HEADER VIRAL PROTEIN 27-FEB-20 6Y6Q TITLE STRUCTURE OF ANDES VIRUS ENVELOPE GLYCOPROTEIN GC IN POSTFUSION TITLE 2 CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENVELOPE POLYPROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: M POLYPROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANDES ORTHOHANTAVIRUS; SOURCE 3 ORGANISM_TAXID: 1980456; SOURCE 4 GENE: M, ADT63_77597GPM, ADT63_77598GPM; SOURCE 5 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FRUIT FLY; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7227; SOURCE 8 EXPRESSION_SYSTEM_CELL: SCHNEIDER S2 CELLS; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PT350 KEYWDS CLASS-II FUSION PROTEIN HANTAVIRUS BUNYAVIRUS, VIRAL PROTEIN, KEYWDS 2 POSTFUSION CONFORMATION EXPDTA X-RAY DIFFRACTION AUTHOR A.SERRIS,F.A.REY,P.GUARDADO-CALVO REVDAT 3 24-JAN-24 6Y6Q 1 REMARK REVDAT 2 28-OCT-20 6Y6Q 1 JRNL REVDAT 1 14-OCT-20 6Y6Q 0 JRNL AUTH A.SERRIS,R.STASS,E.A.BIGNON,N.A.MUENA,J.C.MANUGUERRA, JRNL AUTH 2 R.K.JANGRA,S.LI,K.CHANDRAN,N.D.TISCHLER,J.T.HUISKONEN, JRNL AUTH 3 F.A.REY,P.GUARDADO-CALVO JRNL TITL THE HANTAVIRUS SURFACE GLYCOPROTEIN LATTICE AND ITS FUSION JRNL TITL 2 CONTROL MECHANISM. JRNL REF CELL V. 183 442 2020 JRNL REFN ISSN 1097-4172 JRNL PMID 32937107 JRNL DOI 10.1016/J.CELL.2020.08.023 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14RC3 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.050 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 14734 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.237 REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.840 REMARK 3 FREE R VALUE TEST SET COUNT : 1338 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.8030 - 5.8119 0.99 2643 146 0.2197 0.2406 REMARK 3 2 5.8119 - 4.6153 1.00 2658 157 0.1859 0.2314 REMARK 3 3 4.6153 - 4.0326 1.00 2658 128 0.1971 0.2908 REMARK 3 4 4.0326 - 3.6642 1.00 2650 139 0.2461 0.3002 REMARK 3 5 3.6642 - 3.4017 0.99 2632 137 0.2510 0.3347 REMARK 3 6 3.4017 - 3.2012 0.98 2642 115 0.2664 0.3322 REMARK 3 7 3.2012 - 3.0409 0.98 2632 127 0.2983 0.3831 REMARK 3 8 3.0409 - 2.9086 0.98 2568 131 0.3138 0.3912 REMARK 3 9 2.9086 - 2.7967 0.97 2605 136 0.3342 0.4530 REMARK 3 10 2.7967 - 2.7002 0.98 2625 122 0.3770 0.3422 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 38.520 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 98.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 947:1069) REMARK 3 ORIGIN FOR THE GROUP (A): -19.2109 41.4486 -31.7666 REMARK 3 T TENSOR REMARK 3 T11: 1.1992 T22: 1.2939 REMARK 3 T33: 0.7644 T12: -0.0724 REMARK 3 T13: 0.1740 T23: 0.0163 REMARK 3 L TENSOR REMARK 3 L11: 1.1782 L22: 1.0335 REMARK 3 L33: 1.6783 L12: 0.1323 REMARK 3 L13: 1.2802 L23: 0.1931 REMARK 3 S TENSOR REMARK 3 S11: -0.0681 S12: -0.3874 S13: -0.2062 REMARK 3 S21: 0.4601 S22: -0.0462 S23: 0.3097 REMARK 3 S31: 0.4326 S32: -0.7248 S33: 0.0002 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 659:750) REMARK 3 ORIGIN FOR THE GROUP (A): -1.3578 38.3819 -39.9698 REMARK 3 T TENSOR REMARK 3 T11: 0.9701 T22: 1.1209 REMARK 3 T33: 0.6506 T12: 0.0518 REMARK 3 T13: 0.0444 T23: 0.0226 REMARK 3 L TENSOR REMARK 3 L11: 0.8055 L22: 1.6221 REMARK 3 L33: 1.1991 L12: 0.2753 REMARK 3 L13: -0.8672 L23: -0.6666 REMARK 3 S TENSOR REMARK 3 S11: -0.0382 S12: -0.2222 S13: -0.1226 REMARK 3 S21: 0.4534 S22: -0.0487 S23: 0.0893 REMARK 3 S31: 0.8330 S32: -0.5445 S33: 0.0004 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 751:795) REMARK 3 ORIGIN FOR THE GROUP (A): -0.9649 37.3480 -83.9858 REMARK 3 T TENSOR REMARK 3 T11: 1.4161 T22: 1.3142 REMARK 3 T33: 0.6882 T12: 0.0711 REMARK 3 T13: -0.0513 T23: 0.0563 REMARK 3 L TENSOR REMARK 3 L11: 1.6241 L22: 0.3517 REMARK 3 L33: 0.4827 L12: 0.4275 REMARK 3 L13: -0.4315 L23: -0.0646 REMARK 3 S TENSOR REMARK 3 S11: -0.0184 S12: 1.4988 S13: -0.1548 REMARK 3 S21: -1.2093 S22: 0.0685 S23: 0.3016 REMARK 3 S31: 1.2541 S32: -0.3030 S33: -0.0396 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 796:842) REMARK 3 ORIGIN FOR THE GROUP (A): -4.6851 39.6788 -25.3881 REMARK 3 T TENSOR REMARK 3 T11: 1.3488 T22: 1.0593 REMARK 3 T33: 0.7117 T12: 0.0522 REMARK 3 T13: 0.0610 T23: 0.0389 REMARK 3 L TENSOR REMARK 3 L11: 0.2377 L22: 0.4190 REMARK 3 L33: 0.1185 L12: -0.2980 REMARK 3 L13: 0.1242 L23: -0.1014 REMARK 3 S TENSOR REMARK 3 S11: -0.2850 S12: -0.3438 S13: -0.1293 REMARK 3 S21: 0.5122 S22: -0.1110 S23: 0.1801 REMARK 3 S31: 0.6537 S32: -0.5114 S33: 0.0001 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 843:946) REMARK 3 ORIGIN FOR THE GROUP (A): 2.8970 40.5551 -59.5517 REMARK 3 T TENSOR REMARK 3 T11: 0.8680 T22: 0.7226 REMARK 3 T33: 0.6391 T12: 0.0395 REMARK 3 T13: 0.0073 T23: 0.0155 REMARK 3 L TENSOR REMARK 3 L11: 1.8483 L22: 1.6965 REMARK 3 L33: 1.3520 L12: 1.0198 REMARK 3 L13: -0.2337 L23: 0.8540 REMARK 3 S TENSOR REMARK 3 S11: 0.0391 S12: -0.0592 S13: -0.0886 REMARK 3 S21: 0.1379 S22: 0.0241 S23: 0.1138 REMARK 3 S31: 0.3134 S32: -0.1993 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6Y6Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1292106979. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAY-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.3 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14898 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 39.803 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 9.400 REMARK 200 R MERGE (I) : 0.14000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 9.60 REMARK 200 R MERGE FOR SHELL (I) : 1.27900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.2 REMARK 200 STARTING MODEL: 5LJZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% (W/V) PEG 4000, 10% (V/V) 2 REMARK 280 -PROPANOL, 0.2M (NH4)2SO4, 0.1M HEPES PH 7.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 46.32350 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 26.74489 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 106.18167 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 46.32350 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 26.74489 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 106.18167 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 46.32350 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 26.74489 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 106.18167 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 46.32350 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 26.74489 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 106.18167 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 46.32350 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 26.74489 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 106.18167 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 46.32350 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 26.74489 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 106.18167 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 53.48977 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 212.36333 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 53.48977 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 212.36333 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 53.48977 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 212.36333 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 53.48977 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 212.36333 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 53.48977 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 212.36333 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 53.48977 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 212.36333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 48500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 46.32350 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 80.23466 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -46.32350 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 80.23466 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A1205 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 650 REMARK 465 SER A 651 REMARK 465 GLU A 652 REMARK 465 THR A 653 REMARK 465 PRO A 654 REMARK 465 LEU A 655 REMARK 465 MET A 656 REMARK 465 GLU A 657 REMARK 465 SER A 658 REMARK 465 PRO A 697 REMARK 465 ALA A 698 REMARK 465 ASN A 699 REMARK 465 LYS A 700 REMARK 465 GLU A 701 REMARK 465 GLU A 702 REMARK 465 GLY A 765 REMARK 465 TRP A 766 REMARK 465 GLY A 775 REMARK 465 VAL A 776 REMARK 465 GLY A 777 REMARK 465 THR A 778 REMARK 465 GLY A 899 REMARK 465 PHE A 900 REMARK 465 ALA A 901 REMARK 465 GLY A 1070 REMARK 465 PHE A 1071 REMARK 465 ASN A 1072 REMARK 465 GLN A 1073 REMARK 465 ILE A 1074 REMARK 465 ASP A 1075 REMARK 465 SER A 1076 REMARK 465 ASP A 1077 REMARK 465 LYS A 1078 REMARK 465 VAL A 1079 REMARK 465 TYR A 1080 REMARK 465 ASP A 1081 REMARK 465 ASP A 1082 REMARK 465 GLY A 1083 REMARK 465 ALA A 1084 REMARK 465 PRO A 1085 REMARK 465 PRO A 1086 REMARK 465 CYS A 1087 REMARK 465 THR A 1088 REMARK 465 PHE A 1089 REMARK 465 LYS A 1090 REMARK 465 CYS A 1091 REMARK 465 TRP A 1092 REMARK 465 PHE A 1093 REMARK 465 THR A 1094 REMARK 465 LYS A 1095 REMARK 465 SER A 1096 REMARK 465 GLY A 1097 REMARK 465 GLU A 1098 REMARK 465 TRP A 1099 REMARK 465 LEU A 1100 REMARK 465 LEU A 1101 REMARK 465 GLY A 1102 REMARK 465 ILE A 1103 REMARK 465 LEU A 1104 REMARK 465 ASN A 1105 REMARK 465 GLY A 1106 REMARK 465 ASN A 1107 REMARK 465 GLY A 1108 REMARK 465 PRO A 1109 REMARK 465 PHE A 1110 REMARK 465 GLU A 1111 REMARK 465 ASP A 1112 REMARK 465 ASP A 1113 REMARK 465 ASP A 1114 REMARK 465 ASP A 1115 REMARK 465 LYS A 1116 REMARK 465 ALA A 1117 REMARK 465 GLY A 1118 REMARK 465 TRP A 1119 REMARK 465 SER A 1120 REMARK 465 HIS A 1121 REMARK 465 PRO A 1122 REMARK 465 GLN A 1123 REMARK 465 PHE A 1124 REMARK 465 GLU A 1125 REMARK 465 LYS A 1126 REMARK 465 GLY A 1127 REMARK 465 GLY A 1128 REMARK 465 GLY A 1129 REMARK 465 SER A 1130 REMARK 465 GLY A 1131 REMARK 465 GLY A 1132 REMARK 465 GLY A 1133 REMARK 465 SER A 1134 REMARK 465 GLY A 1135 REMARK 465 GLY A 1136 REMARK 465 GLY A 1137 REMARK 465 SER A 1138 REMARK 465 TRP A 1139 REMARK 465 SER A 1140 REMARK 465 HIS A 1141 REMARK 465 PRO A 1142 REMARK 465 GLN A 1143 REMARK 465 PHE A 1144 REMARK 465 GLU A 1145 REMARK 465 LYS A 1146 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O TYR A 745 NE2 GLN A 816 17554 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 741 155.92 67.56 REMARK 500 SER A 746 167.77 59.67 REMARK 500 CYS A 768 -5.09 -141.01 REMARK 500 THR A 839 37.21 -77.19 REMARK 500 SER A 841 67.56 -170.57 REMARK 500 THR A 867 -56.84 -138.54 REMARK 500 ASP A 924 1.90 -65.77 REMARK 500 GLU A 933 67.33 29.57 REMARK 500 THR A 937 -169.16 -123.31 REMARK 500 PHE A1005 111.91 -160.33 REMARK 500 ASP A1013 -168.34 -119.93 REMARK 500 MET A1016 -167.55 -163.13 REMARK 500 ASP A1050 -110.66 55.89 REMARK 500 REMARK 500 REMARK: NULL DBREF 6Y6Q A 652 1107 UNP Q9E006 Q9E006_9VIRU 652 1107 SEQADV 6Y6Q ARG A 650 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q SER A 651 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q GLY A 1108 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q PRO A 1109 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q PHE A 1110 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q GLU A 1111 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q ASP A 1112 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q ASP A 1113 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q ASP A 1114 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q ASP A 1115 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q LYS A 1116 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q ALA A 1117 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q GLY A 1118 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q TRP A 1119 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q SER A 1120 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q HIS A 1121 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q PRO A 1122 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q GLN A 1123 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q PHE A 1124 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q GLU A 1125 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q LYS A 1126 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q GLY A 1127 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q GLY A 1128 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q GLY A 1129 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q SER A 1130 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q GLY A 1131 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q GLY A 1132 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q GLY A 1133 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q SER A 1134 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q GLY A 1135 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q GLY A 1136 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q GLY A 1137 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q SER A 1138 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q TRP A 1139 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q SER A 1140 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q HIS A 1141 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q PRO A 1142 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q GLN A 1143 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q PHE A 1144 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q GLU A 1145 UNP Q9E006 EXPRESSION TAG SEQADV 6Y6Q LYS A 1146 UNP Q9E006 EXPRESSION TAG SEQRES 1 A 497 ARG SER GLU THR PRO LEU MET GLU SER GLY TRP SER ASP SEQRES 2 A 497 THR ALA HIS GLY VAL GLY GLU ILE PRO MET LYS THR ASP SEQRES 3 A 497 LEU GLU LEU ASP PHE SER LEU PRO SER SER SER SER TYR SEQRES 4 A 497 SER TYR ARG ARG LYS LEU THR ASN PRO ALA ASN LYS GLU SEQRES 5 A 497 GLU SER ILE PRO PHE HIS PHE GLN MET GLU LYS GLN VAL SEQRES 6 A 497 ILE HIS ALA GLU ILE GLN PRO LEU GLY HIS TRP MET ASP SEQRES 7 A 497 ALA THR PHE ASN ILE LYS THR ALA PHE HIS CYS TYR GLY SEQRES 8 A 497 ALA CYS GLN LYS TYR SER TYR PRO TRP GLN THR SER LYS SEQRES 9 A 497 CYS PHE PHE GLU LYS ASP TYR GLN TYR GLU THR GLY TRP SEQRES 10 A 497 GLY CYS ASN PRO GLY ASP CYS PRO GLY VAL GLY THR GLY SEQRES 11 A 497 CYS THR ALA CYS GLY VAL TYR LEU ASP LYS LEU LYS SER SEQRES 12 A 497 VAL GLY LYS ALA TYR LYS ILE ILE SER LEU LYS TYR THR SEQRES 13 A 497 ARG LYS VAL CYS ILE GLN LEU GLY THR GLU GLN THR CYS SEQRES 14 A 497 LYS HIS ILE ASP ALA ASN ASP CYS LEU VAL THR PRO SER SEQRES 15 A 497 VAL LYS VAL CYS ILE VAL GLY THR VAL SER LYS LEU GLN SEQRES 16 A 497 PRO SER ASP THR LEU LEU PHE LEU GLY PRO LEU GLU GLN SEQRES 17 A 497 GLY GLY ILE ILE LEU LYS GLN TRP CYS THR THR SER CYS SEQRES 18 A 497 ALA PHE GLY ASP PRO GLY ASP ILE MET SER THR PRO SER SEQRES 19 A 497 GLY MET ARG CYS PRO GLU HIS THR GLY SER PHE ARG LYS SEQRES 20 A 497 ILE CYS GLY PHE ALA THR THR PRO VAL CYS GLU TYR GLN SEQRES 21 A 497 GLY ASN THR ILE SER GLY TYR LYS ARG MET MET ALA THR SEQRES 22 A 497 LYS ASP SER PHE GLN SER PHE ASN LEU THR GLU PRO HIS SEQRES 23 A 497 ILE THR THR ASN LYS LEU GLU TRP ILE ASP PRO ASP GLY SEQRES 24 A 497 ASN THR ARG ASP HIS VAL ASN LEU VAL LEU ASN ARG ASP SEQRES 25 A 497 VAL SER PHE GLN ASP LEU SER ASP ASN PRO CYS LYS VAL SEQRES 26 A 497 ASP LEU HIS THR GLN ALA ILE GLU GLY ALA TRP GLY SER SEQRES 27 A 497 GLY VAL GLY PHE THR LEU THR CYS THR VAL GLY LEU THR SEQRES 28 A 497 GLU CYS PRO SER PHE MET THR SER ILE LYS ALA CYS ASP SEQRES 29 A 497 LEU ALA MET CYS TYR GLY SER THR VAL THR ASN LEU ALA SEQRES 30 A 497 ARG GLY SER ASN THR VAL LYS VAL VAL GLY LYS GLY GLY SEQRES 31 A 497 HIS SER GLY SER SER PHE LYS CYS CYS HIS ASP THR ASP SEQRES 32 A 497 CYS SER SER GLU GLY LEU LEU ALA SER ALA PRO HIS LEU SEQRES 33 A 497 GLU ARG VAL THR GLY PHE ASN GLN ILE ASP SER ASP LYS SEQRES 34 A 497 VAL TYR ASP ASP GLY ALA PRO PRO CYS THR PHE LYS CYS SEQRES 35 A 497 TRP PHE THR LYS SER GLY GLU TRP LEU LEU GLY ILE LEU SEQRES 36 A 497 ASN GLY ASN GLY PRO PHE GLU ASP ASP ASP ASP LYS ALA SEQRES 37 A 497 GLY TRP SER HIS PRO GLN PHE GLU LYS GLY GLY GLY SER SEQRES 38 A 497 GLY GLY GLY SER GLY GLY GLY SER TRP SER HIS PRO GLN SEQRES 39 A 497 PHE GLU LYS HET NAG B 1 14 HET NAG B 2 14 HET BMA B 3 11 HET MAN B 4 11 HET SO4 A1205 5 HET SO4 A1206 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 NAG 2(C8 H15 N O6) FORMUL 2 BMA C6 H12 O6 FORMUL 2 MAN C6 H12 O6 FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 HOH *4(H2 O) HELIX 1 AA1 PRO A 671 LYS A 673 5 3 HELIX 2 AA2 PRO A 748 THR A 751 5 4 HELIX 3 AA3 LEU A 855 GLN A 857 5 3 HELIX 4 AA4 GLY A 915 SER A 925 1 11 SHEET 1 A 4 LEU A 676 PRO A 683 0 SHEET 2 A 4 ARG A 951 LEU A 958 -1 SHEET 3 A 4 VAL A 832 VAL A 837 -1 SHEET 4 A 4 CYS A 826 VAL A 828 -1 SHEET 1 B 4 TYR A 688 LEU A 694 0 SHEET 2 B 4 ILE A 704 MET A 710 -1 SHEET 3 B 4 THR A 805 LEU A 812 -1 SHEET 4 B 4 GLU A 815 ASP A 822 -1 SHEET 1 C 6 LYS A 940 TRP A 943 0 SHEET 2 C 6 GLN A 713 PRO A 721 -1 SHEET 3 C 6 LYS A 795 ARG A 806 -1 SHEET 4 C 6 THR A 848 PHE A 851 -1 SHEET 5 C 6 GLY A 859 LEU A 862 -1 SHEET 6 C 6 GLN A 927 PHE A 929 -1 SHEET 1 D 3 THR A 729 HIS A 737 0 SHEET 2 D 3 CYS A 780 ASP A 788 -1 SHEET 3 D 3 CYS A 754 GLN A 761 -1 SHEET 1 E 2 MET A 879 THR A 881 0 SHEET 2 E 2 GLY A 884 ARG A 886 -1 SHEET 1 F 2 SER A 893 ILE A 897 0 SHEET 2 F 2 VAL A 905 GLN A 909 -1 SHEET 1 G 3 GLY A1028 GLY A1036 0 SHEET 2 G 3 PHE A 991 THR A1000 -1 SHEET 3 G 3 LYS A 973 GLY A 983 -1 SHEET 1 H 3 LYS A1046 CYS A1048 0 SHEET 2 H 3 SER A1004 CYS A1012 -1 SHEET 3 H 3 CYS A1017 ALA A1026 -1 SHEET 1 I 2 GLY A 723 ASP A 727 0 SHEET 2 I 2 LYS A 791 ALA A 796 -1 SSBOND 1 CYS A 738 CYS A 773 1555 1555 2.03 SSBOND 2 CYS A 742 CYS A 780 1555 1555 2.03 SSBOND 3 CYS A 754 CYS A 887 1555 1555 2.03 SSBOND 4 CYS A 768 CYS A 898 1555 1555 2.03 SSBOND 5 CYS A 783 CYS A 906 1555 1555 2.03 SSBOND 6 CYS A 809 CYS A 818 1555 1555 2.04 SSBOND 7 CYS A 826 CYS A 835 1555 1555 2.03 SSBOND 8 CYS A 866 CYS A 870 1555 1555 2.03 SSBOND 9 CYS A 972 CYS A 1002 1555 1555 2.03 SSBOND 10 CYS A 995 CYS A 1047 1555 1555 2.03 SSBOND 11 CYS A 1012 CYS A 1017 1555 1555 2.03 SSBOND 12 CYS A 1048 CYS A 1053 1555 1555 2.03 LINK ND2 ASN A 930 C1 NAG B 1 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.45 LINK O6 BMA B 3 C1 MAN B 4 1555 1555 1.45 CRYST1 92.647 92.647 318.545 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010794 0.006232 0.000000 0.00000 SCALE2 0.000000 0.012463 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003139 0.00000