data_6YLP # _entry.id 6YLP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6YLP pdb_00006ylp 10.2210/pdb6ylp/pdb WWPDB D_1292106976 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-12-16 2 'Structure model' 1 1 2021-01-27 3 'Structure model' 2 0 2023-11-15 4 'Structure model' 2 1 2024-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' atom_site 4 3 'Structure model' chem_comp_atom 5 3 'Structure model' chem_comp_bond 6 3 'Structure model' database_2 7 3 'Structure model' struct_conn 8 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation_author.identifier_ORCID' 5 3 'Structure model' '_atom_site.auth_atom_id' 6 3 'Structure model' '_atom_site.label_atom_id' 7 3 'Structure model' '_database_2.pdbx_DOI' 8 3 'Structure model' '_database_2.pdbx_database_accession' 9 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 10 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 11 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6YLP _pdbx_database_status.recvd_initial_deposition_date 2020-04-07 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Myskova, J.' 1 ? 'Rybakova, O.' 2 ? 'Brynda, J.' 3 ? 'Lazar, J.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 117 _citation.language ? _citation.page_first 32395 _citation.page_last 32401 _citation.title 'Directionality of light absorption and emission in representative fluorescent proteins.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.2017379117 _citation.pdbx_database_id_PubMed 33273123 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Myskova, J.' 1 ? primary 'Rybakova, O.' 2 ? primary 'Brynda, J.' 3 ? primary 'Khoroshyy, P.' 4 ? primary 'Bondar, A.' 5 ? primary 'Lazar, J.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man eGFP_in_Acidic_env 28555.156 1 ? ? ? ? 2 non-polymer nat 'PHOSPHATE ION' 94.971 1 ? ? ? ? 3 water nat water 18.015 150 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MAHHHHHHGHHHQLVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTL (GYS)VQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLE YNYNSHNVYIMADKQKNGIKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLE FVTAAGITLGMDELYK ; _entity_poly.pdbx_seq_one_letter_code_can ;MAHHHHHHGHHHQLVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTL SYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYN YNSHNVYIMADKQKNGIKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFV TAAGITLGMDELYK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHATE ION' PO4 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 GLY n 1 10 HIS n 1 11 HIS n 1 12 HIS n 1 13 GLN n 1 14 LEU n 1 15 VAL n 1 16 SER n 1 17 LYS n 1 18 GLY n 1 19 GLU n 1 20 GLU n 1 21 LEU n 1 22 PHE n 1 23 THR n 1 24 GLY n 1 25 VAL n 1 26 VAL n 1 27 PRO n 1 28 ILE n 1 29 LEU n 1 30 VAL n 1 31 GLU n 1 32 LEU n 1 33 ASP n 1 34 GLY n 1 35 ASP n 1 36 VAL n 1 37 ASN n 1 38 GLY n 1 39 HIS n 1 40 LYS n 1 41 PHE n 1 42 SER n 1 43 VAL n 1 44 SER n 1 45 GLY n 1 46 GLU n 1 47 GLY n 1 48 GLU n 1 49 GLY n 1 50 ASP n 1 51 ALA n 1 52 THR n 1 53 TYR n 1 54 GLY n 1 55 LYS n 1 56 LEU n 1 57 THR n 1 58 LEU n 1 59 LYS n 1 60 PHE n 1 61 ILE n 1 62 CYS n 1 63 THR n 1 64 THR n 1 65 GLY n 1 66 LYS n 1 67 LEU n 1 68 PRO n 1 69 VAL n 1 70 PRO n 1 71 TRP n 1 72 PRO n 1 73 THR n 1 74 LEU n 1 75 VAL n 1 76 THR n 1 77 THR n 1 78 LEU n 1 79 GYS n 1 80 VAL n 1 81 GLN n 1 82 CYS n 1 83 PHE n 1 84 SER n 1 85 ARG n 1 86 TYR n 1 87 PRO n 1 88 ASP n 1 89 HIS n 1 90 MET n 1 91 LYS n 1 92 GLN n 1 93 HIS n 1 94 ASP n 1 95 PHE n 1 96 PHE n 1 97 LYS n 1 98 SER n 1 99 ALA n 1 100 MET n 1 101 PRO n 1 102 GLU n 1 103 GLY n 1 104 TYR n 1 105 VAL n 1 106 GLN n 1 107 GLU n 1 108 ARG n 1 109 THR n 1 110 ILE n 1 111 PHE n 1 112 PHE n 1 113 LYS n 1 114 ASP n 1 115 ASP n 1 116 GLY n 1 117 ASN n 1 118 TYR n 1 119 LYS n 1 120 THR n 1 121 ARG n 1 122 ALA n 1 123 GLU n 1 124 VAL n 1 125 LYS n 1 126 PHE n 1 127 GLU n 1 128 GLY n 1 129 ASP n 1 130 THR n 1 131 LEU n 1 132 VAL n 1 133 ASN n 1 134 ARG n 1 135 ILE n 1 136 GLU n 1 137 LEU n 1 138 LYS n 1 139 GLY n 1 140 ILE n 1 141 ASP n 1 142 PHE n 1 143 LYS n 1 144 GLU n 1 145 ASP n 1 146 GLY n 1 147 ASN n 1 148 ILE n 1 149 LEU n 1 150 GLY n 1 151 HIS n 1 152 LYS n 1 153 LEU n 1 154 GLU n 1 155 TYR n 1 156 ASN n 1 157 TYR n 1 158 ASN n 1 159 SER n 1 160 HIS n 1 161 ASN n 1 162 VAL n 1 163 TYR n 1 164 ILE n 1 165 MET n 1 166 ALA n 1 167 ASP n 1 168 LYS n 1 169 GLN n 1 170 LYS n 1 171 ASN n 1 172 GLY n 1 173 ILE n 1 174 LYS n 1 175 VAL n 1 176 ASN n 1 177 PHE n 1 178 LYS n 1 179 ILE n 1 180 ARG n 1 181 HIS n 1 182 ASN n 1 183 ILE n 1 184 GLU n 1 185 ASP n 1 186 GLY n 1 187 SER n 1 188 VAL n 1 189 GLN n 1 190 LEU n 1 191 ALA n 1 192 ASP n 1 193 HIS n 1 194 TYR n 1 195 GLN n 1 196 GLN n 1 197 ASN n 1 198 THR n 1 199 PRO n 1 200 ILE n 1 201 GLY n 1 202 ASP n 1 203 GLY n 1 204 PRO n 1 205 VAL n 1 206 LEU n 1 207 LEU n 1 208 PRO n 1 209 ASP n 1 210 ASN n 1 211 HIS n 1 212 TYR n 1 213 LEU n 1 214 SER n 1 215 THR n 1 216 GLN n 1 217 SER n 1 218 ALA n 1 219 LEU n 1 220 SER n 1 221 LYS n 1 222 ASP n 1 223 PRO n 1 224 ASN n 1 225 GLU n 1 226 LYS n 1 227 ARG n 1 228 ASP n 1 229 HIS n 1 230 MET n 1 231 VAL n 1 232 LEU n 1 233 LEU n 1 234 GLU n 1 235 PHE n 1 236 VAL n 1 237 THR n 1 238 ALA n 1 239 ALA n 1 240 GLY n 1 241 ILE n 1 242 THR n 1 243 LEU n 1 244 GLY n 1 245 MET n 1 246 ASP n 1 247 GLU n 1 248 LEU n 1 249 TYR n 1 250 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 250 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'synthetic construct' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 32630 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GYS 'L-peptide linking' n '[(4Z)-2-(1-AMINO-2-HYDROXYETHYL)-4-(4-HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC ACID' 'CHROMOPHORE (SER-TYR-GLY)' 'C14 H15 N3 O5' 305.286 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -12 ? ? ? A . n A 1 2 ALA 2 -11 ? ? ? A . n A 1 3 HIS 3 -10 ? ? ? A . n A 1 4 HIS 4 -9 ? ? ? A . n A 1 5 HIS 5 -8 ? ? ? A . n A 1 6 HIS 6 -7 ? ? ? A . n A 1 7 HIS 7 -6 ? ? ? A . n A 1 8 HIS 8 -5 ? ? ? A . n A 1 9 GLY 9 -4 ? ? ? A . n A 1 10 HIS 10 -3 ? ? ? A . n A 1 11 HIS 11 -2 ? ? ? A . n A 1 12 HIS 12 -1 ? ? ? A . n A 1 13 GLN 13 0 ? ? ? A . n A 1 14 LEU 14 1 ? ? ? A . n A 1 15 VAL 15 2 ? ? ? A . n A 1 16 SER 16 3 3 SER SER A . n A 1 17 LYS 17 4 4 LYS LYS A . n A 1 18 GLY 18 5 5 GLY GLY A . n A 1 19 GLU 19 6 6 GLU GLU A . n A 1 20 GLU 20 7 7 GLU GLU A . n A 1 21 LEU 21 8 8 LEU LEU A . n A 1 22 PHE 22 9 9 PHE PHE A . n A 1 23 THR 23 10 10 THR THR A . n A 1 24 GLY 24 11 11 GLY GLY A . n A 1 25 VAL 25 12 12 VAL VAL A . n A 1 26 VAL 26 13 13 VAL VAL A . n A 1 27 PRO 27 14 14 PRO PRO A . n A 1 28 ILE 28 15 15 ILE ILE A . n A 1 29 LEU 29 16 16 LEU LEU A . n A 1 30 VAL 30 17 17 VAL VAL A . n A 1 31 GLU 31 18 18 GLU GLU A . n A 1 32 LEU 32 19 19 LEU LEU A . n A 1 33 ASP 33 20 20 ASP ASP A . n A 1 34 GLY 34 21 21 GLY GLY A . n A 1 35 ASP 35 22 22 ASP ASP A . n A 1 36 VAL 36 23 23 VAL VAL A . n A 1 37 ASN 37 24 24 ASN ASN A . n A 1 38 GLY 38 25 25 GLY GLY A . n A 1 39 HIS 39 26 26 HIS HIS A . n A 1 40 LYS 40 27 27 LYS LYS A . n A 1 41 PHE 41 28 28 PHE PHE A . n A 1 42 SER 42 29 29 SER SER A . n A 1 43 VAL 43 30 30 VAL VAL A . n A 1 44 SER 44 31 31 SER SER A . n A 1 45 GLY 45 32 32 GLY GLY A . n A 1 46 GLU 46 33 33 GLU GLU A . n A 1 47 GLY 47 34 34 GLY GLY A . n A 1 48 GLU 48 35 35 GLU GLU A . n A 1 49 GLY 49 36 36 GLY GLY A . n A 1 50 ASP 50 37 37 ASP ASP A . n A 1 51 ALA 51 38 38 ALA ALA A . n A 1 52 THR 52 39 39 THR THR A . n A 1 53 TYR 53 40 40 TYR TYR A . n A 1 54 GLY 54 41 41 GLY GLY A . n A 1 55 LYS 55 42 42 LYS LYS A . n A 1 56 LEU 56 43 43 LEU LEU A . n A 1 57 THR 57 44 44 THR THR A . n A 1 58 LEU 58 45 45 LEU LEU A . n A 1 59 LYS 59 46 46 LYS LYS A . n A 1 60 PHE 60 47 47 PHE PHE A . n A 1 61 ILE 61 48 48 ILE ILE A . n A 1 62 CYS 62 49 49 CYS CYS A . n A 1 63 THR 63 50 50 THR THR A . n A 1 64 THR 64 51 51 THR THR A . n A 1 65 GLY 65 52 52 GLY GLY A . n A 1 66 LYS 66 53 53 LYS LYS A . n A 1 67 LEU 67 54 54 LEU LEU A . n A 1 68 PRO 68 55 55 PRO PRO A . n A 1 69 VAL 69 56 56 VAL VAL A . n A 1 70 PRO 70 57 57 PRO PRO A . n A 1 71 TRP 71 58 58 TRP TRP A . n A 1 72 PRO 72 59 59 PRO PRO A . n A 1 73 THR 73 60 60 THR THR A . n A 1 74 LEU 74 61 61 LEU LEU A . n A 1 75 VAL 75 62 62 VAL VAL A . n A 1 76 THR 76 63 63 THR THR A . n A 1 77 THR 77 64 64 THR THR A . n A 1 78 LEU 78 65 65 LEU LEU A . n A 1 79 GYS 79 66 66 GYS CRO A . n A 1 80 VAL 80 68 68 VAL VAL A . n A 1 81 GLN 81 69 69 GLN GLN A . n A 1 82 CYS 82 70 70 CYS CYS A . n A 1 83 PHE 83 71 71 PHE PHE A . n A 1 84 SER 84 72 72 SER SER A . n A 1 85 ARG 85 73 73 ARG ARG A . n A 1 86 TYR 86 74 74 TYR TYR A . n A 1 87 PRO 87 75 75 PRO PRO A . n A 1 88 ASP 88 76 76 ASP ASP A . n A 1 89 HIS 89 77 77 HIS HIS A . n A 1 90 MET 90 78 78 MET MET A . n A 1 91 LYS 91 79 79 LYS LYS A . n A 1 92 GLN 92 80 80 GLN GLN A . n A 1 93 HIS 93 81 81 HIS HIS A . n A 1 94 ASP 94 82 82 ASP ASP A . n A 1 95 PHE 95 83 83 PHE PHE A . n A 1 96 PHE 96 84 84 PHE PHE A . n A 1 97 LYS 97 85 85 LYS LYS A . n A 1 98 SER 98 86 86 SER SER A . n A 1 99 ALA 99 87 87 ALA ALA A . n A 1 100 MET 100 88 88 MET MET A . n A 1 101 PRO 101 89 89 PRO PRO A . n A 1 102 GLU 102 90 90 GLU GLU A . n A 1 103 GLY 103 91 91 GLY GLY A . n A 1 104 TYR 104 92 92 TYR TYR A . n A 1 105 VAL 105 93 93 VAL VAL A . n A 1 106 GLN 106 94 94 GLN GLN A . n A 1 107 GLU 107 95 95 GLU GLU A . n A 1 108 ARG 108 96 96 ARG ARG A . n A 1 109 THR 109 97 97 THR THR A . n A 1 110 ILE 110 98 98 ILE ILE A . n A 1 111 PHE 111 99 99 PHE PHE A . n A 1 112 PHE 112 100 100 PHE PHE A . n A 1 113 LYS 113 101 101 LYS LYS A . n A 1 114 ASP 114 102 102 ASP ASP A . n A 1 115 ASP 115 103 103 ASP ASP A . n A 1 116 GLY 116 104 104 GLY GLY A . n A 1 117 ASN 117 105 105 ASN ASN A . n A 1 118 TYR 118 106 106 TYR TYR A . n A 1 119 LYS 119 107 107 LYS LYS A . n A 1 120 THR 120 108 108 THR THR A . n A 1 121 ARG 121 109 109 ARG ARG A . n A 1 122 ALA 122 110 110 ALA ALA A . n A 1 123 GLU 123 111 111 GLU GLU A . n A 1 124 VAL 124 112 112 VAL VAL A . n A 1 125 LYS 125 113 113 LYS LYS A . n A 1 126 PHE 126 114 114 PHE PHE A . n A 1 127 GLU 127 115 115 GLU GLU A . n A 1 128 GLY 128 116 116 GLY GLY A . n A 1 129 ASP 129 117 117 ASP ASP A . n A 1 130 THR 130 118 118 THR THR A . n A 1 131 LEU 131 119 119 LEU LEU A . n A 1 132 VAL 132 120 120 VAL VAL A . n A 1 133 ASN 133 121 121 ASN ASN A . n A 1 134 ARG 134 122 122 ARG ARG A . n A 1 135 ILE 135 123 123 ILE ILE A . n A 1 136 GLU 136 124 124 GLU GLU A . n A 1 137 LEU 137 125 125 LEU LEU A . n A 1 138 LYS 138 126 126 LYS LYS A . n A 1 139 GLY 139 127 127 GLY GLY A . n A 1 140 ILE 140 128 128 ILE ILE A . n A 1 141 ASP 141 129 129 ASP ASP A . n A 1 142 PHE 142 130 130 PHE PHE A . n A 1 143 LYS 143 131 131 LYS LYS A . n A 1 144 GLU 144 132 132 GLU GLU A . n A 1 145 ASP 145 133 133 ASP ASP A . n A 1 146 GLY 146 134 134 GLY GLY A . n A 1 147 ASN 147 135 135 ASN ASN A . n A 1 148 ILE 148 136 136 ILE ILE A . n A 1 149 LEU 149 137 137 LEU LEU A . n A 1 150 GLY 150 138 138 GLY GLY A . n A 1 151 HIS 151 139 139 HIS HIS A . n A 1 152 LYS 152 140 140 LYS LYS A . n A 1 153 LEU 153 141 141 LEU LEU A . n A 1 154 GLU 154 142 142 GLU GLU A . n A 1 155 TYR 155 143 143 TYR TYR A . n A 1 156 ASN 156 144 144 ASN ASN A . n A 1 157 TYR 157 145 145 TYR TYR A . n A 1 158 ASN 158 146 146 ASN ASN A . n A 1 159 SER 159 147 147 SER SER A . n A 1 160 HIS 160 148 148 HIS HIS A . n A 1 161 ASN 161 149 149 ASN ASN A . n A 1 162 VAL 162 150 150 VAL VAL A . n A 1 163 TYR 163 151 151 TYR TYR A . n A 1 164 ILE 164 152 152 ILE ILE A . n A 1 165 MET 165 153 153 MET MET A . n A 1 166 ALA 166 154 154 ALA ALA A . n A 1 167 ASP 167 155 155 ASP ASP A . n A 1 168 LYS 168 156 156 LYS LYS A . n A 1 169 GLN 169 157 157 GLN GLN A . n A 1 170 LYS 170 158 158 LYS LYS A . n A 1 171 ASN 171 159 159 ASN ASN A . n A 1 172 GLY 172 160 160 GLY GLY A . n A 1 173 ILE 173 161 161 ILE ILE A . n A 1 174 LYS 174 162 162 LYS LYS A . n A 1 175 VAL 175 163 163 VAL VAL A . n A 1 176 ASN 176 164 164 ASN ASN A . n A 1 177 PHE 177 165 165 PHE PHE A . n A 1 178 LYS 178 166 166 LYS LYS A . n A 1 179 ILE 179 167 167 ILE ILE A . n A 1 180 ARG 180 168 168 ARG ARG A . n A 1 181 HIS 181 169 169 HIS HIS A . n A 1 182 ASN 182 170 170 ASN ASN A . n A 1 183 ILE 183 171 171 ILE ILE A . n A 1 184 GLU 184 172 172 GLU GLU A . n A 1 185 ASP 185 173 173 ASP ASP A . n A 1 186 GLY 186 174 174 GLY GLY A . n A 1 187 SER 187 175 175 SER SER A . n A 1 188 VAL 188 176 176 VAL VAL A . n A 1 189 GLN 189 177 177 GLN GLN A . n A 1 190 LEU 190 178 178 LEU LEU A . n A 1 191 ALA 191 179 179 ALA ALA A . n A 1 192 ASP 192 180 180 ASP ASP A . n A 1 193 HIS 193 181 181 HIS HIS A . n A 1 194 TYR 194 182 182 TYR TYR A . n A 1 195 GLN 195 183 183 GLN GLN A . n A 1 196 GLN 196 184 184 GLN GLN A . n A 1 197 ASN 197 185 185 ASN ASN A . n A 1 198 THR 198 186 186 THR THR A . n A 1 199 PRO 199 187 187 PRO PRO A . n A 1 200 ILE 200 188 188 ILE ILE A . n A 1 201 GLY 201 189 189 GLY GLY A . n A 1 202 ASP 202 190 190 ASP ASP A . n A 1 203 GLY 203 191 191 GLY GLY A . n A 1 204 PRO 204 192 192 PRO PRO A . n A 1 205 VAL 205 193 193 VAL VAL A . n A 1 206 LEU 206 194 194 LEU LEU A . n A 1 207 LEU 207 195 195 LEU LEU A . n A 1 208 PRO 208 196 196 PRO PRO A . n A 1 209 ASP 209 197 197 ASP ASP A . n A 1 210 ASN 210 198 198 ASN ASN A . n A 1 211 HIS 211 199 199 HIS HIS A . n A 1 212 TYR 212 200 200 TYR TYR A . n A 1 213 LEU 213 201 201 LEU LEU A . n A 1 214 SER 214 202 202 SER SER A . n A 1 215 THR 215 203 203 THR THR A . n A 1 216 GLN 216 204 204 GLN GLN A . n A 1 217 SER 217 205 205 SER SER A . n A 1 218 ALA 218 206 206 ALA ALA A . n A 1 219 LEU 219 207 207 LEU LEU A . n A 1 220 SER 220 208 208 SER SER A . n A 1 221 LYS 221 209 209 LYS LYS A . n A 1 222 ASP 222 210 210 ASP ASP A . n A 1 223 PRO 223 211 211 PRO PRO A . n A 1 224 ASN 224 212 212 ASN ASN A . n A 1 225 GLU 225 213 213 GLU GLU A . n A 1 226 LYS 226 214 214 LYS LYS A . n A 1 227 ARG 227 215 215 ARG ARG A . n A 1 228 ASP 228 216 216 ASP ASP A . n A 1 229 HIS 229 217 217 HIS HIS A . n A 1 230 MET 230 218 218 MET MET A . n A 1 231 VAL 231 219 219 VAL VAL A . n A 1 232 LEU 232 220 220 LEU LEU A . n A 1 233 LEU 233 221 221 LEU LEU A . n A 1 234 GLU 234 222 222 GLU GLU A . n A 1 235 PHE 235 223 223 PHE PHE A . n A 1 236 VAL 236 224 224 VAL VAL A . n A 1 237 THR 237 225 225 THR THR A . n A 1 238 ALA 238 226 226 ALA ALA A . n A 1 239 ALA 239 227 227 ALA ALA A . n A 1 240 GLY 240 228 228 GLY GLY A . n A 1 241 ILE 241 229 229 ILE ILE A . n A 1 242 THR 242 230 230 THR THR A . n A 1 243 LEU 243 231 ? ? ? A . n A 1 244 GLY 244 232 ? ? ? A . n A 1 245 MET 245 233 ? ? ? A . n A 1 246 ASP 246 234 ? ? ? A . n A 1 247 GLU 247 235 ? ? ? A . n A 1 248 LEU 248 236 ? ? ? A . n A 1 249 TYR 249 237 ? ? ? A . n A 1 250 LYS 250 238 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 1 301 1 PO4 PO4 A . C 3 HOH 1 401 107 HOH HOH A . C 3 HOH 2 402 154 HOH HOH A . C 3 HOH 3 403 135 HOH HOH A . C 3 HOH 4 404 106 HOH HOH A . C 3 HOH 5 405 138 HOH HOH A . C 3 HOH 6 406 126 HOH HOH A . C 3 HOH 7 407 108 HOH HOH A . C 3 HOH 8 408 121 HOH HOH A . C 3 HOH 9 409 158 HOH HOH A . C 3 HOH 10 410 160 HOH HOH A . C 3 HOH 11 411 118 HOH HOH A . C 3 HOH 12 412 110 HOH HOH A . C 3 HOH 13 413 159 HOH HOH A . C 3 HOH 14 414 58 HOH HOH A . C 3 HOH 15 415 22 HOH HOH A . C 3 HOH 16 416 27 HOH HOH A . C 3 HOH 17 417 95 HOH HOH A . C 3 HOH 18 418 72 HOH HOH A . C 3 HOH 19 419 131 HOH HOH A . C 3 HOH 20 420 129 HOH HOH A . C 3 HOH 21 421 111 HOH HOH A . C 3 HOH 22 422 144 HOH HOH A . C 3 HOH 23 423 46 HOH HOH A . C 3 HOH 24 424 140 HOH HOH A . C 3 HOH 25 425 128 HOH HOH A . C 3 HOH 26 426 69 HOH HOH A . C 3 HOH 27 427 19 HOH HOH A . C 3 HOH 28 428 5 HOH HOH A . C 3 HOH 29 429 52 HOH HOH A . C 3 HOH 30 430 90 HOH HOH A . C 3 HOH 31 431 81 HOH HOH A . C 3 HOH 32 432 155 HOH HOH A . C 3 HOH 33 433 156 HOH HOH A . C 3 HOH 34 434 153 HOH HOH A . C 3 HOH 35 435 136 HOH HOH A . C 3 HOH 36 436 105 HOH HOH A . C 3 HOH 37 437 109 HOH HOH A . C 3 HOH 38 438 77 HOH HOH A . C 3 HOH 39 439 114 HOH HOH A . C 3 HOH 40 440 31 HOH HOH A . C 3 HOH 41 441 17 HOH HOH A . C 3 HOH 42 442 32 HOH HOH A . C 3 HOH 43 443 20 HOH HOH A . C 3 HOH 44 444 82 HOH HOH A . C 3 HOH 45 445 4 HOH HOH A . C 3 HOH 46 446 150 HOH HOH A . C 3 HOH 47 447 88 HOH HOH A . C 3 HOH 48 448 6 HOH HOH A . C 3 HOH 49 449 24 HOH HOH A . C 3 HOH 50 450 15 HOH HOH A . C 3 HOH 51 451 61 HOH HOH A . C 3 HOH 52 452 76 HOH HOH A . C 3 HOH 53 453 87 HOH HOH A . C 3 HOH 54 454 60 HOH HOH A . C 3 HOH 55 455 63 HOH HOH A . C 3 HOH 56 456 94 HOH HOH A . C 3 HOH 57 457 71 HOH HOH A . C 3 HOH 58 458 11 HOH HOH A . C 3 HOH 59 459 48 HOH HOH A . C 3 HOH 60 460 152 HOH HOH A . C 3 HOH 61 461 33 HOH HOH A . C 3 HOH 62 462 50 HOH HOH A . C 3 HOH 63 463 119 HOH HOH A . C 3 HOH 64 464 13 HOH HOH A . C 3 HOH 65 465 70 HOH HOH A . C 3 HOH 66 466 54 HOH HOH A . C 3 HOH 67 467 3 HOH HOH A . C 3 HOH 68 468 120 HOH HOH A . C 3 HOH 69 469 25 HOH HOH A . C 3 HOH 70 470 29 HOH HOH A . C 3 HOH 71 471 14 HOH HOH A . C 3 HOH 72 472 40 HOH HOH A . C 3 HOH 73 473 45 HOH HOH A . C 3 HOH 74 474 93 HOH HOH A . C 3 HOH 75 475 34 HOH HOH A . C 3 HOH 76 476 115 HOH HOH A . C 3 HOH 77 477 2 HOH HOH A . C 3 HOH 78 478 18 HOH HOH A . C 3 HOH 79 479 39 HOH HOH A . C 3 HOH 80 480 62 HOH HOH A . C 3 HOH 81 481 10 HOH HOH A . C 3 HOH 82 482 83 HOH HOH A . C 3 HOH 83 483 146 HOH HOH A . C 3 HOH 84 484 12 HOH HOH A . C 3 HOH 85 485 23 HOH HOH A . C 3 HOH 86 486 57 HOH HOH A . C 3 HOH 87 487 41 HOH HOH A . C 3 HOH 88 488 117 HOH HOH A . C 3 HOH 89 489 73 HOH HOH A . C 3 HOH 90 490 47 HOH HOH A . C 3 HOH 91 491 30 HOH HOH A . C 3 HOH 92 492 43 HOH HOH A . C 3 HOH 93 493 16 HOH HOH A . C 3 HOH 94 494 134 HOH HOH A . C 3 HOH 95 495 7 HOH HOH A . C 3 HOH 96 496 143 HOH HOH A . C 3 HOH 97 497 56 HOH HOH A . C 3 HOH 98 498 35 HOH HOH A . C 3 HOH 99 499 132 HOH HOH A . C 3 HOH 100 500 66 HOH HOH A . C 3 HOH 101 501 28 HOH HOH A . C 3 HOH 102 502 26 HOH HOH A . C 3 HOH 103 503 65 HOH HOH A . C 3 HOH 104 504 157 HOH HOH A . C 3 HOH 105 505 67 HOH HOH A . C 3 HOH 106 506 127 HOH HOH A . C 3 HOH 107 507 116 HOH HOH A . C 3 HOH 108 508 148 HOH HOH A . C 3 HOH 109 509 59 HOH HOH A . C 3 HOH 110 510 8 HOH HOH A . C 3 HOH 111 511 113 HOH HOH A . C 3 HOH 112 512 44 HOH HOH A . C 3 HOH 113 513 74 HOH HOH A . C 3 HOH 114 514 21 HOH HOH A . C 3 HOH 115 515 85 HOH HOH A . C 3 HOH 116 516 51 HOH HOH A . C 3 HOH 117 517 102 HOH HOH A . C 3 HOH 118 518 68 HOH HOH A . C 3 HOH 119 519 38 HOH HOH A . C 3 HOH 120 520 133 HOH HOH A . C 3 HOH 121 521 64 HOH HOH A . C 3 HOH 122 522 55 HOH HOH A . C 3 HOH 123 523 151 HOH HOH A . C 3 HOH 124 524 124 HOH HOH A . C 3 HOH 125 525 89 HOH HOH A . C 3 HOH 126 526 75 HOH HOH A . C 3 HOH 127 527 37 HOH HOH A . C 3 HOH 128 528 130 HOH HOH A . C 3 HOH 129 529 36 HOH HOH A . C 3 HOH 130 530 142 HOH HOH A . C 3 HOH 131 531 84 HOH HOH A . C 3 HOH 132 532 1 HOH HOH A . C 3 HOH 133 533 139 HOH HOH A . C 3 HOH 134 534 97 HOH HOH A . C 3 HOH 135 535 98 HOH HOH A . C 3 HOH 136 536 53 HOH HOH A . C 3 HOH 137 537 79 HOH HOH A . C 3 HOH 138 538 112 HOH HOH A . C 3 HOH 139 539 147 HOH HOH A . C 3 HOH 140 540 104 HOH HOH A . C 3 HOH 141 541 137 HOH HOH A . C 3 HOH 142 542 122 HOH HOH A . C 3 HOH 143 543 123 HOH HOH A . C 3 HOH 144 544 42 HOH HOH A . C 3 HOH 145 545 145 HOH HOH A . C 3 HOH 146 546 141 HOH HOH A . C 3 HOH 147 547 161 HOH HOH A . C 3 HOH 148 548 101 HOH HOH A . C 3 HOH 149 549 149 HOH HOH A . C 3 HOH 150 550 99 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER 3 ? OG ? A SER 16 OG 2 1 Y 1 A LYS 4 ? CG ? A LYS 17 CG 3 1 Y 1 A LYS 4 ? CD ? A LYS 17 CD 4 1 Y 1 A LYS 4 ? CE ? A LYS 17 CE 5 1 Y 1 A LYS 4 ? NZ ? A LYS 17 NZ 6 1 Y 1 A GLU 7 ? CG ? A GLU 20 CG 7 1 Y 1 A GLU 7 ? CD ? A GLU 20 CD 8 1 Y 1 A GLU 7 ? OE1 ? A GLU 20 OE1 9 1 Y 1 A GLU 7 ? OE2 ? A GLU 20 OE2 10 1 Y 1 A LYS 53 ? CD ? A LYS 66 CD 11 1 Y 1 A LYS 53 ? CE ? A LYS 66 CE 12 1 Y 1 A LYS 53 ? NZ ? A LYS 66 NZ 13 1 Y 1 A ASP 133 ? CG ? A ASP 145 CG 14 1 Y 1 A ASP 133 ? OD1 ? A ASP 145 OD1 15 1 Y 1 A ASP 133 ? OD2 ? A ASP 145 OD2 16 1 Y 1 A LYS 162 ? CE ? A LYS 174 CE 17 1 Y 1 A LYS 162 ? NZ ? A LYS 174 NZ # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0103 1 ? 'data reduction' ? ? 'Wolfgang Kabsch' Wolfgang.Kabsch@mpimf-heidelberg.mpg.de ? ? ? ? ? http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/ ? XDS ? ? package . 2 ? 'data scaling' ? ? 'Wolfgang Kabsch' ? ? ? ? ? ? http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? XSCALE ? ? package . 3 ? phasing ? ? 'Alexei Vaguine' alexei@ysbl.york.ac.uk ? ? ? ? Fortran_77 http://www.ccp4.ac.uk/dist/html/molrep.html ? MOLREP ? ? program . 4 ? 'data extraction' ? ? PDB deposit@deposit.rcsb.org 'Apr. 1, 2019' ? ? ? C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ ? PDB_EXTRACT ? ? package 3.25 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6YLP _cell.details ? _cell.formula_units_Z ? _cell.length_a 50.970 _cell.length_a_esd ? _cell.length_b 62.150 _cell.length_b_esd ? _cell.length_c 68.790 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6YLP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6YLP _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.12 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 41.91 _exptl_crystal.description ;A - long axis of crystal B, C - diagonal to the crystal faces ; _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 3.8 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'PEG 8000, potassium dihydrogen phosphate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 300K' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-08-13 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5419 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.5419 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate 26.127 _reflns.entry_id 6YLP _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.550 _reflns.d_resolution_low 46.120 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 61255 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.900 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.771 _reflns.pdbx_Rmerge_I_obs 0.055 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.940 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.041 _reflns.pdbx_scaling_rejects 272 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.060 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 353489 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 1.550 1.590 ? 1.030 ? 11353 4563 ? 4560 99.900 ? ? ? ? 0.894 ? ? ? ? ? ? ? ? 2.490 ? ? ? ? 1.157 ? ? 1 1 0.373 ? ? 1.590 1.630 ? 1.340 ? 11580 4403 ? 4403 100.000 ? ? ? ? 0.721 ? ? ? ? ? ? ? ? 2.630 ? ? ? ? 0.920 ? ? 2 1 0.490 ? ? 1.630 1.680 ? 1.760 ? 12838 4346 ? 4346 100.000 ? ? ? ? 0.588 ? ? ? ? ? ? ? ? 2.954 ? ? ? ? 0.725 ? ? 3 1 0.628 ? ? 1.680 1.730 ? 2.420 ? 15174 4142 ? 4139 99.900 ? ? ? ? 0.488 ? ? ? ? ? ? ? ? 3.666 ? ? ? ? 0.574 ? ? 4 1 0.758 ? ? 1.730 1.790 ? 3.060 ? 17315 4036 ? 4036 100.000 ? ? ? ? 0.426 ? ? ? ? ? ? ? ? 4.290 ? ? ? ? 0.487 ? ? 5 1 0.835 ? ? 1.790 1.850 ? 4.370 ? 18013 3915 ? 3915 100.000 ? ? ? ? 0.304 ? ? ? ? ? ? ? ? 4.601 ? ? ? ? 0.344 ? ? 6 1 0.925 ? ? 1.850 1.920 ? 6.240 ? 18161 3793 ? 3780 99.700 ? ? ? ? 0.234 ? ? ? ? ? ? ? ? 4.804 ? ? ? ? 0.263 ? ? 7 1 0.958 ? ? 1.920 2.000 ? 10.020 ? 21758 3617 ? 3609 99.800 ? ? ? ? 0.161 ? ? ? ? ? ? ? ? 6.029 ? ? ? ? 0.177 ? ? 8 1 0.986 ? ? 2.000 2.090 ? 13.960 ? 24046 3496 ? 3493 99.900 ? ? ? ? 0.129 ? ? ? ? ? ? ? ? 6.884 ? ? ? ? 0.140 ? ? 9 1 0.993 ? ? 2.090 2.190 ? 17.780 ? 27412 3321 ? 3321 100.000 ? ? ? ? 0.108 ? ? ? ? ? ? ? ? 8.254 ? ? ? ? 0.115 ? ? 10 1 0.996 ? ? 2.190 2.310 ? 20.060 ? 25424 3172 ? 3170 99.900 ? ? ? ? 0.098 ? ? ? ? ? ? ? ? 8.020 ? ? ? ? 0.105 ? ? 11 1 0.996 ? ? 2.310 2.450 ? 23.400 ? 23853 2996 ? 2996 100.000 ? ? ? ? 0.079 ? ? ? ? ? ? ? ? 7.962 ? ? ? ? 0.084 ? ? 12 1 0.998 ? ? 2.450 2.620 ? 26.410 ? 20326 2789 ? 2789 100.000 ? ? ? ? 0.066 ? ? ? ? ? ? ? ? 7.288 ? ? ? ? 0.071 ? ? 13 1 0.998 ? ? 2.620 2.830 ? 31.060 ? 21526 2636 ? 2636 100.000 ? ? ? ? 0.062 ? ? ? ? ? ? ? ? 8.166 ? ? ? ? 0.066 ? ? 14 1 0.998 ? ? 2.830 3.100 ? 39.120 ? 21116 2395 ? 2395 100.000 ? ? ? ? 0.046 ? ? ? ? ? ? ? ? 8.817 ? ? ? ? 0.048 ? ? 15 1 0.999 ? ? 3.100 3.470 ? 49.940 ? 18456 2182 ? 2182 100.000 ? ? ? ? 0.037 ? ? ? ? ? ? ? ? 8.458 ? ? ? ? 0.039 ? ? 16 1 0.999 ? ? 3.470 4.000 ? 56.010 ? 15823 1929 ? 1929 100.000 ? ? ? ? 0.031 ? ? ? ? ? ? ? ? 8.203 ? ? ? ? 0.033 ? ? 17 1 0.999 ? ? 4.000 4.900 ? 62.880 ? 13823 1622 ? 1621 99.900 ? ? ? ? 0.027 ? ? ? ? ? ? ? ? 8.527 ? ? ? ? 0.029 ? ? 18 1 1.000 ? ? 4.900 6.930 ? 52.760 ? 9412 1255 ? 1255 100.000 ? ? ? ? 0.033 ? ? ? ? ? ? ? ? 7.500 ? ? ? ? 0.035 ? ? 19 1 0.999 ? ? 6.930 46.120 ? 65.520 ? 6080 685 ? 680 99.300 ? ? ? ? 0.029 ? ? ? ? ? ? ? ? 8.941 ? ? ? ? 0.031 ? ? 20 1 1.000 ? ? # _refine.aniso_B[1][1] 0.0300 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][2] -0.6000 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 0.5700 _refine.B_iso_max 101.510 _refine.B_iso_mean 23.2010 _refine.B_iso_min 13.650 _refine.correlation_coeff_Fo_to_Fc 0.9680 _refine.correlation_coeff_Fo_to_Fc_free 0.9540 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6YLP _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.5500 _refine.ls_d_res_low 46.1200 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 30780 _refine.ls_number_reflns_R_free 1620 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.9800 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1776 _refine.ls_R_factor_R_free 0.2066 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1761 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free 0.1897 _refine.ls_wR_factor_R_work 0.1627 _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 2Y0G _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.0820 _refine.pdbx_overall_ESU_R_Free 0.0830 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 1.7470 _refine.overall_SU_ML 0.0640 _refine.overall_SU_R_Cruickshank_DPI 0.0821 _refine.overall_SU_R_free 0.0829 _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set 0.8281 _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.5500 _refine_hist.d_res_low 46.1200 _refine_hist.number_atoms_solvent 152 _refine_hist.number_atoms_total 2418 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 164 _refine_hist.pdbx_B_iso_mean_ligand 21.25 _refine_hist.pdbx_B_iso_mean_solvent 30.22 _refine_hist.pdbx_number_atoms_protein 1798 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 468 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.012 0.019 1888 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 1746 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.720 1.966 2560 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.918 3.000 4031 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.927 5.000 234 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 33.164 25.054 93 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 12.151 15.000 316 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 12.150 15.000 7 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.090 0.200 276 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 0.021 2150 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 439 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.5500 _refine_ls_shell.d_res_low 1.5900 _refine_ls_shell.number_reflns_all 2368 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 118 _refine_ls_shell.number_reflns_R_work 2250 _refine_ls_shell.percent_reflns_obs 100.0000 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2660 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2610 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6YLP _struct.title 'EGFP_in_Acidic_env Directionality of Optical Properties of Fluorescent Proteins' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6YLP _struct_keywords.text 'fluorescent protein, eGFP' _struct_keywords.pdbx_keywords 'FLUORESCENT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6YLP _struct_ref.pdbx_db_accession 6YLP _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6YLP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 250 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6YLP _struct_ref_seq.db_align_beg -12 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 238 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -12 _struct_ref_seq.pdbx_auth_seq_align_end 238 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 120 ? 1 MORE -4 ? 1 'SSA (A^2)' 10200 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 16 ? LEU A 21 ? SER A 3 LEU A 8 1 ? 6 HELX_P HELX_P2 AA2 ALA A 51 ? TYR A 53 ? ALA A 38 TYR A 40 5 ? 3 HELX_P HELX_P3 AA3 PRO A 70 ? VAL A 75 ? PRO A 57 VAL A 62 5 ? 6 HELX_P HELX_P4 AA4 VAL A 80 ? SER A 84 ? VAL A 68 SER A 72 5 ? 5 HELX_P HELX_P5 AA5 PRO A 87 ? HIS A 93 ? PRO A 75 HIS A 81 5 ? 7 HELX_P HELX_P6 AA6 ASP A 94 ? ALA A 99 ? ASP A 82 ALA A 87 1 ? 6 HELX_P HELX_P7 AA7 LYS A 168 ? ASN A 171 ? LYS A 156 ASN A 159 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LEU 78 C ? ? ? 1_555 A GYS 79 N1 ? ? A LEU 65 A GYS 66 1_555 ? ? ? ? ? ? ? 1.347 ? ? covale2 covale both ? A GYS 79 C3 ? ? ? 1_555 A VAL 80 N ? ? A GYS 66 A VAL 68 1_555 ? ? ? ? ? ? ? 1.348 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id MET _struct_mon_prot_cis.label_seq_id 100 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id MET _struct_mon_prot_cis.auth_seq_id 88 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 101 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 89 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 5.82 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 12 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA1 8 9 ? anti-parallel AA1 9 10 ? anti-parallel AA1 10 11 ? anti-parallel AA1 11 12 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 26 ? VAL A 36 ? VAL A 13 VAL A 23 AA1 2 HIS A 39 ? ASP A 50 ? HIS A 26 ASP A 37 AA1 3 LYS A 55 ? CYS A 62 ? LYS A 42 CYS A 49 AA1 4 HIS A 229 ? ALA A 239 ? HIS A 217 ALA A 227 AA1 5 HIS A 211 ? SER A 220 ? HIS A 199 SER A 208 AA1 6 ASN A 161 ? ASP A 167 ? ASN A 149 ASP A 155 AA1 7 GLY A 172 ? ASN A 182 ? GLY A 160 ASN A 170 AA1 8 VAL A 188 ? PRO A 199 ? VAL A 176 PRO A 187 AA1 9 TYR A 104 ? PHE A 112 ? TYR A 92 PHE A 100 AA1 10 ASN A 117 ? GLU A 127 ? ASN A 105 GLU A 115 AA1 11 THR A 130 ? ILE A 140 ? THR A 118 ILE A 128 AA1 12 VAL A 26 ? VAL A 36 ? VAL A 13 VAL A 23 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLY A 34 ? N GLY A 21 O PHE A 41 ? O PHE A 28 AA1 2 3 N ASP A 50 ? N ASP A 37 O LYS A 55 ? O LYS A 42 AA1 3 4 N PHE A 60 ? N PHE A 47 O MET A 230 ? O MET A 218 AA1 4 5 O ALA A 239 ? O ALA A 227 N TYR A 212 ? N TYR A 200 AA1 5 6 O HIS A 211 ? O HIS A 199 N ILE A 164 ? N ILE A 152 AA1 6 7 N ASP A 167 ? N ASP A 155 O GLY A 172 ? O GLY A 160 AA1 7 8 N HIS A 181 ? N HIS A 169 O GLN A 189 ? O GLN A 177 AA1 8 9 O THR A 198 ? O THR A 186 N VAL A 105 ? N VAL A 93 AA1 9 10 N TYR A 104 ? N TYR A 92 O VAL A 124 ? O VAL A 112 AA1 10 11 N LYS A 125 ? N LYS A 113 O VAL A 132 ? O VAL A 120 AA1 11 12 O GLY A 139 ? O GLY A 127 N ASP A 35 ? N ASP A 22 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id PO4 _struct_site.pdbx_auth_seq_id 301 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'binding site for residue PO4 A 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 GLU A 31 ? GLU A 18 . ? 4_545 ? 2 AC1 4 SER A 44 ? SER A 31 . ? 4_545 ? 3 AC1 4 THR A 52 ? THR A 39 . ? 1_555 ? 4 AC1 4 HOH C . ? HOH A 426 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD1 A ASP 37 ? ? O A HOH 401 ? ? 1.71 2 1 OD2 A ASP 102 ? ? O A HOH 403 ? ? 2.11 3 1 O A HOH 404 ? ? O A HOH 530 ? ? 2.12 # _pdbx_phasing_MR.entry_id 6YLP _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body 0.342 _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 46.120 _pdbx_phasing_MR.d_res_low_rotation 3.500 _pdbx_phasing_MR.d_res_high_translation ? _pdbx_phasing_MR.d_res_low_translation ? _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # _pdbx_entry_details.entry_id 6YLP _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -12 ? A MET 1 2 1 Y 1 A ALA -11 ? A ALA 2 3 1 Y 1 A HIS -10 ? A HIS 3 4 1 Y 1 A HIS -9 ? A HIS 4 5 1 Y 1 A HIS -8 ? A HIS 5 6 1 Y 1 A HIS -7 ? A HIS 6 7 1 Y 1 A HIS -6 ? A HIS 7 8 1 Y 1 A HIS -5 ? A HIS 8 9 1 Y 1 A GLY -4 ? A GLY 9 10 1 Y 1 A HIS -3 ? A HIS 10 11 1 Y 1 A HIS -2 ? A HIS 11 12 1 Y 1 A HIS -1 ? A HIS 12 13 1 Y 1 A GLN 0 ? A GLN 13 14 1 Y 1 A LEU 1 ? A LEU 14 15 1 Y 1 A VAL 2 ? A VAL 15 16 1 Y 1 A LEU 231 ? A LEU 243 17 1 Y 1 A GLY 232 ? A GLY 244 18 1 Y 1 A MET 233 ? A MET 245 19 1 Y 1 A ASP 234 ? A ASP 246 20 1 Y 1 A GLU 235 ? A GLU 247 21 1 Y 1 A LEU 236 ? A LEU 248 22 1 Y 1 A TYR 237 ? A TYR 249 23 1 Y 1 A LYS 238 ? A LYS 250 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GYS N1 N N N 137 GYS OG1 O N N 138 GYS CB1 C N N 139 GYS CA1 C N R 140 GYS C1 C N N 141 GYS N2 N N N 142 GYS N3 N N N 143 GYS C2 C N N 144 GYS O2 O N N 145 GYS CA2 C N N 146 GYS CA3 C N N 147 GYS CB2 C N N 148 GYS CG2 C Y N 149 GYS CD1 C Y N 150 GYS CD2 C Y N 151 GYS CE1 C Y N 152 GYS CE2 C Y N 153 GYS CZ C Y N 154 GYS OH O N N 155 GYS C3 C N N 156 GYS O3 O N N 157 GYS OXT O N N 158 GYS H H N N 159 GYS H2 H N N 160 GYS HA1 H N N 161 GYS HB11 H N N 162 GYS HB12 H N N 163 GYS HG1 H N N 164 GYS HB2 H N N 165 GYS HD2 H N N 166 GYS HE2 H N N 167 GYS HOH H N N 168 GYS HE1 H N N 169 GYS HD1 H N N 170 GYS HA31 H N N 171 GYS HA32 H N N 172 GYS HXT H N N 173 HIS N N N N 174 HIS CA C N S 175 HIS C C N N 176 HIS O O N N 177 HIS CB C N N 178 HIS CG C Y N 179 HIS ND1 N Y N 180 HIS CD2 C Y N 181 HIS CE1 C Y N 182 HIS NE2 N Y N 183 HIS OXT O N N 184 HIS H H N N 185 HIS H2 H N N 186 HIS HA H N N 187 HIS HB2 H N N 188 HIS HB3 H N N 189 HIS HD1 H N N 190 HIS HD2 H N N 191 HIS HE1 H N N 192 HIS HE2 H N N 193 HIS HXT H N N 194 HOH O O N N 195 HOH H1 H N N 196 HOH H2 H N N 197 ILE N N N N 198 ILE CA C N S 199 ILE C C N N 200 ILE O O N N 201 ILE CB C N S 202 ILE CG1 C N N 203 ILE CG2 C N N 204 ILE CD1 C N N 205 ILE OXT O N N 206 ILE H H N N 207 ILE H2 H N N 208 ILE HA H N N 209 ILE HB H N N 210 ILE HG12 H N N 211 ILE HG13 H N N 212 ILE HG21 H N N 213 ILE HG22 H N N 214 ILE HG23 H N N 215 ILE HD11 H N N 216 ILE HD12 H N N 217 ILE HD13 H N N 218 ILE HXT H N N 219 LEU N N N N 220 LEU CA C N S 221 LEU C C N N 222 LEU O O N N 223 LEU CB C N N 224 LEU CG C N N 225 LEU CD1 C N N 226 LEU CD2 C N N 227 LEU OXT O N N 228 LEU H H N N 229 LEU H2 H N N 230 LEU HA H N N 231 LEU HB2 H N N 232 LEU HB3 H N N 233 LEU HG H N N 234 LEU HD11 H N N 235 LEU HD12 H N N 236 LEU HD13 H N N 237 LEU HD21 H N N 238 LEU HD22 H N N 239 LEU HD23 H N N 240 LEU HXT H N N 241 LYS N N N N 242 LYS CA C N S 243 LYS C C N N 244 LYS O O N N 245 LYS CB C N N 246 LYS CG C N N 247 LYS CD C N N 248 LYS CE C N N 249 LYS NZ N N N 250 LYS OXT O N N 251 LYS H H N N 252 LYS H2 H N N 253 LYS HA H N N 254 LYS HB2 H N N 255 LYS HB3 H N N 256 LYS HG2 H N N 257 LYS HG3 H N N 258 LYS HD2 H N N 259 LYS HD3 H N N 260 LYS HE2 H N N 261 LYS HE3 H N N 262 LYS HZ1 H N N 263 LYS HZ2 H N N 264 LYS HZ3 H N N 265 LYS HXT H N N 266 MET N N N N 267 MET CA C N S 268 MET C C N N 269 MET O O N N 270 MET CB C N N 271 MET CG C N N 272 MET SD S N N 273 MET CE C N N 274 MET OXT O N N 275 MET H H N N 276 MET H2 H N N 277 MET HA H N N 278 MET HB2 H N N 279 MET HB3 H N N 280 MET HG2 H N N 281 MET HG3 H N N 282 MET HE1 H N N 283 MET HE2 H N N 284 MET HE3 H N N 285 MET HXT H N N 286 PHE N N N N 287 PHE CA C N S 288 PHE C C N N 289 PHE O O N N 290 PHE CB C N N 291 PHE CG C Y N 292 PHE CD1 C Y N 293 PHE CD2 C Y N 294 PHE CE1 C Y N 295 PHE CE2 C Y N 296 PHE CZ C Y N 297 PHE OXT O N N 298 PHE H H N N 299 PHE H2 H N N 300 PHE HA H N N 301 PHE HB2 H N N 302 PHE HB3 H N N 303 PHE HD1 H N N 304 PHE HD2 H N N 305 PHE HE1 H N N 306 PHE HE2 H N N 307 PHE HZ H N N 308 PHE HXT H N N 309 PO4 P P N N 310 PO4 O1 O N N 311 PO4 O2 O N N 312 PO4 O3 O N N 313 PO4 O4 O N N 314 PRO N N N N 315 PRO CA C N S 316 PRO C C N N 317 PRO O O N N 318 PRO CB C N N 319 PRO CG C N N 320 PRO CD C N N 321 PRO OXT O N N 322 PRO H H N N 323 PRO HA H N N 324 PRO HB2 H N N 325 PRO HB3 H N N 326 PRO HG2 H N N 327 PRO HG3 H N N 328 PRO HD2 H N N 329 PRO HD3 H N N 330 PRO HXT H N N 331 SER N N N N 332 SER CA C N S 333 SER C C N N 334 SER O O N N 335 SER CB C N N 336 SER OG O N N 337 SER OXT O N N 338 SER H H N N 339 SER H2 H N N 340 SER HA H N N 341 SER HB2 H N N 342 SER HB3 H N N 343 SER HG H N N 344 SER HXT H N N 345 THR N N N N 346 THR CA C N S 347 THR C C N N 348 THR O O N N 349 THR CB C N R 350 THR OG1 O N N 351 THR CG2 C N N 352 THR OXT O N N 353 THR H H N N 354 THR H2 H N N 355 THR HA H N N 356 THR HB H N N 357 THR HG1 H N N 358 THR HG21 H N N 359 THR HG22 H N N 360 THR HG23 H N N 361 THR HXT H N N 362 TRP N N N N 363 TRP CA C N S 364 TRP C C N N 365 TRP O O N N 366 TRP CB C N N 367 TRP CG C Y N 368 TRP CD1 C Y N 369 TRP CD2 C Y N 370 TRP NE1 N Y N 371 TRP CE2 C Y N 372 TRP CE3 C Y N 373 TRP CZ2 C Y N 374 TRP CZ3 C Y N 375 TRP CH2 C Y N 376 TRP OXT O N N 377 TRP H H N N 378 TRP H2 H N N 379 TRP HA H N N 380 TRP HB2 H N N 381 TRP HB3 H N N 382 TRP HD1 H N N 383 TRP HE1 H N N 384 TRP HE3 H N N 385 TRP HZ2 H N N 386 TRP HZ3 H N N 387 TRP HH2 H N N 388 TRP HXT H N N 389 TYR N N N N 390 TYR CA C N S 391 TYR C C N N 392 TYR O O N N 393 TYR CB C N N 394 TYR CG C Y N 395 TYR CD1 C Y N 396 TYR CD2 C Y N 397 TYR CE1 C Y N 398 TYR CE2 C Y N 399 TYR CZ C Y N 400 TYR OH O N N 401 TYR OXT O N N 402 TYR H H N N 403 TYR H2 H N N 404 TYR HA H N N 405 TYR HB2 H N N 406 TYR HB3 H N N 407 TYR HD1 H N N 408 TYR HD2 H N N 409 TYR HE1 H N N 410 TYR HE2 H N N 411 TYR HH H N N 412 TYR HXT H N N 413 VAL N N N N 414 VAL CA C N S 415 VAL C C N N 416 VAL O O N N 417 VAL CB C N N 418 VAL CG1 C N N 419 VAL CG2 C N N 420 VAL OXT O N N 421 VAL H H N N 422 VAL H2 H N N 423 VAL HA H N N 424 VAL HB H N N 425 VAL HG11 H N N 426 VAL HG12 H N N 427 VAL HG13 H N N 428 VAL HG21 H N N 429 VAL HG22 H N N 430 VAL HG23 H N N 431 VAL HXT H N N 432 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GYS N1 CA1 sing N N 129 GYS N1 H sing N N 130 GYS N1 H2 sing N N 131 GYS OG1 CB1 sing N N 132 GYS OG1 HG1 sing N N 133 GYS CB1 CA1 sing N N 134 GYS CB1 HB11 sing N N 135 GYS CB1 HB12 sing N N 136 GYS CA1 C1 sing N N 137 GYS CA1 HA1 sing N N 138 GYS C1 N2 doub N N 139 GYS C1 N3 sing N N 140 GYS N2 CA2 sing N N 141 GYS N3 C2 sing N N 142 GYS N3 CA3 sing N N 143 GYS C2 CA2 sing N N 144 GYS C2 O2 doub N N 145 GYS CA2 CB2 doub N Z 146 GYS CA3 C3 sing N N 147 GYS CA3 HA31 sing N N 148 GYS CA3 HA32 sing N N 149 GYS CB2 CG2 sing N N 150 GYS CB2 HB2 sing N N 151 GYS CG2 CD2 doub Y N 152 GYS CG2 CD1 sing Y N 153 GYS CD1 CE1 doub Y N 154 GYS CD1 HD1 sing N N 155 GYS CD2 CE2 sing Y N 156 GYS CD2 HD2 sing N N 157 GYS CE1 CZ sing Y N 158 GYS CE1 HE1 sing N N 159 GYS CE2 CZ doub Y N 160 GYS CE2 HE2 sing N N 161 GYS CZ OH sing N N 162 GYS OH HOH sing N N 163 GYS C3 O3 doub N N 164 GYS C3 OXT sing N N 165 GYS OXT HXT sing N N 166 HIS N CA sing N N 167 HIS N H sing N N 168 HIS N H2 sing N N 169 HIS CA C sing N N 170 HIS CA CB sing N N 171 HIS CA HA sing N N 172 HIS C O doub N N 173 HIS C OXT sing N N 174 HIS CB CG sing N N 175 HIS CB HB2 sing N N 176 HIS CB HB3 sing N N 177 HIS CG ND1 sing Y N 178 HIS CG CD2 doub Y N 179 HIS ND1 CE1 doub Y N 180 HIS ND1 HD1 sing N N 181 HIS CD2 NE2 sing Y N 182 HIS CD2 HD2 sing N N 183 HIS CE1 NE2 sing Y N 184 HIS CE1 HE1 sing N N 185 HIS NE2 HE2 sing N N 186 HIS OXT HXT sing N N 187 HOH O H1 sing N N 188 HOH O H2 sing N N 189 ILE N CA sing N N 190 ILE N H sing N N 191 ILE N H2 sing N N 192 ILE CA C sing N N 193 ILE CA CB sing N N 194 ILE CA HA sing N N 195 ILE C O doub N N 196 ILE C OXT sing N N 197 ILE CB CG1 sing N N 198 ILE CB CG2 sing N N 199 ILE CB HB sing N N 200 ILE CG1 CD1 sing N N 201 ILE CG1 HG12 sing N N 202 ILE CG1 HG13 sing N N 203 ILE CG2 HG21 sing N N 204 ILE CG2 HG22 sing N N 205 ILE CG2 HG23 sing N N 206 ILE CD1 HD11 sing N N 207 ILE CD1 HD12 sing N N 208 ILE CD1 HD13 sing N N 209 ILE OXT HXT sing N N 210 LEU N CA sing N N 211 LEU N H sing N N 212 LEU N H2 sing N N 213 LEU CA C sing N N 214 LEU CA CB sing N N 215 LEU CA HA sing N N 216 LEU C O doub N N 217 LEU C OXT sing N N 218 LEU CB CG sing N N 219 LEU CB HB2 sing N N 220 LEU CB HB3 sing N N 221 LEU CG CD1 sing N N 222 LEU CG CD2 sing N N 223 LEU CG HG sing N N 224 LEU CD1 HD11 sing N N 225 LEU CD1 HD12 sing N N 226 LEU CD1 HD13 sing N N 227 LEU CD2 HD21 sing N N 228 LEU CD2 HD22 sing N N 229 LEU CD2 HD23 sing N N 230 LEU OXT HXT sing N N 231 LYS N CA sing N N 232 LYS N H sing N N 233 LYS N H2 sing N N 234 LYS CA C sing N N 235 LYS CA CB sing N N 236 LYS CA HA sing N N 237 LYS C O doub N N 238 LYS C OXT sing N N 239 LYS CB CG sing N N 240 LYS CB HB2 sing N N 241 LYS CB HB3 sing N N 242 LYS CG CD sing N N 243 LYS CG HG2 sing N N 244 LYS CG HG3 sing N N 245 LYS CD CE sing N N 246 LYS CD HD2 sing N N 247 LYS CD HD3 sing N N 248 LYS CE NZ sing N N 249 LYS CE HE2 sing N N 250 LYS CE HE3 sing N N 251 LYS NZ HZ1 sing N N 252 LYS NZ HZ2 sing N N 253 LYS NZ HZ3 sing N N 254 LYS OXT HXT sing N N 255 MET N CA sing N N 256 MET N H sing N N 257 MET N H2 sing N N 258 MET CA C sing N N 259 MET CA CB sing N N 260 MET CA HA sing N N 261 MET C O doub N N 262 MET C OXT sing N N 263 MET CB CG sing N N 264 MET CB HB2 sing N N 265 MET CB HB3 sing N N 266 MET CG SD sing N N 267 MET CG HG2 sing N N 268 MET CG HG3 sing N N 269 MET SD CE sing N N 270 MET CE HE1 sing N N 271 MET CE HE2 sing N N 272 MET CE HE3 sing N N 273 MET OXT HXT sing N N 274 PHE N CA sing N N 275 PHE N H sing N N 276 PHE N H2 sing N N 277 PHE CA C sing N N 278 PHE CA CB sing N N 279 PHE CA HA sing N N 280 PHE C O doub N N 281 PHE C OXT sing N N 282 PHE CB CG sing N N 283 PHE CB HB2 sing N N 284 PHE CB HB3 sing N N 285 PHE CG CD1 doub Y N 286 PHE CG CD2 sing Y N 287 PHE CD1 CE1 sing Y N 288 PHE CD1 HD1 sing N N 289 PHE CD2 CE2 doub Y N 290 PHE CD2 HD2 sing N N 291 PHE CE1 CZ doub Y N 292 PHE CE1 HE1 sing N N 293 PHE CE2 CZ sing Y N 294 PHE CE2 HE2 sing N N 295 PHE CZ HZ sing N N 296 PHE OXT HXT sing N N 297 PO4 P O1 doub N N 298 PO4 P O2 sing N N 299 PO4 P O3 sing N N 300 PO4 P O4 sing N N 301 PRO N CA sing N N 302 PRO N CD sing N N 303 PRO N H sing N N 304 PRO CA C sing N N 305 PRO CA CB sing N N 306 PRO CA HA sing N N 307 PRO C O doub N N 308 PRO C OXT sing N N 309 PRO CB CG sing N N 310 PRO CB HB2 sing N N 311 PRO CB HB3 sing N N 312 PRO CG CD sing N N 313 PRO CG HG2 sing N N 314 PRO CG HG3 sing N N 315 PRO CD HD2 sing N N 316 PRO CD HD3 sing N N 317 PRO OXT HXT sing N N 318 SER N CA sing N N 319 SER N H sing N N 320 SER N H2 sing N N 321 SER CA C sing N N 322 SER CA CB sing N N 323 SER CA HA sing N N 324 SER C O doub N N 325 SER C OXT sing N N 326 SER CB OG sing N N 327 SER CB HB2 sing N N 328 SER CB HB3 sing N N 329 SER OG HG sing N N 330 SER OXT HXT sing N N 331 THR N CA sing N N 332 THR N H sing N N 333 THR N H2 sing N N 334 THR CA C sing N N 335 THR CA CB sing N N 336 THR CA HA sing N N 337 THR C O doub N N 338 THR C OXT sing N N 339 THR CB OG1 sing N N 340 THR CB CG2 sing N N 341 THR CB HB sing N N 342 THR OG1 HG1 sing N N 343 THR CG2 HG21 sing N N 344 THR CG2 HG22 sing N N 345 THR CG2 HG23 sing N N 346 THR OXT HXT sing N N 347 TRP N CA sing N N 348 TRP N H sing N N 349 TRP N H2 sing N N 350 TRP CA C sing N N 351 TRP CA CB sing N N 352 TRP CA HA sing N N 353 TRP C O doub N N 354 TRP C OXT sing N N 355 TRP CB CG sing N N 356 TRP CB HB2 sing N N 357 TRP CB HB3 sing N N 358 TRP CG CD1 doub Y N 359 TRP CG CD2 sing Y N 360 TRP CD1 NE1 sing Y N 361 TRP CD1 HD1 sing N N 362 TRP CD2 CE2 doub Y N 363 TRP CD2 CE3 sing Y N 364 TRP NE1 CE2 sing Y N 365 TRP NE1 HE1 sing N N 366 TRP CE2 CZ2 sing Y N 367 TRP CE3 CZ3 doub Y N 368 TRP CE3 HE3 sing N N 369 TRP CZ2 CH2 doub Y N 370 TRP CZ2 HZ2 sing N N 371 TRP CZ3 CH2 sing Y N 372 TRP CZ3 HZ3 sing N N 373 TRP CH2 HH2 sing N N 374 TRP OXT HXT sing N N 375 TYR N CA sing N N 376 TYR N H sing N N 377 TYR N H2 sing N N 378 TYR CA C sing N N 379 TYR CA CB sing N N 380 TYR CA HA sing N N 381 TYR C O doub N N 382 TYR C OXT sing N N 383 TYR CB CG sing N N 384 TYR CB HB2 sing N N 385 TYR CB HB3 sing N N 386 TYR CG CD1 doub Y N 387 TYR CG CD2 sing Y N 388 TYR CD1 CE1 sing Y N 389 TYR CD1 HD1 sing N N 390 TYR CD2 CE2 doub Y N 391 TYR CD2 HD2 sing N N 392 TYR CE1 CZ doub Y N 393 TYR CE1 HE1 sing N N 394 TYR CE2 CZ sing Y N 395 TYR CE2 HE2 sing N N 396 TYR CZ OH sing N N 397 TYR OH HH sing N N 398 TYR OXT HXT sing N N 399 VAL N CA sing N N 400 VAL N H sing N N 401 VAL N H2 sing N N 402 VAL CA C sing N N 403 VAL CA CB sing N N 404 VAL CA HA sing N N 405 VAL C O doub N N 406 VAL C OXT sing N N 407 VAL CB CG1 sing N N 408 VAL CB CG2 sing N N 409 VAL CB HB sing N N 410 VAL CG1 HG11 sing N N 411 VAL CG1 HG12 sing N N 412 VAL CG1 HG13 sing N N 413 VAL CG2 HG21 sing N N 414 VAL CG2 HG22 sing N N 415 VAL CG2 HG23 sing N N 416 VAL OXT HXT sing N N 417 # _pdbx_audit_support.funding_organization 'Ministry of Education, Youth and Sports of the Czech Republic' _pdbx_audit_support.country 'Czech Republic' _pdbx_audit_support.grant_number CZ.02.1.01/0.0/0.0/16_019/0000729 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id GYS _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id GYS _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2Y0G _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 6YLP _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.019619 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016090 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014537 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_