD22 H N N 196 LEU HD23 H N N 197 LEU HXT H N N 198 LYS N N N N 199 LYS CA C N S 200 LYS C C N N 201 LYS O O N N 202 LYS CB C N N 203 LYS CG C N N 204 LYS CD C N N 205 LYS CE C N N 206 LYS NZ N N N 207 LYS OXT O N N 208 LYS H H N N 209 LYS H2 H N N 210 LYS HA H N N 211 LYS HB2 H N N 212 LYS HB3 H N N 213 LYS HG2 H N N 214 LYS HG3 H N N 215 LYS HD2 H N N 216 LYS HD3 H N N 217 LYS HE2 H N N 218 LYS HE3 H N N 219 LYS HZ1 H N N 220 LYS HZ2 H N N 221 LYS HZ3 H N N 222 LYS HXT H N N 223 NH2 N N N N 224 NH2 HN1 H N N 225 NH2 HN2 H N N 226 PRO N N N N 227 PRO CA C N S 228 PRO C C N N 229 PRO O O N N 230 PRO CB C N N 231 PRO CG C N N 232 PRO CD C N N 233 PRO OXT O N N 234 PRO H H N N 235 PRO HA H N N 236 PRO HB2 H N N 237 PRO HB3 H N N 238 PRO HG2 H N N 239 PRO HG3 H N N 240 PRO HD2 H N N 241 PRO HD3 H N N 242 PRO HXT H N N 243 SER N N N N 244 SER CA C N S 245 SER C C N N 246 SER O O N N 247 SER CB C N N 248 SER OG O N N 249 SER OXT O N N 250 SER H H N N 251 SER H2 H N N 252 SER HA H N N 253 SER HB2 H N N 254 SER HB3 H N N 255 SER HG H N N 256 SER HXT H N N 257 THR N N N N 258 THR CA C N S 259 THR C C N N 260 THR O O N N 261 THR CB C N R 262 THR OG1 O N N 263 THR CG2 C N N 264 THR OXT O N N 265 THR H H N N 266 THR H2 H N N 267 THR HA H N N 268 THR HB H N N 269 THR HG1 H N N 270 THR HG21 H N N 271 THR HG22 H N N 272 THR HG23 H N N 273 THR HXT H N N 274 TRP N N N N 275 TRP CA C N S 276 TRP C C N N 277 TRP O O N N 278 TRP CB C N N 279 TRP CG C Y N 280 TRP CD1 C Y N 281 TRP CD2 C Y N 282 TRP NE1 N Y N 283 TRP CE2 C Y N 284 TRP CE3 C Y N 285 TRP CZ2 C Y N 286 TRP CZ3 C Y N 287 TRP CH2 C Y N 288 TRP OXT O N N 289 TRP H H N N 290 TRP H2 H N N 291 TRP HA H N N 292 TRP HB2 H N N 293 TRP HB3 H N N 294 TRP HD1 H N N 295 TRP HE1 H N N 296 TRP HE3 H N N 297 TRP HZ2 H N N 298 TRP HZ3 H N N 299 TRP HH2 H N N 300 TRP HXT H N N 301 TYR N N N N 302 TYR CA C N S 303 TYR C C N N 304 TYR O O N N 305 TYR CB C N N 306 TYR CG C Y N 307 TYR CD1 C Y N 308 TYR CD2 C Y N 309 TYR CE1 C Y N 310 TYR CE2 C Y N 311 TYR CZ C Y N 312 TYR OH O N N 313 TYR OXT O N N 314 TYR H H N N 315 TYR H2 H N N 316 TYR HA H N N 317 TYR HB2 H N N 318 TYR HB3 H N N 319 TYR HD1 H N N 320 TYR HD2 H N N 321 TYR HE1 H N N 322 TYR HE2 H N N 323 TYR HH H N N 324 TYR HXT H N N 325 VAL N N N N 326 VAL CA C N S 327 VAL C C N N 328 VAL O O N N 329 VAL CB C N N 330 VAL CG1 C N N 331 VAL CG2 C N N 332 VAL OXT O N N 333 VAL H H N N 334 VAL H2 H N N 335 VAL HA H N N 336 VAL HB H N N 337 VAL HG11 H N N 338 VAL HG12 H N N 339 VAL HG13 H N N 340 VAL HG21 H N N 341 VAL HG22 H N N 342 VAL HG23 H N N 343 VAL HXT H N N 344 XCP N N N N 345 XCP CB C N S 346 XCP CG C N N 347 XCP CD C N N 348 XCP CE C N N 349 XCP CA C N S 350 XCP C C N N 351 XCP O O N N 352 XCP H H N N 353 XCP HB H N N 354 XCP HG H N N 355 XCP HGA H N N 356 XCP HD H N N 357 XCP HDA H N N 358 XCP HE H N N 359 XCP HEA H N N 360 XCP HA H N N 361 XCP H2 H N N 362 XCP OXT O N N 363 XCP HXT H N N 364 XPC N N N N 365 XPC CB C N R 366 XPC CG C N N 367 XPC ND N N N 368 XPC CE C N N 369 XPC CA C N S 370 XPC C C N N 371 XPC O O N N 372 XPC H H N N 373 XPC HB H N N 374 XPC HG H N N 375 XPC HGA H N N 376 XPC HND H N N 377 XPC HE H N N 378 XPC HEA H N N 379 XPC HA H N N 380 XPC H2 H N N 381 XPC OXT O N N 382 XPC HXT H N N 383 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 B3E N CA sing N N 76 B3E N H sing N N 77 B3E N H2 sing N N 78 B3E CA CG sing N N 79 B3E CA CB sing N N 80 B3E CA HA sing N N 81 B3E CG CD sing N N 82 B3E CG HG2 sing N N 83 B3E CG HG3 sing N N 84 B3E CD CE sing N N 85 B3E CD HD2 sing N N 86 B3E CD HD3 sing N N 87 B3E CE OF2 doub N N 88 B3E CE OF1 sing N N 89 B3E OF1 HOF1 sing N N 90 B3E CB C sing N N 91 B3E CB HB1 sing N N 92 B3E CB HB2 sing N N 93 B3E C OXT sing N N 94 B3E C O doub N N 95 B3E OXT HXT sing N N 96 GLN N CA sing N N 97 GLN N H sing N N 98 GLN N H2 sing N N 99 GLN CA C sing N N 100 GLN CA CB sing N N 101 GLN CA HA sing N N 102 GLN C O doub N N 103 GLN C OXT sing N N 104 GLN CB CG sing N N 105 GLN CB HB2 sing N N 106 GLN CB HB3 sing N N 107 GLN CG CD sing N N 108 GLN CG HG2 sing N N 109 GLN CG HG3 sing N N 110 GLN CD OE1 doub N N 111 GLN CD NE2 sing N N 112 GLN NE2 HE21 sing N N 113 GLN NE2 HE22 sing N N 114 GLN OXT HXT sing N N 115 GLU N CA sing N N 116 GLU N H sing N N 117 GLU N H2 sing N N 118 GLU CA C sing N N 119 GLU CA CB sing N N 120 GLU CA HA sing N N 121 GLU C O doub N N 122 GLU C OXT sing N N 123 GLU CB CG sing N N 124 GLU CB HB2 sing N N 125 GLU CB HB3 sing N N 126 GLU CG CD sing N N 127 GLU CG HG2 sing N N 128 GLU CG HG3 sing N N 129 GLU CD OE1 doub N N 130 GLU CD OE2 sing N N 131 GLU OE2 HE2 sing N N 132 GLU OXT HXT sing N N 133 GLY N CA sing N N 134 GLY N H sing N N 135 GLY N H2 sing N N 136 GLY CA C sing N N 137 GLY CA HA2 sing N N 138 GLY CA HA3 sing N N 139 GLY C O doub N N 140 GLY C OXT sing N N 141 GLY OXT HXT sing N N 142 HOH O H1 sing N N 143 HOH O H2 sing N N 144 ILE N CA sing N N 145 ILE N H sing N N 146 ILE N H2 sing N N 147 ILE CA C sing N N 148 ILE CA CB sing N N 149 ILE CA HA sing N N 150 ILE C O doub N N 151 ILE C OXT sing N N 152 ILE CB CG1 sing N N 153 ILE CB CG2 sing N N 154 ILE CB HB sing N N 155 ILE CG1 CD1 sing N N 156 ILE CG1 HG12 sing N N 157 ILE CG1 HG13 sing N N 158 ILE CG2 HG21 sing N N 159 ILE CG2 HG22 sing N N 160 ILE CG2 HG23 sing N N 161 ILE CD1 HD11 sing N N 162 ILE CD1 HD12 sing N N 163 ILE CD1 HD13 sing N N 164 ILE OXT HXT sing N N 165 LEU N CA sing N N 166 LEU N H sing N N 167 LEU N H2 sing N N 168 LEU CA C sing N N 169 LEU CA CB sing N N 170 LEU CA HA sing N N 171 LEU C O doub N N 172 LEU C OXT sing N N 173 LEU CB CG sing N N 174 LEU CB HB2 sing N N 175 LEU CB HB3 sing N N 176 LEU CG CD1 sing N N 177 LEU CG CD2 sing N N 178 LEU CG HG sing N N 179 LEU CD1 HD11 sing N N 180 LEU CD1 HD12 sing N N 181 LEU CD1 HD13 sing N N 182 LEU CD2 HD21 sing N N 183 LEU CD2 HD22 sing N N 184 LEU CD2 HD23 sing N N 185 LEU OXT HXT sing N N 186 LYS N CA sing N N 187 LYS N H sing N N 188 LYS N H2 sing N N 189 LYS CA C sing N N 190 LYS CA CB sing N N 191 LYS CA HA sing N N 192 LYS C O doub N N 193 LYS C OXT sing N N 194 LYS CB CG sing N N 195 LYS CB HB2 sing N N 196 LYS CB HB3 sing N N 197 LYS CG CD sing N N 198 LYS CG HG2 sing N N 199 LYS CG HG3 sing N N 200 LYS CD CE sing N N 201 LYS CD HD2 sing N N 202 LYS CD HD3 sing N N 203 LYS CE NZ sing N N 204 LYS CE HE2 sing N N 205 LYS CE HE3 sing N N 206 LYS NZ HZ1 sing N N 207 LYS NZ HZ2 sing N N 208 LYS NZ HZ3 sing N N 209 LYS OXT HXT sing N N 210 NH2 N HN1 sing N N 211 NH2 N HN2 sing N N 212 PRO N CA sing N N 213 PRO N CD sing N N 214 PRO N H sing N N 215 PRO CA C sing N N 216 PRO CA CB sing N N 217 PRO CA HA sing N N 218 PRO C O doub N N 219 PRO C OXT sing N N 220 PRO CB CG sing N N 221 PRO CB HB2 sing N N 222 PRO CB HB3 sing N N 223 PRO CG CD sing N N 224 PRO CG HG2 sing N N 225 PRO CG HG3 sing N N 226 PRO CD HD2 sing N N 227 PRO CD HD3 sing N N 228 PRO OXT HXT sing N N 229 SER N CA sing N N 230 SER N H sing N N 231 SER N H2 sing N N 232 SER CA C sing N N 233 SER CA CB sing N N 234 SER CA HA sing N N 235 SER C O doub N N 236 SER C OXT sing N N 237 SER CB OG sing N N 238 SER CB HB2 sing N N 239 SER CB HB3 sing N N 240 SER OG HG sing N N 241 SER OXT HXT sing N N 242 THR N CA sing N N 243 THR N H sing N N 244 THR N H2 sing N N 245 THR CA C sing N N 246 THR CA CB sing N N 247 THR CA HA sing N N 248 THR C O doub N N 249 THR C OXT sing N N 250 THR CB OG1 sing N N 251 THR CB CG2 sing N N 252 THR CB HB sing N N 253 THR OG1 HG1 sing N N 254 THR CG2 HG21 sing N N 255 THR CG2 HG22 sing N N 256 THR CG2 HG23 sing N N 257 THR OXT HXT sing N N 258 TRP N CA sing N N 259 TRP N H sing N N 260 TRP N H2 sing N N 261 TRP CA C sing N N 262 TRP CA CB sing N N 263 TRP CA HA sing N N 264 TRP C O doub N N 265 TRP C OXT sing N N 266 TRP CB CG sing N N 267 TRP CB HB2 sing N N 268 TRP CB HB3 sing N N 269 TRP CG CD1 doub Y N 270 TRP CG CD2 sing Y N 271 TRP CD1 NE1 sing Y N 272 TRP CD1 HD1 sing N N 273 TRP CD2 CE2 doub Y N 274 TRP CD2 CE3 sing Y N 275 TRP NE1 CE2 sing Y N 276 TRP NE1 HE1 sing N N 277 TRP CE2 CZ2 sing Y N 278 TRP CE3 CZ3 doub Y N 279 TRP CE3 HE3 sing N N 280 TRP CZ2 CH2 doub Y N 281 TRP CZ2 HZ2 sing N N 282 TRP CZ3 CH2 sing Y N 283 TRP CZ3 HZ3 sing N N 284 TRP CH2 HH2 sing N N 285 TRP OXT HXT sing N N 286 TYR N CA sing N N 287 TYR N H sing N N 288 TYR N H2 sing N N 289 TYR CA C sing N N 290 TYR CA CB sing N N 291 TYR CA HA sing N N 292 TYR C O doub N N 293 TYR C OXT sing N N 294 TYR CB CG sing N N 295 TYR CB HB2 sing N N 296 TYR CB HB3 sing N N 297 TYR CG CD1 doub Y N 298 TYR CG CD2 sing Y N 299 TYR CD1 CE1 sing Y N 300 TYR CD1 HD1 sing N N 301 TYR CD2 CE2 doub Y N 302 TYR CD2 HD2 sing N N 303 TYR CE1 CZ doub Y N 304 TYR CE1 HE1 sing N N 305 TYR CE2 CZ sing Y N 306 TYR CE2 HE2 sing N N 307 TYR CZ OH sing N N 308 TYR OH HH sing N N 309 TYR OXT HXT sing N N 310 VAL N CA sing N N 311 VAL N H sing N N 312 VAL N H2 sing N N 313 VAL CA C sing N N 314 VAL CA CB sing N N 315 VAL CA HA sing N N 316 VAL C O doub N N 317 VAL C OXT sing N N 318 VAL CB CG1 sing N N 319 VAL CB CG2 sing N N 320 VAL CB HB sing N N 321 VAL CG1 HG11 sing N N 322 VAL CG1 HG12 sing N N 323 VAL CG1 HG13 sing N N 324 VAL CG2 HG21 sing N N 325 VAL CG2 HG22 sing N N 326 VAL CG2 HG23 sing N N 327 VAL OXT HXT sing N N 328 XCP N H sing N N 329 XCP N H2 sing N N 330 XCP CB N sing N N 331 XCP CB CG sing N N 332 XCP CG HGA sing N N 333 XCP CD CG sing N N 334 XCP CD HD sing N N 335 XCP CE CD sing N N 336 XCP CE CA sing N N 337 XCP CE HE sing N N 338 XCP CA CB sing N N 339 XCP CA HA sing N N 340 XCP C CA sing N N 341 XCP C OXT sing N N 342 XCP O C doub N N 343 XCP HB CB sing N N 344 XCP HG CG sing N N 345 XCP HDA CD sing N N 346 XCP HEA CE sing N N 347 XCP OXT HXT sing N N 348 XPC N H sing N N 349 XPC N H2 sing N N 350 XPC CB N sing N N 351 XPC CB CG sing N N 352 XPC CG HGA sing N N 353 XPC ND CG sing N N 354 XPC ND HND sing N N 355 XPC CE ND sing N N 356 XPC CE HE sing N N 357 XPC CE CA sing N N 358 XPC CA CB sing N N 359 XPC CA HA sing N N 360 XPC C CA sing N N 361 XPC C OXT sing N N 362 XPC O C doub N N 363 XPC HB CB sing N N 364 XPC HG CG sing N N 365 XPC HEA CE sing N N 366 XPC OXT HXT sing N N 367 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' 1F32GM122263 1 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' 1R01AI114736 2 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1ZTM _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'assay for oligomerization' _pdbx_struct_assembly_auth_evidence.details 'Formation of helical assembly detected by circular dichroism spectroscopy.' # _space_group.name_H-M_alt 'R 3 :H' _space_group.name_Hall 'A 3' _space_group.IT_number 146 _space_group.crystal_system trigonal _space_group.id 1 #