HEADER LYASE 04-MAR-20 6W1K TITLE CRYSTAL STRUCTURE OF THE HYDROXYGLUTARATE SYNTHASE IN COMPLEX WITH 2- TITLE 2 OXOADIPATE FROM ORYZA SATIVA COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYDROXYGLUTARATE SYNTHASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYZA SATIVA; SOURCE 3 ORGANISM_COMMON: RICE; SOURCE 4 ORGANISM_TAXID: 4530; SOURCE 5 GENE: OSJ_31810, OSJNBA0071K18.7; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DECARBOXYLASE LYSINE CATABOLISM, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR J.H.PEREIRA,M.G.THOMPSON,J.M.BLAKE-HEDGES,J.D.KEASLING,P.D.ADAMS REVDAT 2 18-OCT-23 6W1K 1 LINK REVDAT 1 24-JUN-20 6W1K 0 JRNL AUTH M.G.THOMPSON,J.M.BLAKE-HEDGES,J.H.PEREIRA,J.A.HANGASKY, JRNL AUTH 2 M.S.BELCHER,W.M.MOORE,J.F.BARAJAS,P.CRUZ-MORALES, JRNL AUTH 3 L.J.WASHINGTON,R.W.HAUSHALTER,C.B.EIBEN,Y.LIU,W.SKYRUD, JRNL AUTH 4 V.T.BENITES,T.P.BARNUM,E.E.K.BAIDOO,H.V.SCHELLER, JRNL AUTH 5 M.A.MARLETTA,P.M.SHIH,P.D.ADAMS,J.D.KEASLING JRNL TITL AN IRON (II) DEPENDENT OXYGENASE PERFORMS THE LAST MISSING JRNL TITL 2 STEP OF PLANT LYSINE CATABOLISM. JRNL REF NAT COMMUN V. 11 2931 2020 JRNL REFN ESSN 2041-1723 JRNL PMID 32523014 JRNL DOI 10.1038/S41467-020-16815-3 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 156470 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.950 REMARK 3 FREE R VALUE TEST SET COUNT : 7752 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.7900 - 5.7400 0.98 5231 276 0.1933 0.1799 REMARK 3 2 5.7400 - 4.5600 1.00 5144 284 0.1409 0.1725 REMARK 3 3 4.5600 - 3.9800 0.97 4980 227 0.1214 0.1355 REMARK 3 4 3.9800 - 3.6200 0.99 5075 246 0.1427 0.1663 REMARK 3 5 3.6200 - 3.3600 1.00 5063 239 0.1574 0.1728 REMARK 3 6 3.3600 - 3.1600 1.00 4998 263 0.1651 0.1881 REMARK 3 7 3.1600 - 3.0000 1.00 5025 254 0.1694 0.1952 REMARK 3 8 3.0000 - 2.8700 1.00 5024 257 0.1619 0.2127 REMARK 3 9 2.8700 - 2.7600 0.97 4840 276 0.1584 0.1940 REMARK 3 10 2.7600 - 2.6700 1.00 4992 251 0.1563 0.1923 REMARK 3 11 2.6700 - 2.5800 1.00 4973 239 0.1533 0.1682 REMARK 3 12 2.5800 - 2.5100 1.00 5019 252 0.1545 0.1889 REMARK 3 13 2.5100 - 2.4400 0.99 4955 256 0.1524 0.2007 REMARK 3 14 2.4400 - 2.3900 0.99 4951 259 0.1515 0.1848 REMARK 3 15 2.3800 - 2.3300 0.99 4940 263 0.1573 0.1950 REMARK 3 16 2.3300 - 2.2800 0.99 4916 276 0.1542 0.1862 REMARK 3 17 2.2800 - 2.2400 0.99 4967 258 0.1524 0.2093 REMARK 3 18 2.2400 - 2.1900 0.99 4933 272 0.1597 0.2132 REMARK 3 19 2.1900 - 2.1500 0.97 4800 269 0.1706 0.2102 REMARK 3 20 2.1500 - 2.1200 0.99 4936 279 0.1811 0.2168 REMARK 3 21 2.1200 - 2.0800 0.99 4889 264 0.1869 0.2326 REMARK 3 22 2.0800 - 2.0500 0.99 4895 252 0.1972 0.2338 REMARK 3 23 2.0500 - 2.0200 0.99 4937 250 0.2096 0.2491 REMARK 3 24 2.0200 - 1.9900 0.99 4954 246 0.2296 0.2614 REMARK 3 25 1.9900 - 1.9700 0.99 4866 256 0.2269 0.2692 REMARK 3 26 1.9700 - 1.9400 0.99 4931 240 0.2343 0.2599 REMARK 3 27 1.9400 - 1.9200 0.99 4897 271 0.2414 0.2807 REMARK 3 28 1.9200 - 1.8900 0.98 4826 280 0.2494 0.2924 REMARK 3 29 1.8900 - 1.8700 0.99 4921 246 0.2701 0.3097 REMARK 3 30 1.8700 - 1.8500 0.99 4840 251 0.2999 0.3189 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.189 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.19 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 10149 REMARK 3 ANGLE : 1.086 13764 REMARK 3 CHIRALITY : 0.059 1475 REMARK 3 PLANARITY : 0.008 1795 REMARK 3 DIHEDRAL : 18.187 3701 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6W1K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1000247489. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-FEB-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 156493 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 39.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.91 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3LHO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.01 M MAGNESIUM CHLORIDE, 0.05 M MES REMARK 280 PH 5.6, 1.8 M LITHIUM SULFATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 46.15000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 101.90000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.10000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 101.90000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 46.15000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.10000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 2 REMARK 465 ARG A 315 REMARK 465 SER A 316 REMARK 465 ALA A 317 REMARK 465 HIS A 318 REMARK 465 HIS A 319 REMARK 465 HIS A 320 REMARK 465 HIS A 321 REMARK 465 HIS A 322 REMARK 465 HIS A 323 REMARK 465 ALA B 2 REMARK 465 ALA B 3 REMARK 465 ALA B 4 REMARK 465 ALA B 5 REMARK 465 SER B 6 REMARK 465 ALA B 7 REMARK 465 PRO B 8 REMARK 465 PRO B 9 REMARK 465 ALA B 10 REMARK 465 ALA B 317 REMARK 465 HIS B 318 REMARK 465 HIS B 319 REMARK 465 HIS B 320 REMARK 465 HIS B 321 REMARK 465 HIS B 322 REMARK 465 HIS B 323 REMARK 465 ALA C 2 REMARK 465 ALA C 3 REMARK 465 ALA C 4 REMARK 465 ALA C 5 REMARK 465 SER C 6 REMARK 465 ALA C 7 REMARK 465 PRO C 8 REMARK 465 PRO C 9 REMARK 465 ALA C 10 REMARK 465 SER C 316 REMARK 465 ALA C 317 REMARK 465 HIS C 318 REMARK 465 HIS C 319 REMARK 465 HIS C 320 REMARK 465 HIS C 321 REMARK 465 HIS C 322 REMARK 465 HIS C 323 REMARK 465 ALA D 2 REMARK 465 ALA D 3 REMARK 465 ALA D 4 REMARK 465 ALA D 5 REMARK 465 SER D 6 REMARK 465 ALA D 7 REMARK 465 PRO D 8 REMARK 465 PRO D 9 REMARK 465 ALA D 10 REMARK 465 SER D 316 REMARK 465 ALA D 317 REMARK 465 HIS D 318 REMARK 465 HIS D 319 REMARK 465 HIS D 320 REMARK 465 HIS D 321 REMARK 465 HIS D 322 REMARK 465 HIS D 323 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HA VAL D 176 O HOH D 505 1.51 REMARK 500 HZ3 LYS C 150 O HOH C 501 1.55 REMARK 500 OD2 ASP C 69 HE22 GLN C 142 1.60 REMARK 500 O HOH B 570 O HOH B 600 1.61 REMARK 500 O HOH B 504 O HOH B 600 1.80 REMARK 500 O HOH A 720 O HOH A 725 1.88 REMARK 500 O HOH A 717 O HOH A 760 1.98 REMARK 500 O HOH D 746 O HOH D 785 2.02 REMARK 500 NZ LYS C 150 O HOH C 501 2.03 REMARK 500 O HOH B 580 O HOH B 716 2.03 REMARK 500 O HOH A 702 O HOH A 768 2.05 REMARK 500 O HOH B 666 O HOH B 691 2.05 REMARK 500 O HOH B 552 O HOH B 717 2.07 REMARK 500 O HOH B 698 O HOH B 713 2.08 REMARK 500 O HOH A 768 O HOH A 773 2.08 REMARK 500 O HOH A 720 O HOH D 734 2.10 REMARK 500 O HOH B 674 O HOH B 681 2.12 REMARK 500 O HOH C 677 O HOH C 705 2.13 REMARK 500 O HOH D 747 O HOH D 791 2.15 REMARK 500 O HOH D 724 O HOH D 747 2.18 REMARK 500 O HOH D 782 O HOH D 796 2.18 REMARK 500 O HOH D 509 O HOH D 565 2.19 REMARK 500 O HOH C 687 O HOH C 692 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 235 C PRO A 236 N 0.138 REMARK 500 ARG B 179 NE ARG B 179 CZ -0.105 REMARK 500 ARG B 179 CZ ARG B 179 NH1 0.117 REMARK 500 ARG B 179 CZ ARG B 179 NH2 -0.135 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 179 CD - NE - CZ ANGL. DEV. = 10.1 DEGREES REMARK 500 ARG B 179 NE - CZ - NH1 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG B 179 NE - CZ - NH2 ANGL. DEV. = 4.9 DEGREES REMARK 500 ARG D 99 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG D 99 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 LYS D 279 CD - CE - NZ ANGL. DEV. = -14.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 83 40.03 -106.05 REMARK 500 ARG A 88 -128.69 -118.89 REMARK 500 HIS A 154 42.75 -140.55 REMARK 500 ARG A 264 -136.17 -100.81 REMARK 500 ALA B 12 35.40 -162.92 REMARK 500 ARG B 88 -120.79 -121.04 REMARK 500 ASN B 108 79.42 -150.28 REMARK 500 HIS B 154 46.41 -140.50 REMARK 500 ARG B 264 -131.34 -108.07 REMARK 500 ARG B 315 150.08 103.96 REMARK 500 PHE C 83 41.41 -107.82 REMARK 500 ARG C 88 -113.03 -110.41 REMARK 500 ASN C 108 69.33 -150.39 REMARK 500 ARG C 264 -133.02 -106.13 REMARK 500 HIS D 154 40.18 -142.68 REMARK 500 ARG D 264 -137.85 -104.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 783 DISTANCE = 5.86 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 401 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 60 NE2 REMARK 620 2 HIS A 196 NE2 102.8 REMARK 620 3 GLU A 268 OE1 106.4 91.8 REMARK 620 4 OOG A 402 O3 93.2 163.9 85.9 REMARK 620 5 OOG A 402 O5 116.2 94.7 134.0 75.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 401 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 60 NE2 REMARK 620 2 HIS B 196 NE2 99.0 REMARK 620 3 GLU B 268 OE2 108.6 92.3 REMARK 620 4 OOG B 402 O5 112.6 92.8 137.0 REMARK 620 5 OOG B 402 O3 96.9 163.0 88.2 75.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI C 403 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 60 NE2 REMARK 620 2 HIS C 196 NE2 98.2 REMARK 620 3 GLU C 268 OE2 113.7 89.7 REMARK 620 4 OOG C 404 O3 97.1 164.0 88.3 REMARK 620 5 OOG C 404 O5 109.0 92.6 136.3 78.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI D 401 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 60 NE2 REMARK 620 2 HIS D 196 NE2 95.8 REMARK 620 3 GLU D 268 OE2 111.5 90.3 REMARK 620 4 OOG D 402 O3 98.6 164.3 90.2 REMARK 620 5 OOG D 402 O5 114.5 94.2 133.1 74.3 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OOG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OOG B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI C 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OOG C 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI D 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OOG D 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 406 DBREF 6W1K A 2 317 UNP Q8H916 Q8H916_ORYSJ 2 317 DBREF 6W1K B 2 317 UNP Q8H916 Q8H916_ORYSJ 2 317 DBREF 6W1K C 2 317 UNP Q8H916 Q8H916_ORYSJ 2 317 DBREF 6W1K D 2 317 UNP Q8H916 Q8H916_ORYSJ 2 317 SEQADV 6W1K HIS A 318 UNP Q8H916 EXPRESSION TAG SEQADV 6W1K HIS A 319 UNP Q8H916 EXPRESSION TAG SEQADV 6W1K HIS A 320 UNP Q8H916 EXPRESSION TAG SEQADV 6W1K HIS A 321 UNP Q8H916 EXPRESSION TAG SEQADV 6W1K HIS A 322 UNP Q8H916 EXPRESSION TAG SEQADV 6W1K HIS A 323 UNP Q8H916 EXPRESSION TAG SEQADV 6W1K HIS B 318 UNP Q8H916 EXPRESSION TAG SEQADV 6W1K HIS B 319 UNP Q8H916 EXPRESSION TAG SEQADV 6W1K HIS B 320 UNP Q8H916 EXPRESSION TAG SEQADV 6W1K HIS B 321 UNP Q8H916 EXPRESSION TAG SEQADV 6W1K HIS B 322 UNP Q8H916 EXPRESSION TAG SEQADV 6W1K HIS B 323 UNP Q8H916 EXPRESSION TAG SEQADV 6W1K HIS C 318 UNP Q8H916 EXPRESSION TAG SEQADV 6W1K HIS C 319 UNP Q8H916 EXPRESSION TAG SEQADV 6W1K HIS C 320 UNP Q8H916 EXPRESSION TAG SEQADV 6W1K HIS C 321 UNP Q8H916 EXPRESSION TAG SEQADV 6W1K HIS C 322 UNP Q8H916 EXPRESSION TAG SEQADV 6W1K HIS C 323 UNP Q8H916 EXPRESSION TAG SEQADV 6W1K HIS D 318 UNP Q8H916 EXPRESSION TAG SEQADV 6W1K HIS D 319 UNP Q8H916 EXPRESSION TAG SEQADV 6W1K HIS D 320 UNP Q8H916 EXPRESSION TAG SEQADV 6W1K HIS D 321 UNP Q8H916 EXPRESSION TAG SEQADV 6W1K HIS D 322 UNP Q8H916 EXPRESSION TAG SEQADV 6W1K HIS D 323 UNP Q8H916 EXPRESSION TAG SEQRES 1 A 322 ALA ALA ALA ALA SER ALA PRO PRO ALA PRO ALA ASP ALA SEQRES 2 A 322 LEU PRO LYS GLY ALA ASP SER PHE PHE ARG THR VAL ILE SEQRES 3 A 322 SER ASN MET GLU LYS VAL TYR LEU SER ARG ASN PRO THR SEQRES 4 A 322 ALA LYS THR ILE LEU GLU LEU VAL ARG SER TYR ASP GLY SEQRES 5 A 322 ASP HIS ILE CYS TYR ASP HIS PHE ALA PHE ARG THR PHE SEQRES 6 A 322 GLY VAL ASP GLY TYR GLY ILE LYS SER LEU ALA GLU PHE SEQRES 7 A 322 PHE THR ASP PHE GLY TYR VAL PRO ARG GLU GLU LEU ARG SEQRES 8 A 322 PHE PRO ALA LYS LYS LEU ARG ALA LEU TRP PHE SER PRO SEQRES 9 A 322 PRO THR ASN ASP GLY TYR THR GLY THR GLY VAL TYR GLY SEQRES 10 A 322 PRO LEU PRO ARG ILE PHE ILE SER GLU LEU LEU VAL ASP SEQRES 11 A 322 GLU LEU SER PRO GLN SER GLN ASP ILE ILE GLN LYS TYR SEQRES 12 A 322 ILE ARG THR SER GLY LYS GLY ASN LYS HIS ALA THR LEU SEQRES 13 A 322 ALA SER THR SER GLY GLU LEU THR TRP GLU LYS PRO ILE SEQRES 14 A 322 TYR SER ASP PHE GLN VAL LEU SER ARG GLU SER GLU TYR SEQRES 15 A 322 ALA ALA TRP THR LEU VAL ASN GLY TYR ALA LEU ASN HIS SEQRES 16 A 322 THR THR ILE SER THR HIS ARG LEU ILE SER ASP ILE ARG SEQRES 17 A 322 SER ILE ASN LYS PHE ASN LYS PHE VAL GLU ASP ASN GLY SEQRES 18 A 322 PHE LYS LEU ASN SER GLU GLY GLY ILE LEU LYS VAL SER SEQRES 19 A 322 PRO ASP GLY LEU LEU GLN GLN SER SER THR VAL ALA ASP SEQRES 20 A 322 SER ALA LEU PHE THR PHE ALA ASP GLY ILE THR GLU SER SEQRES 21 A 322 ILE PRO ARG SER TYR ILE GLU PHE ALA GLU ARG LEU VAL SEQRES 22 A 322 LEU PRO GLN PHE LYS ASP LEU PRO ASN ASP GLU VAL ASN SEQRES 23 A 322 GLU HIS HIS ARG ARG ASP GLY PHE GLU VAL GLY ASN ALA SEQRES 24 A 322 ASP LYS ILE PHE GLU SER THR SER ASN ASP GLN LEU THR SEQRES 25 A 322 ARG ARG SER ALA HIS HIS HIS HIS HIS HIS SEQRES 1 B 322 ALA ALA ALA ALA SER ALA PRO PRO ALA PRO ALA ASP ALA SEQRES 2 B 322 LEU PRO LYS GLY ALA ASP SER PHE PHE ARG THR VAL ILE SEQRES 3 B 322 SER ASN MET GLU LYS VAL TYR LEU SER ARG ASN PRO THR SEQRES 4 B 322 ALA LYS THR ILE LEU GLU LEU VAL ARG SER TYR ASP GLY SEQRES 5 B 322 ASP HIS ILE CYS TYR ASP HIS PHE ALA PHE ARG THR PHE SEQRES 6 B 322 GLY VAL ASP GLY TYR GLY ILE LYS SER LEU ALA GLU PHE SEQRES 7 B 322 PHE THR ASP PHE GLY TYR VAL PRO ARG GLU GLU LEU ARG SEQRES 8 B 322 PHE PRO ALA LYS LYS LEU ARG ALA LEU TRP PHE SER PRO SEQRES 9 B 322 PRO THR ASN ASP GLY TYR THR GLY THR GLY VAL TYR GLY SEQRES 10 B 322 PRO LEU PRO ARG ILE PHE ILE SER GLU LEU LEU VAL ASP SEQRES 11 B 322 GLU LEU SER PRO GLN SER GLN ASP ILE ILE GLN LYS TYR SEQRES 12 B 322 ILE ARG THR SER GLY LYS GLY ASN LYS HIS ALA THR LEU SEQRES 13 B 322 ALA SER THR SER GLY GLU LEU THR TRP GLU LYS PRO ILE SEQRES 14 B 322 TYR SER ASP PHE GLN VAL LEU SER ARG GLU SER GLU TYR SEQRES 15 B 322 ALA ALA TRP THR LEU VAL ASN GLY TYR ALA LEU ASN HIS SEQRES 16 B 322 THR THR ILE SER THR HIS ARG LEU ILE SER ASP ILE ARG SEQRES 17 B 322 SER ILE ASN LYS PHE ASN LYS PHE VAL GLU ASP ASN GLY SEQRES 18 B 322 PHE LYS LEU ASN SER GLU GLY GLY ILE LEU LYS VAL SER SEQRES 19 B 322 PRO ASP GLY LEU LEU GLN GLN SER SER THR VAL ALA ASP SEQRES 20 B 322 SER ALA LEU PHE THR PHE ALA ASP GLY ILE THR GLU SER SEQRES 21 B 322 ILE PRO ARG SER TYR ILE GLU PHE ALA GLU ARG LEU VAL SEQRES 22 B 322 LEU PRO GLN PHE LYS ASP LEU PRO ASN ASP GLU VAL ASN SEQRES 23 B 322 GLU HIS HIS ARG ARG ASP GLY PHE GLU VAL GLY ASN ALA SEQRES 24 B 322 ASP LYS ILE PHE GLU SER THR SER ASN ASP GLN LEU THR SEQRES 25 B 322 ARG ARG SER ALA HIS HIS HIS HIS HIS HIS SEQRES 1 C 322 ALA ALA ALA ALA SER ALA PRO PRO ALA PRO ALA ASP ALA SEQRES 2 C 322 LEU PRO LYS GLY ALA ASP SER PHE PHE ARG THR VAL ILE SEQRES 3 C 322 SER ASN MET GLU LYS VAL TYR LEU SER ARG ASN PRO THR SEQRES 4 C 322 ALA LYS THR ILE LEU GLU LEU VAL ARG SER TYR ASP GLY SEQRES 5 C 322 ASP HIS ILE CYS TYR ASP HIS PHE ALA PHE ARG THR PHE SEQRES 6 C 322 GLY VAL ASP GLY TYR GLY ILE LYS SER LEU ALA GLU PHE SEQRES 7 C 322 PHE THR ASP PHE GLY TYR VAL PRO ARG GLU GLU LEU ARG SEQRES 8 C 322 PHE PRO ALA LYS LYS LEU ARG ALA LEU TRP PHE SER PRO SEQRES 9 C 322 PRO THR ASN ASP GLY TYR THR GLY THR GLY VAL TYR GLY SEQRES 10 C 322 PRO LEU PRO ARG ILE PHE ILE SER GLU LEU LEU VAL ASP SEQRES 11 C 322 GLU LEU SER PRO GLN SER GLN ASP ILE ILE GLN LYS TYR SEQRES 12 C 322 ILE ARG THR SER GLY LYS GLY ASN LYS HIS ALA THR LEU SEQRES 13 C 322 ALA SER THR SER GLY GLU LEU THR TRP GLU LYS PRO ILE SEQRES 14 C 322 TYR SER ASP PHE GLN VAL LEU SER ARG GLU SER GLU TYR SEQRES 15 C 322 ALA ALA TRP THR LEU VAL ASN GLY TYR ALA LEU ASN HIS SEQRES 16 C 322 THR THR ILE SER THR HIS ARG LEU ILE SER ASP ILE ARG SEQRES 17 C 322 SER ILE ASN LYS PHE ASN LYS PHE VAL GLU ASP ASN GLY SEQRES 18 C 322 PHE LYS LEU ASN SER GLU GLY GLY ILE LEU LYS VAL SER SEQRES 19 C 322 PRO ASP GLY LEU LEU GLN GLN SER SER THR VAL ALA ASP SEQRES 20 C 322 SER ALA LEU PHE THR PHE ALA ASP GLY ILE THR GLU SER SEQRES 21 C 322 ILE PRO ARG SER TYR ILE GLU PHE ALA GLU ARG LEU VAL SEQRES 22 C 322 LEU PRO GLN PHE LYS ASP LEU PRO ASN ASP GLU VAL ASN SEQRES 23 C 322 GLU HIS HIS ARG ARG ASP GLY PHE GLU VAL GLY ASN ALA SEQRES 24 C 322 ASP LYS ILE PHE GLU SER THR SER ASN ASP GLN LEU THR SEQRES 25 C 322 ARG ARG SER ALA HIS HIS HIS HIS HIS HIS SEQRES 1 D 322 ALA ALA ALA ALA SER ALA PRO PRO ALA PRO ALA ASP ALA SEQRES 2 D 322 LEU PRO LYS GLY ALA ASP SER PHE PHE ARG THR VAL ILE SEQRES 3 D 322 SER ASN MET GLU LYS VAL TYR LEU SER ARG ASN PRO THR SEQRES 4 D 322 ALA LYS THR ILE LEU GLU LEU VAL ARG SER TYR ASP GLY SEQRES 5 D 322 ASP HIS ILE CYS TYR ASP HIS PHE ALA PHE ARG THR PHE SEQRES 6 D 322 GLY VAL ASP GLY TYR GLY ILE LYS SER LEU ALA GLU PHE SEQRES 7 D 322 PHE THR ASP PHE GLY TYR VAL PRO ARG GLU GLU LEU ARG SEQRES 8 D 322 PHE PRO ALA LYS LYS LEU ARG ALA LEU TRP PHE SER PRO SEQRES 9 D 322 PRO THR ASN ASP GLY TYR THR GLY THR GLY VAL TYR GLY SEQRES 10 D 322 PRO LEU PRO ARG ILE PHE ILE SER GLU LEU LEU VAL ASP SEQRES 11 D 322 GLU LEU SER PRO GLN SER GLN ASP ILE ILE GLN LYS TYR SEQRES 12 D 322 ILE ARG THR SER GLY LYS GLY ASN LYS HIS ALA THR LEU SEQRES 13 D 322 ALA SER THR SER GLY GLU LEU THR TRP GLU LYS PRO ILE SEQRES 14 D 322 TYR SER ASP PHE GLN VAL LEU SER ARG GLU SER GLU TYR SEQRES 15 D 322 ALA ALA TRP THR LEU VAL ASN GLY TYR ALA LEU ASN HIS SEQRES 16 D 322 THR THR ILE SER THR HIS ARG LEU ILE SER ASP ILE ARG SEQRES 17 D 322 SER ILE ASN LYS PHE ASN LYS PHE VAL GLU ASP ASN GLY SEQRES 18 D 322 PHE LYS LEU ASN SER GLU GLY GLY ILE LEU LYS VAL SER SEQRES 19 D 322 PRO ASP GLY LEU LEU GLN GLN SER SER THR VAL ALA ASP SEQRES 20 D 322 SER ALA LEU PHE THR PHE ALA ASP GLY ILE THR GLU SER SEQRES 21 D 322 ILE PRO ARG SER TYR ILE GLU PHE ALA GLU ARG LEU VAL SEQRES 22 D 322 LEU PRO GLN PHE LYS ASP LEU PRO ASN ASP GLU VAL ASN SEQRES 23 D 322 GLU HIS HIS ARG ARG ASP GLY PHE GLU VAL GLY ASN ALA SEQRES 24 D 322 ASP LYS ILE PHE GLU SER THR SER ASN ASP GLN LEU THR SEQRES 25 D 322 ARG ARG SER ALA HIS HIS HIS HIS HIS HIS HET NI A 401 1 HET OOG A 402 19 HET SO4 A 403 5 HET SO4 A 404 5 HET NI B 401 1 HET OOG B 402 19 HET SO4 B 403 5 HET SO4 B 404 5 HET SO4 B 405 5 HET SO4 B 406 5 HET SO4 B 407 5 HET SO4 C 401 5 HET SO4 C 402 5 HET NI C 403 1 HET OOG C 404 19 HET SO4 C 405 5 HET SO4 C 406 5 HET SO4 C 407 5 HET NI D 401 1 HET OOG D 402 19 HET SO4 D 403 5 HET SO4 D 404 5 HET SO4 D 405 5 HET SO4 D 406 5 HETNAM NI NICKEL (II) ION HETNAM OOG 2-OXOADIPIC ACID HETNAM SO4 SULFATE ION FORMUL 5 NI 4(NI 2+) FORMUL 6 OOG 4(C6 H8 O5) FORMUL 7 SO4 16(O4 S 2-) FORMUL 29 HOH *1123(H2 O) HELIX 1 AA1 PRO A 16 ASN A 38 1 23 HELIX 2 AA2 ASN A 38 GLY A 53 1 16 HELIX 3 AA3 GLY A 72 PHE A 83 1 12 HELIX 4 AA4 THR A 114 GLY A 118 5 5 HELIX 5 AA5 VAL A 130 LEU A 133 5 4 HELIX 6 AA6 SER A 134 GLY A 149 1 16 HELIX 7 AA7 LYS A 150 LYS A 153 5 4 HELIX 8 AA8 HIS A 154 GLY A 162 1 9 HELIX 9 AA9 ILE A 170 SER A 181 1 12 HELIX 10 AB1 SER A 181 GLY A 191 1 11 HELIX 11 AB2 HIS A 202 LEU A 204 5 3 HELIX 12 AB3 SER A 206 ARG A 209 5 4 HELIX 13 AB4 SER A 210 ASN A 221 1 12 HELIX 14 AB5 LEU A 275 LYS A 279 5 5 HELIX 15 AB6 PRO A 282 VAL A 286 5 5 HELIX 16 AB7 ASN A 287 ARG A 291 5 5 HELIX 17 AB8 GLU A 296 PHE A 304 1 9 HELIX 18 AB9 GLU A 305 THR A 307 5 3 HELIX 19 AC1 SER A 308 THR A 313 1 6 HELIX 20 AC2 PRO B 16 ASN B 38 1 23 HELIX 21 AC3 ASN B 38 GLY B 53 1 16 HELIX 22 AC4 GLY B 72 PHE B 83 1 12 HELIX 23 AC5 THR B 114 GLY B 118 5 5 HELIX 24 AC6 VAL B 130 LEU B 133 5 4 HELIX 25 AC7 SER B 134 SER B 148 1 15 HELIX 26 AC8 GLY B 149 LYS B 153 5 5 HELIX 27 AC9 HIS B 154 GLY B 162 1 9 HELIX 28 AD1 ILE B 170 SER B 181 1 12 HELIX 29 AD2 SER B 181 GLY B 191 1 11 HELIX 30 AD3 HIS B 202 LEU B 204 5 3 HELIX 31 AD4 SER B 206 ARG B 209 5 4 HELIX 32 AD5 SER B 210 ASN B 221 1 12 HELIX 33 AD6 LEU B 275 LYS B 279 5 5 HELIX 34 AD7 ASN B 287 ARG B 291 5 5 HELIX 35 AD8 GLU B 296 PHE B 304 1 9 HELIX 36 AD9 GLU B 305 THR B 307 5 3 HELIX 37 AE1 SER B 308 THR B 313 1 6 HELIX 38 AE2 PRO C 16 ASN C 38 1 23 HELIX 39 AE3 ASN C 38 GLY C 53 1 16 HELIX 40 AE4 GLY C 72 PHE C 83 1 12 HELIX 41 AE5 THR C 114 GLY C 118 5 5 HELIX 42 AE6 VAL C 130 LEU C 133 5 4 HELIX 43 AE7 SER C 134 GLY C 149 1 16 HELIX 44 AE8 LYS C 150 LYS C 153 5 4 HELIX 45 AE9 HIS C 154 GLY C 162 1 9 HELIX 46 AF1 ILE C 170 SER C 181 1 12 HELIX 47 AF2 SER C 181 GLY C 191 1 11 HELIX 48 AF3 HIS C 202 LEU C 204 5 3 HELIX 49 AF4 SER C 206 ARG C 209 5 4 HELIX 50 AF5 SER C 210 ASN C 221 1 12 HELIX 51 AF6 LEU C 275 LYS C 279 5 5 HELIX 52 AF7 PRO C 282 VAL C 286 5 5 HELIX 53 AF8 ASN C 287 ARG C 291 5 5 HELIX 54 AF9 GLU C 296 PHE C 304 1 9 HELIX 55 AG1 GLU C 305 THR C 307 5 3 HELIX 56 AG2 SER C 308 ARG C 314 1 7 HELIX 57 AG3 PRO D 16 ASN D 38 1 23 HELIX 58 AG4 ASN D 38 GLY D 53 1 16 HELIX 59 AG5 GLY D 72 PHE D 83 1 12 HELIX 60 AG6 THR D 114 GLY D 118 5 5 HELIX 61 AG7 VAL D 130 LEU D 133 5 4 HELIX 62 AG8 SER D 134 SER D 148 1 15 HELIX 63 AG9 GLY D 149 LYS D 153 5 5 HELIX 64 AH1 HIS D 154 GLY D 162 1 9 HELIX 65 AH2 ILE D 170 SER D 181 1 12 HELIX 66 AH3 SER D 181 GLY D 191 1 11 HELIX 67 AH4 HIS D 202 LEU D 204 5 3 HELIX 68 AH5 SER D 206 ARG D 209 5 4 HELIX 69 AH6 SER D 210 ASN D 221 1 12 HELIX 70 AH7 LEU D 275 LYS D 279 5 5 HELIX 71 AH8 PRO D 282 VAL D 286 5 5 HELIX 72 AH9 ASN D 287 ARG D 291 5 5 HELIX 73 AI1 GLU D 296 PHE D 304 1 9 HELIX 74 AI2 GLU D 305 THR D 307 5 3 HELIX 75 AI3 SER D 308 THR D 313 1 6 SHEET 1 AA1 8 VAL A 86 PHE A 93 0 SHEET 2 AA1 8 LEU A 98 SER A 104 -1 O TRP A 102 N ARG A 88 SHEET 3 AA1 8 ARG A 122 LEU A 128 -1 O GLU A 127 N ARG A 99 SHEET 4 AA1 8 TYR A 58 PHE A 66 1 N PHE A 61 O PHE A 124 SHEET 5 AA1 8 HIS A 196 SER A 200 -1 O THR A 198 N ASP A 59 SHEET 6 AA1 8 TYR A 266 ARG A 272 1 O GLU A 268 N ILE A 199 SHEET 7 AA1 8 LEU A 240 SER A 244 -1 N SER A 243 O PHE A 269 SHEET 8 AA1 8 LYS A 233 VAL A 234 -1 N LYS A 233 O GLN A 242 SHEET 1 AA2 2 SER A 249 THR A 253 0 SHEET 2 AA2 2 THR A 259 PRO A 263 -1 O ILE A 262 N ALA A 250 SHEET 1 AA3 8 VAL B 86 PHE B 93 0 SHEET 2 AA3 8 LEU B 98 SER B 104 -1 O TRP B 102 N ARG B 88 SHEET 3 AA3 8 ARG B 122 LEU B 128 -1 O GLU B 127 N ARG B 99 SHEET 4 AA3 8 TYR B 58 PHE B 66 1 N PHE B 61 O PHE B 124 SHEET 5 AA3 8 HIS B 196 SER B 200 -1 O THR B 198 N ASP B 59 SHEET 6 AA3 8 TYR B 266 ARG B 272 1 O GLU B 268 N ILE B 199 SHEET 7 AA3 8 LEU B 240 SER B 244 -1 N SER B 243 O PHE B 269 SHEET 8 AA3 8 LYS B 233 VAL B 234 -1 N LYS B 233 O GLN B 242 SHEET 1 AA4 2 SER B 249 THR B 253 0 SHEET 2 AA4 2 THR B 259 PRO B 263 -1 O ILE B 262 N ALA B 250 SHEET 1 AA5 8 VAL C 86 PHE C 93 0 SHEET 2 AA5 8 LEU C 98 SER C 104 -1 O TRP C 102 N ARG C 88 SHEET 3 AA5 8 ARG C 122 LEU C 128 -1 O ILE C 125 N LEU C 101 SHEET 4 AA5 8 TYR C 58 PHE C 66 1 N PHE C 61 O PHE C 124 SHEET 5 AA5 8 HIS C 196 SER C 200 -1 O THR C 198 N ASP C 59 SHEET 6 AA5 8 TYR C 266 ARG C 272 1 O GLU C 268 N ILE C 199 SHEET 7 AA5 8 LEU C 240 SER C 244 -1 N GLN C 241 O GLU C 271 SHEET 8 AA5 8 LYS C 233 VAL C 234 -1 N LYS C 233 O GLN C 242 SHEET 1 AA6 2 SER C 249 THR C 253 0 SHEET 2 AA6 2 THR C 259 PRO C 263 -1 O GLU C 260 N PHE C 252 SHEET 1 AA7 8 VAL D 86 PHE D 93 0 SHEET 2 AA7 8 LEU D 98 SER D 104 -1 O TRP D 102 N ARG D 88 SHEET 3 AA7 8 ARG D 122 LEU D 128 -1 O ILE D 125 N LEU D 101 SHEET 4 AA7 8 TYR D 58 PHE D 66 1 N PHE D 61 O PHE D 124 SHEET 5 AA7 8 HIS D 196 SER D 200 -1 O THR D 198 N ASP D 59 SHEET 6 AA7 8 TYR D 266 ARG D 272 1 O GLU D 268 N ILE D 199 SHEET 7 AA7 8 LEU D 240 SER D 244 -1 N GLN D 241 O GLU D 271 SHEET 8 AA7 8 LYS D 233 VAL D 234 -1 N LYS D 233 O GLN D 242 SHEET 1 AA8 2 SER D 249 THR D 253 0 SHEET 2 AA8 2 THR D 259 PRO D 263 -1 O ILE D 262 N ALA D 250 LINK NE2 HIS A 60 NI NI A 401 1555 1555 2.09 LINK NE2 HIS A 196 NI NI A 401 1555 1555 2.17 LINK OE1 GLU A 268 NI NI A 401 1555 1555 1.90 LINK NI NI A 401 O3 OOG A 402 1555 1555 2.35 LINK NI NI A 401 O5 OOG A 402 1555 1555 2.13 LINK NE2 HIS B 60 NI NI B 401 1555 1555 2.12 LINK NE2 HIS B 196 NI NI B 401 1555 1555 2.19 LINK OE2 GLU B 268 NI NI B 401 1555 1555 1.84 LINK NI NI B 401 O5 OOG B 402 1555 1555 2.16 LINK NI NI B 401 O3 OOG B 402 1555 1555 2.35 LINK NE2 HIS C 60 NI NI C 403 1555 1555 2.13 LINK NE2 HIS C 196 NI NI C 403 1555 1555 2.24 LINK OE2 GLU C 268 NI NI C 403 1555 1555 1.96 LINK NI NI C 403 O3 OOG C 404 1555 1555 2.21 LINK NI NI C 403 O5 OOG C 404 1555 1555 2.20 LINK NE2 HIS D 60 NI NI D 401 1555 1555 2.09 LINK NE2 HIS D 196 NI NI D 401 1555 1555 2.18 LINK OE2 GLU D 268 NI NI D 401 1555 1555 1.86 LINK NI NI D 401 O3 OOG D 402 1555 1555 2.32 LINK NI NI D 401 O5 OOG D 402 1555 1555 2.23 SITE 1 AC1 4 HIS A 60 HIS A 196 GLU A 268 OOG A 402 SITE 1 AC2 12 HIS A 60 ARG A 64 ASN A 195 HIS A 196 SITE 2 AC2 12 GLN A 242 TYR A 266 GLU A 268 ALA A 300 SITE 3 AC2 12 PHE A 304 NI A 401 HOH A 516 HOH A 568 SITE 1 AC3 2 ARG A 49 HOH A 564 SITE 1 AC4 2 ASP A 207 ARG A 209 SITE 1 AC5 4 HIS B 60 HIS B 196 GLU B 268 OOG B 402 SITE 1 AC6 12 HIS B 60 ARG B 64 ASN B 195 HIS B 196 SITE 2 AC6 12 GLN B 242 TYR B 266 GLU B 268 ALA B 300 SITE 3 AC6 12 PHE B 304 NI B 401 HOH B 528 HOH B 591 SITE 1 AC7 4 TYR B 111 ARG B 203 GLU B 288 HOH B 637 SITE 1 AC8 2 LYS B 224 ARG B 314 SITE 1 AC9 10 ILE A 258 THR A 259 ARG B 88 SER B 104 SITE 2 AC9 10 HIS B 289 ASP B 293 HOH B 507 HOH B 516 SITE 3 AC9 10 HOH B 518 HOH B 564 SITE 1 AD1 4 SER B 210 ASN B 212 LYS B 213 HOH B 514 SITE 1 AD2 3 ASP B 207 ARG B 209 HOH B 510 SITE 1 AD3 4 SER C 181 GLU C 182 HOH C 503 HOH C 649 SITE 1 AD4 5 GLU B 167 LYS B 168 SER C 21 HOH C 518 SITE 2 AD4 5 HOH D 627 SITE 1 AD5 4 HIS C 60 HIS C 196 GLU C 268 OOG C 404 SITE 1 AD6 12 HIS C 60 ARG C 64 ASN C 195 HIS C 196 SITE 2 AD6 12 GLN C 242 TYR C 266 GLU C 268 ALA C 300 SITE 3 AD6 12 PHE C 304 NI C 403 HOH C 555 HOH C 579 SITE 1 AD7 5 TYR C 111 ARG C 203 ASN C 287 GLU C 288 SITE 2 AD7 5 HOH C 527 SITE 1 AD8 2 LYS C 224 ARG C 314 SITE 1 AD9 2 LYS C 224 ARG C 315 SITE 1 AE1 4 HIS D 60 HIS D 196 GLU D 268 OOG D 402 SITE 1 AE2 12 HIS D 60 ARG D 64 ASN D 195 HIS D 196 SITE 2 AE2 12 GLN D 242 TYR D 266 GLU D 268 ALA D 300 SITE 3 AE2 12 PHE D 304 NI D 401 HOH D 573 HOH D 594 SITE 1 AE3 8 ARG D 146 LEU D 273 VAL D 274 LYS D 279 SITE 2 AE3 8 HOH D 503 HOH D 613 HOH D 645 HOH D 686 SITE 1 AE4 7 GLN B 175 ARG B 179 HOH B 521 HOH B 611 SITE 2 AE4 7 ARG D 179 HOH D 505 HOH D 527 SITE 1 AE5 4 GLY D 230 ILE D 231 HOH D 518 HOH D 549 SITE 1 AE6 2 ARG D 209 HOH D 673 CRYST1 92.300 98.200 203.800 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010834 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010183 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004907 0.00000