data_6VT9 # _entry.id 6VT9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6VT9 pdb_00006vt9 10.2210/pdb6vt9/pdb WWPDB D_1000247044 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6VT9 _pdbx_database_status.recvd_initial_deposition_date 2020-02-12 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Unciuleac, M.C.' 1 ? 'Goldgur, Y.' 2 ? 'Shuman, S.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 48 _citation.language ? _citation.page_first 5603 _citation.page_last 5615 _citation.title ;Caveat mutator: alanine substitutions for conserved amino acids in RNA ligase elicit unexpected rearrangements of the active site for lysine adenylylation. ; _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkaa238 _citation.pdbx_database_id_PubMed 32315072 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Unciuleac, M.C.' 1 ? primary 'Goldgur, Y.' 2 ? primary 'Shuman, S.' 3 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6VT9 _cell.details ? _cell.formula_units_Z ? _cell.length_a 88.432 _cell.length_a_esd ? _cell.length_b 88.432 _cell.length_b_esd ? _cell.length_c 105.347 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VT9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RNA ligase' 38603.797 1 ? E227A ? ? 2 non-polymer syn "ADENOSINE-5'-TRIPHOSPHATE" 507.181 1 ? ? ? ? 3 non-polymer syn 'MANGANESE (II) ION' 54.938 1 ? ? ? ? 4 water nat water 18.015 15 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMGVRKLATIRTAGEITPIAGAEAIECCHVDGWTCVIKKGEFKQGDRGVYFEIDSFIKEDNDRYPMLSKQVIDYEGQRGT RLRTARLRGQLSQGLFLPMDRFPELASNQVGDDVTEILGITKWEPPISTNLSGEILGEFPTFISKTDQERVQNLIPQIEE NKGQKFEVTVKLDGSSMTVYRKDDHIGVCGRNWELRETATNAQWHAARRNKMIEGLQFLNRNLALQGAIIGESIQGNLEK LKGQDFYLFDIYDIDKAQYLTPIERQSLVKQLNDNGFTVKHVPILDDLELNHTAEQILAMADGPSLNKNVKREGLVFKRL DGKFSFKAISNAYLEKHKDR ; _entity_poly.pdbx_seq_one_letter_code_can ;SMGVRKLATIRTAGEITPIAGAEAIECCHVDGWTCVIKKGEFKQGDRGVYFEIDSFIKEDNDRYPMLSKQVIDYEGQRGT RLRTARLRGQLSQGLFLPMDRFPELASNQVGDDVTEILGITKWEPPISTNLSGEILGEFPTFISKTDQERVQNLIPQIEE NKGQKFEVTVKLDGSSMTVYRKDDHIGVCGRNWELRETATNAQWHAARRNKMIEGLQFLNRNLALQGAIIGESIQGNLEK LKGQDFYLFDIYDIDKAQYLTPIERQSLVKQLNDNGFTVKHVPILDDLELNHTAEQILAMADGPSLNKNVKREGLVFKRL DGKFSFKAISNAYLEKHKDR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 GLY n 1 4 VAL n 1 5 ARG n 1 6 LYS n 1 7 LEU n 1 8 ALA n 1 9 THR n 1 10 ILE n 1 11 ARG n 1 12 THR n 1 13 ALA n 1 14 GLY n 1 15 GLU n 1 16 ILE n 1 17 THR n 1 18 PRO n 1 19 ILE n 1 20 ALA n 1 21 GLY n 1 22 ALA n 1 23 GLU n 1 24 ALA n 1 25 ILE n 1 26 GLU n 1 27 CYS n 1 28 CYS n 1 29 HIS n 1 30 VAL n 1 31 ASP n 1 32 GLY n 1 33 TRP n 1 34 THR n 1 35 CYS n 1 36 VAL n 1 37 ILE n 1 38 LYS n 1 39 LYS n 1 40 GLY n 1 41 GLU n 1 42 PHE n 1 43 LYS n 1 44 GLN n 1 45 GLY n 1 46 ASP n 1 47 ARG n 1 48 GLY n 1 49 VAL n 1 50 TYR n 1 51 PHE n 1 52 GLU n 1 53 ILE n 1 54 ASP n 1 55 SER n 1 56 PHE n 1 57 ILE n 1 58 LYS n 1 59 GLU n 1 60 ASP n 1 61 ASN n 1 62 ASP n 1 63 ARG n 1 64 TYR n 1 65 PRO n 1 66 MET n 1 67 LEU n 1 68 SER n 1 69 LYS n 1 70 GLN n 1 71 VAL n 1 72 ILE n 1 73 ASP n 1 74 TYR n 1 75 GLU n 1 76 GLY n 1 77 GLN n 1 78 ARG n 1 79 GLY n 1 80 THR n 1 81 ARG n 1 82 LEU n 1 83 ARG n 1 84 THR n 1 85 ALA n 1 86 ARG n 1 87 LEU n 1 88 ARG n 1 89 GLY n 1 90 GLN n 1 91 LEU n 1 92 SER n 1 93 GLN n 1 94 GLY n 1 95 LEU n 1 96 PHE n 1 97 LEU n 1 98 PRO n 1 99 MET n 1 100 ASP n 1 101 ARG n 1 102 PHE n 1 103 PRO n 1 104 GLU n 1 105 LEU n 1 106 ALA n 1 107 SER n 1 108 ASN n 1 109 GLN n 1 110 VAL n 1 111 GLY n 1 112 ASP n 1 113 ASP n 1 114 VAL n 1 115 THR n 1 116 GLU n 1 117 ILE n 1 118 LEU n 1 119 GLY n 1 120 ILE n 1 121 THR n 1 122 LYS n 1 123 TRP n 1 124 GLU n 1 125 PRO n 1 126 PRO n 1 127 ILE n 1 128 SER n 1 129 THR n 1 130 ASN n 1 131 LEU n 1 132 SER n 1 133 GLY n 1 134 GLU n 1 135 ILE n 1 136 LEU n 1 137 GLY n 1 138 GLU n 1 139 PHE n 1 140 PRO n 1 141 THR n 1 142 PHE n 1 143 ILE n 1 144 SER n 1 145 LYS n 1 146 THR n 1 147 ASP n 1 148 GLN n 1 149 GLU n 1 150 ARG n 1 151 VAL n 1 152 GLN n 1 153 ASN n 1 154 LEU n 1 155 ILE n 1 156 PRO n 1 157 GLN n 1 158 ILE n 1 159 GLU n 1 160 GLU n 1 161 ASN n 1 162 LYS n 1 163 GLY n 1 164 GLN n 1 165 LYS n 1 166 PHE n 1 167 GLU n 1 168 VAL n 1 169 THR n 1 170 VAL n 1 171 LYS n 1 172 LEU n 1 173 ASP n 1 174 GLY n 1 175 SER n 1 176 SER n 1 177 MET n 1 178 THR n 1 179 VAL n 1 180 TYR n 1 181 ARG n 1 182 LYS n 1 183 ASP n 1 184 ASP n 1 185 HIS n 1 186 ILE n 1 187 GLY n 1 188 VAL n 1 189 CYS n 1 190 GLY n 1 191 ARG n 1 192 ASN n 1 193 TRP n 1 194 GLU n 1 195 LEU n 1 196 ARG n 1 197 GLU n 1 198 THR n 1 199 ALA n 1 200 THR n 1 201 ASN n 1 202 ALA n 1 203 GLN n 1 204 TRP n 1 205 HIS n 1 206 ALA n 1 207 ALA n 1 208 ARG n 1 209 ARG n 1 210 ASN n 1 211 LYS n 1 212 MET n 1 213 ILE n 1 214 GLU n 1 215 GLY n 1 216 LEU n 1 217 GLN n 1 218 PHE n 1 219 LEU n 1 220 ASN n 1 221 ARG n 1 222 ASN n 1 223 LEU n 1 224 ALA n 1 225 LEU n 1 226 GLN n 1 227 GLY n 1 228 ALA n 1 229 ILE n 1 230 ILE n 1 231 GLY n 1 232 GLU n 1 233 SER n 1 234 ILE n 1 235 GLN n 1 236 GLY n 1 237 ASN n 1 238 LEU n 1 239 GLU n 1 240 LYS n 1 241 LEU n 1 242 LYS n 1 243 GLY n 1 244 GLN n 1 245 ASP n 1 246 PHE n 1 247 TYR n 1 248 LEU n 1 249 PHE n 1 250 ASP n 1 251 ILE n 1 252 TYR n 1 253 ASP n 1 254 ILE n 1 255 ASP n 1 256 LYS n 1 257 ALA n 1 258 GLN n 1 259 TYR n 1 260 LEU n 1 261 THR n 1 262 PRO n 1 263 ILE n 1 264 GLU n 1 265 ARG n 1 266 GLN n 1 267 SER n 1 268 LEU n 1 269 VAL n 1 270 LYS n 1 271 GLN n 1 272 LEU n 1 273 ASN n 1 274 ASP n 1 275 ASN n 1 276 GLY n 1 277 PHE n 1 278 THR n 1 279 VAL n 1 280 LYS n 1 281 HIS n 1 282 VAL n 1 283 PRO n 1 284 ILE n 1 285 LEU n 1 286 ASP n 1 287 ASP n 1 288 LEU n 1 289 GLU n 1 290 LEU n 1 291 ASN n 1 292 HIS n 1 293 THR n 1 294 ALA n 1 295 GLU n 1 296 GLN n 1 297 ILE n 1 298 LEU n 1 299 ALA n 1 300 MET n 1 301 ALA n 1 302 ASP n 1 303 GLY n 1 304 PRO n 1 305 SER n 1 306 LEU n 1 307 ASN n 1 308 LYS n 1 309 ASN n 1 310 VAL n 1 311 LYS n 1 312 ARG n 1 313 GLU n 1 314 GLY n 1 315 LEU n 1 316 VAL n 1 317 PHE n 1 318 LYS n 1 319 ARG n 1 320 LEU n 1 321 ASP n 1 322 GLY n 1 323 LYS n 1 324 PHE n 1 325 SER n 1 326 PHE n 1 327 LYS n 1 328 ALA n 1 329 ILE n 1 330 SER n 1 331 ASN n 1 332 ALA n 1 333 TYR n 1 334 LEU n 1 335 GLU n 1 336 LYS n 1 337 HIS n 1 338 LYS n 1 339 ASP n 1 340 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 340 _entity_src_gen.gene_src_common_name Amoeba _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene NAEGRDRAFT_82186 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Naegleria gruberi' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5762 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code D2W2Z5_NAEGR _struct_ref.pdbx_db_accession D2W2Z5 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MGVRKLATIRTAGEITPIAGAEAIECCHVDGWTCVIKKGEFKQGDRGVYFEIDSFIKEDNDRYPMLSKQVIDYEGQRGTR LRTARLRGQLSQGLFLPMDRFPELASNQVGDDVTEILGITKWEPPISTNLSGEILGEFPTFISKTDQERVQNLIPQIEEN KGQKFEVTVKLDGSSMTVYRKDDHIGVCGRNWELRETATNAQWHAARRNKMIEGLQFLNRNLALQGEIIGESIQGNLEKL KGQDFYLFDIYDIDKAQYLTPIERQSLVKQLNDNGFTVKHVPILDDLELNHTAEQILAMADGPSLNKNVKREGLVFKRLD GKFSFKAISNAYLEKHKDR ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6VT9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 340 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession D2W2Z5 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 339 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 339 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6VT9 SER A 1 ? UNP D2W2Z5 ? ? 'expression tag' 0 1 1 6VT9 ALA A 228 ? UNP D2W2Z5 GLU 227 'engineered mutation' 227 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 ATP non-polymer . "ADENOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O13 P3' 507.181 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6VT9 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.67 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 53.89 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;NgrRnlE227A (12 mg/ml) was adjusted to 2 mM ATP and 5 mM MnCl2 and incubated for 15 min on ice before aliquots of the protein solution (1 ul) were mixed on a coverslip with an equal volume of precipitant solution containing 0.1 M HEPES pH 6.5, 30% PEG6000 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-08-03 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9793 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9793 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6VT9 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.49 _reflns.d_resolution_low 30.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 27618 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.900 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 14.700 _reflns.pdbx_Rmerge_I_obs 0.144 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 8.900 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 3.084 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.150 _reflns.pdbx_Rpim_I_all 0.041 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 2.49 2.540 ? ? ? ? ? ? 749 100.000 ? ? ? ? 2.006 ? ? ? ? ? ? ? ? 16.600 ? 1.341 ? ? 2.072 0.516 ? 1 1 0.645 ? ? 2.540 2.590 ? ? ? ? ? ? 718 100.000 ? ? ? ? 1.642 ? ? ? ? ? ? ? ? 16.700 ? 1.434 ? ? 1.696 0.421 ? 2 1 0.699 ? ? 2.590 2.640 ? ? ? ? ? ? 748 100.000 ? ? ? ? 1.433 ? ? ? ? ? ? ? ? 16.500 ? 1.511 ? ? 1.480 0.368 ? 3 1 0.789 ? ? 2.640 2.690 ? ? ? ? ? ? 739 100.000 ? ? ? ? 1.164 ? ? ? ? ? ? ? ? 16.600 ? 1.620 ? ? 1.202 0.299 ? 4 1 0.754 ? ? 2.690 2.750 ? ? ? ? ? ? 735 100.000 ? ? ? ? 0.961 ? ? ? ? ? ? ? ? 16.600 ? 1.759 ? ? 0.993 0.246 ? 5 1 0.878 ? ? 2.750 2.820 ? ? ? ? ? ? 726 100.000 ? ? ? ? 0.719 ? ? ? ? ? ? ? ? 16.300 ? 1.972 ? ? 0.743 0.186 ? 6 1 0.939 ? ? 2.820 2.890 ? ? ? ? ? ? 739 100.000 ? ? ? ? 0.644 ? ? ? ? ? ? ? ? 16.200 ? 2.116 ? ? 0.665 0.167 ? 7 1 0.943 ? ? 2.890 2.960 ? ? ? ? ? ? 750 100.000 ? ? ? ? 0.519 ? ? ? ? ? ? ? ? 16.100 ? 2.410 ? ? 0.536 0.135 ? 8 1 0.960 ? ? 2.960 3.050 ? ? ? ? ? ? 739 100.000 ? ? ? ? 0.399 ? ? ? ? ? ? ? ? 15.800 ? 2.669 ? ? 0.413 0.105 ? 9 1 0.976 ? ? 3.050 3.150 ? ? ? ? ? ? 742 100.000 ? ? ? ? 0.325 ? ? ? ? ? ? ? ? 15.400 ? 2.950 ? ? 0.337 0.087 ? 10 1 0.984 ? ? 3.150 3.260 ? ? ? ? ? ? 746 100.000 ? ? ? ? 0.270 ? ? ? ? ? ? ? ? 14.900 ? 3.169 ? ? 0.280 0.074 ? 11 1 0.989 ? ? 3.260 3.390 ? ? ? ? ? ? 744 100.000 ? ? ? ? 0.207 ? ? ? ? ? ? ? ? 14.300 ? 3.533 ? ? 0.215 0.058 ? 12 1 0.992 ? ? 3.390 3.550 ? ? ? ? ? ? 750 100.000 ? ? ? ? 0.177 ? ? ? ? ? ? ? ? 13.900 ? 4.153 ? ? 0.184 0.050 ? 13 1 0.989 ? ? 3.550 3.730 ? ? ? ? ? ? 758 100.000 ? ? ? ? 0.177 ? ? ? ? ? ? ? ? 12.700 ? 5.176 ? ? 0.185 0.053 ? 14 1 0.992 ? ? 3.730 3.970 ? ? ? ? ? ? 745 100.000 ? ? ? ? 0.138 ? ? ? ? ? ? ? ? 13.000 ? 4.928 ? ? 0.144 0.041 ? 15 1 0.994 ? ? 3.970 4.270 ? ? ? ? ? ? 766 100.000 ? ? ? ? 0.111 ? ? ? ? ? ? ? ? 12.700 ? 4.925 ? ? 0.116 0.033 ? 16 1 0.996 ? ? 4.270 4.700 ? ? ? ? ? ? 771 100.000 ? ? ? ? 0.092 ? ? ? ? ? ? ? ? 12.300 ? 5.165 ? ? 0.096 0.028 ? 17 1 0.996 ? ? 4.700 5.380 ? ? ? ? ? ? 765 100.000 ? ? ? ? 0.088 ? ? ? ? ? ? ? ? 12.500 ? 5.008 ? ? 0.092 0.027 ? 18 1 0.997 ? ? 5.380 6.760 ? ? ? ? ? ? 794 100.000 ? ? ? ? 0.079 ? ? ? ? ? ? ? ? 13.300 ? 4.340 ? ? 0.082 0.023 ? 19 1 0.998 ? ? 6.760 30.000 ? ? ? ? ? ? 857 98.800 ? ? ? ? 0.060 ? ? ? ? ? ? ? ? 12.000 ? 4.310 ? ? 0.064 0.019 ? 20 1 0.996 ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 169.290 _refine.B_iso_mean 80.5114 _refine.B_iso_min 33.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6VT9 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.4900 _refine.ls_d_res_low 27.5000 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 27618 _refine.ls_number_reflns_R_free 2785 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.7300 _refine.ls_percent_reflns_R_free 10.0800 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2272 _refine.ls_R_factor_R_free 0.3055 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2186 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.330 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5COT _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 36.3100 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.4800 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.4900 _refine_hist.d_res_low 27.5000 _refine_hist.number_atoms_solvent 15 _refine_hist.number_atoms_total 2724 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 335 _refine_hist.pdbx_B_iso_mean_ligand 82.90 _refine_hist.pdbx_B_iso_mean_solvent 67.92 _refine_hist.pdbx_number_atoms_protein 2677 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.4900 2.5300 1080 . 108 972 78.0000 . . . 0.4645 0.0000 0.3752 . . . . . . . 20 . . . 'X-RAY DIFFRACTION' 2.5300 2.5800 1408 . 140 1268 100.0000 . . . 0.4306 0.0000 0.3617 . . . . . . . 20 . . . 'X-RAY DIFFRACTION' 2.5800 2.6300 1379 . 141 1238 100.0000 . . . 0.4190 0.0000 0.3485 . . . . . . . 20 . . . 'X-RAY DIFFRACTION' 2.6300 2.6800 1407 . 141 1266 100.0000 . . . 0.4744 0.0000 0.3417 . . . . . . . 20 . . . 'X-RAY DIFFRACTION' 2.6800 2.7400 1416 . 139 1277 100.0000 . . . 0.4477 0.0000 0.3461 . . . . . . . 20 . . . 'X-RAY DIFFRACTION' 2.7400 2.8000 1392 . 138 1254 100.0000 . . . 0.4072 0.0000 0.3130 . . . . . . . 20 . . . 'X-RAY DIFFRACTION' 2.8000 2.8700 1401 . 136 1265 100.0000 . . . 0.3611 0.0000 0.3017 . . . . . . . 20 . . . 'X-RAY DIFFRACTION' 2.8700 2.9500 1409 . 142 1267 100.0000 . . . 0.4241 0.0000 0.2871 . . . . . . . 20 . . . 'X-RAY DIFFRACTION' 2.9500 3.0400 1382 . 140 1242 100.0000 . . . 0.3069 0.0000 0.2641 . . . . . . . 20 . . . 'X-RAY DIFFRACTION' 3.0400 3.1400 1399 . 143 1256 100.0000 . . . 0.3504 0.0000 0.2593 . . . . . . . 20 . . . 'X-RAY DIFFRACTION' 3.1400 3.2500 1401 . 141 1260 100.0000 . . . 0.3564 0.0000 0.2716 . . . . . . . 20 . . . 'X-RAY DIFFRACTION' 3.2500 3.3800 1389 . 142 1247 100.0000 . . . 0.3064 0.0000 0.2539 . . . . . . . 20 . . . 'X-RAY DIFFRACTION' 3.3800 3.5300 1419 . 147 1272 100.0000 . . . 0.3464 0.0000 0.2547 . . . . . . . 20 . . . 'X-RAY DIFFRACTION' 3.5300 3.7200 1372 . 139 1233 99.0000 . . . 0.4436 0.0000 0.2541 . . . . . . . 20 . . . 'X-RAY DIFFRACTION' 3.7200 3.9500 1393 . 141 1252 99.0000 . . . 0.3146 0.0000 0.2376 . . . . . . . 20 . . . 'X-RAY DIFFRACTION' 3.9500 4.2500 1388 . 141 1247 100.0000 . . . 0.2400 0.0000 0.1890 . . . . . . . 20 . . . 'X-RAY DIFFRACTION' 4.2500 4.6800 1416 . 142 1274 100.0000 . . . 0.2589 0.0000 0.1552 . . . . . . . 20 . . . 'X-RAY DIFFRACTION' 4.6800 5.3500 1383 . 140 1243 100.0000 . . . 0.2218 0.0000 0.1596 . . . . . . . 20 . . . 'X-RAY DIFFRACTION' 5.3600 6.7200 1401 . 144 1257 100.0000 . . . 0.2567 0.0000 0.1792 . . . . . . . 20 . . . 'X-RAY DIFFRACTION' 6.7300 27.5000 1383 . 140 1243 98.0000 . . . 0.2455 0.0000 0.1636 . . . . . . . 20 . . . # _struct.entry_id 6VT9 _struct.title 'Naegleria gruberi RNA ligase E227A mutant with ATP and Mn' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6VT9 _struct_keywords.text 'RNA repair, adenylyltransferase, LIGASE' _struct_keywords.pdbx_keywords LIGASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 TYR A 64 ? LYS A 69 ? TYR A 63 LYS A 68 5 ? 6 HELX_P HELX_P2 AA2 ASP A 100 ? ALA A 106 ? ASP A 99 ALA A 105 5 ? 7 HELX_P HELX_P3 AA3 SER A 128 ? SER A 132 ? SER A 127 SER A 131 5 ? 5 HELX_P HELX_P4 AA4 LEU A 154 ? ASN A 161 ? LEU A 153 ASN A 160 1 ? 8 HELX_P HELX_P5 AA5 ASN A 201 ? ASN A 210 ? ASN A 200 ASN A 209 1 ? 10 HELX_P HELX_P6 AA6 LYS A 211 ? ASN A 220 ? LYS A 210 ASN A 219 1 ? 10 HELX_P HELX_P7 AA7 ILE A 234 ? LEU A 238 ? ILE A 233 LEU A 237 5 ? 5 HELX_P HELX_P8 AA8 THR A 261 ? ASN A 275 ? THR A 260 ASN A 274 1 ? 15 HELX_P HELX_P9 AA9 THR A 293 ? MET A 300 ? THR A 292 MET A 299 1 ? 8 HELX_P HELX_P10 AB1 SER A 330 ? LYS A 336 ? SER A 329 LYS A 335 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 147 OD2 ? ? ? 1_555 C MN . MN ? ? A ASP 146 A MN 402 1_555 ? ? ? ? ? ? ? 1.732 ? ? metalc2 metalc ? ? B ATP . O3G ? ? ? 1_555 C MN . MN ? ? A ATP 401 A MN 402 1_555 ? ? ? ? ? ? ? 2.234 ? ? metalc3 metalc ? ? B ATP . O1B ? ? ? 1_555 C MN . MN ? ? A ATP 401 A MN 402 1_555 ? ? ? ? ? ? ? 2.429 ? ? metalc4 metalc ? ? B ATP . O2A ? ? ? 1_555 C MN . MN ? ? A ATP 401 A MN 402 1_555 ? ? ? ? ? ? ? 2.329 ? ? metalc5 metalc ? ? C MN . MN ? ? ? 1_555 D HOH . O ? ? A MN 402 A HOH 511 1_555 ? ? ? ? ? ? ? 2.252 ? ? metalc6 metalc ? ? C MN . MN ? ? ? 1_555 D HOH . O ? ? A MN 402 A HOH 515 1_555 ? ? ? ? ? ? ? 2.601 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 3 ? AA3 ? 4 ? AA4 ? 2 ? AA5 ? 7 ? AA6 ? 7 ? AA7 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA5 5 6 ? anti-parallel AA5 6 7 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA6 4 5 ? anti-parallel AA6 5 6 ? anti-parallel AA6 6 7 ? parallel AA7 1 2 ? parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA7 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA A 8 ? THR A 12 ? ALA A 7 THR A 11 AA1 2 ARG A 47 ? PHE A 51 ? ARG A 46 PHE A 50 AA1 3 LEU A 95 ? PRO A 98 ? LEU A 94 PRO A 97 AA2 1 ILE A 16 ? PRO A 18 ? ILE A 15 PRO A 17 AA2 2 ILE A 25 ? VAL A 30 ? ILE A 24 VAL A 29 AA2 3 TRP A 33 ? LYS A 38 ? TRP A 32 LYS A 37 AA3 1 VAL A 71 ? TYR A 74 ? VAL A 70 TYR A 73 AA3 2 GLN A 77 ? ARG A 81 ? GLN A 76 ARG A 80 AA3 3 SER A 55 ? LYS A 58 ? SER A 54 LYS A 57 AA3 4 THR A 121 ? LYS A 122 ? THR A 120 LYS A 121 AA4 1 ALA A 85 ? LEU A 87 ? ALA A 84 LEU A 86 AA4 2 GLN A 90 ? SER A 92 ? GLN A 89 SER A 91 AA5 1 ILE A 135 ? GLU A 138 ? ILE A 134 GLU A 137 AA5 2 TRP A 193 ? LEU A 195 ? TRP A 192 LEU A 194 AA5 3 HIS A 185 ? CYS A 189 ? HIS A 184 CYS A 188 AA5 4 SER A 175 ? LYS A 182 ? SER A 174 LYS A 181 AA5 5 LEU A 223 ? GLY A 231 ? LEU A 222 GLY A 230 AA5 6 GLN A 244 ? ASP A 253 ? GLN A 243 ASP A 252 AA5 7 GLN A 258 ? TYR A 259 ? GLN A 257 TYR A 258 AA6 1 ILE A 135 ? GLU A 138 ? ILE A 134 GLU A 137 AA6 2 TRP A 193 ? LEU A 195 ? TRP A 192 LEU A 194 AA6 3 HIS A 185 ? CYS A 189 ? HIS A 184 CYS A 188 AA6 4 SER A 175 ? LYS A 182 ? SER A 174 LYS A 181 AA6 5 LEU A 223 ? GLY A 231 ? LEU A 222 GLY A 230 AA6 6 GLN A 244 ? ASP A 253 ? GLN A 243 ASP A 252 AA6 7 LYS A 280 ? HIS A 281 ? LYS A 279 HIS A 280 AA7 1 GLU A 149 ? ARG A 150 ? GLU A 148 ARG A 149 AA7 2 SER A 325 ? ILE A 329 ? SER A 324 ILE A 328 AA7 3 GLY A 314 ? ARG A 319 ? GLY A 313 ARG A 318 AA7 4 LYS A 165 ? LYS A 171 ? LYS A 164 LYS A 170 AA7 5 ILE A 284 ? GLU A 289 ? ILE A 283 GLU A 288 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 9 ? N THR A 8 O TYR A 50 ? O TYR A 49 AA1 2 3 N PHE A 51 ? N PHE A 50 O LEU A 95 ? O LEU A 94 AA2 1 2 N THR A 17 ? N THR A 16 O CYS A 27 ? O CYS A 26 AA2 2 3 N CYS A 28 ? N CYS A 27 O CYS A 35 ? O CYS A 34 AA3 1 2 N ILE A 72 ? N ILE A 71 O GLY A 79 ? O GLY A 78 AA3 2 3 O THR A 80 ? O THR A 79 N ILE A 57 ? N ILE A 56 AA3 3 4 N PHE A 56 ? N PHE A 55 O THR A 121 ? O THR A 120 AA4 1 2 N ALA A 85 ? N ALA A 84 O SER A 92 ? O SER A 91 AA5 1 2 N GLY A 137 ? N GLY A 136 O GLU A 194 ? O GLU A 193 AA5 2 3 O LEU A 195 ? O LEU A 194 N VAL A 188 ? N VAL A 187 AA5 3 4 O CYS A 189 ? O CYS A 188 N THR A 178 ? N THR A 177 AA5 4 5 N VAL A 179 ? N VAL A 178 O LEU A 225 ? O LEU A 224 AA5 5 6 N GLN A 226 ? N GLN A 225 O PHE A 249 ? O PHE A 248 AA5 6 7 N ASP A 253 ? N ASP A 252 O GLN A 258 ? O GLN A 257 AA6 1 2 N GLY A 137 ? N GLY A 136 O GLU A 194 ? O GLU A 193 AA6 2 3 O LEU A 195 ? O LEU A 194 N VAL A 188 ? N VAL A 187 AA6 3 4 O CYS A 189 ? O CYS A 188 N THR A 178 ? N THR A 177 AA6 4 5 N VAL A 179 ? N VAL A 178 O LEU A 225 ? O LEU A 224 AA6 5 6 N GLN A 226 ? N GLN A 225 O PHE A 249 ? O PHE A 248 AA6 6 7 N LEU A 248 ? N LEU A 247 O LYS A 280 ? O LYS A 279 AA7 1 2 N GLU A 149 ? N GLU A 148 O LYS A 327 ? O LYS A 326 AA7 2 3 O PHE A 326 ? O PHE A 325 N PHE A 317 ? N PHE A 316 AA7 3 4 O LYS A 318 ? O LYS A 317 N GLU A 167 ? N GLU A 166 AA7 4 5 N VAL A 168 ? N VAL A 167 O LEU A 285 ? O LEU A 284 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ATP 401 ? 19 'binding site for residue ATP A 401' AC2 Software A MN 402 ? 5 'binding site for residue MN A 402' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 19 ARG A 5 ? ARG A 4 . ? 1_555 ? 2 AC1 19 LYS A 122 ? LYS A 121 . ? 1_555 ? 3 AC1 19 THR A 146 ? THR A 145 . ? 1_555 ? 4 AC1 19 ASP A 147 ? ASP A 146 . ? 1_555 ? 5 AC1 19 GLN A 148 ? GLN A 147 . ? 1_555 ? 6 AC1 19 ARG A 150 ? ARG A 149 . ? 1_555 ? 7 AC1 19 THR A 169 ? THR A 168 . ? 1_555 ? 8 AC1 19 VAL A 170 ? VAL A 169 . ? 1_555 ? 9 AC1 19 LYS A 171 ? LYS A 170 . ? 1_555 ? 10 AC1 19 LEU A 172 ? LEU A 171 . ? 1_555 ? 11 AC1 19 SER A 176 ? SER A 175 . ? 1_555 ? 12 AC1 19 ARG A 191 ? ARG A 190 . ? 1_555 ? 13 AC1 19 PHE A 249 ? PHE A 248 . ? 1_555 ? 14 AC1 19 VAL A 282 ? VAL A 281 . ? 1_555 ? 15 AC1 19 VAL A 316 ? VAL A 315 . ? 1_555 ? 16 AC1 19 LYS A 318 ? LYS A 317 . ? 1_555 ? 17 AC1 19 LYS A 327 ? LYS A 326 . ? 1_555 ? 18 AC1 19 MN C . ? MN A 402 . ? 1_555 ? 19 AC1 19 HOH D . ? HOH A 511 . ? 1_555 ? 20 AC2 5 ASP A 147 ? ASP A 146 . ? 1_555 ? 21 AC2 5 ARG A 191 ? ARG A 190 . ? 1_555 ? 22 AC2 5 ATP B . ? ATP A 401 . ? 1_555 ? 23 AC2 5 HOH D . ? HOH A 511 . ? 1_555 ? 24 AC2 5 HOH D . ? HOH A 515 . ? 1_555 ? # _atom_sites.entry_id 6VT9 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.011308 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011308 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009492 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C MN N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 0 ? ? ? A . n A 1 2 MET 2 1 ? ? ? A . n A 1 3 GLY 3 2 ? ? ? A . n A 1 4 VAL 4 3 ? ? ? A . n A 1 5 ARG 5 4 4 ARG ARG A . n A 1 6 LYS 6 5 5 LYS LYS A . n A 1 7 LEU 7 6 6 LEU LEU A . n A 1 8 ALA 8 7 7 ALA ALA A . n A 1 9 THR 9 8 8 THR THR A . n A 1 10 ILE 10 9 9 ILE ILE A . n A 1 11 ARG 11 10 10 ARG ARG A . n A 1 12 THR 12 11 11 THR THR A . n A 1 13 ALA 13 12 12 ALA ALA A . n A 1 14 GLY 14 13 13 GLY GLY A . n A 1 15 GLU 15 14 14 GLU GLU A . n A 1 16 ILE 16 15 15 ILE ILE A . n A 1 17 THR 17 16 16 THR THR A . n A 1 18 PRO 18 17 17 PRO PRO A . n A 1 19 ILE 19 18 18 ILE ILE A . n A 1 20 ALA 20 19 19 ALA ALA A . n A 1 21 GLY 21 20 20 GLY GLY A . n A 1 22 ALA 22 21 21 ALA ALA A . n A 1 23 GLU 23 22 22 GLU GLU A . n A 1 24 ALA 24 23 23 ALA ALA A . n A 1 25 ILE 25 24 24 ILE ILE A . n A 1 26 GLU 26 25 25 GLU GLU A . n A 1 27 CYS 27 26 26 CYS CYS A . n A 1 28 CYS 28 27 27 CYS CYS A . n A 1 29 HIS 29 28 28 HIS HIS A . n A 1 30 VAL 30 29 29 VAL VAL A . n A 1 31 ASP 31 30 30 ASP ASP A . n A 1 32 GLY 32 31 31 GLY GLY A . n A 1 33 TRP 33 32 32 TRP TRP A . n A 1 34 THR 34 33 33 THR THR A . n A 1 35 CYS 35 34 34 CYS CYS A . n A 1 36 VAL 36 35 35 VAL VAL A . n A 1 37 ILE 37 36 36 ILE ILE A . n A 1 38 LYS 38 37 37 LYS LYS A . n A 1 39 LYS 39 38 38 LYS LYS A . n A 1 40 GLY 40 39 39 GLY GLY A . n A 1 41 GLU 41 40 40 GLU GLU A . n A 1 42 PHE 42 41 41 PHE PHE A . n A 1 43 LYS 43 42 42 LYS LYS A . n A 1 44 GLN 44 43 43 GLN GLN A . n A 1 45 GLY 45 44 44 GLY GLY A . n A 1 46 ASP 46 45 45 ASP ASP A . n A 1 47 ARG 47 46 46 ARG ARG A . n A 1 48 GLY 48 47 47 GLY GLY A . n A 1 49 VAL 49 48 48 VAL VAL A . n A 1 50 TYR 50 49 49 TYR TYR A . n A 1 51 PHE 51 50 50 PHE PHE A . n A 1 52 GLU 52 51 51 GLU GLU A . n A 1 53 ILE 53 52 52 ILE ILE A . n A 1 54 ASP 54 53 53 ASP ASP A . n A 1 55 SER 55 54 54 SER SER A . n A 1 56 PHE 56 55 55 PHE PHE A . n A 1 57 ILE 57 56 56 ILE ILE A . n A 1 58 LYS 58 57 57 LYS LYS A . n A 1 59 GLU 59 58 58 GLU GLU A . n A 1 60 ASP 60 59 59 ASP ASP A . n A 1 61 ASN 61 60 60 ASN ASN A . n A 1 62 ASP 62 61 61 ASP ASP A . n A 1 63 ARG 63 62 62 ARG ARG A . n A 1 64 TYR 64 63 63 TYR TYR A . n A 1 65 PRO 65 64 64 PRO PRO A . n A 1 66 MET 66 65 65 MET MET A . n A 1 67 LEU 67 66 66 LEU LEU A . n A 1 68 SER 68 67 67 SER SER A . n A 1 69 LYS 69 68 68 LYS LYS A . n A 1 70 GLN 70 69 69 GLN GLN A . n A 1 71 VAL 71 70 70 VAL VAL A . n A 1 72 ILE 72 71 71 ILE ILE A . n A 1 73 ASP 73 72 72 ASP ASP A . n A 1 74 TYR 74 73 73 TYR TYR A . n A 1 75 GLU 75 74 74 GLU GLU A . n A 1 76 GLY 76 75 75 GLY GLY A . n A 1 77 GLN 77 76 76 GLN GLN A . n A 1 78 ARG 78 77 77 ARG ARG A . n A 1 79 GLY 79 78 78 GLY GLY A . n A 1 80 THR 80 79 79 THR THR A . n A 1 81 ARG 81 80 80 ARG ARG A . n A 1 82 LEU 82 81 81 LEU LEU A . n A 1 83 ARG 83 82 82 ARG ARG A . n A 1 84 THR 84 83 83 THR THR A . n A 1 85 ALA 85 84 84 ALA ALA A . n A 1 86 ARG 86 85 85 ARG ARG A . n A 1 87 LEU 87 86 86 LEU LEU A . n A 1 88 ARG 88 87 87 ARG ARG A . n A 1 89 GLY 89 88 88 GLY GLY A . n A 1 90 GLN 90 89 89 GLN GLN A . n A 1 91 LEU 91 90 90 LEU LEU A . n A 1 92 SER 92 91 91 SER SER A . n A 1 93 GLN 93 92 92 GLN GLN A . n A 1 94 GLY 94 93 93 GLY GLY A . n A 1 95 LEU 95 94 94 LEU LEU A . n A 1 96 PHE 96 95 95 PHE PHE A . n A 1 97 LEU 97 96 96 LEU LEU A . n A 1 98 PRO 98 97 97 PRO PRO A . n A 1 99 MET 99 98 98 MET MET A . n A 1 100 ASP 100 99 99 ASP ASP A . n A 1 101 ARG 101 100 100 ARG ARG A . n A 1 102 PHE 102 101 101 PHE PHE A . n A 1 103 PRO 103 102 102 PRO PRO A . n A 1 104 GLU 104 103 103 GLU GLU A . n A 1 105 LEU 105 104 104 LEU LEU A . n A 1 106 ALA 106 105 105 ALA ALA A . n A 1 107 SER 107 106 106 SER SER A . n A 1 108 ASN 108 107 107 ASN ASN A . n A 1 109 GLN 109 108 108 GLN GLN A . n A 1 110 VAL 110 109 109 VAL VAL A . n A 1 111 GLY 111 110 110 GLY GLY A . n A 1 112 ASP 112 111 111 ASP ASP A . n A 1 113 ASP 113 112 112 ASP ASP A . n A 1 114 VAL 114 113 113 VAL VAL A . n A 1 115 THR 115 114 114 THR THR A . n A 1 116 GLU 116 115 115 GLU GLU A . n A 1 117 ILE 117 116 116 ILE ILE A . n A 1 118 LEU 118 117 117 LEU LEU A . n A 1 119 GLY 119 118 118 GLY GLY A . n A 1 120 ILE 120 119 119 ILE ILE A . n A 1 121 THR 121 120 120 THR THR A . n A 1 122 LYS 122 121 121 LYS LYS A . n A 1 123 TRP 123 122 122 TRP TRP A . n A 1 124 GLU 124 123 123 GLU GLU A . n A 1 125 PRO 125 124 124 PRO PRO A . n A 1 126 PRO 126 125 125 PRO PRO A . n A 1 127 ILE 127 126 126 ILE ILE A . n A 1 128 SER 128 127 127 SER SER A . n A 1 129 THR 129 128 128 THR THR A . n A 1 130 ASN 130 129 129 ASN ASN A . n A 1 131 LEU 131 130 130 LEU LEU A . n A 1 132 SER 132 131 131 SER SER A . n A 1 133 GLY 133 132 132 GLY GLY A . n A 1 134 GLU 134 133 133 GLU GLU A . n A 1 135 ILE 135 134 134 ILE ILE A . n A 1 136 LEU 136 135 135 LEU LEU A . n A 1 137 GLY 137 136 136 GLY GLY A . n A 1 138 GLU 138 137 137 GLU GLU A . n A 1 139 PHE 139 138 138 PHE PHE A . n A 1 140 PRO 140 139 139 PRO PRO A . n A 1 141 THR 141 140 140 THR THR A . n A 1 142 PHE 142 141 141 PHE PHE A . n A 1 143 ILE 143 142 142 ILE ILE A . n A 1 144 SER 144 143 143 SER SER A . n A 1 145 LYS 145 144 144 LYS LYS A . n A 1 146 THR 146 145 145 THR THR A . n A 1 147 ASP 147 146 146 ASP ASP A . n A 1 148 GLN 148 147 147 GLN GLN A . n A 1 149 GLU 149 148 148 GLU GLU A . n A 1 150 ARG 150 149 149 ARG ARG A . n A 1 151 VAL 151 150 150 VAL VAL A . n A 1 152 GLN 152 151 151 GLN GLN A . n A 1 153 ASN 153 152 152 ASN ASN A . n A 1 154 LEU 154 153 153 LEU LEU A . n A 1 155 ILE 155 154 154 ILE ILE A . n A 1 156 PRO 156 155 155 PRO PRO A . n A 1 157 GLN 157 156 156 GLN GLN A . n A 1 158 ILE 158 157 157 ILE ILE A . n A 1 159 GLU 159 158 158 GLU GLU A . n A 1 160 GLU 160 159 159 GLU GLU A . n A 1 161 ASN 161 160 160 ASN ASN A . n A 1 162 LYS 162 161 161 LYS LYS A . n A 1 163 GLY 163 162 162 GLY GLY A . n A 1 164 GLN 164 163 163 GLN GLN A . n A 1 165 LYS 165 164 164 LYS LYS A . n A 1 166 PHE 166 165 165 PHE PHE A . n A 1 167 GLU 167 166 166 GLU GLU A . n A 1 168 VAL 168 167 167 VAL VAL A . n A 1 169 THR 169 168 168 THR THR A . n A 1 170 VAL 170 169 169 VAL VAL A . n A 1 171 LYS 171 170 170 LYS LYS A . n A 1 172 LEU 172 171 171 LEU LEU A . n A 1 173 ASP 173 172 172 ASP ASP A . n A 1 174 GLY 174 173 173 GLY GLY A . n A 1 175 SER 175 174 174 SER SER A . n A 1 176 SER 176 175 175 SER SER A . n A 1 177 MET 177 176 176 MET MET A . n A 1 178 THR 178 177 177 THR THR A . n A 1 179 VAL 179 178 178 VAL VAL A . n A 1 180 TYR 180 179 179 TYR TYR A . n A 1 181 ARG 181 180 180 ARG ARG A . n A 1 182 LYS 182 181 181 LYS LYS A . n A 1 183 ASP 183 182 182 ASP ASP A . n A 1 184 ASP 184 183 183 ASP ASP A . n A 1 185 HIS 185 184 184 HIS HIS A . n A 1 186 ILE 186 185 185 ILE ILE A . n A 1 187 GLY 187 186 186 GLY GLY A . n A 1 188 VAL 188 187 187 VAL VAL A . n A 1 189 CYS 189 188 188 CYS CYS A . n A 1 190 GLY 190 189 189 GLY GLY A . n A 1 191 ARG 191 190 190 ARG ARG A . n A 1 192 ASN 192 191 191 ASN ASN A . n A 1 193 TRP 193 192 192 TRP TRP A . n A 1 194 GLU 194 193 193 GLU GLU A . n A 1 195 LEU 195 194 194 LEU LEU A . n A 1 196 ARG 196 195 195 ARG ARG A . n A 1 197 GLU 197 196 196 GLU GLU A . n A 1 198 THR 198 197 197 THR THR A . n A 1 199 ALA 199 198 198 ALA ALA A . n A 1 200 THR 200 199 199 THR THR A . n A 1 201 ASN 201 200 200 ASN ASN A . n A 1 202 ALA 202 201 201 ALA ALA A . n A 1 203 GLN 203 202 202 GLN GLN A . n A 1 204 TRP 204 203 203 TRP TRP A . n A 1 205 HIS 205 204 204 HIS HIS A . n A 1 206 ALA 206 205 205 ALA ALA A . n A 1 207 ALA 207 206 206 ALA ALA A . n A 1 208 ARG 208 207 207 ARG ARG A . n A 1 209 ARG 209 208 208 ARG ARG A . n A 1 210 ASN 210 209 209 ASN ASN A . n A 1 211 LYS 211 210 210 LYS LYS A . n A 1 212 MET 212 211 211 MET MET A . n A 1 213 ILE 213 212 212 ILE ILE A . n A 1 214 GLU 214 213 213 GLU GLU A . n A 1 215 GLY 215 214 214 GLY GLY A . n A 1 216 LEU 216 215 215 LEU LEU A . n A 1 217 GLN 217 216 216 GLN GLN A . n A 1 218 PHE 218 217 217 PHE PHE A . n A 1 219 LEU 219 218 218 LEU LEU A . n A 1 220 ASN 220 219 219 ASN ASN A . n A 1 221 ARG 221 220 220 ARG ARG A . n A 1 222 ASN 222 221 221 ASN ASN A . n A 1 223 LEU 223 222 222 LEU LEU A . n A 1 224 ALA 224 223 223 ALA ALA A . n A 1 225 LEU 225 224 224 LEU LEU A . n A 1 226 GLN 226 225 225 GLN GLN A . n A 1 227 GLY 227 226 226 GLY GLY A . n A 1 228 ALA 228 227 227 ALA ALA A . n A 1 229 ILE 229 228 228 ILE ILE A . n A 1 230 ILE 230 229 229 ILE ILE A . n A 1 231 GLY 231 230 230 GLY GLY A . n A 1 232 GLU 232 231 231 GLU GLU A . n A 1 233 SER 233 232 232 SER SER A . n A 1 234 ILE 234 233 233 ILE ILE A . n A 1 235 GLN 235 234 234 GLN GLN A . n A 1 236 GLY 236 235 235 GLY GLY A . n A 1 237 ASN 237 236 236 ASN ASN A . n A 1 238 LEU 238 237 237 LEU LEU A . n A 1 239 GLU 239 238 238 GLU GLU A . n A 1 240 LYS 240 239 239 LYS LYS A . n A 1 241 LEU 241 240 240 LEU LEU A . n A 1 242 LYS 242 241 241 LYS LYS A . n A 1 243 GLY 243 242 242 GLY GLY A . n A 1 244 GLN 244 243 243 GLN GLN A . n A 1 245 ASP 245 244 244 ASP ASP A . n A 1 246 PHE 246 245 245 PHE PHE A . n A 1 247 TYR 247 246 246 TYR TYR A . n A 1 248 LEU 248 247 247 LEU LEU A . n A 1 249 PHE 249 248 248 PHE PHE A . n A 1 250 ASP 250 249 249 ASP ASP A . n A 1 251 ILE 251 250 250 ILE ILE A . n A 1 252 TYR 252 251 251 TYR TYR A . n A 1 253 ASP 253 252 252 ASP ASP A . n A 1 254 ILE 254 253 253 ILE ILE A . n A 1 255 ASP 255 254 254 ASP ASP A . n A 1 256 LYS 256 255 255 LYS LYS A . n A 1 257 ALA 257 256 256 ALA ALA A . n A 1 258 GLN 258 257 257 GLN GLN A . n A 1 259 TYR 259 258 258 TYR TYR A . n A 1 260 LEU 260 259 259 LEU LEU A . n A 1 261 THR 261 260 260 THR THR A . n A 1 262 PRO 262 261 261 PRO PRO A . n A 1 263 ILE 263 262 262 ILE ILE A . n A 1 264 GLU 264 263 263 GLU GLU A . n A 1 265 ARG 265 264 264 ARG ARG A . n A 1 266 GLN 266 265 265 GLN GLN A . n A 1 267 SER 267 266 266 SER SER A . n A 1 268 LEU 268 267 267 LEU LEU A . n A 1 269 VAL 269 268 268 VAL VAL A . n A 1 270 LYS 270 269 269 LYS LYS A . n A 1 271 GLN 271 270 270 GLN GLN A . n A 1 272 LEU 272 271 271 LEU LEU A . n A 1 273 ASN 273 272 272 ASN ASN A . n A 1 274 ASP 274 273 273 ASP ASP A . n A 1 275 ASN 275 274 274 ASN ASN A . n A 1 276 GLY 276 275 275 GLY GLY A . n A 1 277 PHE 277 276 276 PHE PHE A . n A 1 278 THR 278 277 277 THR THR A . n A 1 279 VAL 279 278 278 VAL VAL A . n A 1 280 LYS 280 279 279 LYS LYS A . n A 1 281 HIS 281 280 280 HIS HIS A . n A 1 282 VAL 282 281 281 VAL VAL A . n A 1 283 PRO 283 282 282 PRO PRO A . n A 1 284 ILE 284 283 283 ILE ILE A . n A 1 285 LEU 285 284 284 LEU LEU A . n A 1 286 ASP 286 285 285 ASP ASP A . n A 1 287 ASP 287 286 286 ASP ASP A . n A 1 288 LEU 288 287 287 LEU LEU A . n A 1 289 GLU 289 288 288 GLU GLU A . n A 1 290 LEU 290 289 289 LEU LEU A . n A 1 291 ASN 291 290 290 ASN ASN A . n A 1 292 HIS 292 291 291 HIS HIS A . n A 1 293 THR 293 292 292 THR THR A . n A 1 294 ALA 294 293 293 ALA ALA A . n A 1 295 GLU 295 294 294 GLU GLU A . n A 1 296 GLN 296 295 295 GLN GLN A . n A 1 297 ILE 297 296 296 ILE ILE A . n A 1 298 LEU 298 297 297 LEU LEU A . n A 1 299 ALA 299 298 298 ALA ALA A . n A 1 300 MET 300 299 299 MET MET A . n A 1 301 ALA 301 300 300 ALA ALA A . n A 1 302 ASP 302 301 301 ASP ASP A . n A 1 303 GLY 303 302 302 GLY GLY A . n A 1 304 PRO 304 303 303 PRO PRO A . n A 1 305 SER 305 304 304 SER SER A . n A 1 306 LEU 306 305 305 LEU LEU A . n A 1 307 ASN 307 306 306 ASN ASN A . n A 1 308 LYS 308 307 307 LYS LYS A . n A 1 309 ASN 309 308 308 ASN ASN A . n A 1 310 VAL 310 309 309 VAL VAL A . n A 1 311 LYS 311 310 310 LYS LYS A . n A 1 312 ARG 312 311 311 ARG ARG A . n A 1 313 GLU 313 312 312 GLU GLU A . n A 1 314 GLY 314 313 313 GLY GLY A . n A 1 315 LEU 315 314 314 LEU LEU A . n A 1 316 VAL 316 315 315 VAL VAL A . n A 1 317 PHE 317 316 316 PHE PHE A . n A 1 318 LYS 318 317 317 LYS LYS A . n A 1 319 ARG 319 318 318 ARG ARG A . n A 1 320 LEU 320 319 319 LEU LEU A . n A 1 321 ASP 321 320 320 ASP ASP A . n A 1 322 GLY 322 321 321 GLY GLY A . n A 1 323 LYS 323 322 322 LYS LYS A . n A 1 324 PHE 324 323 323 PHE PHE A . n A 1 325 SER 325 324 324 SER SER A . n A 1 326 PHE 326 325 325 PHE PHE A . n A 1 327 LYS 327 326 326 LYS LYS A . n A 1 328 ALA 328 327 327 ALA ALA A . n A 1 329 ILE 329 328 328 ILE ILE A . n A 1 330 SER 330 329 329 SER SER A . n A 1 331 ASN 331 330 330 ASN ASN A . n A 1 332 ALA 332 331 331 ALA ALA A . n A 1 333 TYR 333 332 332 TYR TYR A . n A 1 334 LEU 334 333 333 LEU LEU A . n A 1 335 GLU 335 334 334 GLU GLU A . n A 1 336 LYS 336 335 335 LYS LYS A . n A 1 337 HIS 337 336 336 HIS HIS A . n A 1 338 LYS 338 337 337 LYS LYS A . n A 1 339 ASP 339 338 338 ASP ASP A . n A 1 340 ARG 340 339 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ATP 1 401 401 ATP ATP A . C 3 MN 1 402 402 MN MN A . D 4 HOH 1 501 4 HOH HOH A . D 4 HOH 2 502 11 HOH HOH A . D 4 HOH 3 503 9 HOH HOH A . D 4 HOH 4 504 6 HOH HOH A . D 4 HOH 5 505 12 HOH HOH A . D 4 HOH 6 506 8 HOH HOH A . D 4 HOH 7 507 14 HOH HOH A . D 4 HOH 8 508 1 HOH HOH A . D 4 HOH 9 509 5 HOH HOH A . D 4 HOH 10 510 7 HOH HOH A . D 4 HOH 11 511 10 HOH HOH A . D 4 HOH 12 512 2 HOH HOH A . D 4 HOH 13 513 3 HOH HOH A . D 4 HOH 14 514 15 HOH HOH A . D 4 HOH 15 515 13 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 512 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 147 ? A ASP 146 ? 1_555 MN ? C MN . ? A MN 402 ? 1_555 O3G ? B ATP . ? A ATP 401 ? 1_555 149.8 ? 2 OD2 ? A ASP 147 ? A ASP 146 ? 1_555 MN ? C MN . ? A MN 402 ? 1_555 O1B ? B ATP . ? A ATP 401 ? 1_555 83.6 ? 3 O3G ? B ATP . ? A ATP 401 ? 1_555 MN ? C MN . ? A MN 402 ? 1_555 O1B ? B ATP . ? A ATP 401 ? 1_555 71.0 ? 4 OD2 ? A ASP 147 ? A ASP 146 ? 1_555 MN ? C MN . ? A MN 402 ? 1_555 O2A ? B ATP . ? A ATP 401 ? 1_555 84.1 ? 5 O3G ? B ATP . ? A ATP 401 ? 1_555 MN ? C MN . ? A MN 402 ? 1_555 O2A ? B ATP . ? A ATP 401 ? 1_555 103.6 ? 6 O1B ? B ATP . ? A ATP 401 ? 1_555 MN ? C MN . ? A MN 402 ? 1_555 O2A ? B ATP . ? A ATP 401 ? 1_555 73.9 ? 7 OD2 ? A ASP 147 ? A ASP 146 ? 1_555 MN ? C MN . ? A MN 402 ? 1_555 O ? D HOH . ? A HOH 511 ? 1_555 87.6 ? 8 O3G ? B ATP . ? A ATP 401 ? 1_555 MN ? C MN . ? A MN 402 ? 1_555 O ? D HOH . ? A HOH 511 ? 1_555 78.1 ? 9 O1B ? B ATP . ? A ATP 401 ? 1_555 MN ? C MN . ? A MN 402 ? 1_555 O ? D HOH . ? A HOH 511 ? 1_555 93.6 ? 10 O2A ? B ATP . ? A ATP 401 ? 1_555 MN ? C MN . ? A MN 402 ? 1_555 O ? D HOH . ? A HOH 511 ? 1_555 165.6 ? 11 OD2 ? A ASP 147 ? A ASP 146 ? 1_555 MN ? C MN . ? A MN 402 ? 1_555 O ? D HOH . ? A HOH 515 ? 1_555 95.9 ? 12 O3G ? B ATP . ? A ATP 401 ? 1_555 MN ? C MN . ? A MN 402 ? 1_555 O ? D HOH . ? A HOH 515 ? 1_555 106.7 ? 13 O1B ? B ATP . ? A ATP 401 ? 1_555 MN ? C MN . ? A MN 402 ? 1_555 O ? D HOH . ? A HOH 515 ? 1_555 171.4 ? 14 O2A ? B ATP . ? A ATP 401 ? 1_555 MN ? C MN . ? A MN 402 ? 1_555 O ? D HOH . ? A HOH 515 ? 1_555 114.7 ? 15 O ? D HOH . ? A HOH 511 ? 1_555 MN ? C MN . ? A MN 402 ? 1_555 O ? D HOH . ? A HOH 515 ? 1_555 77.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-04-08 2 'Structure model' 1 1 2020-05-06 3 'Structure model' 1 2 2020-06-10 4 'Structure model' 1 3 2023-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' citation 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 6 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_DOI' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 2 'Structure model' '_citation.title' 4 3 'Structure model' '_citation.journal_volume' 5 3 'Structure model' '_citation.page_first' 6 3 'Structure model' '_citation.page_last' 7 4 'Structure model' '_database_2.pdbx_DOI' 8 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -3.0824 28.1224 24.7000 0.4631 ? -0.1011 ? -0.0859 ? 0.4479 ? 0.0947 ? 0.5508 ? 6.1236 ? 0.2779 ? 2.3093 ? 4.0691 ? -0.5341 ? 5.8051 ? -0.1545 ? -0.1203 ? 0.0323 ? -0.2901 ? 0.2718 ? 0.6329 ? 0.0714 ? -0.7904 ? -0.0580 ? 2 'X-RAY DIFFRACTION' ? refined 22.5191 12.9553 20.9115 0.7700 ? 0.0929 ? -0.0723 ? 0.5754 ? -0.0540 ? 0.7074 ? 3.5289 ? -3.1014 ? -1.0188 ? 3.7907 ? 2.1812 ? 1.7959 ? 0.1297 ? 0.0044 ? 0.0817 ? 0.0913 ? 0.1897 ? -0.6102 ? 0.3919 ? 0.4197 ? -0.3415 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 4 ? ? A 117 ? ;chain 'A' and (resid 4 through 117 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? A 118 ? ? A 338 ? ;chain 'A' and (resid 118 through 338 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17.1_3660 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 5 # _pdbx_entry_details.entry_id 6VT9 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NZ A LYS 326 ? ? O1A A ATP 401 ? ? 2.10 2 1 OG A SER 91 ? ? O A HOH 501 ? ? 2.11 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OG _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 SER _pdbx_validate_symm_contact.auth_seq_id_1 131 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 OE1 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 GLU _pdbx_validate_symm_contact.auth_seq_id_2 133 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 7_555 _pdbx_validate_symm_contact.dist 2.11 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CB _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 CYS _pdbx_validate_rmsd_bond.auth_seq_id_1 34 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 SG _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 CYS _pdbx_validate_rmsd_bond.auth_seq_id_2 34 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.672 _pdbx_validate_rmsd_bond.bond_target_value 1.812 _pdbx_validate_rmsd_bond.bond_deviation -0.140 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.016 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 30 ? ? -27.07 -70.41 2 1 ASP A 53 ? ? 81.82 -8.15 3 1 TYR A 63 ? ? -119.57 52.48 4 1 GLU A 74 ? ? 46.16 25.41 5 1 GLU A 103 ? ? -67.36 1.40 6 1 ASP A 182 ? ? 75.11 -31.79 7 1 ASP A 183 ? ? -157.37 -0.84 8 1 GLN A 234 ? ? 39.68 52.28 9 1 ASN A 290 ? ? -143.25 46.47 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 VAL _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 29 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 ASP _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 30 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -139.51 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 0 ? A SER 1 2 1 Y 1 A MET 1 ? A MET 2 3 1 Y 1 A GLY 2 ? A GLY 3 4 1 Y 1 A VAL 3 ? A VAL 4 5 1 Y 1 A ARG 339 ? A ARG 340 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 ATP PG P N N 74 ATP O1G O N N 75 ATP O2G O N N 76 ATP O3G O N N 77 ATP PB P N R 78 ATP O1B O N N 79 ATP O2B O N N 80 ATP O3B O N N 81 ATP PA P N R 82 ATP O1A O N N 83 ATP O2A O N N 84 ATP O3A O N N 85 ATP "O5'" O N N 86 ATP "C5'" C N N 87 ATP "C4'" C N R 88 ATP "O4'" O N N 89 ATP "C3'" C N S 90 ATP "O3'" O N N 91 ATP "C2'" C N R 92 ATP "O2'" O N N 93 ATP "C1'" C N R 94 ATP N9 N Y N 95 ATP C8 C Y N 96 ATP N7 N Y N 97 ATP C5 C Y N 98 ATP C6 C Y N 99 ATP N6 N N N 100 ATP N1 N Y N 101 ATP C2 C Y N 102 ATP N3 N Y N 103 ATP C4 C Y N 104 ATP HOG2 H N N 105 ATP HOG3 H N N 106 ATP HOB2 H N N 107 ATP HOA2 H N N 108 ATP "H5'1" H N N 109 ATP "H5'2" H N N 110 ATP "H4'" H N N 111 ATP "H3'" H N N 112 ATP "HO3'" H N N 113 ATP "H2'" H N N 114 ATP "HO2'" H N N 115 ATP "H1'" H N N 116 ATP H8 H N N 117 ATP HN61 H N N 118 ATP HN62 H N N 119 ATP H2 H N N 120 CYS N N N N 121 CYS CA C N R 122 CYS C C N N 123 CYS O O N N 124 CYS CB C N N 125 CYS SG S N N 126 CYS OXT O N N 127 CYS H H N N 128 CYS H2 H N N 129 CYS HA H N N 130 CYS HB2 H N N 131 CYS HB3 H N N 132 CYS HG H N N 133 CYS HXT H N N 134 GLN N N N N 135 GLN CA C N S 136 GLN C C N N 137 GLN O O N N 138 GLN CB C N N 139 GLN CG C N N 140 GLN CD C N N 141 GLN OE1 O N N 142 GLN NE2 N N N 143 GLN OXT O N N 144 GLN H H N N 145 GLN H2 H N N 146 GLN HA H N N 147 GLN HB2 H N N 148 GLN HB3 H N N 149 GLN HG2 H N N 150 GLN HG3 H N N 151 GLN HE21 H N N 152 GLN HE22 H N N 153 GLN HXT H N N 154 GLU N N N N 155 GLU CA C N S 156 GLU C C N N 157 GLU O O N N 158 GLU CB C N N 159 GLU CG C N N 160 GLU CD C N N 161 GLU OE1 O N N 162 GLU OE2 O N N 163 GLU OXT O N N 164 GLU H H N N 165 GLU H2 H N N 166 GLU HA H N N 167 GLU HB2 H N N 168 GLU HB3 H N N 169 GLU HG2 H N N 170 GLU HG3 H N N 171 GLU HE2 H N N 172 GLU HXT H N N 173 GLY N N N N 174 GLY CA C N N 175 GLY C C N N 176 GLY O O N N 177 GLY OXT O N N 178 GLY H H N N 179 GLY H2 H N N 180 GLY HA2 H N N 181 GLY HA3 H N N 182 GLY HXT H N N 183 HIS N N N N 184 HIS CA C N S 185 HIS C C N N 186 HIS O O N N 187 HIS CB C N N 188 HIS CG C Y N 189 HIS ND1 N Y N 190 HIS CD2 C Y N 191 HIS CE1 C Y N 192 HIS NE2 N Y N 193 HIS OXT O N N 194 HIS H H N N 195 HIS H2 H N N 196 HIS HA H N N 197 HIS HB2 H N N 198 HIS HB3 H N N 199 HIS HD1 H N N 200 HIS HD2 H N N 201 HIS HE1 H N N 202 HIS HE2 H N N 203 HIS HXT H N N 204 HOH O O N N 205 HOH H1 H N N 206 HOH H2 H N N 207 ILE N N N N 208 ILE CA C N S 209 ILE C C N N 210 ILE O O N N 211 ILE CB C N S 212 ILE CG1 C N N 213 ILE CG2 C N N 214 ILE CD1 C N N 215 ILE OXT O N N 216 ILE H H N N 217 ILE H2 H N N 218 ILE HA H N N 219 ILE HB H N N 220 ILE HG12 H N N 221 ILE HG13 H N N 222 ILE HG21 H N N 223 ILE HG22 H N N 224 ILE HG23 H N N 225 ILE HD11 H N N 226 ILE HD12 H N N 227 ILE HD13 H N N 228 ILE HXT H N N 229 LEU N N N N 230 LEU CA C N S 231 LEU C C N N 232 LEU O O N N 233 LEU CB C N N 234 LEU CG C N N 235 LEU CD1 C N N 236 LEU CD2 C N N 237 LEU OXT O N N 238 LEU H H N N 239 LEU H2 H N N 240 LEU HA H N N 241 LEU HB2 H N N 242 LEU HB3 H N N 243 LEU HG H N N 244 LEU HD11 H N N 245 LEU HD12 H N N 246 LEU HD13 H N N 247 LEU HD21 H N N 248 LEU HD22 H N N 249 LEU HD23 H N N 250 LEU HXT H N N 251 LYS N N N N 252 LYS CA C N S 253 LYS C C N N 254 LYS O O N N 255 LYS CB C N N 256 LYS CG C N N 257 LYS CD C N N 258 LYS CE C N N 259 LYS NZ N N N 260 LYS OXT O N N 261 LYS H H N N 262 LYS H2 H N N 263 LYS HA H N N 264 LYS HB2 H N N 265 LYS HB3 H N N 266 LYS HG2 H N N 267 LYS HG3 H N N 268 LYS HD2 H N N 269 LYS HD3 H N N 270 LYS HE2 H N N 271 LYS HE3 H N N 272 LYS HZ1 H N N 273 LYS HZ2 H N N 274 LYS HZ3 H N N 275 LYS HXT H N N 276 MET N N N N 277 MET CA C N S 278 MET C C N N 279 MET O O N N 280 MET CB C N N 281 MET CG C N N 282 MET SD S N N 283 MET CE C N N 284 MET OXT O N N 285 MET H H N N 286 MET H2 H N N 287 MET HA H N N 288 MET HB2 H N N 289 MET HB3 H N N 290 MET HG2 H N N 291 MET HG3 H N N 292 MET HE1 H N N 293 MET HE2 H N N 294 MET HE3 H N N 295 MET HXT H N N 296 MN MN MN N N 297 PHE N N N N 298 PHE CA C N S 299 PHE C C N N 300 PHE O O N N 301 PHE CB C N N 302 PHE CG C Y N 303 PHE CD1 C Y N 304 PHE CD2 C Y N 305 PHE CE1 C Y N 306 PHE CE2 C Y N 307 PHE CZ C Y N 308 PHE OXT O N N 309 PHE H H N N 310 PHE H2 H N N 311 PHE HA H N N 312 PHE HB2 H N N 313 PHE HB3 H N N 314 PHE HD1 H N N 315 PHE HD2 H N N 316 PHE HE1 H N N 317 PHE HE2 H N N 318 PHE HZ H N N 319 PHE HXT H N N 320 PRO N N N N 321 PRO CA C N S 322 PRO C C N N 323 PRO O O N N 324 PRO CB C N N 325 PRO CG C N N 326 PRO CD C N N 327 PRO OXT O N N 328 PRO H H N N 329 PRO HA H N N 330 PRO HB2 H N N 331 PRO HB3 H N N 332 PRO HG2 H N N 333 PRO HG3 H N N 334 PRO HD2 H N N 335 PRO HD3 H N N 336 PRO HXT H N N 337 SER N N N N 338 SER CA C N S 339 SER C C N N 340 SER O O N N 341 SER CB C N N 342 SER OG O N N 343 SER OXT O N N 344 SER H H N N 345 SER H2 H N N 346 SER HA H N N 347 SER HB2 H N N 348 SER HB3 H N N 349 SER HG H N N 350 SER HXT H N N 351 THR N N N N 352 THR CA C N S 353 THR C C N N 354 THR O O N N 355 THR CB C N R 356 THR OG1 O N N 357 THR CG2 C N N 358 THR OXT O N N 359 THR H H N N 360 THR H2 H N N 361 THR HA H N N 362 THR HB H N N 363 THR HG1 H N N 364 THR HG21 H N N 365 THR HG22 H N N 366 THR HG23 H N N 367 THR HXT H N N 368 TRP N N N N 369 TRP CA C N S 370 TRP C C N N 371 TRP O O N N 372 TRP CB C N N 373 TRP CG C Y N 374 TRP CD1 C Y N 375 TRP CD2 C Y N 376 TRP NE1 N Y N 377 TRP CE2 C Y N 378 TRP CE3 C Y N 379 TRP CZ2 C Y N 380 TRP CZ3 C Y N 381 TRP CH2 C Y N 382 TRP OXT O N N 383 TRP H H N N 384 TRP H2 H N N 385 TRP HA H N N 386 TRP HB2 H N N 387 TRP HB3 H N N 388 TRP HD1 H N N 389 TRP HE1 H N N 390 TRP HE3 H N N 391 TRP HZ2 H N N 392 TRP HZ3 H N N 393 TRP HH2 H N N 394 TRP HXT H N N 395 TYR N N N N 396 TYR CA C N S 397 TYR C C N N 398 TYR O O N N 399 TYR CB C N N 400 TYR CG C Y N 401 TYR CD1 C Y N 402 TYR CD2 C Y N 403 TYR CE1 C Y N 404 TYR CE2 C Y N 405 TYR CZ C Y N 406 TYR OH O N N 407 TYR OXT O N N 408 TYR H H N N 409 TYR H2 H N N 410 TYR HA H N N 411 TYR HB2 H N N 412 TYR HB3 H N N 413 TYR HD1 H N N 414 TYR HD2 H N N 415 TYR HE1 H N N 416 TYR HE2 H N N 417 TYR HH H N N 418 TYR HXT H N N 419 VAL N N N N 420 VAL CA C N S 421 VAL C C N N 422 VAL O O N N 423 VAL CB C N N 424 VAL CG1 C N N 425 VAL CG2 C N N 426 VAL OXT O N N 427 VAL H H N N 428 VAL H2 H N N 429 VAL HA H N N 430 VAL HB H N N 431 VAL HG11 H N N 432 VAL HG12 H N N 433 VAL HG13 H N N 434 VAL HG21 H N N 435 VAL HG22 H N N 436 VAL HG23 H N N 437 VAL HXT H N N 438 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 ATP PG O1G doub N N 70 ATP PG O2G sing N N 71 ATP PG O3G sing N N 72 ATP PG O3B sing N N 73 ATP O2G HOG2 sing N N 74 ATP O3G HOG3 sing N N 75 ATP PB O1B doub N N 76 ATP PB O2B sing N N 77 ATP PB O3B sing N N 78 ATP PB O3A sing N N 79 ATP O2B HOB2 sing N N 80 ATP PA O1A doub N N 81 ATP PA O2A sing N N 82 ATP PA O3A sing N N 83 ATP PA "O5'" sing N N 84 ATP O2A HOA2 sing N N 85 ATP "O5'" "C5'" sing N N 86 ATP "C5'" "C4'" sing N N 87 ATP "C5'" "H5'1" sing N N 88 ATP "C5'" "H5'2" sing N N 89 ATP "C4'" "O4'" sing N N 90 ATP "C4'" "C3'" sing N N 91 ATP "C4'" "H4'" sing N N 92 ATP "O4'" "C1'" sing N N 93 ATP "C3'" "O3'" sing N N 94 ATP "C3'" "C2'" sing N N 95 ATP "C3'" "H3'" sing N N 96 ATP "O3'" "HO3'" sing N N 97 ATP "C2'" "O2'" sing N N 98 ATP "C2'" "C1'" sing N N 99 ATP "C2'" "H2'" sing N N 100 ATP "O2'" "HO2'" sing N N 101 ATP "C1'" N9 sing N N 102 ATP "C1'" "H1'" sing N N 103 ATP N9 C8 sing Y N 104 ATP N9 C4 sing Y N 105 ATP C8 N7 doub Y N 106 ATP C8 H8 sing N N 107 ATP N7 C5 sing Y N 108 ATP C5 C6 sing Y N 109 ATP C5 C4 doub Y N 110 ATP C6 N6 sing N N 111 ATP C6 N1 doub Y N 112 ATP N6 HN61 sing N N 113 ATP N6 HN62 sing N N 114 ATP N1 C2 sing Y N 115 ATP C2 N3 doub Y N 116 ATP C2 H2 sing N N 117 ATP N3 C4 sing Y N 118 CYS N CA sing N N 119 CYS N H sing N N 120 CYS N H2 sing N N 121 CYS CA C sing N N 122 CYS CA CB sing N N 123 CYS CA HA sing N N 124 CYS C O doub N N 125 CYS C OXT sing N N 126 CYS CB SG sing N N 127 CYS CB HB2 sing N N 128 CYS CB HB3 sing N N 129 CYS SG HG sing N N 130 CYS OXT HXT sing N N 131 GLN N CA sing N N 132 GLN N H sing N N 133 GLN N H2 sing N N 134 GLN CA C sing N N 135 GLN CA CB sing N N 136 GLN CA HA sing N N 137 GLN C O doub N N 138 GLN C OXT sing N N 139 GLN CB CG sing N N 140 GLN CB HB2 sing N N 141 GLN CB HB3 sing N N 142 GLN CG CD sing N N 143 GLN CG HG2 sing N N 144 GLN CG HG3 sing N N 145 GLN CD OE1 doub N N 146 GLN CD NE2 sing N N 147 GLN NE2 HE21 sing N N 148 GLN NE2 HE22 sing N N 149 GLN OXT HXT sing N N 150 GLU N CA sing N N 151 GLU N H sing N N 152 GLU N H2 sing N N 153 GLU CA C sing N N 154 GLU CA CB sing N N 155 GLU CA HA sing N N 156 GLU C O doub N N 157 GLU C OXT sing N N 158 GLU CB CG sing N N 159 GLU CB HB2 sing N N 160 GLU CB HB3 sing N N 161 GLU CG CD sing N N 162 GLU CG HG2 sing N N 163 GLU CG HG3 sing N N 164 GLU CD OE1 doub N N 165 GLU CD OE2 sing N N 166 GLU OE2 HE2 sing N N 167 GLU OXT HXT sing N N 168 GLY N CA sing N N 169 GLY N H sing N N 170 GLY N H2 sing N N 171 GLY CA C sing N N 172 GLY CA HA2 sing N N 173 GLY CA HA3 sing N N 174 GLY C O doub N N 175 GLY C OXT sing N N 176 GLY OXT HXT sing N N 177 HIS N CA sing N N 178 HIS N H sing N N 179 HIS N H2 sing N N 180 HIS CA C sing N N 181 HIS CA CB sing N N 182 HIS CA HA sing N N 183 HIS C O doub N N 184 HIS C OXT sing N N 185 HIS CB CG sing N N 186 HIS CB HB2 sing N N 187 HIS CB HB3 sing N N 188 HIS CG ND1 sing Y N 189 HIS CG CD2 doub Y N 190 HIS ND1 CE1 doub Y N 191 HIS ND1 HD1 sing N N 192 HIS CD2 NE2 sing Y N 193 HIS CD2 HD2 sing N N 194 HIS CE1 NE2 sing Y N 195 HIS CE1 HE1 sing N N 196 HIS NE2 HE2 sing N N 197 HIS OXT HXT sing N N 198 HOH O H1 sing N N 199 HOH O H2 sing N N 200 ILE N CA sing N N 201 ILE N H sing N N 202 ILE N H2 sing N N 203 ILE CA C sing N N 204 ILE CA CB sing N N 205 ILE CA HA sing N N 206 ILE C O doub N N 207 ILE C OXT sing N N 208 ILE CB CG1 sing N N 209 ILE CB CG2 sing N N 210 ILE CB HB sing N N 211 ILE CG1 CD1 sing N N 212 ILE CG1 HG12 sing N N 213 ILE CG1 HG13 sing N N 214 ILE CG2 HG21 sing N N 215 ILE CG2 HG22 sing N N 216 ILE CG2 HG23 sing N N 217 ILE CD1 HD11 sing N N 218 ILE CD1 HD12 sing N N 219 ILE CD1 HD13 sing N N 220 ILE OXT HXT sing N N 221 LEU N CA sing N N 222 LEU N H sing N N 223 LEU N H2 sing N N 224 LEU CA C sing N N 225 LEU CA CB sing N N 226 LEU CA HA sing N N 227 LEU C O doub N N 228 LEU C OXT sing N N 229 LEU CB CG sing N N 230 LEU CB HB2 sing N N 231 LEU CB HB3 sing N N 232 LEU CG CD1 sing N N 233 LEU CG CD2 sing N N 234 LEU CG HG sing N N 235 LEU CD1 HD11 sing N N 236 LEU CD1 HD12 sing N N 237 LEU CD1 HD13 sing N N 238 LEU CD2 HD21 sing N N 239 LEU CD2 HD22 sing N N 240 LEU CD2 HD23 sing N N 241 LEU OXT HXT sing N N 242 LYS N CA sing N N 243 LYS N H sing N N 244 LYS N H2 sing N N 245 LYS CA C sing N N 246 LYS CA CB sing N N 247 LYS CA HA sing N N 248 LYS C O doub N N 249 LYS C OXT sing N N 250 LYS CB CG sing N N 251 LYS CB HB2 sing N N 252 LYS CB HB3 sing N N 253 LYS CG CD sing N N 254 LYS CG HG2 sing N N 255 LYS CG HG3 sing N N 256 LYS CD CE sing N N 257 LYS CD HD2 sing N N 258 LYS CD HD3 sing N N 259 LYS CE NZ sing N N 260 LYS CE HE2 sing N N 261 LYS CE HE3 sing N N 262 LYS NZ HZ1 sing N N 263 LYS NZ HZ2 sing N N 264 LYS NZ HZ3 sing N N 265 LYS OXT HXT sing N N 266 MET N CA sing N N 267 MET N H sing N N 268 MET N H2 sing N N 269 MET CA C sing N N 270 MET CA CB sing N N 271 MET CA HA sing N N 272 MET C O doub N N 273 MET C OXT sing N N 274 MET CB CG sing N N 275 MET CB HB2 sing N N 276 MET CB HB3 sing N N 277 MET CG SD sing N N 278 MET CG HG2 sing N N 279 MET CG HG3 sing N N 280 MET SD CE sing N N 281 MET CE HE1 sing N N 282 MET CE HE2 sing N N 283 MET CE HE3 sing N N 284 MET OXT HXT sing N N 285 PHE N CA sing N N 286 PHE N H sing N N 287 PHE N H2 sing N N 288 PHE CA C sing N N 289 PHE CA CB sing N N 290 PHE CA HA sing N N 291 PHE C O doub N N 292 PHE C OXT sing N N 293 PHE CB CG sing N N 294 PHE CB HB2 sing N N 295 PHE CB HB3 sing N N 296 PHE CG CD1 doub Y N 297 PHE CG CD2 sing Y N 298 PHE CD1 CE1 sing Y N 299 PHE CD1 HD1 sing N N 300 PHE CD2 CE2 doub Y N 301 PHE CD2 HD2 sing N N 302 PHE CE1 CZ doub Y N 303 PHE CE1 HE1 sing N N 304 PHE CE2 CZ sing Y N 305 PHE CE2 HE2 sing N N 306 PHE CZ HZ sing N N 307 PHE OXT HXT sing N N 308 PRO N CA sing N N 309 PRO N CD sing N N 310 PRO N H sing N N 311 PRO CA C sing N N 312 PRO CA CB sing N N 313 PRO CA HA sing N N 314 PRO C O doub N N 315 PRO C OXT sing N N 316 PRO CB CG sing N N 317 PRO CB HB2 sing N N 318 PRO CB HB3 sing N N 319 PRO CG CD sing N N 320 PRO CG HG2 sing N N 321 PRO CG HG3 sing N N 322 PRO CD HD2 sing N N 323 PRO CD HD3 sing N N 324 PRO OXT HXT sing N N 325 SER N CA sing N N 326 SER N H sing N N 327 SER N H2 sing N N 328 SER CA C sing N N 329 SER CA CB sing N N 330 SER CA HA sing N N 331 SER C O doub N N 332 SER C OXT sing N N 333 SER CB OG sing N N 334 SER CB HB2 sing N N 335 SER CB HB3 sing N N 336 SER OG HG sing N N 337 SER OXT HXT sing N N 338 THR N CA sing N N 339 THR N H sing N N 340 THR N H2 sing N N 341 THR CA C sing N N 342 THR CA CB sing N N 343 THR CA HA sing N N 344 THR C O doub N N 345 THR C OXT sing N N 346 THR CB OG1 sing N N 347 THR CB CG2 sing N N 348 THR CB HB sing N N 349 THR OG1 HG1 sing N N 350 THR CG2 HG21 sing N N 351 THR CG2 HG22 sing N N 352 THR CG2 HG23 sing N N 353 THR OXT HXT sing N N 354 TRP N CA sing N N 355 TRP N H sing N N 356 TRP N H2 sing N N 357 TRP CA C sing N N 358 TRP CA CB sing N N 359 TRP CA HA sing N N 360 TRP C O doub N N 361 TRP C OXT sing N N 362 TRP CB CG sing N N 363 TRP CB HB2 sing N N 364 TRP CB HB3 sing N N 365 TRP CG CD1 doub Y N 366 TRP CG CD2 sing Y N 367 TRP CD1 NE1 sing Y N 368 TRP CD1 HD1 sing N N 369 TRP CD2 CE2 doub Y N 370 TRP CD2 CE3 sing Y N 371 TRP NE1 CE2 sing Y N 372 TRP NE1 HE1 sing N N 373 TRP CE2 CZ2 sing Y N 374 TRP CE3 CZ3 doub Y N 375 TRP CE3 HE3 sing N N 376 TRP CZ2 CH2 doub Y N 377 TRP CZ2 HZ2 sing N N 378 TRP CZ3 CH2 sing Y N 379 TRP CZ3 HZ3 sing N N 380 TRP CH2 HH2 sing N N 381 TRP OXT HXT sing N N 382 TYR N CA sing N N 383 TYR N H sing N N 384 TYR N H2 sing N N 385 TYR CA C sing N N 386 TYR CA CB sing N N 387 TYR CA HA sing N N 388 TYR C O doub N N 389 TYR C OXT sing N N 390 TYR CB CG sing N N 391 TYR CB HB2 sing N N 392 TYR CB HB3 sing N N 393 TYR CG CD1 doub Y N 394 TYR CG CD2 sing Y N 395 TYR CD1 CE1 sing Y N 396 TYR CD1 HD1 sing N N 397 TYR CD2 CE2 doub Y N 398 TYR CD2 HD2 sing N N 399 TYR CE1 CZ doub Y N 400 TYR CE1 HE1 sing N N 401 TYR CE2 CZ sing Y N 402 TYR CE2 HE2 sing N N 403 TYR CZ OH sing N N 404 TYR OH HH sing N N 405 TYR OXT HXT sing N N 406 VAL N CA sing N N 407 VAL N H sing N N 408 VAL N H2 sing N N 409 VAL CA C sing N N 410 VAL CA CB sing N N 411 VAL CA HA sing N N 412 VAL C O doub N N 413 VAL C OXT sing N N 414 VAL CB CG1 sing N N 415 VAL CB CG2 sing N N 416 VAL CB HB sing N N 417 VAL CG1 HG11 sing N N 418 VAL CG1 HG12 sing N N 419 VAL CG1 HG13 sing N N 420 VAL CG2 HG21 sing N N 421 VAL CG2 HG22 sing N N 422 VAL CG2 HG23 sing N N 423 VAL OXT HXT sing N N 424 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number R35-GM126945 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 ATP ? ? ATP ? ? 'SUBJECT OF INVESTIGATION' ? 2 MN ? ? MN ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "ADENOSINE-5'-TRIPHOSPHATE" ATP 3 'MANGANESE (II) ION' MN 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5COT _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #