data_6VKM # _entry.id 6VKM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6VKM pdb_00006vkm 10.2210/pdb6vkm/pdb WWPDB D_1000246564 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6VKM _pdbx_database_status.recvd_initial_deposition_date 2020-01-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Gilman, M.S.A.' 1 ? 'Rutten, L.' 2 ? 'Langedijk, J.P.M.' 3 ? 'McLellan, J.S.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Cell Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2211-1247 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 30 _citation.language ? _citation.page_first 4540 _citation.page_last 4550.e3 _citation.title 'Structure-Based Design of Prefusion-Stabilized Filovirus Glycoprotein Trimers.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.celrep.2020.03.025 _citation.pdbx_database_id_PubMed 32234486 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Rutten, L.' 1 ? primary 'Gilman, M.S.A.' 2 ? primary 'Blokland, S.' 3 ? primary 'Juraszek, J.' 4 ? primary 'McLellan, J.S.' 5 ? primary 'Langedijk, J.P.M.' 6 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 6VKM _cell.details ? _cell.formula_units_Z ? _cell.length_a 113.110 _cell.length_a_esd ? _cell.length_b 113.110 _cell.length_b_esd ? _cell.length_c 393.180 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 18 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VKM _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Virion spike glycoprotein' 55446.449 1 ? 'T42A/T577P/K588F,deletion of residues 320-476' ? ? 2 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ? 3 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGVTGILQLPRDRFKRTSFFLWVIILFQRTFSIPLGVIHNSALQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVP SVTKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFF LYDRLASTVIYRGTTFAEGVVAFLILPQAKKDFFSSHPLREPVNATEDPSSGYYSTTIRYQATGFGTNETEYLFEVDNLT YVQLESRFTPQFLLQLNETIYASGKRSNTTGKLIWKVNPEIDTTIGEWAFWETKKNLTRKIRSEELSFTAVSNSASSGKL GLITNTIAGVAGLITGGRRTRREVIVNAQPKCNPNLHYWTTQDEGAAIGLAWIPYFGPAAEGIYTEGLMHNQDGLICGLR QLANETTQALQLFLRATPELRTFSILNRFAIDFLLQRWGGTCHILGPDCCIEPHDWTKNITDKIDQIIHDFVDKTLPDQG DNDNWWTGHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MGVTGILQLPRDRFKRTSFFLWVIILFQRTFSIPLGVIHNSALQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVP SVTKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFF LYDRLASTVIYRGTTFAEGVVAFLILPQAKKDFFSSHPLREPVNATEDPSSGYYSTTIRYQATGFGTNETEYLFEVDNLT YVQLESRFTPQFLLQLNETIYASGKRSNTTGKLIWKVNPEIDTTIGEWAFWETKKNLTRKIRSEELSFTAVSNSASSGKL GLITNTIAGVAGLITGGRRTRREVIVNAQPKCNPNLHYWTTQDEGAAIGLAWIPYFGPAAEGIYTEGLMHNQDGLICGLR QLANETTQALQLFLRATPELRTFSILNRFAIDFLLQRWGGTCHILGPDCCIEPHDWTKNITDKIDQIIHDFVDKTLPDQG DNDNWWTGHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 VAL n 1 4 THR n 1 5 GLY n 1 6 ILE n 1 7 LEU n 1 8 GLN n 1 9 LEU n 1 10 PRO n 1 11 ARG n 1 12 ASP n 1 13 ARG n 1 14 PHE n 1 15 LYS n 1 16 ARG n 1 17 THR n 1 18 SER n 1 19 PHE n 1 20 PHE n 1 21 LEU n 1 22 TRP n 1 23 VAL n 1 24 ILE n 1 25 ILE n 1 26 LEU n 1 27 PHE n 1 28 GLN n 1 29 ARG n 1 30 THR n 1 31 PHE n 1 32 SER n 1 33 ILE n 1 34 PRO n 1 35 LEU n 1 36 GLY n 1 37 VAL n 1 38 ILE n 1 39 HIS n 1 40 ASN n 1 41 SER n 1 42 ALA n 1 43 LEU n 1 44 GLN n 1 45 VAL n 1 46 SER n 1 47 ASP n 1 48 VAL n 1 49 ASP n 1 50 LYS n 1 51 LEU n 1 52 VAL n 1 53 CYS n 1 54 ARG n 1 55 ASP n 1 56 LYS n 1 57 LEU n 1 58 SER n 1 59 SER n 1 60 THR n 1 61 ASN n 1 62 GLN n 1 63 LEU n 1 64 ARG n 1 65 SER n 1 66 VAL n 1 67 GLY n 1 68 LEU n 1 69 ASN n 1 70 LEU n 1 71 GLU n 1 72 GLY n 1 73 ASN n 1 74 GLY n 1 75 VAL n 1 76 ALA n 1 77 THR n 1 78 ASP n 1 79 VAL n 1 80 PRO n 1 81 SER n 1 82 VAL n 1 83 THR n 1 84 LYS n 1 85 ARG n 1 86 TRP n 1 87 GLY n 1 88 PHE n 1 89 ARG n 1 90 SER n 1 91 GLY n 1 92 VAL n 1 93 PRO n 1 94 PRO n 1 95 LYS n 1 96 VAL n 1 97 VAL n 1 98 ASN n 1 99 TYR n 1 100 GLU n 1 101 ALA n 1 102 GLY n 1 103 GLU n 1 104 TRP n 1 105 ALA n 1 106 GLU n 1 107 ASN n 1 108 CYS n 1 109 TYR n 1 110 ASN n 1 111 LEU n 1 112 GLU n 1 113 ILE n 1 114 LYS n 1 115 LYS n 1 116 PRO n 1 117 ASP n 1 118 GLY n 1 119 SER n 1 120 GLU n 1 121 CYS n 1 122 LEU n 1 123 PRO n 1 124 ALA n 1 125 ALA n 1 126 PRO n 1 127 ASP n 1 128 GLY n 1 129 ILE n 1 130 ARG n 1 131 GLY n 1 132 PHE n 1 133 PRO n 1 134 ARG n 1 135 CYS n 1 136 ARG n 1 137 TYR n 1 138 VAL n 1 139 HIS n 1 140 LYS n 1 141 VAL n 1 142 SER n 1 143 GLY n 1 144 THR n 1 145 GLY n 1 146 PRO n 1 147 CYS n 1 148 ALA n 1 149 GLY n 1 150 ASP n 1 151 PHE n 1 152 ALA n 1 153 PHE n 1 154 HIS n 1 155 LYS n 1 156 GLU n 1 157 GLY n 1 158 ALA n 1 159 PHE n 1 160 PHE n 1 161 LEU n 1 162 TYR n 1 163 ASP n 1 164 ARG n 1 165 LEU n 1 166 ALA n 1 167 SER n 1 168 THR n 1 169 VAL n 1 170 ILE n 1 171 TYR n 1 172 ARG n 1 173 GLY n 1 174 THR n 1 175 THR n 1 176 PHE n 1 177 ALA n 1 178 GLU n 1 179 GLY n 1 180 VAL n 1 181 VAL n 1 182 ALA n 1 183 PHE n 1 184 LEU n 1 185 ILE n 1 186 LEU n 1 187 PRO n 1 188 GLN n 1 189 ALA n 1 190 LYS n 1 191 LYS n 1 192 ASP n 1 193 PHE n 1 194 PHE n 1 195 SER n 1 196 SER n 1 197 HIS n 1 198 PRO n 1 199 LEU n 1 200 ARG n 1 201 GLU n 1 202 PRO n 1 203 VAL n 1 204 ASN n 1 205 ALA n 1 206 THR n 1 207 GLU n 1 208 ASP n 1 209 PRO n 1 210 SER n 1 211 SER n 1 212 GLY n 1 213 TYR n 1 214 TYR n 1 215 SER n 1 216 THR n 1 217 THR n 1 218 ILE n 1 219 ARG n 1 220 TYR n 1 221 GLN n 1 222 ALA n 1 223 THR n 1 224 GLY n 1 225 PHE n 1 226 GLY n 1 227 THR n 1 228 ASN n 1 229 GLU n 1 230 THR n 1 231 GLU n 1 232 TYR n 1 233 LEU n 1 234 PHE n 1 235 GLU n 1 236 VAL n 1 237 ASP n 1 238 ASN n 1 239 LEU n 1 240 THR n 1 241 TYR n 1 242 VAL n 1 243 GLN n 1 244 LEU n 1 245 GLU n 1 246 SER n 1 247 ARG n 1 248 PHE n 1 249 THR n 1 250 PRO n 1 251 GLN n 1 252 PHE n 1 253 LEU n 1 254 LEU n 1 255 GLN n 1 256 LEU n 1 257 ASN n 1 258 GLU n 1 259 THR n 1 260 ILE n 1 261 TYR n 1 262 ALA n 1 263 SER n 1 264 GLY n 1 265 LYS n 1 266 ARG n 1 267 SER n 1 268 ASN n 1 269 THR n 1 270 THR n 1 271 GLY n 1 272 LYS n 1 273 LEU n 1 274 ILE n 1 275 TRP n 1 276 LYS n 1 277 VAL n 1 278 ASN n 1 279 PRO n 1 280 GLU n 1 281 ILE n 1 282 ASP n 1 283 THR n 1 284 THR n 1 285 ILE n 1 286 GLY n 1 287 GLU n 1 288 TRP n 1 289 ALA n 1 290 PHE n 1 291 TRP n 1 292 GLU n 1 293 THR n 1 294 LYS n 1 295 LYS n 1 296 ASN n 1 297 LEU n 1 298 THR n 1 299 ARG n 1 300 LYS n 1 301 ILE n 1 302 ARG n 1 303 SER n 1 304 GLU n 1 305 GLU n 1 306 LEU n 1 307 SER n 1 308 PHE n 1 309 THR n 1 310 ALA n 1 311 VAL n 1 312 SER n 1 313 ASN n 1 314 SER n 1 315 ALA n 1 316 SER n 1 317 SER n 1 318 GLY n 1 319 LYS n 1 320 LEU n 1 321 GLY n 1 322 LEU n 1 323 ILE n 1 324 THR n 1 325 ASN n 1 326 THR n 1 327 ILE n 1 328 ALA n 1 329 GLY n 1 330 VAL n 1 331 ALA n 1 332 GLY n 1 333 LEU n 1 334 ILE n 1 335 THR n 1 336 GLY n 1 337 GLY n 1 338 ARG n 1 339 ARG n 1 340 THR n 1 341 ARG n 1 342 ARG n 1 343 GLU n 1 344 VAL n 1 345 ILE n 1 346 VAL n 1 347 ASN n 1 348 ALA n 1 349 GLN n 1 350 PRO n 1 351 LYS n 1 352 CYS n 1 353 ASN n 1 354 PRO n 1 355 ASN n 1 356 LEU n 1 357 HIS n 1 358 TYR n 1 359 TRP n 1 360 THR n 1 361 THR n 1 362 GLN n 1 363 ASP n 1 364 GLU n 1 365 GLY n 1 366 ALA n 1 367 ALA n 1 368 ILE n 1 369 GLY n 1 370 LEU n 1 371 ALA n 1 372 TRP n 1 373 ILE n 1 374 PRO n 1 375 TYR n 1 376 PHE n 1 377 GLY n 1 378 PRO n 1 379 ALA n 1 380 ALA n 1 381 GLU n 1 382 GLY n 1 383 ILE n 1 384 TYR n 1 385 THR n 1 386 GLU n 1 387 GLY n 1 388 LEU n 1 389 MET n 1 390 HIS n 1 391 ASN n 1 392 GLN n 1 393 ASP n 1 394 GLY n 1 395 LEU n 1 396 ILE n 1 397 CYS n 1 398 GLY n 1 399 LEU n 1 400 ARG n 1 401 GLN n 1 402 LEU n 1 403 ALA n 1 404 ASN n 1 405 GLU n 1 406 THR n 1 407 THR n 1 408 GLN n 1 409 ALA n 1 410 LEU n 1 411 GLN n 1 412 LEU n 1 413 PHE n 1 414 LEU n 1 415 ARG n 1 416 ALA n 1 417 THR n 1 418 PRO n 1 419 GLU n 1 420 LEU n 1 421 ARG n 1 422 THR n 1 423 PHE n 1 424 SER n 1 425 ILE n 1 426 LEU n 1 427 ASN n 1 428 ARG n 1 429 PHE n 1 430 ALA n 1 431 ILE n 1 432 ASP n 1 433 PHE n 1 434 LEU n 1 435 LEU n 1 436 GLN n 1 437 ARG n 1 438 TRP n 1 439 GLY n 1 440 GLY n 1 441 THR n 1 442 CYS n 1 443 HIS n 1 444 ILE n 1 445 LEU n 1 446 GLY n 1 447 PRO n 1 448 ASP n 1 449 CYS n 1 450 CYS n 1 451 ILE n 1 452 GLU n 1 453 PRO n 1 454 HIS n 1 455 ASP n 1 456 TRP n 1 457 THR n 1 458 LYS n 1 459 ASN n 1 460 ILE n 1 461 THR n 1 462 ASP n 1 463 LYS n 1 464 ILE n 1 465 ASP n 1 466 GLN n 1 467 ILE n 1 468 ILE n 1 469 HIS n 1 470 ASP n 1 471 PHE n 1 472 VAL n 1 473 ASP n 1 474 LYS n 1 475 THR n 1 476 LEU n 1 477 PRO n 1 478 ASP n 1 479 GLN n 1 480 GLY n 1 481 ASP n 1 482 ASN n 1 483 ASP n 1 484 ASN n 1 485 TRP n 1 486 TRP n 1 487 THR n 1 488 GLY n 1 489 HIS n 1 490 HIS n 1 491 HIS n 1 492 HIS n 1 493 HIS n 1 494 HIS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 313 ? ? GP ? ? ? ? ? ? 'Zaire ebolavirus' 186538 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? Expi293F ? ? ? ? ? ? ? ? ? ? ? ? 1 2 sample 'Biological sequence' 314 494 ? ? GP ? ? ? ? ? ? 'Zaire ebolavirus' 186538 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? Expi293F ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP A0A2I4PEY8_9MONO A0A2I4PEY8 ? 1 ;MGVTGILQLPRDRFKRTSFFLWVIILFQRTFSIPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVP SVTKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFF LYDRLASTVIYRGTTFAEGVVAFLILPQAKKDFFSSHPLREPVNATEDPSSGYYSTTIRYQATGFGTNETEYLFEVDNLT YVQLESRFTPQFLLQLNETIYASGKRSNTTGKLIWKVNPEIDTTIGEWAFWETKKNLTRKIRSEELSFTAVSN ; 1 2 UNP A0A0E3XL33_9MONO A0A0E3XL33 ? 1 ;SASSGKLGLITNTIAGVAGLITGGRRTRREVIVNAQPKCNPNLHYWTTQDEGAAIGLAWIPYFGPAAEGIYTEGLMHNQD GLICGLRQLANETTQALQLFLRATTELRTFSILNRKAIDFLLQRWGGTCHILGPDCCIEPHDWTKNITDKIDQIIHDFVD KTLPDQGDNDNWWTG ; 473 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6VKM A 1 ? 313 ? A0A2I4PEY8 1 ? 313 ? 1 472 2 2 6VKM A 314 ? 488 ? A0A0E3XL33 473 ? 647 ? 473 647 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6VKM ALA A 42 ? UNP A0A2I4PEY8 THR 42 'engineered mutation' 42 1 2 6VKM PRO A 418 ? UNP A0A0E3XL33 THR 577 'engineered mutation' 577 2 2 6VKM PHE A 429 ? UNP A0A0E3XL33 LYS 588 'engineered mutation' 588 3 2 6VKM HIS A 489 ? UNP A0A0E3XL33 ? ? 'expression tag' 648 4 2 6VKM HIS A 490 ? UNP A0A0E3XL33 ? ? 'expression tag' 649 5 2 6VKM HIS A 491 ? UNP A0A0E3XL33 ? ? 'expression tag' 650 6 2 6VKM HIS A 492 ? UNP A0A0E3XL33 ? ? 'expression tag' 651 7 2 6VKM HIS A 493 ? UNP A0A0E3XL33 ? ? 'expression tag' 652 8 2 6VKM HIS A 494 ? UNP A0A0E3XL33 ? ? 'expression tag' 653 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6VKM _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 4.36 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 71.82 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.2 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '9.8% PEG 6000, 0.1 M Sodium citrate pH 5.2, 3% glycerol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 80 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 X 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-10-26 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97918 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6VKM _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.500 _reflns.d_resolution_low 47.530 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 10491 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 84.700 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.300 _reflns.pdbx_Rmerge_I_obs 0.346 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 3.400 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects 3 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.391 _reflns.pdbx_Rpim_I_all 0.177 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 45250 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.913 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 3.500 3.830 ? ? 10985 ? ? ? 2527 86.700 ? ? ? ? 0.743 ? ? ? ? ? ? ? ? 4.300 ? ? ? 2.000 0.838 0.378 ? 1 1 0.564 ? ? 8.570 47.530 ? ? 3273 ? ? ? 727 80.600 ? ? ? ? 0.156 ? ? ? ? ? ? ? ? 4.500 ? ? ? 6.000 0.174 0.076 ? 2 1 0.972 ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 130.140 _refine.B_iso_mean 62.1766 _refine.B_iso_min 33.850 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6VKM _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.5000 _refine.ls_d_res_low 47.53 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 10491 _refine.ls_number_reflns_R_free 525 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 82.9700 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2849 _refine.ls_R_factor_R_free 0.3031 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2839 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5JQ3 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 30.8900 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.5300 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 3.5000 _refine_hist.d_res_low 47.53 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2815 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 353 _refine_hist.pdbx_B_iso_mean_ligand 64.79 _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2773 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 42 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 3.5001 3.8522 . . 121 2519 85.0000 . . . 0.3312 0.0000 0.3108 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.8522 4.4093 . . 134 2482 84.0000 . . . 0.3462 0.0000 0.2822 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.4093 5.5539 . . 132 2484 83.0000 . . . 0.2786 0.0000 0.2701 . . . . . . . . . . . 'X-RAY DIFFRACTION' 5.5539 47.53 . . 138 2481 80.0000 . . . 0.2774 0.0000 0.2816 . . . . . . . . . . . # _struct.entry_id 6VKM _struct.title 'Crystal Structure of Stabilized GP from Makona Variant of Ebola Virus' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6VKM _struct_keywords.text 'virus, glycoprotein, fusion, trimer, prefusion, EBOV, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 59 ? ASN A 61 ? SER A 59 ASN A 61 5 ? 3 HELX_P HELX_P2 AA2 GLU A 71 ? GLY A 74 ? GLU A 71 GLY A 74 5 ? 4 HELX_P HELX_P3 AA3 ASP A 78 ? THR A 83 ? ASP A 78 THR A 83 1 ? 6 HELX_P HELX_P4 AA4 THR A 249 ? SER A 263 ? THR A 249 SER A 263 1 ? 15 HELX_P HELX_P5 AA5 ASN A 391 ? ASP A 393 ? ASN A 550 ASP A 552 5 ? 3 HELX_P HELX_P6 AA6 GLY A 394 ? THR A 417 ? GLY A 553 THR A 576 1 ? 24 HELX_P HELX_P7 AA7 SER A 424 ? GLY A 439 ? SER A 583 GLY A 598 1 ? 16 HELX_P HELX_P8 AA8 PRO A 453 ? THR A 461 ? PRO A 612 THR A 620 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 53 SG ? ? ? 1_555 A CYS 450 SG ? ? A CYS 53 A CYS 609 1_555 ? ? ? ? ? ? ? 2.346 ? ? disulf2 disulf ? ? A CYS 108 SG ? ? ? 1_555 A CYS 135 SG ? ? A CYS 108 A CYS 135 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf3 disulf ? ? A CYS 121 SG ? ? ? 1_555 A CYS 147 SG ? ? A CYS 121 A CYS 147 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf4 disulf ? ? A CYS 352 SG ? ? ? 1_555 A CYS 397 SG ? ? A CYS 511 A CYS 556 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf5 disulf ? ? A CYS 442 SG ? ? ? 1_555 A CYS 449 SG ? ? A CYS 601 A CYS 608 1_555 ? ? ? ? ? ? ? 2.021 ? ? covale1 covale one ? A ASN 257 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 257 A NAG 800 1_555 ? ? ? ? ? ? ? 1.442 ? N-Glycosylation covale2 covale one ? A ASN 404 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 563 B NAG 1 1_555 ? ? ? ? ? ? ? 1.449 ? N-Glycosylation covale3 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.444 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 6 ? AA3 ? 2 ? AA4 ? 3 ? AA5 ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA5 1 2 ? parallel AA5 2 3 ? parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA5 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLY A 36 ? HIS A 39 ? GLY A 36 HIS A 39 AA1 2 ALA A 42 ? VAL A 45 ? ALA A 42 VAL A 45 AA2 1 LEU A 63 ? ASN A 69 ? LEU A 63 ASN A 69 AA2 2 ALA A 177 ? ILE A 185 ? ALA A 177 ILE A 185 AA2 3 PHE A 159 ? LEU A 161 ? PHE A 159 LEU A 161 AA2 4 LEU A 165 ? SER A 167 ? LEU A 165 SER A 167 AA2 5 VAL A 96 ? ASN A 98 ? VAL A 96 ASN A 98 AA2 6 ARG A 421 ? THR A 422 ? ARG A 580 THR A 581 AA3 1 TRP A 86 ? ARG A 89 ? TRP A 86 ARG A 89 AA3 2 PHE A 151 ? HIS A 154 ? PHE A 151 HIS A 154 AA4 1 GLY A 102 ? GLU A 103 ? GLY A 102 GLU A 103 AA4 2 LEU A 356 ? THR A 361 ? LEU A 515 THR A 520 AA4 3 TYR A 384 ? MET A 389 ? TYR A 543 MET A 548 AA5 1 ALA A 105 ? LYS A 114 ? ALA A 105 LYS A 114 AA5 2 CYS A 135 ? THR A 144 ? CYS A 135 THR A 144 AA5 3 THR A 216 ? THR A 223 ? THR A 216 THR A 223 AA5 4 GLU A 231 ? GLU A 235 ? GLU A 231 GLU A 235 AA5 5 THR A 240 ? GLN A 243 ? THR A 240 GLN A 243 AA5 6 LEU A 273 ? TRP A 275 ? LEU A 273 TRP A 275 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N HIS A 39 ? N HIS A 39 O ALA A 42 ? O ALA A 42 AA2 1 2 N VAL A 66 ? N VAL A 66 O ALA A 182 ? O ALA A 182 AA2 2 3 O ALA A 177 ? O ALA A 177 N LEU A 161 ? N LEU A 161 AA2 3 4 N PHE A 160 ? N PHE A 160 O SER A 167 ? O SER A 167 AA2 4 5 O ALA A 166 ? O ALA A 166 N VAL A 97 ? N VAL A 97 AA2 5 6 N VAL A 96 ? N VAL A 96 O THR A 422 ? O THR A 581 AA3 1 2 N ARG A 89 ? N ARG A 89 O PHE A 151 ? O PHE A 151 AA4 1 2 N GLY A 102 ? N GLY A 102 O TRP A 359 ? O TRP A 518 AA4 2 3 N THR A 360 ? N THR A 519 O THR A 385 ? O THR A 544 AA5 1 2 N CYS A 108 ? N CYS A 108 O HIS A 139 ? O HIS A 139 AA5 2 3 N VAL A 138 ? N VAL A 138 O ILE A 218 ? O ILE A 218 AA5 3 4 N ARG A 219 ? N ARG A 219 O GLU A 235 ? O GLU A 235 AA5 4 5 N PHE A 234 ? N PHE A 234 O VAL A 242 ? O VAL A 242 AA5 5 6 N TYR A 241 ? N TYR A 241 O TRP A 275 ? O TRP A 275 # _atom_sites.entry_id 6VKM _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.008841 _atom_sites.fract_transf_matrix[1][2] 0.005104 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010209 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.002543 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 GLY 2 2 ? ? ? A . n A 1 3 VAL 3 3 ? ? ? A . n A 1 4 THR 4 4 ? ? ? A . n A 1 5 GLY 5 5 ? ? ? A . n A 1 6 ILE 6 6 ? ? ? A . n A 1 7 LEU 7 7 ? ? ? A . n A 1 8 GLN 8 8 ? ? ? A . n A 1 9 LEU 9 9 ? ? ? A . n A 1 10 PRO 10 10 ? ? ? A . n A 1 11 ARG 11 11 ? ? ? A . n A 1 12 ASP 12 12 ? ? ? A . n A 1 13 ARG 13 13 ? ? ? A . n A 1 14 PHE 14 14 ? ? ? A . n A 1 15 LYS 15 15 ? ? ? A . n A 1 16 ARG 16 16 ? ? ? A . n A 1 17 THR 17 17 ? ? ? A . n A 1 18 SER 18 18 ? ? ? A . n A 1 19 PHE 19 19 ? ? ? A . n A 1 20 PHE 20 20 ? ? ? A . n A 1 21 LEU 21 21 ? ? ? A . n A 1 22 TRP 22 22 ? ? ? A . n A 1 23 VAL 23 23 ? ? ? A . n A 1 24 ILE 24 24 ? ? ? A . n A 1 25 ILE 25 25 ? ? ? A . n A 1 26 LEU 26 26 ? ? ? A . n A 1 27 PHE 27 27 ? ? ? A . n A 1 28 GLN 28 28 ? ? ? A . n A 1 29 ARG 29 29 ? ? ? A . n A 1 30 THR 30 30 ? ? ? A . n A 1 31 PHE 31 31 ? ? ? A . n A 1 32 SER 32 32 ? ? ? A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 HIS 39 39 39 HIS HIS A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 GLN 44 44 44 GLN GLN A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 CYS 53 53 53 CYS CYS A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 SER 58 58 58 SER SER A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 THR 60 60 60 THR THR A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 ASN 69 69 69 ASN ASN A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 ASN 73 73 73 ASN ASN A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 ASP 78 78 78 ASP ASP A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 PRO 80 80 80 PRO PRO A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 THR 83 83 83 THR THR A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 ARG 85 85 85 ARG ARG A . n A 1 86 TRP 86 86 86 TRP TRP A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 PHE 88 88 88 PHE PHE A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 PRO 93 93 93 PRO PRO A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 LYS 95 95 95 LYS LYS A . n A 1 96 VAL 96 96 96 VAL VAL A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 TYR 99 99 99 TYR TYR A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 ALA 101 101 101 ALA ALA A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 GLU 103 103 103 GLU GLU A . n A 1 104 TRP 104 104 104 TRP TRP A . n A 1 105 ALA 105 105 105 ALA ALA A . n A 1 106 GLU 106 106 106 GLU GLU A . n A 1 107 ASN 107 107 107 ASN ASN A . n A 1 108 CYS 108 108 108 CYS CYS A . n A 1 109 TYR 109 109 109 TYR TYR A . n A 1 110 ASN 110 110 110 ASN ASN A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 GLU 112 112 112 GLU GLU A . n A 1 113 ILE 113 113 113 ILE ILE A . n A 1 114 LYS 114 114 114 LYS LYS A . n A 1 115 LYS 115 115 115 LYS LYS A . n A 1 116 PRO 116 116 116 PRO PRO A . n A 1 117 ASP 117 117 117 ASP ASP A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 SER 119 119 119 SER SER A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 CYS 121 121 121 CYS CYS A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 PRO 123 123 123 PRO PRO A . n A 1 124 ALA 124 124 124 ALA ALA A . n A 1 125 ALA 125 125 125 ALA ALA A . n A 1 126 PRO 126 126 126 PRO PRO A . n A 1 127 ASP 127 127 127 ASP ASP A . n A 1 128 GLY 128 128 128 GLY GLY A . n A 1 129 ILE 129 129 129 ILE ILE A . n A 1 130 ARG 130 130 130 ARG ARG A . n A 1 131 GLY 131 131 131 GLY GLY A . n A 1 132 PHE 132 132 132 PHE PHE A . n A 1 133 PRO 133 133 133 PRO PRO A . n A 1 134 ARG 134 134 134 ARG ARG A . n A 1 135 CYS 135 135 135 CYS CYS A . n A 1 136 ARG 136 136 136 ARG ARG A . n A 1 137 TYR 137 137 137 TYR TYR A . n A 1 138 VAL 138 138 138 VAL VAL A . n A 1 139 HIS 139 139 139 HIS HIS A . n A 1 140 LYS 140 140 140 LYS LYS A . n A 1 141 VAL 141 141 141 VAL VAL A . n A 1 142 SER 142 142 142 SER SER A . n A 1 143 GLY 143 143 143 GLY GLY A . n A 1 144 THR 144 144 144 THR THR A . n A 1 145 GLY 145 145 145 GLY GLY A . n A 1 146 PRO 146 146 146 PRO PRO A . n A 1 147 CYS 147 147 147 CYS CYS A . n A 1 148 ALA 148 148 148 ALA ALA A . n A 1 149 GLY 149 149 149 GLY GLY A . n A 1 150 ASP 150 150 150 ASP ASP A . n A 1 151 PHE 151 151 151 PHE PHE A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 PHE 153 153 153 PHE PHE A . n A 1 154 HIS 154 154 154 HIS HIS A . n A 1 155 LYS 155 155 155 LYS LYS A . n A 1 156 GLU 156 156 156 GLU GLU A . n A 1 157 GLY 157 157 157 GLY GLY A . n A 1 158 ALA 158 158 158 ALA ALA A . n A 1 159 PHE 159 159 159 PHE PHE A . n A 1 160 PHE 160 160 160 PHE PHE A . n A 1 161 LEU 161 161 161 LEU LEU A . n A 1 162 TYR 162 162 162 TYR TYR A . n A 1 163 ASP 163 163 163 ASP ASP A . n A 1 164 ARG 164 164 164 ARG ARG A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 ALA 166 166 166 ALA ALA A . n A 1 167 SER 167 167 167 SER SER A . n A 1 168 THR 168 168 168 THR THR A . n A 1 169 VAL 169 169 169 VAL VAL A . n A 1 170 ILE 170 170 170 ILE ILE A . n A 1 171 TYR 171 171 171 TYR TYR A . n A 1 172 ARG 172 172 172 ARG ARG A . n A 1 173 GLY 173 173 173 GLY GLY A . n A 1 174 THR 174 174 174 THR THR A . n A 1 175 THR 175 175 175 THR THR A . n A 1 176 PHE 176 176 176 PHE PHE A . n A 1 177 ALA 177 177 177 ALA ALA A . n A 1 178 GLU 178 178 178 GLU GLU A . n A 1 179 GLY 179 179 179 GLY GLY A . n A 1 180 VAL 180 180 180 VAL VAL A . n A 1 181 VAL 181 181 181 VAL VAL A . n A 1 182 ALA 182 182 182 ALA ALA A . n A 1 183 PHE 183 183 183 PHE PHE A . n A 1 184 LEU 184 184 184 LEU LEU A . n A 1 185 ILE 185 185 185 ILE ILE A . n A 1 186 LEU 186 186 186 LEU LEU A . n A 1 187 PRO 187 187 187 PRO PRO A . n A 1 188 GLN 188 188 188 GLN GLN A . n A 1 189 ALA 189 189 189 ALA ALA A . n A 1 190 LYS 190 190 190 LYS LYS A . n A 1 191 LYS 191 191 191 LYS LYS A . n A 1 192 ASP 192 192 192 ASP ASP A . n A 1 193 PHE 193 193 ? ? ? A . n A 1 194 PHE 194 194 ? ? ? A . n A 1 195 SER 195 195 ? ? ? A . n A 1 196 SER 196 196 ? ? ? A . n A 1 197 HIS 197 197 ? ? ? A . n A 1 198 PRO 198 198 ? ? ? A . n A 1 199 LEU 199 199 ? ? ? A . n A 1 200 ARG 200 200 ? ? ? A . n A 1 201 GLU 201 201 ? ? ? A . n A 1 202 PRO 202 202 ? ? ? A . n A 1 203 VAL 203 203 ? ? ? A . n A 1 204 ASN 204 204 ? ? ? A . n A 1 205 ALA 205 205 ? ? ? A . n A 1 206 THR 206 206 ? ? ? A . n A 1 207 GLU 207 207 ? ? ? A . n A 1 208 ASP 208 208 ? ? ? A . n A 1 209 PRO 209 209 ? ? ? A . n A 1 210 SER 210 210 ? ? ? A . n A 1 211 SER 211 211 ? ? ? A . n A 1 212 GLY 212 212 ? ? ? A . n A 1 213 TYR 213 213 ? ? ? A . n A 1 214 TYR 214 214 ? ? ? A . n A 1 215 SER 215 215 215 SER SER A . n A 1 216 THR 216 216 216 THR THR A . n A 1 217 THR 217 217 217 THR THR A . n A 1 218 ILE 218 218 218 ILE ILE A . n A 1 219 ARG 219 219 219 ARG ARG A . n A 1 220 TYR 220 220 220 TYR TYR A . n A 1 221 GLN 221 221 221 GLN GLN A . n A 1 222 ALA 222 222 222 ALA ALA A . n A 1 223 THR 223 223 223 THR THR A . n A 1 224 GLY 224 224 224 GLY GLY A . n A 1 225 PHE 225 225 225 PHE PHE A . n A 1 226 GLY 226 226 226 GLY GLY A . n A 1 227 THR 227 227 227 THR THR A . n A 1 228 ASN 228 228 228 ASN ASN A . n A 1 229 GLU 229 229 229 GLU GLU A . n A 1 230 THR 230 230 230 THR THR A . n A 1 231 GLU 231 231 231 GLU GLU A . n A 1 232 TYR 232 232 232 TYR TYR A . n A 1 233 LEU 233 233 233 LEU LEU A . n A 1 234 PHE 234 234 234 PHE PHE A . n A 1 235 GLU 235 235 235 GLU GLU A . n A 1 236 VAL 236 236 236 VAL VAL A . n A 1 237 ASP 237 237 237 ASP ASP A . n A 1 238 ASN 238 238 238 ASN ASN A . n A 1 239 LEU 239 239 239 LEU LEU A . n A 1 240 THR 240 240 240 THR THR A . n A 1 241 TYR 241 241 241 TYR TYR A . n A 1 242 VAL 242 242 242 VAL VAL A . n A 1 243 GLN 243 243 243 GLN GLN A . n A 1 244 LEU 244 244 244 LEU LEU A . n A 1 245 GLU 245 245 245 GLU GLU A . n A 1 246 SER 246 246 246 SER SER A . n A 1 247 ARG 247 247 247 ARG ARG A . n A 1 248 PHE 248 248 248 PHE PHE A . n A 1 249 THR 249 249 249 THR THR A . n A 1 250 PRO 250 250 250 PRO PRO A . n A 1 251 GLN 251 251 251 GLN GLN A . n A 1 252 PHE 252 252 252 PHE PHE A . n A 1 253 LEU 253 253 253 LEU LEU A . n A 1 254 LEU 254 254 254 LEU LEU A . n A 1 255 GLN 255 255 255 GLN GLN A . n A 1 256 LEU 256 256 256 LEU LEU A . n A 1 257 ASN 257 257 257 ASN ASN A . n A 1 258 GLU 258 258 258 GLU GLU A . n A 1 259 THR 259 259 259 THR THR A . n A 1 260 ILE 260 260 260 ILE ILE A . n A 1 261 TYR 261 261 261 TYR TYR A . n A 1 262 ALA 262 262 262 ALA ALA A . n A 1 263 SER 263 263 263 SER SER A . n A 1 264 GLY 264 264 264 GLY GLY A . n A 1 265 LYS 265 265 265 LYS LYS A . n A 1 266 ARG 266 266 266 ARG ARG A . n A 1 267 SER 267 267 267 SER SER A . n A 1 268 ASN 268 268 268 ASN ASN A . n A 1 269 THR 269 269 269 THR THR A . n A 1 270 THR 270 270 270 THR THR A . n A 1 271 GLY 271 271 271 GLY GLY A . n A 1 272 LYS 272 272 272 LYS LYS A . n A 1 273 LEU 273 273 273 LEU LEU A . n A 1 274 ILE 274 274 274 ILE ILE A . n A 1 275 TRP 275 275 275 TRP TRP A . n A 1 276 LYS 276 276 276 LYS LYS A . n A 1 277 VAL 277 277 277 VAL VAL A . n A 1 278 ASN 278 278 278 ASN ASN A . n A 1 279 PRO 279 279 279 PRO PRO A . n A 1 280 GLU 280 280 280 GLU GLU A . n A 1 281 ILE 281 281 281 ILE ILE A . n A 1 282 ASP 282 282 282 ASP ASP A . n A 1 283 THR 283 283 283 THR THR A . n A 1 284 THR 284 284 ? ? ? A . n A 1 285 ILE 285 285 ? ? ? A . n A 1 286 GLY 286 286 ? ? ? A . n A 1 287 GLU 287 287 ? ? ? A . n A 1 288 TRP 288 288 ? ? ? A . n A 1 289 ALA 289 289 289 ALA ALA A . n A 1 290 PHE 290 290 290 PHE PHE A . n A 1 291 TRP 291 291 291 TRP TRP A . n A 1 292 GLU 292 292 292 GLU GLU A . n A 1 293 THR 293 293 293 THR THR A . n A 1 294 LYS 294 453 ? ? ? A . n A 1 295 LYS 295 454 ? ? ? A . n A 1 296 ASN 296 455 ? ? ? A . n A 1 297 LEU 297 456 ? ? ? A . n A 1 298 THR 298 457 ? ? ? A . n A 1 299 ARG 299 458 ? ? ? A . n A 1 300 LYS 300 459 ? ? ? A . n A 1 301 ILE 301 460 ? ? ? A . n A 1 302 ARG 302 461 ? ? ? A . n A 1 303 SER 303 462 ? ? ? A . n A 1 304 GLU 304 463 ? ? ? A . n A 1 305 GLU 305 464 ? ? ? A . n A 1 306 LEU 306 465 ? ? ? A . n A 1 307 SER 307 466 ? ? ? A . n A 1 308 PHE 308 467 ? ? ? A . n A 1 309 THR 309 468 ? ? ? A . n A 1 310 ALA 310 469 ? ? ? A . n A 1 311 VAL 311 470 ? ? ? A . n A 1 312 SER 312 471 ? ? ? A . n A 1 313 ASN 313 472 ? ? ? A . n A 1 314 SER 314 473 ? ? ? A . n A 1 315 ALA 315 474 ? ? ? A . n A 1 316 SER 316 475 ? ? ? A . n A 1 317 SER 317 476 ? ? ? A . n A 1 318 GLY 318 477 ? ? ? A . n A 1 319 LYS 319 478 ? ? ? A . n A 1 320 LEU 320 479 ? ? ? A . n A 1 321 GLY 321 480 ? ? ? A . n A 1 322 LEU 322 481 ? ? ? A . n A 1 323 ILE 323 482 ? ? ? A . n A 1 324 THR 324 483 ? ? ? A . n A 1 325 ASN 325 484 ? ? ? A . n A 1 326 THR 326 485 ? ? ? A . n A 1 327 ILE 327 486 ? ? ? A . n A 1 328 ALA 328 487 ? ? ? A . n A 1 329 GLY 329 488 ? ? ? A . n A 1 330 VAL 330 489 ? ? ? A . n A 1 331 ALA 331 490 ? ? ? A . n A 1 332 GLY 332 491 ? ? ? A . n A 1 333 LEU 333 492 ? ? ? A . n A 1 334 ILE 334 493 ? ? ? A . n A 1 335 THR 335 494 ? ? ? A . n A 1 336 GLY 336 495 ? ? ? A . n A 1 337 GLY 337 496 ? ? ? A . n A 1 338 ARG 338 497 ? ? ? A . n A 1 339 ARG 339 498 ? ? ? A . n A 1 340 THR 340 499 ? ? ? A . n A 1 341 ARG 341 500 ? ? ? A . n A 1 342 ARG 342 501 ? ? ? A . n A 1 343 GLU 343 502 502 GLU GLU A . n A 1 344 VAL 344 503 503 VAL VAL A . n A 1 345 ILE 345 504 504 ILE ILE A . n A 1 346 VAL 346 505 505 VAL VAL A . n A 1 347 ASN 347 506 506 ASN ASN A . n A 1 348 ALA 348 507 507 ALA ALA A . n A 1 349 GLN 349 508 508 GLN GLN A . n A 1 350 PRO 350 509 509 PRO PRO A . n A 1 351 LYS 351 510 510 LYS LYS A . n A 1 352 CYS 352 511 511 CYS CYS A . n A 1 353 ASN 353 512 512 ASN ASN A . n A 1 354 PRO 354 513 513 PRO PRO A . n A 1 355 ASN 355 514 514 ASN ASN A . n A 1 356 LEU 356 515 515 LEU LEU A . n A 1 357 HIS 357 516 516 HIS HIS A . n A 1 358 TYR 358 517 517 TYR TYR A . n A 1 359 TRP 359 518 518 TRP TRP A . n A 1 360 THR 360 519 519 THR THR A . n A 1 361 THR 361 520 520 THR THR A . n A 1 362 GLN 362 521 521 GLN GLN A . n A 1 363 ASP 363 522 522 ASP ASP A . n A 1 364 GLU 364 523 523 GLU GLU A . n A 1 365 GLY 365 524 524 GLY GLY A . n A 1 366 ALA 366 525 525 ALA ALA A . n A 1 367 ALA 367 526 526 ALA ALA A . n A 1 368 ILE 368 527 527 ILE ILE A . n A 1 369 GLY 369 528 528 GLY GLY A . n A 1 370 LEU 370 529 529 LEU LEU A . n A 1 371 ALA 371 530 530 ALA ALA A . n A 1 372 TRP 372 531 531 TRP TRP A . n A 1 373 ILE 373 532 532 ILE ILE A . n A 1 374 PRO 374 533 533 PRO PRO A . n A 1 375 TYR 375 534 534 TYR TYR A . n A 1 376 PHE 376 535 535 PHE PHE A . n A 1 377 GLY 377 536 536 GLY GLY A . n A 1 378 PRO 378 537 537 PRO PRO A . n A 1 379 ALA 379 538 538 ALA ALA A . n A 1 380 ALA 380 539 539 ALA ALA A . n A 1 381 GLU 381 540 540 GLU GLU A . n A 1 382 GLY 382 541 541 GLY GLY A . n A 1 383 ILE 383 542 542 ILE ILE A . n A 1 384 TYR 384 543 543 TYR TYR A . n A 1 385 THR 385 544 544 THR THR A . n A 1 386 GLU 386 545 545 GLU GLU A . n A 1 387 GLY 387 546 546 GLY GLY A . n A 1 388 LEU 388 547 547 LEU LEU A . n A 1 389 MET 389 548 548 MET MET A . n A 1 390 HIS 390 549 549 HIS HIS A . n A 1 391 ASN 391 550 550 ASN ASN A . n A 1 392 GLN 392 551 551 GLN GLN A . n A 1 393 ASP 393 552 552 ASP ASP A . n A 1 394 GLY 394 553 553 GLY GLY A . n A 1 395 LEU 395 554 554 LEU LEU A . n A 1 396 ILE 396 555 555 ILE ILE A . n A 1 397 CYS 397 556 556 CYS CYS A . n A 1 398 GLY 398 557 557 GLY GLY A . n A 1 399 LEU 399 558 558 LEU LEU A . n A 1 400 ARG 400 559 559 ARG ARG A . n A 1 401 GLN 401 560 560 GLN GLN A . n A 1 402 LEU 402 561 561 LEU LEU A . n A 1 403 ALA 403 562 562 ALA ALA A . n A 1 404 ASN 404 563 563 ASN ASN A . n A 1 405 GLU 405 564 564 GLU GLU A . n A 1 406 THR 406 565 565 THR THR A . n A 1 407 THR 407 566 566 THR THR A . n A 1 408 GLN 408 567 567 GLN GLN A . n A 1 409 ALA 409 568 568 ALA ALA A . n A 1 410 LEU 410 569 569 LEU LEU A . n A 1 411 GLN 411 570 570 GLN GLN A . n A 1 412 LEU 412 571 571 LEU LEU A . n A 1 413 PHE 413 572 572 PHE PHE A . n A 1 414 LEU 414 573 573 LEU LEU A . n A 1 415 ARG 415 574 574 ARG ARG A . n A 1 416 ALA 416 575 575 ALA ALA A . n A 1 417 THR 417 576 576 THR THR A . n A 1 418 PRO 418 577 577 PRO PRO A . n A 1 419 GLU 419 578 578 GLU GLU A . n A 1 420 LEU 420 579 579 LEU LEU A . n A 1 421 ARG 421 580 580 ARG ARG A . n A 1 422 THR 422 581 581 THR THR A . n A 1 423 PHE 423 582 582 PHE PHE A . n A 1 424 SER 424 583 583 SER SER A . n A 1 425 ILE 425 584 584 ILE ILE A . n A 1 426 LEU 426 585 585 LEU LEU A . n A 1 427 ASN 427 586 586 ASN ASN A . n A 1 428 ARG 428 587 587 ARG ARG A . n A 1 429 PHE 429 588 588 PHE PHE A . n A 1 430 ALA 430 589 589 ALA ALA A . n A 1 431 ILE 431 590 590 ILE ILE A . n A 1 432 ASP 432 591 591 ASP ASP A . n A 1 433 PHE 433 592 592 PHE PHE A . n A 1 434 LEU 434 593 593 LEU LEU A . n A 1 435 LEU 435 594 594 LEU LEU A . n A 1 436 GLN 436 595 595 GLN GLN A . n A 1 437 ARG 437 596 596 ARG ARG A . n A 1 438 TRP 438 597 597 TRP TRP A . n A 1 439 GLY 439 598 598 GLY GLY A . n A 1 440 GLY 440 599 599 GLY GLY A . n A 1 441 THR 441 600 600 THR THR A . n A 1 442 CYS 442 601 601 CYS CYS A . n A 1 443 HIS 443 602 602 HIS HIS A . n A 1 444 ILE 444 603 603 ILE ILE A . n A 1 445 LEU 445 604 604 LEU LEU A . n A 1 446 GLY 446 605 605 GLY GLY A . n A 1 447 PRO 447 606 606 PRO PRO A . n A 1 448 ASP 448 607 607 ASP ASP A . n A 1 449 CYS 449 608 608 CYS CYS A . n A 1 450 CYS 450 609 609 CYS CYS A . n A 1 451 ILE 451 610 610 ILE ILE A . n A 1 452 GLU 452 611 611 GLU GLU A . n A 1 453 PRO 453 612 612 PRO PRO A . n A 1 454 HIS 454 613 613 HIS HIS A . n A 1 455 ASP 455 614 614 ASP ASP A . n A 1 456 TRP 456 615 615 TRP TRP A . n A 1 457 THR 457 616 616 THR THR A . n A 1 458 LYS 458 617 617 LYS LYS A . n A 1 459 ASN 459 618 618 ASN ASN A . n A 1 460 ILE 460 619 619 ILE ILE A . n A 1 461 THR 461 620 620 THR THR A . n A 1 462 ASP 462 621 ? ? ? A . n A 1 463 LYS 463 622 ? ? ? A . n A 1 464 ILE 464 623 ? ? ? A . n A 1 465 ASP 465 624 ? ? ? A . n A 1 466 GLN 466 625 ? ? ? A . n A 1 467 ILE 467 626 ? ? ? A . n A 1 468 ILE 468 627 ? ? ? A . n A 1 469 HIS 469 628 ? ? ? A . n A 1 470 ASP 470 629 ? ? ? A . n A 1 471 PHE 471 630 ? ? ? A . n A 1 472 VAL 472 631 ? ? ? A . n A 1 473 ASP 473 632 ? ? ? A . n A 1 474 LYS 474 633 ? ? ? A . n A 1 475 THR 475 634 ? ? ? A . n A 1 476 LEU 476 635 ? ? ? A . n A 1 477 PRO 477 636 ? ? ? A . n A 1 478 ASP 478 637 ? ? ? A . n A 1 479 GLN 479 638 ? ? ? A . n A 1 480 GLY 480 639 ? ? ? A . n A 1 481 ASP 481 640 ? ? ? A . n A 1 482 ASN 482 641 ? ? ? A . n A 1 483 ASP 483 642 ? ? ? A . n A 1 484 ASN 484 643 ? ? ? A . n A 1 485 TRP 485 644 ? ? ? A . n A 1 486 TRP 486 645 ? ? ? A . n A 1 487 THR 487 646 ? ? ? A . n A 1 488 GLY 488 647 ? ? ? A . n A 1 489 HIS 489 648 ? ? ? A . n A 1 490 HIS 490 649 ? ? ? A . n A 1 491 HIS 491 650 ? ? ? A . n A 1 492 HIS 492 651 ? ? ? A . n A 1 493 HIS 493 652 ? ? ? A . n A 1 494 HIS 494 653 ? ? ? A . n # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id NAG _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 800 _pdbx_nonpoly_scheme.auth_seq_num 800 _pdbx_nonpoly_scheme.pdb_mon_id NAG _pdbx_nonpoly_scheme.auth_mon_id NAG _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 15030 ? 1 MORE -35 ? 1 'SSA (A^2)' 46260 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5000000000 -0.8660254038 0.0000000000 56.5550000000 0.8660254038 -0.5000000000 0.0000000000 97.9561334221 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5000000000 0.8660254038 0.0000000000 -56.5550000000 -0.8660254038 -0.5000000000 0.0000000000 97.9561334221 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-04-15 2 'Structure model' 2 0 2020-07-29 3 'Structure model' 2 1 2023-10-11 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Data collection' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Structure summary' 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Database references' 7 3 'Structure model' 'Refinement description' 8 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' chem_comp 3 2 'Structure model' entity 4 2 'Structure model' pdbx_branch_scheme 5 2 'Structure model' pdbx_chem_comp_identifier 6 2 'Structure model' pdbx_entity_branch 7 2 'Structure model' pdbx_entity_branch_descriptor 8 2 'Structure model' pdbx_entity_branch_link 9 2 'Structure model' pdbx_entity_branch_list 10 2 'Structure model' pdbx_entity_nonpoly 11 2 'Structure model' pdbx_nonpoly_scheme 12 2 'Structure model' pdbx_struct_assembly_gen 13 2 'Structure model' struct_asym 14 2 'Structure model' struct_conn 15 2 'Structure model' struct_site 16 2 'Structure model' struct_site_gen 17 3 'Structure model' chem_comp 18 3 'Structure model' chem_comp_atom 19 3 'Structure model' chem_comp_bond 20 3 'Structure model' database_2 21 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.B_iso_or_equiv' 2 2 'Structure model' '_atom_site.Cartn_x' 3 2 'Structure model' '_atom_site.Cartn_y' 4 2 'Structure model' '_atom_site.Cartn_z' 5 2 'Structure model' '_atom_site.auth_asym_id' 6 2 'Structure model' '_atom_site.auth_seq_id' 7 2 'Structure model' '_atom_site.label_asym_id' 8 2 'Structure model' '_atom_site.label_entity_id' 9 2 'Structure model' '_chem_comp.name' 10 2 'Structure model' '_pdbx_entity_nonpoly.entity_id' 11 2 'Structure model' '_pdbx_entity_nonpoly.name' 12 2 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 13 2 'Structure model' '_struct_conn.pdbx_role' 14 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 15 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 16 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 17 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 18 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 19 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 20 3 'Structure model' '_chem_comp.pdbx_synonyms' 21 3 'Structure model' '_database_2.pdbx_DOI' 22 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -3.3199 39.8087 -40.4176 0.4753 ? 0.0191 ? 0.0370 ? 0.2660 ? 0.0112 ? 0.5117 ? 1.8987 ? 0.5159 ? -0.0764 ? 2.3330 ? -0.1009 ? 2.3550 ? 0.0078 ? -0.2825 ? -0.3355 ? 0.1923 ? -0.0613 ? 0.0220 ? 0.5194 ? -0.1489 ? 0.0397 ? 2 'X-RAY DIFFRACTION' ? refined -3.2472 53.8682 -61.8317 0.2640 ? -0.0188 ? -0.0887 ? 0.2995 ? 0.0557 ? 0.5156 ? 1.1015 ? 0.2859 ? -0.5277 ? 2.1727 ? 0.4788 ? 1.8912 ? -0.0332 ? 0.1805 ? -0.1850 ? -0.3244 ? 0.0754 ? 0.2075 ? 0.2114 ? -0.2691 ? -0.0426 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 33 ? ? A 526 ? '(chain A and resid 33:526)' 2 'X-RAY DIFFRACTION' 2 ? ? A 527 ? ? A 620 ? 'chain A and resid 527:620' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.5.32 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.14_3260 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.5.7 5 # _pdbx_entry_details.entry_id 6VKM _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 46 ? ? 174.56 145.72 2 1 ASP A 47 ? ? -148.32 -46.81 3 1 TYR A 162 ? ? -120.27 -157.33 4 1 ASP A 163 ? ? -66.65 88.85 5 1 THR A 270 ? ? -133.31 -32.79 6 1 ALA A 526 ? ? 48.13 29.30 7 1 ASN A 550 ? ? -82.14 41.45 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A GLY 2 ? A GLY 2 3 1 Y 1 A VAL 3 ? A VAL 3 4 1 Y 1 A THR 4 ? A THR 4 5 1 Y 1 A GLY 5 ? A GLY 5 6 1 Y 1 A ILE 6 ? A ILE 6 7 1 Y 1 A LEU 7 ? A LEU 7 8 1 Y 1 A GLN 8 ? A GLN 8 9 1 Y 1 A LEU 9 ? A LEU 9 10 1 Y 1 A PRO 10 ? A PRO 10 11 1 Y 1 A ARG 11 ? A ARG 11 12 1 Y 1 A ASP 12 ? A ASP 12 13 1 Y 1 A ARG 13 ? A ARG 13 14 1 Y 1 A PHE 14 ? A PHE 14 15 1 Y 1 A LYS 15 ? A LYS 15 16 1 Y 1 A ARG 16 ? A ARG 16 17 1 Y 1 A THR 17 ? A THR 17 18 1 Y 1 A SER 18 ? A SER 18 19 1 Y 1 A PHE 19 ? A PHE 19 20 1 Y 1 A PHE 20 ? A PHE 20 21 1 Y 1 A LEU 21 ? A LEU 21 22 1 Y 1 A TRP 22 ? A TRP 22 23 1 Y 1 A VAL 23 ? A VAL 23 24 1 Y 1 A ILE 24 ? A ILE 24 25 1 Y 1 A ILE 25 ? A ILE 25 26 1 Y 1 A LEU 26 ? A LEU 26 27 1 Y 1 A PHE 27 ? A PHE 27 28 1 Y 1 A GLN 28 ? A GLN 28 29 1 Y 1 A ARG 29 ? A ARG 29 30 1 Y 1 A THR 30 ? A THR 30 31 1 Y 1 A PHE 31 ? A PHE 31 32 1 Y 1 A SER 32 ? A SER 32 33 1 Y 1 A PHE 193 ? A PHE 193 34 1 Y 1 A PHE 194 ? A PHE 194 35 1 Y 1 A SER 195 ? A SER 195 36 1 Y 1 A SER 196 ? A SER 196 37 1 Y 1 A HIS 197 ? A HIS 197 38 1 Y 1 A PRO 198 ? A PRO 198 39 1 Y 1 A LEU 199 ? A LEU 199 40 1 Y 1 A ARG 200 ? A ARG 200 41 1 Y 1 A GLU 201 ? A GLU 201 42 1 Y 1 A PRO 202 ? A PRO 202 43 1 Y 1 A VAL 203 ? A VAL 203 44 1 Y 1 A ASN 204 ? A ASN 204 45 1 Y 1 A ALA 205 ? A ALA 205 46 1 Y 1 A THR 206 ? A THR 206 47 1 Y 1 A GLU 207 ? A GLU 207 48 1 Y 1 A ASP 208 ? A ASP 208 49 1 Y 1 A PRO 209 ? A PRO 209 50 1 Y 1 A SER 210 ? A SER 210 51 1 Y 1 A SER 211 ? A SER 211 52 1 Y 1 A GLY 212 ? A GLY 212 53 1 Y 1 A TYR 213 ? A TYR 213 54 1 Y 1 A TYR 214 ? A TYR 214 55 1 Y 1 A THR 284 ? A THR 284 56 1 Y 1 A ILE 285 ? A ILE 285 57 1 Y 1 A GLY 286 ? A GLY 286 58 1 Y 1 A GLU 287 ? A GLU 287 59 1 Y 1 A TRP 288 ? A TRP 288 60 1 Y 1 A LYS 453 ? A LYS 294 61 1 Y 1 A LYS 454 ? A LYS 295 62 1 Y 1 A ASN 455 ? A ASN 296 63 1 Y 1 A LEU 456 ? A LEU 297 64 1 Y 1 A THR 457 ? A THR 298 65 1 Y 1 A ARG 458 ? A ARG 299 66 1 Y 1 A LYS 459 ? A LYS 300 67 1 Y 1 A ILE 460 ? A ILE 301 68 1 Y 1 A ARG 461 ? A ARG 302 69 1 Y 1 A SER 462 ? A SER 303 70 1 Y 1 A GLU 463 ? A GLU 304 71 1 Y 1 A GLU 464 ? A GLU 305 72 1 Y 1 A LEU 465 ? A LEU 306 73 1 Y 1 A SER 466 ? A SER 307 74 1 Y 1 A PHE 467 ? A PHE 308 75 1 Y 1 A THR 468 ? A THR 309 76 1 Y 1 A ALA 469 ? A ALA 310 77 1 Y 1 A VAL 470 ? A VAL 311 78 1 Y 1 A SER 471 ? A SER 312 79 1 Y 1 A ASN 472 ? A ASN 313 80 1 Y 1 A SER 473 ? A SER 314 81 1 Y 1 A ALA 474 ? A ALA 315 82 1 Y 1 A SER 475 ? A SER 316 83 1 Y 1 A SER 476 ? A SER 317 84 1 Y 1 A GLY 477 ? A GLY 318 85 1 Y 1 A LYS 478 ? A LYS 319 86 1 Y 1 A LEU 479 ? A LEU 320 87 1 Y 1 A GLY 480 ? A GLY 321 88 1 Y 1 A LEU 481 ? A LEU 322 89 1 Y 1 A ILE 482 ? A ILE 323 90 1 Y 1 A THR 483 ? A THR 324 91 1 Y 1 A ASN 484 ? A ASN 325 92 1 Y 1 A THR 485 ? A THR 326 93 1 Y 1 A ILE 486 ? A ILE 327 94 1 Y 1 A ALA 487 ? A ALA 328 95 1 Y 1 A GLY 488 ? A GLY 329 96 1 Y 1 A VAL 489 ? A VAL 330 97 1 Y 1 A ALA 490 ? A ALA 331 98 1 Y 1 A GLY 491 ? A GLY 332 99 1 Y 1 A LEU 492 ? A LEU 333 100 1 Y 1 A ILE 493 ? A ILE 334 101 1 Y 1 A THR 494 ? A THR 335 102 1 Y 1 A GLY 495 ? A GLY 336 103 1 Y 1 A GLY 496 ? A GLY 337 104 1 Y 1 A ARG 497 ? A ARG 338 105 1 Y 1 A ARG 498 ? A ARG 339 106 1 Y 1 A THR 499 ? A THR 340 107 1 Y 1 A ARG 500 ? A ARG 341 108 1 Y 1 A ARG 501 ? A ARG 342 109 1 Y 1 A ASP 621 ? A ASP 462 110 1 Y 1 A LYS 622 ? A LYS 463 111 1 Y 1 A ILE 623 ? A ILE 464 112 1 Y 1 A ASP 624 ? A ASP 465 113 1 Y 1 A GLN 625 ? A GLN 466 114 1 Y 1 A ILE 626 ? A ILE 467 115 1 Y 1 A ILE 627 ? A ILE 468 116 1 Y 1 A HIS 628 ? A HIS 469 117 1 Y 1 A ASP 629 ? A ASP 470 118 1 Y 1 A PHE 630 ? A PHE 471 119 1 Y 1 A VAL 631 ? A VAL 472 120 1 Y 1 A ASP 632 ? A ASP 473 121 1 Y 1 A LYS 633 ? A LYS 474 122 1 Y 1 A THR 634 ? A THR 475 123 1 Y 1 A LEU 635 ? A LEU 476 124 1 Y 1 A PRO 636 ? A PRO 477 125 1 Y 1 A ASP 637 ? A ASP 478 126 1 Y 1 A GLN 638 ? A GLN 479 127 1 Y 1 A GLY 639 ? A GLY 480 128 1 Y 1 A ASP 640 ? A ASP 481 129 1 Y 1 A ASN 641 ? A ASN 482 130 1 Y 1 A ASP 642 ? A ASP 483 131 1 Y 1 A ASN 643 ? A ASN 484 132 1 Y 1 A TRP 644 ? A TRP 485 133 1 Y 1 A TRP 645 ? A TRP 486 134 1 Y 1 A THR 646 ? A THR 487 135 1 Y 1 A GLY 647 ? A GLY 488 136 1 Y 1 A HIS 648 ? A HIS 489 137 1 Y 1 A HIS 649 ? A HIS 490 138 1 Y 1 A HIS 650 ? A HIS 491 139 1 Y 1 A HIS 651 ? A HIS 492 140 1 Y 1 A HIS 652 ? A HIS 493 141 1 Y 1 A HIS 653 ? A HIS 494 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 NAG C1 C N R 247 NAG C2 C N R 248 NAG C3 C N R 249 NAG C4 C N S 250 NAG C5 C N R 251 NAG C6 C N N 252 NAG C7 C N N 253 NAG C8 C N N 254 NAG N2 N N N 255 NAG O1 O N N 256 NAG O3 O N N 257 NAG O4 O N N 258 NAG O5 O N N 259 NAG O6 O N N 260 NAG O7 O N N 261 NAG H1 H N N 262 NAG H2 H N N 263 NAG H3 H N N 264 NAG H4 H N N 265 NAG H5 H N N 266 NAG H61 H N N 267 NAG H62 H N N 268 NAG H81 H N N 269 NAG H82 H N N 270 NAG H83 H N N 271 NAG HN2 H N N 272 NAG HO1 H N N 273 NAG HO3 H N N 274 NAG HO4 H N N 275 NAG HO6 H N N 276 PHE N N N N 277 PHE CA C N S 278 PHE C C N N 279 PHE O O N N 280 PHE CB C N N 281 PHE CG C Y N 282 PHE CD1 C Y N 283 PHE CD2 C Y N 284 PHE CE1 C Y N 285 PHE CE2 C Y N 286 PHE CZ C Y N 287 PHE OXT O N N 288 PHE H H N N 289 PHE H2 H N N 290 PHE HA H N N 291 PHE HB2 H N N 292 PHE HB3 H N N 293 PHE HD1 H N N 294 PHE HD2 H N N 295 PHE HE1 H N N 296 PHE HE2 H N N 297 PHE HZ H N N 298 PHE HXT H N N 299 PRO N N N N 300 PRO CA C N S 301 PRO C C N N 302 PRO O O N N 303 PRO CB C N N 304 PRO CG C N N 305 PRO CD C N N 306 PRO OXT O N N 307 PRO H H N N 308 PRO HA H N N 309 PRO HB2 H N N 310 PRO HB3 H N N 311 PRO HG2 H N N 312 PRO HG3 H N N 313 PRO HD2 H N N 314 PRO HD3 H N N 315 PRO HXT H N N 316 SER N N N N 317 SER CA C N S 318 SER C C N N 319 SER O O N N 320 SER CB C N N 321 SER OG O N N 322 SER OXT O N N 323 SER H H N N 324 SER H2 H N N 325 SER HA H N N 326 SER HB2 H N N 327 SER HB3 H N N 328 SER HG H N N 329 SER HXT H N N 330 THR N N N N 331 THR CA C N S 332 THR C C N N 333 THR O O N N 334 THR CB C N R 335 THR OG1 O N N 336 THR CG2 C N N 337 THR OXT O N N 338 THR H H N N 339 THR H2 H N N 340 THR HA H N N 341 THR HB H N N 342 THR HG1 H N N 343 THR HG21 H N N 344 THR HG22 H N N 345 THR HG23 H N N 346 THR HXT H N N 347 TRP N N N N 348 TRP CA C N S 349 TRP C C N N 350 TRP O O N N 351 TRP CB C N N 352 TRP CG C Y N 353 TRP CD1 C Y N 354 TRP CD2 C Y N 355 TRP NE1 N Y N 356 TRP CE2 C Y N 357 TRP CE3 C Y N 358 TRP CZ2 C Y N 359 TRP CZ3 C Y N 360 TRP CH2 C Y N 361 TRP OXT O N N 362 TRP H H N N 363 TRP H2 H N N 364 TRP HA H N N 365 TRP HB2 H N N 366 TRP HB3 H N N 367 TRP HD1 H N N 368 TRP HE1 H N N 369 TRP HE3 H N N 370 TRP HZ2 H N N 371 TRP HZ3 H N N 372 TRP HH2 H N N 373 TRP HXT H N N 374 TYR N N N N 375 TYR CA C N S 376 TYR C C N N 377 TYR O O N N 378 TYR CB C N N 379 TYR CG C Y N 380 TYR CD1 C Y N 381 TYR CD2 C Y N 382 TYR CE1 C Y N 383 TYR CE2 C Y N 384 TYR CZ C Y N 385 TYR OH O N N 386 TYR OXT O N N 387 TYR H H N N 388 TYR H2 H N N 389 TYR HA H N N 390 TYR HB2 H N N 391 TYR HB3 H N N 392 TYR HD1 H N N 393 TYR HD2 H N N 394 TYR HE1 H N N 395 TYR HE2 H N N 396 TYR HH H N N 397 TYR HXT H N N 398 VAL N N N N 399 VAL CA C N S 400 VAL C C N N 401 VAL O O N N 402 VAL CB C N N 403 VAL CG1 C N N 404 VAL CG2 C N N 405 VAL OXT O N N 406 VAL H H N N 407 VAL H2 H N N 408 VAL HA H N N 409 VAL HB H N N 410 VAL HG11 H N N 411 VAL HG12 H N N 412 VAL HG13 H N N 413 VAL HG21 H N N 414 VAL HG22 H N N 415 VAL HG23 H N N 416 VAL HXT H N N 417 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 NAG C1 C2 sing N N 235 NAG C1 O1 sing N N 236 NAG C1 O5 sing N N 237 NAG C1 H1 sing N N 238 NAG C2 C3 sing N N 239 NAG C2 N2 sing N N 240 NAG C2 H2 sing N N 241 NAG C3 C4 sing N N 242 NAG C3 O3 sing N N 243 NAG C3 H3 sing N N 244 NAG C4 C5 sing N N 245 NAG C4 O4 sing N N 246 NAG C4 H4 sing N N 247 NAG C5 C6 sing N N 248 NAG C5 O5 sing N N 249 NAG C5 H5 sing N N 250 NAG C6 O6 sing N N 251 NAG C6 H61 sing N N 252 NAG C6 H62 sing N N 253 NAG C7 C8 sing N N 254 NAG C7 N2 sing N N 255 NAG C7 O7 doub N N 256 NAG C8 H81 sing N N 257 NAG C8 H82 sing N N 258 NAG C8 H83 sing N N 259 NAG N2 HN2 sing N N 260 NAG O1 HO1 sing N N 261 NAG O3 HO3 sing N N 262 NAG O4 HO4 sing N N 263 NAG O6 HO6 sing N N 264 PHE N CA sing N N 265 PHE N H sing N N 266 PHE N H2 sing N N 267 PHE CA C sing N N 268 PHE CA CB sing N N 269 PHE CA HA sing N N 270 PHE C O doub N N 271 PHE C OXT sing N N 272 PHE CB CG sing N N 273 PHE CB HB2 sing N N 274 PHE CB HB3 sing N N 275 PHE CG CD1 doub Y N 276 PHE CG CD2 sing Y N 277 PHE CD1 CE1 sing Y N 278 PHE CD1 HD1 sing N N 279 PHE CD2 CE2 doub Y N 280 PHE CD2 HD2 sing N N 281 PHE CE1 CZ doub Y N 282 PHE CE1 HE1 sing N N 283 PHE CE2 CZ sing Y N 284 PHE CE2 HE2 sing N N 285 PHE CZ HZ sing N N 286 PHE OXT HXT sing N N 287 PRO N CA sing N N 288 PRO N CD sing N N 289 PRO N H sing N N 290 PRO CA C sing N N 291 PRO CA CB sing N N 292 PRO CA HA sing N N 293 PRO C O doub N N 294 PRO C OXT sing N N 295 PRO CB CG sing N N 296 PRO CB HB2 sing N N 297 PRO CB HB3 sing N N 298 PRO CG CD sing N N 299 PRO CG HG2 sing N N 300 PRO CG HG3 sing N N 301 PRO CD HD2 sing N N 302 PRO CD HD3 sing N N 303 PRO OXT HXT sing N N 304 SER N CA sing N N 305 SER N H sing N N 306 SER N H2 sing N N 307 SER CA C sing N N 308 SER CA CB sing N N 309 SER CA HA sing N N 310 SER C O doub N N 311 SER C OXT sing N N 312 SER CB OG sing N N 313 SER CB HB2 sing N N 314 SER CB HB3 sing N N 315 SER OG HG sing N N 316 SER OXT HXT sing N N 317 THR N CA sing N N 318 THR N H sing N N 319 THR N H2 sing N N 320 THR CA C sing N N 321 THR CA CB sing N N 322 THR CA HA sing N N 323 THR C O doub N N 324 THR C OXT sing N N 325 THR CB OG1 sing N N 326 THR CB CG2 sing N N 327 THR CB HB sing N N 328 THR OG1 HG1 sing N N 329 THR CG2 HG21 sing N N 330 THR CG2 HG22 sing N N 331 THR CG2 HG23 sing N N 332 THR OXT HXT sing N N 333 TRP N CA sing N N 334 TRP N H sing N N 335 TRP N H2 sing N N 336 TRP CA C sing N N 337 TRP CA CB sing N N 338 TRP CA HA sing N N 339 TRP C O doub N N 340 TRP C OXT sing N N 341 TRP CB CG sing N N 342 TRP CB HB2 sing N N 343 TRP CB HB3 sing N N 344 TRP CG CD1 doub Y N 345 TRP CG CD2 sing Y N 346 TRP CD1 NE1 sing Y N 347 TRP CD1 HD1 sing N N 348 TRP CD2 CE2 doub Y N 349 TRP CD2 CE3 sing Y N 350 TRP NE1 CE2 sing Y N 351 TRP NE1 HE1 sing N N 352 TRP CE2 CZ2 sing Y N 353 TRP CE3 CZ3 doub Y N 354 TRP CE3 HE3 sing N N 355 TRP CZ2 CH2 doub Y N 356 TRP CZ2 HZ2 sing N N 357 TRP CZ3 CH2 sing Y N 358 TRP CZ3 HZ3 sing N N 359 TRP CH2 HH2 sing N N 360 TRP OXT HXT sing N N 361 TYR N CA sing N N 362 TYR N H sing N N 363 TYR N H2 sing N N 364 TYR CA C sing N N 365 TYR CA CB sing N N 366 TYR CA HA sing N N 367 TYR C O doub N N 368 TYR C OXT sing N N 369 TYR CB CG sing N N 370 TYR CB HB2 sing N N 371 TYR CB HB3 sing N N 372 TYR CG CD1 doub Y N 373 TYR CG CD2 sing Y N 374 TYR CD1 CE1 sing Y N 375 TYR CD1 HD1 sing N N 376 TYR CD2 CE2 doub Y N 377 TYR CD2 HD2 sing N N 378 TYR CE1 CZ doub Y N 379 TYR CE1 HE1 sing N N 380 TYR CE2 CZ sing Y N 381 TYR CE2 HE2 sing N N 382 TYR CZ OH sing N N 383 TYR OH HH sing N N 384 TYR OXT HXT sing N N 385 VAL N CA sing N N 386 VAL N H sing N N 387 VAL N H2 sing N N 388 VAL CA C sing N N 389 VAL CA CB sing N N 390 VAL CA HA sing N N 391 VAL C O doub N N 392 VAL C OXT sing N N 393 VAL CB CG1 sing N N 394 VAL CB CG2 sing N N 395 VAL CB HB sing N N 396 VAL CG1 HG11 sing N N 397 VAL CG1 HG12 sing N N 398 VAL CG1 HG13 sing N N 399 VAL CG2 HG21 sing N N 400 VAL CG2 HG22 sing N N 401 VAL CG2 HG23 sing N N 402 VAL OXT HXT sing N N 403 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 801 n B 2 NAG 2 B NAG 2 A NAG 802 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-beta-D-glucopyranose _pdbx_entity_nonpoly.comp_id NAG # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5JQ3 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #