data_6VL4 # _entry.id 6VL4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.336 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6VL4 WWPDB D_1000246575 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6VL4 _pdbx_database_status.recvd_initial_deposition_date 2020-01-22 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ho, J.D.' 1 0000-0002-9636-5527 'Lee, M.R.' 2 ? 'Rauch, C.T.' 3 ? 'Aznavour, K.' 4 ? 'Park, J.S.' 5 ? 'Luz, J.G.' 6 ? 'Antonysamy, S.' 7 ? 'Condon, B.' 8 ? 'Maletic, M.' 9 ? 'Zhang, A.' 10 ? 'Hickey, M.J.' 11 ? 'Hughes, N.E.' 12 ? 'Chandrasekhar, S.' 13 ? 'Sloan, A.V.' 14 ? 'Gooding, K.' 15 ? 'Harvey, A.' 16 ? 'Yu, X.P.' 17 ? 'Kahl, S.D.' 18 ? 'Norman, B.H.' 19 0000-0002-0765-8548 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Biochim Biophys Acta Gen Subj' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1872-8006 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 1865 _citation.language ? _citation.page_first 129800 _citation.page_last 129800 _citation.title ;Structure-based, multi-targeted drug discovery approach to eicosanoid inhibition: Dual inhibitors of mPGES-1 and 5-lipoxygenase activating protein (FLAP). ; _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.bbagen.2020.129800 _citation.pdbx_database_id_PubMed 33246032 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ho, J.D.' 1 ? primary 'Lee, M.R.' 2 ? primary 'Rauch, C.T.' 3 ? primary 'Aznavour, K.' 4 ? primary 'Park, J.S.' 5 ? primary 'Luz, J.G.' 6 ? primary 'Antonysamy, S.' 7 ? primary 'Condon, B.' 8 ? primary 'Maletic, M.' 9 ? primary 'Zhang, A.' 10 ? primary 'Hickey, M.J.' 11 ? primary 'Hughes, N.E.' 12 ? primary 'Chandrasekhar, S.' 13 ? primary 'Sloan, A.V.' 14 ? primary 'Gooding, K.' 15 ? primary 'Harvey, A.' 16 ? primary 'Yu, X.P.' 17 ? primary 'Kahl, S.D.' 18 ? primary 'Norman, B.H.' 19 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 6VL4 _cell.details ? _cell.formula_units_Z ? _cell.length_a 76.417 _cell.length_a_esd ? _cell.length_b 76.417 _cell.length_b_esd ? _cell.length_c 123.784 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 9 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VL4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Prostaglandin E synthase' 17323.559 1 5.3.99.3 ? ? ? 2 non-polymer syn '(2R)-cyclopentyl{4-[(quinolin-2-yl)methoxy]phenyl}acetic acid' 361.434 1 ? ? ? ? 3 non-polymer man 'octyl beta-D-glucopyranoside' 292.369 1 ? ? ? ? 4 non-polymer syn 'TETRAETHYLENE GLYCOL' 194.226 2 ? ? ? ? 5 water nat water 18.015 61 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Microsomal glutathione S-transferase 1-like 1,MGST1-L1,Microsomal prostaglandin E synthase 1,MPGES-1,p53-induced gene 12 protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MALPAHSLVMSSPALPAFLLCSTLLVIKMYVVAIITGQVRLRKKAFANPEDALRHGGPQY(CSO)RSDPDVERCLRAHRN DMETIYPFLFLGFVYSFLGPNPFVAWMHFLVFLVGRVAHTVAYLGKLRAPIRSVTYTLAQLPCASMALQILWEAARHL ; _entity_poly.pdbx_seq_one_letter_code_can ;MALPAHSLVMSSPALPAFLLCSTLLVIKMYVVAIITGQVRLRKKAFANPEDALRHGGPQYCRSDPDVERCLRAHRNDMET IYPFLFLGFVYSFLGPNPFVAWMHFLVFLVGRVAHTVAYLGKLRAPIRSVTYTLAQLPCASMALQILWEAARHL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 LEU n 1 4 PRO n 1 5 ALA n 1 6 HIS n 1 7 SER n 1 8 LEU n 1 9 VAL n 1 10 MET n 1 11 SER n 1 12 SER n 1 13 PRO n 1 14 ALA n 1 15 LEU n 1 16 PRO n 1 17 ALA n 1 18 PHE n 1 19 LEU n 1 20 LEU n 1 21 CYS n 1 22 SER n 1 23 THR n 1 24 LEU n 1 25 LEU n 1 26 VAL n 1 27 ILE n 1 28 LYS n 1 29 MET n 1 30 TYR n 1 31 VAL n 1 32 VAL n 1 33 ALA n 1 34 ILE n 1 35 ILE n 1 36 THR n 1 37 GLY n 1 38 GLN n 1 39 VAL n 1 40 ARG n 1 41 LEU n 1 42 ARG n 1 43 LYS n 1 44 LYS n 1 45 ALA n 1 46 PHE n 1 47 ALA n 1 48 ASN n 1 49 PRO n 1 50 GLU n 1 51 ASP n 1 52 ALA n 1 53 LEU n 1 54 ARG n 1 55 HIS n 1 56 GLY n 1 57 GLY n 1 58 PRO n 1 59 GLN n 1 60 TYR n 1 61 CSO n 1 62 ARG n 1 63 SER n 1 64 ASP n 1 65 PRO n 1 66 ASP n 1 67 VAL n 1 68 GLU n 1 69 ARG n 1 70 CYS n 1 71 LEU n 1 72 ARG n 1 73 ALA n 1 74 HIS n 1 75 ARG n 1 76 ASN n 1 77 ASP n 1 78 MET n 1 79 GLU n 1 80 THR n 1 81 ILE n 1 82 TYR n 1 83 PRO n 1 84 PHE n 1 85 LEU n 1 86 PHE n 1 87 LEU n 1 88 GLY n 1 89 PHE n 1 90 VAL n 1 91 TYR n 1 92 SER n 1 93 PHE n 1 94 LEU n 1 95 GLY n 1 96 PRO n 1 97 ASN n 1 98 PRO n 1 99 PHE n 1 100 VAL n 1 101 ALA n 1 102 TRP n 1 103 MET n 1 104 HIS n 1 105 PHE n 1 106 LEU n 1 107 VAL n 1 108 PHE n 1 109 LEU n 1 110 VAL n 1 111 GLY n 1 112 ARG n 1 113 VAL n 1 114 ALA n 1 115 HIS n 1 116 THR n 1 117 VAL n 1 118 ALA n 1 119 TYR n 1 120 LEU n 1 121 GLY n 1 122 LYS n 1 123 LEU n 1 124 ARG n 1 125 ALA n 1 126 PRO n 1 127 ILE n 1 128 ARG n 1 129 SER n 1 130 VAL n 1 131 THR n 1 132 TYR n 1 133 THR n 1 134 LEU n 1 135 ALA n 1 136 GLN n 1 137 LEU n 1 138 PRO n 1 139 CYS n 1 140 ALA n 1 141 SER n 1 142 MET n 1 143 ALA n 1 144 LEU n 1 145 GLN n 1 146 ILE n 1 147 LEU n 1 148 TRP n 1 149 GLU n 1 150 ALA n 1 151 ALA n 1 152 ARG n 1 153 HIS n 1 154 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 154 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PTGES, MGST1L1, MPGES1, PGES, PIG12' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PTGES_HUMAN _struct_ref.pdbx_db_accession O14684 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PAHSLVMSSPALPAFLLCSTLLVIKMYVVAIITGQVRLRKKAFANPEDALRHGGPQYCRSDPDVERCLRAHRNDMETIYP FLFLGFVYSFLGPNPFVAWMHFLVFLVGRVAHTVAYLGKLRAPIRSVTYTLAQLPCASMALQILWEAARHL ; _struct_ref.pdbx_align_begin 2 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6VL4 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 154 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O14684 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 152 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 152 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6VL4 MET A 1 ? UNP O14684 ? ? 'initiating methionine' -1 1 1 6VL4 ALA A 2 ? UNP O14684 ? ? 'expression tag' 0 2 1 6VL4 LEU A 3 ? UNP O14684 ? ? 'expression tag' 1 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BOG D-saccharide n 'octyl beta-D-glucopyranoside' 'Beta-Octylglucoside; octyl beta-D-glucoside; octyl D-glucoside; octyl glucoside' 'C14 H28 O6' 292.369 CSO 'L-peptide linking' n S-HYDROXYCYSTEINE ? 'C3 H7 N O3 S' 137.158 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PG4 non-polymer . 'TETRAETHYLENE GLYCOL' ? 'C8 H18 O5' 194.226 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 QY1 non-polymer . '(2R)-cyclopentyl{4-[(quinolin-2-yl)methoxy]phenyl}acetic acid' ? 'C23 H23 N O3' 361.434 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6VL4 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.2 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100mM Tris HCl pH 8.2, 29% PEG 1K, 1mM DG-031' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX-225' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-05-30 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9793 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 31-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9793 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 31-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6VL4 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.4 _reflns.d_resolution_low 23.19 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 52754 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.082 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.3 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.4 _reflns_shell.d_res_low 1.48 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.4 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 7803 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value 0.72 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 2.5100 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 2.5100 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -5.0200 _refine.B_iso_max 81.660 _refine.B_iso_mean 19.1960 _refine.B_iso_min 5.220 _refine.correlation_coeff_Fo_to_Fc 0.9730 _refine.correlation_coeff_Fo_to_Fc_free 0.9730 _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6VL4 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.4000 _refine.ls_d_res_low 17.6000 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 50099 _refine.ls_number_reflns_R_free 2652 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.3600 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1398 _refine.ls_R_factor_R_free 0.1450 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1396 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model mPGES _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.0070 _refine.pdbx_overall_ESU_R_Free 0.0070 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 0.3400 _refine.overall_SU_ML 0.0150 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.4000 _refine_hist.d_res_low 17.6000 _refine_hist.number_atoms_solvent 61 _refine_hist.number_atoms_total 1267 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 143 _refine_hist.pdbx_B_iso_mean_ligand 42.26 _refine_hist.pdbx_B_iso_mean_solvent 24.77 _refine_hist.pdbx_number_atoms_protein 1139 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 67 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.003 0.012 1277 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 1.002 1.701 1736 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 4.006 5.000 152 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 41.093 21.176 51 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 13.066 15.000 194 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 11.019 15.000 11 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.091 0.200 161 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 0.020 930 ? r_gen_planes_refined ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.4000 _refine_ls_shell.d_res_low 1.4360 _refine_ls_shell.number_reflns_all 3934 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 196 _refine_ls_shell.number_reflns_R_work 3738 _refine_ls_shell.percent_reflns_obs 99.9700 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2650 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2430 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6VL4 _struct.title 'Crystal Structure of mPGES-1 bound to DG-031' _struct.pdbx_descriptor 'Prostaglandin E synthase (E.C.5.3.99.3)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6VL4 _struct_keywords.text 'mPGES-1, MEMBRANE PROTEIN, ISOMERASE' _struct_keywords.pdbx_keywords 'ISOMERASE, MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA A 14 ? LYS A 44 ? ALA A 12 LYS A 42 1 ? 31 HELX_P HELX_P2 AA2 ASN A 48 ? HIS A 55 ? ASN A 46 HIS A 53 1 ? 8 HELX_P HELX_P3 AA3 GLY A 57 ? CSO A 61 ? GLY A 55 CSO A 59 5 ? 5 HELX_P HELX_P4 AA4 ASP A 64 ? PHE A 93 ? ASP A 62 PHE A 91 1 ? 30 HELX_P HELX_P5 AA5 ASN A 97 ? GLY A 121 ? ASN A 95 GLY A 119 1 ? 25 HELX_P HELX_P6 AA6 PRO A 126 ? HIS A 153 ? PRO A 124 HIS A 151 1 ? 28 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A TYR 60 C ? ? ? 1_555 A CSO 61 N ? ? A TYR 58 A CSO 59 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale2 covale both ? A CSO 61 C ? ? ? 1_555 A ARG 62 N ? ? A CSO 59 A ARG 60 1_555 ? ? ? ? ? ? ? 1.338 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ALA _struct_mon_prot_cis.label_seq_id 125 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ALA _struct_mon_prot_cis.auth_seq_id 123 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 126 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 124 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 7.33 # _atom_sites.entry_id 6VL4 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.013086 _atom_sites.fract_transf_matrix[1][2] 0.007555 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015111 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008079 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -1 ? ? ? A . n A 1 2 ALA 2 0 ? ? ? A . n A 1 3 LEU 3 1 ? ? ? A . n A 1 4 PRO 4 2 ? ? ? A . n A 1 5 ALA 5 3 ? ? ? A . n A 1 6 HIS 6 4 ? ? ? A . n A 1 7 SER 7 5 ? ? ? A . n A 1 8 LEU 8 6 ? ? ? A . n A 1 9 VAL 9 7 ? ? ? A . n A 1 10 MET 10 8 ? ? ? A . n A 1 11 SER 11 9 ? ? ? A . n A 1 12 SER 12 10 10 SER SER A . n A 1 13 PRO 13 11 11 PRO PRO A . n A 1 14 ALA 14 12 12 ALA ALA A . n A 1 15 LEU 15 13 13 LEU LEU A . n A 1 16 PRO 16 14 14 PRO PRO A . n A 1 17 ALA 17 15 15 ALA ALA A . n A 1 18 PHE 18 16 16 PHE PHE A . n A 1 19 LEU 19 17 17 LEU LEU A . n A 1 20 LEU 20 18 18 LEU LEU A . n A 1 21 CYS 21 19 19 CYS CYS A . n A 1 22 SER 22 20 20 SER SER A . n A 1 23 THR 23 21 21 THR THR A . n A 1 24 LEU 24 22 22 LEU LEU A . n A 1 25 LEU 25 23 23 LEU LEU A . n A 1 26 VAL 26 24 24 VAL VAL A . n A 1 27 ILE 27 25 25 ILE ILE A . n A 1 28 LYS 28 26 26 LYS LYS A . n A 1 29 MET 29 27 27 MET MET A . n A 1 30 TYR 30 28 28 TYR TYR A . n A 1 31 VAL 31 29 29 VAL VAL A . n A 1 32 VAL 32 30 30 VAL VAL A . n A 1 33 ALA 33 31 31 ALA ALA A . n A 1 34 ILE 34 32 32 ILE ILE A . n A 1 35 ILE 35 33 33 ILE ILE A . n A 1 36 THR 36 34 34 THR THR A . n A 1 37 GLY 37 35 35 GLY GLY A . n A 1 38 GLN 38 36 36 GLN GLN A . n A 1 39 VAL 39 37 37 VAL VAL A . n A 1 40 ARG 40 38 38 ARG ARG A . n A 1 41 LEU 41 39 39 LEU LEU A . n A 1 42 ARG 42 40 40 ARG ARG A . n A 1 43 LYS 43 41 41 LYS LYS A . n A 1 44 LYS 44 42 42 LYS LYS A . n A 1 45 ALA 45 43 43 ALA ALA A . n A 1 46 PHE 46 44 44 PHE PHE A . n A 1 47 ALA 47 45 45 ALA ALA A . n A 1 48 ASN 48 46 46 ASN ASN A . n A 1 49 PRO 49 47 47 PRO PRO A . n A 1 50 GLU 50 48 48 GLU GLU A . n A 1 51 ASP 51 49 49 ASP ASP A . n A 1 52 ALA 52 50 50 ALA ALA A . n A 1 53 LEU 53 51 51 LEU LEU A . n A 1 54 ARG 54 52 52 ARG ARG A . n A 1 55 HIS 55 53 53 HIS HIS A . n A 1 56 GLY 56 54 54 GLY GLY A . n A 1 57 GLY 57 55 55 GLY GLY A . n A 1 58 PRO 58 56 56 PRO PRO A . n A 1 59 GLN 59 57 57 GLN GLN A . n A 1 60 TYR 60 58 58 TYR TYR A . n A 1 61 CSO 61 59 59 CSO CSO A . n A 1 62 ARG 62 60 60 ARG ARG A . n A 1 63 SER 63 61 61 SER SER A . n A 1 64 ASP 64 62 62 ASP ASP A . n A 1 65 PRO 65 63 63 PRO PRO A . n A 1 66 ASP 66 64 64 ASP ASP A . n A 1 67 VAL 67 65 65 VAL VAL A . n A 1 68 GLU 68 66 66 GLU GLU A . n A 1 69 ARG 69 67 67 ARG ARG A . n A 1 70 CYS 70 68 68 CYS CYS A . n A 1 71 LEU 71 69 69 LEU LEU A . n A 1 72 ARG 72 70 70 ARG ARG A . n A 1 73 ALA 73 71 71 ALA ALA A . n A 1 74 HIS 74 72 72 HIS HIS A . n A 1 75 ARG 75 73 73 ARG ARG A . n A 1 76 ASN 76 74 74 ASN ASN A . n A 1 77 ASP 77 75 75 ASP ASP A . n A 1 78 MET 78 76 76 MET MET A . n A 1 79 GLU 79 77 77 GLU GLU A . n A 1 80 THR 80 78 78 THR THR A . n A 1 81 ILE 81 79 79 ILE ILE A . n A 1 82 TYR 82 80 80 TYR TYR A . n A 1 83 PRO 83 81 81 PRO PRO A . n A 1 84 PHE 84 82 82 PHE PHE A . n A 1 85 LEU 85 83 83 LEU LEU A . n A 1 86 PHE 86 84 84 PHE PHE A . n A 1 87 LEU 87 85 85 LEU LEU A . n A 1 88 GLY 88 86 86 GLY GLY A . n A 1 89 PHE 89 87 87 PHE PHE A . n A 1 90 VAL 90 88 88 VAL VAL A . n A 1 91 TYR 91 89 89 TYR TYR A . n A 1 92 SER 92 90 90 SER SER A . n A 1 93 PHE 93 91 91 PHE PHE A . n A 1 94 LEU 94 92 92 LEU LEU A . n A 1 95 GLY 95 93 93 GLY GLY A . n A 1 96 PRO 96 94 94 PRO PRO A . n A 1 97 ASN 97 95 95 ASN ASN A . n A 1 98 PRO 98 96 96 PRO PRO A . n A 1 99 PHE 99 97 97 PHE PHE A . n A 1 100 VAL 100 98 98 VAL VAL A . n A 1 101 ALA 101 99 99 ALA ALA A . n A 1 102 TRP 102 100 100 TRP TRP A . n A 1 103 MET 103 101 101 MET MET A . n A 1 104 HIS 104 102 102 HIS HIS A . n A 1 105 PHE 105 103 103 PHE PHE A . n A 1 106 LEU 106 104 104 LEU LEU A . n A 1 107 VAL 107 105 105 VAL VAL A . n A 1 108 PHE 108 106 106 PHE PHE A . n A 1 109 LEU 109 107 107 LEU LEU A . n A 1 110 VAL 110 108 108 VAL VAL A . n A 1 111 GLY 111 109 109 GLY GLY A . n A 1 112 ARG 112 110 110 ARG ARG A . n A 1 113 VAL 113 111 111 VAL VAL A . n A 1 114 ALA 114 112 112 ALA ALA A . n A 1 115 HIS 115 113 113 HIS HIS A . n A 1 116 THR 116 114 114 THR THR A . n A 1 117 VAL 117 115 115 VAL VAL A . n A 1 118 ALA 118 116 116 ALA ALA A . n A 1 119 TYR 119 117 117 TYR TYR A . n A 1 120 LEU 120 118 118 LEU LEU A . n A 1 121 GLY 121 119 119 GLY GLY A . n A 1 122 LYS 122 120 120 LYS LYS A . n A 1 123 LEU 123 121 121 LEU LEU A . n A 1 124 ARG 124 122 122 ARG ARG A . n A 1 125 ALA 125 123 123 ALA ALA A . n A 1 126 PRO 126 124 124 PRO PRO A . n A 1 127 ILE 127 125 125 ILE ILE A . n A 1 128 ARG 128 126 126 ARG ARG A . n A 1 129 SER 129 127 127 SER SER A . n A 1 130 VAL 130 128 128 VAL VAL A . n A 1 131 THR 131 129 129 THR THR A . n A 1 132 TYR 132 130 130 TYR TYR A . n A 1 133 THR 133 131 131 THR THR A . n A 1 134 LEU 134 132 132 LEU LEU A . n A 1 135 ALA 135 133 133 ALA ALA A . n A 1 136 GLN 136 134 134 GLN GLN A . n A 1 137 LEU 137 135 135 LEU LEU A . n A 1 138 PRO 138 136 136 PRO PRO A . n A 1 139 CYS 139 137 137 CYS CYS A . n A 1 140 ALA 140 138 138 ALA ALA A . n A 1 141 SER 141 139 139 SER SER A . n A 1 142 MET 142 140 140 MET MET A . n A 1 143 ALA 143 141 141 ALA ALA A . n A 1 144 LEU 144 142 142 LEU LEU A . n A 1 145 GLN 145 143 143 GLN GLN A . n A 1 146 ILE 146 144 144 ILE ILE A . n A 1 147 LEU 147 145 145 LEU LEU A . n A 1 148 TRP 148 146 146 TRP TRP A . n A 1 149 GLU 149 147 147 GLU GLU A . n A 1 150 ALA 150 148 148 ALA ALA A . n A 1 151 ALA 151 149 149 ALA ALA A . n A 1 152 ARG 152 150 150 ARG ARG A . n A 1 153 HIS 153 151 151 HIS HIS A . n A 1 154 LEU 154 152 152 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 QY1 1 201 1 QY1 SX1 A . C 3 BOG 1 202 1 BOG BOG A . D 4 PG4 1 203 2 PG4 PG4 A . E 4 PG4 1 204 3 PG4 PG4 A . F 5 HOH 1 301 47 HOH HOH A . F 5 HOH 2 302 21 HOH HOH A . F 5 HOH 3 303 25 HOH HOH A . F 5 HOH 4 304 15 HOH HOH A . F 5 HOH 5 305 27 HOH HOH A . F 5 HOH 6 306 13 HOH HOH A . F 5 HOH 7 307 49 HOH HOH A . F 5 HOH 8 308 6 HOH HOH A . F 5 HOH 9 309 28 HOH HOH A . F 5 HOH 10 310 14 HOH HOH A . F 5 HOH 11 311 30 HOH HOH A . F 5 HOH 12 312 34 HOH HOH A . F 5 HOH 13 313 56 HOH HOH A . F 5 HOH 14 314 31 HOH HOH A . F 5 HOH 15 315 52 HOH HOH A . F 5 HOH 16 316 39 HOH HOH A . F 5 HOH 17 317 18 HOH HOH A . F 5 HOH 18 318 20 HOH HOH A . F 5 HOH 19 319 40 HOH HOH A . F 5 HOH 20 320 60 HOH HOH A . F 5 HOH 21 321 29 HOH HOH A . F 5 HOH 22 322 44 HOH HOH A . F 5 HOH 23 323 48 HOH HOH A . F 5 HOH 24 324 5 HOH HOH A . F 5 HOH 25 325 54 HOH HOH A . F 5 HOH 26 326 26 HOH HOH A . F 5 HOH 27 327 61 HOH HOH A . F 5 HOH 28 328 16 HOH HOH A . F 5 HOH 29 329 12 HOH HOH A . F 5 HOH 30 330 43 HOH HOH A . F 5 HOH 31 331 42 HOH HOH A . F 5 HOH 32 332 38 HOH HOH A . F 5 HOH 33 333 22 HOH HOH A . F 5 HOH 34 334 46 HOH HOH A . F 5 HOH 35 335 23 HOH HOH A . F 5 HOH 36 336 19 HOH HOH A . F 5 HOH 37 337 32 HOH HOH A . F 5 HOH 38 338 8 HOH HOH A . F 5 HOH 39 339 36 HOH HOH A . F 5 HOH 40 340 2 HOH HOH A . F 5 HOH 41 341 24 HOH HOH A . F 5 HOH 42 342 53 HOH HOH A . F 5 HOH 43 343 57 HOH HOH A . F 5 HOH 44 344 50 HOH HOH A . F 5 HOH 45 345 55 HOH HOH A . F 5 HOH 46 346 11 HOH HOH A . F 5 HOH 47 347 10 HOH HOH A . F 5 HOH 48 348 59 HOH HOH A . F 5 HOH 49 349 7 HOH HOH A . F 5 HOH 50 350 17 HOH HOH A . F 5 HOH 51 351 9 HOH HOH A . F 5 HOH 52 352 35 HOH HOH A . F 5 HOH 53 353 41 HOH HOH A . F 5 HOH 54 354 1 HOH HOH A . F 5 HOH 55 355 58 HOH HOH A . F 5 HOH 56 356 45 HOH HOH A . F 5 HOH 57 357 3 HOH HOH A . F 5 HOH 58 358 33 HOH HOH A . F 5 HOH 59 359 37 HOH HOH A . F 5 HOH 60 360 51 HOH HOH A . F 5 HOH 61 361 4 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id CSO _pdbx_struct_mod_residue.label_seq_id 61 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id CSO _pdbx_struct_mod_residue.auth_seq_id 59 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id CYS _pdbx_struct_mod_residue.details 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 11370 ? 1 MORE -23 ? 1 'SSA (A^2)' 18130 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-12-02 2 'Structure model' 1 1 2020-12-09 3 'Structure model' 1 2 2020-12-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_id_ISSN' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.pdbx_database_id_PubMed' 5 2 'Structure model' '_citation.title' 6 2 'Structure model' '_citation_author.identifier_ORCID' 7 3 'Structure model' '_citation.journal_volume' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0103 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? MOSFLM ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _pdbx_entry_details.entry_id 6VL4 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER 10 ? OG ? A SER 12 OG 2 1 N 1 A PG4 204 ? C5 ? E PG4 1 C5 3 1 N 1 A PG4 204 ? C6 ? E PG4 1 C6 4 1 N 1 A PG4 204 ? O4 ? E PG4 1 O4 5 1 N 1 A PG4 204 ? C7 ? E PG4 1 C7 6 1 N 1 A PG4 204 ? C8 ? E PG4 1 C8 7 1 N 1 A PG4 204 ? O5 ? E PG4 1 O5 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -1 ? A MET 1 2 1 Y 1 A ALA 0 ? A ALA 2 3 1 Y 1 A LEU 1 ? A LEU 3 4 1 Y 1 A PRO 2 ? A PRO 4 5 1 Y 1 A ALA 3 ? A ALA 5 6 1 Y 1 A HIS 4 ? A HIS 6 7 1 Y 1 A SER 5 ? A SER 7 8 1 Y 1 A LEU 6 ? A LEU 8 9 1 Y 1 A VAL 7 ? A VAL 9 10 1 Y 1 A MET 8 ? A MET 10 11 1 Y 1 A SER 9 ? A SER 11 # _pdbx_chem_comp_identifier.comp_id BOG _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1.0 _pdbx_chem_comp_identifier.identifier b-octylglucoside # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id QY1 _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id QY1 _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '(2R)-cyclopentyl{4-[(quinolin-2-yl)methoxy]phenyl}acetic acid' QY1 3 'octyl beta-D-glucopyranoside' BOG 4 'TETRAETHYLENE GLYCOL' PG4 5 water HOH # loop_ _pdbx_reflns_twin.domain_id _pdbx_reflns_twin.crystal_id _pdbx_reflns_twin.diffrn_id _pdbx_reflns_twin.fraction _pdbx_reflns_twin.operator _pdbx_reflns_twin.type _pdbx_reflns_twin.mean_F_square_over_mean_F2 _pdbx_reflns_twin.mean_I2_over_mean_I_square 1 1 1 0.439 'H, K, L' ? ? ? 2 1 1 0.561 'K, H, -L' ? ? ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #