data_6YPV # _entry.id 6YPV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6YPV pdb_00006ypv 10.2210/pdb6ypv/pdb WWPDB D_1292105374 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-09-09 2 'Structure model' 1 1 2020-09-30 3 'Structure model' 1 2 2024-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.pdbx_database_id_PubMed' 5 2 'Structure model' '_citation.title' 6 2 'Structure model' '_citation_author.identifier_ORCID' 7 2 'Structure model' '_citation_author.name' 8 3 'Structure model' '_database_2.pdbx_DOI' 9 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6YPV _pdbx_database_status.recvd_initial_deposition_date 2020-04-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 4JHT _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Rabe, P.' 1 0000-0002-3448-9559 'Beale, J.H.' 2 0000-0003-1171-2428 'Lang, P.A.' 3 0000-0003-3187-1469 'Dirr, A.S.' 4 0000-0002-3609-9642 'Leissing, T.M.' 5 ? 'Butryn, A.' 6 0000-0002-5227-4770 'Aller, P.' 7 0000-0002-1793-7030 'Kamps, J.J.A.G.' 8 0000-0001-8646-1796 'Axford, D.' 9 ? 'McDonough, M.A.' 10 0000-0003-4664-6942 'Orville, A.M.' 11 0000-0002-7803-1777 'Owen, R.' 12 0000-0002-2104-7057 'Schofield, C.J.' 13 0000-0002-0290-6565 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Iucrj _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2052-2525 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 7 _citation.language ? _citation.page_first 901 _citation.page_last 912 _citation.title 'Anaerobic fixed-target serial crystallography.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1107/S2052252520010374 _citation.pdbx_database_id_PubMed 32939282 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Rabe, P.' 1 ? primary 'Beale, J.H.' 2 ? primary 'Butryn, A.' 3 ? primary 'Aller, P.' 4 ? primary 'Dirr, A.' 5 ? primary 'Lang, P.A.' 6 ? primary 'Axford, D.N.' 7 ? primary 'Carr, S.B.' 8 ? primary 'Leissing, T.M.' 9 ? primary 'McDonough, M.A.' 10 ? primary 'Davy, B.' 11 ? primary 'Ebrahim, A.' 12 ? primary 'Orlans, J.' 13 ? primary 'Storm, S.L.S.' 14 ? primary 'Orville, A.M.' 15 ? primary 'Schofield, C.J.' 16 ? primary 'Owen, R.L.' 17 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Alpha-ketoglutarate-dependent dioxygenase AlkB' 24103.502 1 1.14.11.33 ? ? ? 2 non-polymer syn 'FE (III) ION' 55.845 1 ? ? ? ? 3 non-polymer syn '2-OXOGLUTARIC ACID' 146.098 1 ? ? ? ? 4 water nat water 18.015 72 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Alkylated DNA repair protein AlkB,DNA oxidative demethylase AlkB' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MLDLFADAEPWQEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSP IDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLK RNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTIDCRYNLTFRQAGKKE ; _entity_poly.pdbx_seq_one_letter_code_can ;MLDLFADAEPWQEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSP IDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLK RNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTIDCRYNLTFRQAGKKE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FE (III) ION' FE 3 '2-OXOGLUTARIC ACID' AKG 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LEU n 1 3 ASP n 1 4 LEU n 1 5 PHE n 1 6 ALA n 1 7 ASP n 1 8 ALA n 1 9 GLU n 1 10 PRO n 1 11 TRP n 1 12 GLN n 1 13 GLU n 1 14 PRO n 1 15 LEU n 1 16 ALA n 1 17 ALA n 1 18 GLY n 1 19 ALA n 1 20 VAL n 1 21 ILE n 1 22 LEU n 1 23 ARG n 1 24 ARG n 1 25 PHE n 1 26 ALA n 1 27 PHE n 1 28 ASN n 1 29 ALA n 1 30 ALA n 1 31 GLU n 1 32 GLN n 1 33 LEU n 1 34 ILE n 1 35 ARG n 1 36 ASP n 1 37 ILE n 1 38 ASN n 1 39 ASP n 1 40 VAL n 1 41 ALA n 1 42 SER n 1 43 GLN n 1 44 SER n 1 45 PRO n 1 46 PHE n 1 47 ARG n 1 48 GLN n 1 49 MET n 1 50 VAL n 1 51 THR n 1 52 PRO n 1 53 GLY n 1 54 GLY n 1 55 TYR n 1 56 THR n 1 57 MET n 1 58 SER n 1 59 VAL n 1 60 ALA n 1 61 MET n 1 62 THR n 1 63 ASN n 1 64 CYS n 1 65 GLY n 1 66 HIS n 1 67 LEU n 1 68 GLY n 1 69 TRP n 1 70 THR n 1 71 THR n 1 72 HIS n 1 73 ARG n 1 74 GLN n 1 75 GLY n 1 76 TYR n 1 77 LEU n 1 78 TYR n 1 79 SER n 1 80 PRO n 1 81 ILE n 1 82 ASP n 1 83 PRO n 1 84 GLN n 1 85 THR n 1 86 ASN n 1 87 LYS n 1 88 PRO n 1 89 TRP n 1 90 PRO n 1 91 ALA n 1 92 MET n 1 93 PRO n 1 94 GLN n 1 95 SER n 1 96 PHE n 1 97 HIS n 1 98 ASN n 1 99 LEU n 1 100 CYS n 1 101 GLN n 1 102 ARG n 1 103 ALA n 1 104 ALA n 1 105 THR n 1 106 ALA n 1 107 ALA n 1 108 GLY n 1 109 TYR n 1 110 PRO n 1 111 ASP n 1 112 PHE n 1 113 GLN n 1 114 PRO n 1 115 ASP n 1 116 ALA n 1 117 CYS n 1 118 LEU n 1 119 ILE n 1 120 ASN n 1 121 ARG n 1 122 TYR n 1 123 ALA n 1 124 PRO n 1 125 GLY n 1 126 ALA n 1 127 LYS n 1 128 LEU n 1 129 SER n 1 130 LEU n 1 131 HIS n 1 132 GLN n 1 133 ASP n 1 134 LYS n 1 135 ASP n 1 136 GLU n 1 137 PRO n 1 138 ASP n 1 139 LEU n 1 140 ARG n 1 141 ALA n 1 142 PRO n 1 143 ILE n 1 144 VAL n 1 145 SER n 1 146 VAL n 1 147 SER n 1 148 LEU n 1 149 GLY n 1 150 LEU n 1 151 PRO n 1 152 ALA n 1 153 ILE n 1 154 PHE n 1 155 GLN n 1 156 PHE n 1 157 GLY n 1 158 GLY n 1 159 LEU n 1 160 LYS n 1 161 ARG n 1 162 ASN n 1 163 ASP n 1 164 PRO n 1 165 LEU n 1 166 LYS n 1 167 ARG n 1 168 LEU n 1 169 LEU n 1 170 LEU n 1 171 GLU n 1 172 HIS n 1 173 GLY n 1 174 ASP n 1 175 VAL n 1 176 VAL n 1 177 VAL n 1 178 TRP n 1 179 GLY n 1 180 GLY n 1 181 GLU n 1 182 SER n 1 183 ARG n 1 184 LEU n 1 185 PHE n 1 186 TYR n 1 187 HIS n 1 188 GLY n 1 189 ILE n 1 190 GLN n 1 191 PRO n 1 192 LEU n 1 193 LYS n 1 194 ALA n 1 195 GLY n 1 196 PHE n 1 197 HIS n 1 198 PRO n 1 199 LEU n 1 200 THR n 1 201 ILE n 1 202 ASP n 1 203 CYS n 1 204 ARG n 1 205 TYR n 1 206 ASN n 1 207 LEU n 1 208 THR n 1 209 PHE n 1 210 ARG n 1 211 GLN n 1 212 ALA n 1 213 GLY n 1 214 LYS n 1 215 LYS n 1 216 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 216 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'alkB, aidD, b2212, JW2200' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli (strain K12)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET24a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight AKG non-polymer . '2-OXOGLUTARIC ACID' ? 'C5 H6 O5' 146.098 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FE non-polymer . 'FE (III) ION' ? 'Fe 3' 55.845 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 LEU 2 2 ? ? ? A . n A 1 3 ASP 3 3 ? ? ? A . n A 1 4 LEU 4 4 ? ? ? A . n A 1 5 PHE 5 5 ? ? ? A . n A 1 6 ALA 6 6 ? ? ? A . n A 1 7 ASP 7 7 ? ? ? A . n A 1 8 ALA 8 8 ? ? ? A . n A 1 9 GLU 9 9 ? ? ? A . n A 1 10 PRO 10 10 ? ? ? A . n A 1 11 TRP 11 11 ? ? ? A . n A 1 12 GLN 12 12 ? ? ? A . n A 1 13 GLU 13 13 ? ? ? A . n A 1 14 PRO 14 14 ? ? ? A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 ASN 28 28 28 ASN ASN A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 GLN 32 32 32 GLN GLN A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 ARG 35 35 35 ARG ARG A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 ASN 38 38 38 ASN ASN A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 SER 42 42 42 SER SER A . n A 1 43 GLN 43 43 43 GLN GLN A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 PRO 45 45 45 PRO PRO A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 ARG 47 47 47 ARG ARG A . n A 1 48 GLN 48 48 48 GLN GLN A . n A 1 49 MET 49 49 49 MET MET A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 THR 51 51 51 THR THR A . n A 1 52 PRO 52 52 52 PRO PRO A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 TYR 55 55 55 TYR TYR A . n A 1 56 THR 56 56 56 THR THR A . n A 1 57 MET 57 57 57 MET MET A . n A 1 58 SER 58 58 58 SER SER A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 MET 61 61 61 MET MET A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 CYS 64 64 64 CYS CYS A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 HIS 66 66 66 HIS HIS A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 TRP 69 69 69 TRP TRP A . n A 1 70 THR 70 70 70 THR THR A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 HIS 72 72 72 HIS HIS A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 GLN 74 74 74 GLN GLN A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 TYR 76 76 76 TYR TYR A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 TYR 78 78 78 TYR TYR A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 PRO 80 80 80 PRO PRO A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 ASP 82 82 82 ASP ASP A . n A 1 83 PRO 83 83 83 PRO PRO A . n A 1 84 GLN 84 84 84 GLN GLN A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 ASN 86 86 86 ASN ASN A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 PRO 88 88 88 PRO PRO A . n A 1 89 TRP 89 89 89 TRP TRP A . n A 1 90 PRO 90 90 90 PRO PRO A . n A 1 91 ALA 91 91 91 ALA ALA A . n A 1 92 MET 92 92 92 MET MET A . n A 1 93 PRO 93 93 93 PRO PRO A . n A 1 94 GLN 94 94 94 GLN GLN A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 PHE 96 96 96 PHE PHE A . n A 1 97 HIS 97 97 97 HIS HIS A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 CYS 100 100 100 CYS CYS A . n A 1 101 GLN 101 101 101 GLN GLN A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 THR 105 105 105 THR THR A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 GLY 108 108 108 GLY GLY A . n A 1 109 TYR 109 109 109 TYR TYR A . n A 1 110 PRO 110 110 110 PRO PRO A . n A 1 111 ASP 111 111 111 ASP ASP A . n A 1 112 PHE 112 112 112 PHE PHE A . n A 1 113 GLN 113 113 113 GLN GLN A . n A 1 114 PRO 114 114 114 PRO PRO A . n A 1 115 ASP 115 115 115 ASP ASP A . n A 1 116 ALA 116 116 116 ALA ALA A . n A 1 117 CYS 117 117 117 CYS CYS A . n A 1 118 LEU 118 118 118 LEU LEU A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 ASN 120 120 120 ASN ASN A . n A 1 121 ARG 121 121 121 ARG ARG A . n A 1 122 TYR 122 122 122 TYR TYR A . n A 1 123 ALA 123 123 123 ALA ALA A . n A 1 124 PRO 124 124 124 PRO PRO A . n A 1 125 GLY 125 125 125 GLY GLY A . n A 1 126 ALA 126 126 126 ALA ALA A . n A 1 127 LYS 127 127 127 LYS LYS A . n A 1 128 LEU 128 128 128 LEU LEU A . n A 1 129 SER 129 129 129 SER SER A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 HIS 131 131 131 HIS HIS A . n A 1 132 GLN 132 132 132 GLN GLN A . n A 1 133 ASP 133 133 133 ASP ASP A . n A 1 134 LYS 134 134 134 LYS LYS A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 GLU 136 136 136 GLU GLU A . n A 1 137 PRO 137 137 137 PRO PRO A . n A 1 138 ASP 138 138 138 ASP ASP A . n A 1 139 LEU 139 139 139 LEU LEU A . n A 1 140 ARG 140 140 140 ARG ARG A . n A 1 141 ALA 141 141 141 ALA ALA A . n A 1 142 PRO 142 142 142 PRO PRO A . n A 1 143 ILE 143 143 143 ILE ILE A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 SER 145 145 145 SER SER A . n A 1 146 VAL 146 146 146 VAL VAL A . n A 1 147 SER 147 147 147 SER SER A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 GLY 149 149 149 GLY GLY A . n A 1 150 LEU 150 150 150 LEU LEU A . n A 1 151 PRO 151 151 151 PRO PRO A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 ILE 153 153 153 ILE ILE A . n A 1 154 PHE 154 154 154 PHE PHE A . n A 1 155 GLN 155 155 155 GLN GLN A . n A 1 156 PHE 156 156 156 PHE PHE A . n A 1 157 GLY 157 157 157 GLY GLY A . n A 1 158 GLY 158 158 158 GLY GLY A . n A 1 159 LEU 159 159 159 LEU LEU A . n A 1 160 LYS 160 160 160 LYS LYS A . n A 1 161 ARG 161 161 161 ARG ARG A . n A 1 162 ASN 162 162 162 ASN ASN A . n A 1 163 ASP 163 163 163 ASP ASP A . n A 1 164 PRO 164 164 164 PRO PRO A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 LYS 166 166 166 LYS LYS A . n A 1 167 ARG 167 167 167 ARG ARG A . n A 1 168 LEU 168 168 168 LEU LEU A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 LEU 170 170 170 LEU LEU A . n A 1 171 GLU 171 171 171 GLU GLU A . n A 1 172 HIS 172 172 172 HIS HIS A . n A 1 173 GLY 173 173 173 GLY GLY A . n A 1 174 ASP 174 174 174 ASP ASP A . n A 1 175 VAL 175 175 175 VAL VAL A . n A 1 176 VAL 176 176 176 VAL VAL A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 TRP 178 178 178 TRP TRP A . n A 1 179 GLY 179 179 179 GLY GLY A . n A 1 180 GLY 180 180 180 GLY GLY A . n A 1 181 GLU 181 181 181 GLU GLU A . n A 1 182 SER 182 182 182 SER SER A . n A 1 183 ARG 183 183 183 ARG ARG A . n A 1 184 LEU 184 184 184 LEU LEU A . n A 1 185 PHE 185 185 185 PHE PHE A . n A 1 186 TYR 186 186 186 TYR TYR A . n A 1 187 HIS 187 187 187 HIS HIS A . n A 1 188 GLY 188 188 188 GLY GLY A . n A 1 189 ILE 189 189 189 ILE ILE A . n A 1 190 GLN 190 190 190 GLN GLN A . n A 1 191 PRO 191 191 191 PRO PRO A . n A 1 192 LEU 192 192 192 LEU LEU A . n A 1 193 LYS 193 193 193 LYS LYS A . n A 1 194 ALA 194 194 194 ALA ALA A . n A 1 195 GLY 195 195 195 GLY GLY A . n A 1 196 PHE 196 196 196 PHE PHE A . n A 1 197 HIS 197 197 197 HIS HIS A . n A 1 198 PRO 198 198 198 PRO PRO A . n A 1 199 LEU 199 199 199 LEU LEU A . n A 1 200 THR 200 200 200 THR THR A . n A 1 201 ILE 201 201 201 ILE ILE A . n A 1 202 ASP 202 202 202 ASP ASP A . n A 1 203 CYS 203 203 203 CYS CYS A . n A 1 204 ARG 204 204 204 ARG ARG A . n A 1 205 TYR 205 205 205 TYR TYR A . n A 1 206 ASN 206 206 206 ASN ASN A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 THR 208 208 208 THR THR A . n A 1 209 PHE 209 209 209 PHE PHE A . n A 1 210 ARG 210 210 210 ARG ARG A . n A 1 211 GLN 211 211 211 GLN GLN A . n A 1 212 ALA 212 212 212 ALA ALA A . n A 1 213 GLY 213 213 213 GLY GLY A . n A 1 214 LYS 214 214 ? ? ? A . n A 1 215 LYS 215 215 ? ? ? A . n A 1 216 GLU 216 216 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE 1 301 1 FE FE A . C 3 AKG 1 302 1 AKG AKG A . D 4 HOH 1 401 29 HOH HOH A . D 4 HOH 2 402 30 HOH HOH A . D 4 HOH 3 403 24 HOH HOH A . D 4 HOH 4 404 13 HOH HOH A . D 4 HOH 5 405 52 HOH HOH A . D 4 HOH 6 406 15 HOH HOH A . D 4 HOH 7 407 40 HOH HOH A . D 4 HOH 8 408 47 HOH HOH A . D 4 HOH 9 409 22 HOH HOH A . D 4 HOH 10 410 14 HOH HOH A . D 4 HOH 11 411 4 HOH HOH A . D 4 HOH 12 412 16 HOH HOH A . D 4 HOH 13 413 21 HOH HOH A . D 4 HOH 14 414 91 HOH HOH A . D 4 HOH 15 415 27 HOH HOH A . D 4 HOH 16 416 19 HOH HOH A . D 4 HOH 17 417 31 HOH HOH A . D 4 HOH 18 418 6 HOH HOH A . D 4 HOH 19 419 35 HOH HOH A . D 4 HOH 20 420 2 HOH HOH A . D 4 HOH 21 421 28 HOH HOH A . D 4 HOH 22 422 53 HOH HOH A . D 4 HOH 23 423 5 HOH HOH A . D 4 HOH 24 424 26 HOH HOH A . D 4 HOH 25 425 17 HOH HOH A . D 4 HOH 26 426 45 HOH HOH A . D 4 HOH 27 427 39 HOH HOH A . D 4 HOH 28 428 7 HOH HOH A . D 4 HOH 29 429 3 HOH HOH A . D 4 HOH 30 430 20 HOH HOH A . D 4 HOH 31 431 65 HOH HOH A . D 4 HOH 32 432 1 HOH HOH A . D 4 HOH 33 433 73 HOH HOH A . D 4 HOH 34 434 8 HOH HOH A . D 4 HOH 35 435 56 HOH HOH A . D 4 HOH 36 436 76 HOH HOH A . D 4 HOH 37 437 12 HOH HOH A . D 4 HOH 38 438 37 HOH HOH A . D 4 HOH 39 439 32 HOH HOH A . D 4 HOH 40 440 70 HOH HOH A . D 4 HOH 41 441 68 HOH HOH A . D 4 HOH 42 442 74 HOH HOH A . D 4 HOH 43 443 10 HOH HOH A . D 4 HOH 44 444 84 HOH HOH A . D 4 HOH 45 445 18 HOH HOH A . D 4 HOH 46 446 89 HOH HOH A . D 4 HOH 47 447 38 HOH HOH A . D 4 HOH 48 448 11 HOH HOH A . D 4 HOH 49 449 66 HOH HOH A . D 4 HOH 50 450 25 HOH HOH A . D 4 HOH 51 451 46 HOH HOH A . D 4 HOH 52 452 87 HOH HOH A . D 4 HOH 53 453 63 HOH HOH A . D 4 HOH 54 454 49 HOH HOH A . D 4 HOH 55 455 23 HOH HOH A . D 4 HOH 56 456 62 HOH HOH A . D 4 HOH 57 457 41 HOH HOH A . D 4 HOH 58 458 92 HOH HOH A . D 4 HOH 59 459 86 HOH HOH A . D 4 HOH 60 460 67 HOH HOH A . D 4 HOH 61 461 36 HOH HOH A . D 4 HOH 62 462 88 HOH HOH A . D 4 HOH 63 463 57 HOH HOH A . D 4 HOH 64 464 79 HOH HOH A . D 4 HOH 65 465 75 HOH HOH A . D 4 HOH 66 466 71 HOH HOH A . D 4 HOH 67 467 9 HOH HOH A . D 4 HOH 68 468 77 HOH HOH A . D 4 HOH 69 469 50 HOH HOH A . D 4 HOH 70 470 72 HOH HOH A . D 4 HOH 71 471 51 HOH HOH A . D 4 HOH 72 472 90 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LEU 15 ? CG ? A LEU 15 CG 2 1 Y 1 A LEU 15 ? CD1 ? A LEU 15 CD1 3 1 Y 1 A LEU 15 ? CD2 ? A LEU 15 CD2 4 1 Y 1 A ARG 24 ? CG ? A ARG 24 CG 5 1 Y 1 A ARG 24 ? CD ? A ARG 24 CD 6 1 Y 1 A ARG 24 ? NE ? A ARG 24 NE 7 1 Y 1 A ARG 24 ? CZ ? A ARG 24 CZ 8 1 Y 1 A ARG 24 ? NH1 ? A ARG 24 NH1 9 1 Y 1 A ARG 24 ? NH2 ? A ARG 24 NH2 10 1 Y 1 A ARG 35 ? CD ? A ARG 35 CD 11 1 Y 1 A ARG 35 ? NE ? A ARG 35 NE 12 1 Y 1 A ARG 35 ? CZ ? A ARG 35 CZ 13 1 Y 1 A ARG 35 ? NH1 ? A ARG 35 NH1 14 1 Y 1 A ARG 35 ? NH2 ? A ARG 35 NH2 15 1 Y 1 A TYR 55 ? CG ? A TYR 55 CG 16 1 Y 1 A TYR 55 ? CD1 ? A TYR 55 CD1 17 1 Y 1 A TYR 55 ? CD2 ? A TYR 55 CD2 18 1 Y 1 A TYR 55 ? CE1 ? A TYR 55 CE1 19 1 Y 1 A TYR 55 ? CE2 ? A TYR 55 CE2 20 1 Y 1 A TYR 55 ? CZ ? A TYR 55 CZ 21 1 Y 1 A TYR 55 ? OH ? A TYR 55 OH 22 1 Y 1 A ARG 73 ? CG ? A ARG 73 CG 23 1 Y 1 A ARG 73 ? CD ? A ARG 73 CD 24 1 Y 1 A ARG 73 ? NE ? A ARG 73 NE 25 1 Y 1 A ARG 73 ? CZ ? A ARG 73 CZ 26 1 Y 1 A ARG 73 ? NH1 ? A ARG 73 NH1 27 1 Y 1 A ARG 73 ? NH2 ? A ARG 73 NH2 28 1 Y 1 A LEU 77 ? CG ? A LEU 77 CG 29 1 Y 1 A LEU 77 ? CD1 ? A LEU 77 CD1 30 1 Y 1 A LEU 77 ? CD2 ? A LEU 77 CD2 31 1 Y 1 A ASN 98 ? CG ? A ASN 98 CG 32 1 Y 1 A ASN 98 ? OD1 ? A ASN 98 OD1 33 1 Y 1 A ASN 98 ? ND2 ? A ASN 98 ND2 34 1 Y 1 A GLN 101 ? CD ? A GLN 101 CD 35 1 Y 1 A GLN 101 ? OE1 ? A GLN 101 OE1 36 1 Y 1 A GLN 101 ? NE2 ? A GLN 101 NE2 37 1 Y 1 A GLN 113 ? CG ? A GLN 113 CG 38 1 Y 1 A GLN 113 ? CD ? A GLN 113 CD 39 1 Y 1 A GLN 113 ? OE1 ? A GLN 113 OE1 40 1 Y 1 A GLN 113 ? NE2 ? A GLN 113 NE2 41 1 Y 1 A LYS 127 ? CD ? A LYS 127 CD 42 1 Y 1 A LYS 127 ? CE ? A LYS 127 CE 43 1 Y 1 A LYS 127 ? NZ ? A LYS 127 NZ 44 1 Y 1 A LEU 130 ? CG ? A LEU 130 CG 45 1 Y 1 A LEU 130 ? CD1 ? A LEU 130 CD1 46 1 Y 1 A LEU 130 ? CD2 ? A LEU 130 CD2 47 1 Y 1 A LYS 134 ? CE ? A LYS 134 CE 48 1 Y 1 A LYS 134 ? NZ ? A LYS 134 NZ 49 1 Y 1 A ARG 140 ? CZ ? A ARG 140 CZ 50 1 Y 1 A ARG 140 ? NH1 ? A ARG 140 NH1 51 1 Y 1 A ARG 140 ? NH2 ? A ARG 140 NH2 52 1 Y 1 A LYS 160 ? CD ? A LYS 160 CD 53 1 Y 1 A LYS 160 ? CE ? A LYS 160 CE 54 1 Y 1 A LYS 160 ? NZ ? A LYS 160 NZ 55 1 Y 1 A ASN 162 ? CG ? A ASN 162 CG 56 1 Y 1 A ASN 162 ? OD1 ? A ASN 162 OD1 57 1 Y 1 A ASN 162 ? ND2 ? A ASN 162 ND2 58 1 Y 1 A LYS 166 ? CE ? A LYS 166 CE 59 1 Y 1 A LYS 166 ? NZ ? A LYS 166 NZ 60 1 Y 1 A LEU 184 ? CD1 ? A LEU 184 CD1 61 1 Y 1 A LEU 184 ? CD2 ? A LEU 184 CD2 62 1 Y 1 A LYS 193 ? CG ? A LYS 193 CG 63 1 Y 1 A LYS 193 ? CD ? A LYS 193 CD 64 1 Y 1 A LYS 193 ? CE ? A LYS 193 CE 65 1 Y 1 A LYS 193 ? NZ ? A LYS 193 NZ # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.14_3260 1 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? GDA ? ? ? . 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DIALS ? ? ? 1.8 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? DIALS ? ? ? 1.8 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.angle_alpha 78.140 _cell.angle_alpha_esd ? _cell.angle_beta 76.040 _cell.angle_beta_esd ? _cell.angle_gamma 66.510 _cell.angle_gamma_esd ? _cell.entry_id 6YPV _cell.details ? _cell.formula_units_Z ? _cell.length_a 37.037 _cell.length_a_esd ? _cell.length_b 39.107 _cell.length_b_esd ? _cell.length_c 40.860 _cell.length_c_esd ? _cell.volume 52274.103 _cell.volume_esd ? _cell.Z_PDB 1 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6YPV _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6YPV _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.17 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 43.29 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'BATCH MODE' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '25% w/v PEG 3350, 5% v/v glycerol and 200 mM sodium ormate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 293 _diffrn.ambient_temp_details 'room temperature' _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment Y # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-09-26 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator Si111 _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.96863 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I24' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.96863 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I24 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate 23.04 _reflns.entry_id 6YPV _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.1 _reflns.d_resolution_low 39.35 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 11994 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 25.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 48.4 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.874 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split 0.333 # _reflns_shell.d_res_high 2.1 _reflns_shell.d_res_low 2.136 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 8.795 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 593 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.414 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split 0.617 # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 26.83 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6YPV _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.10 _refine.ls_d_res_low 39.35 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 11819 _refine.ls_number_reflns_R_free 1181 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.88 _refine.ls_percent_reflns_R_free 9.99 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2225 _refine.ls_R_factor_R_free 0.2505 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2194 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.98 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4JHT _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 27.3511 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2596 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 39.35 _refine_hist.number_atoms_solvent 72 _refine_hist.number_atoms_total 1573 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1490 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 11 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0040 ? 1566 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.5315 ? 2142 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0431 ? 229 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0026 ? 289 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 14.0146 ? 923 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.10 2.20 . . 151 1359 99.93 . . . 0.2880 . 0.2850 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.20 2.31 . . 146 1316 99.80 . . . 0.3485 . 0.2550 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.31 2.46 . . 150 1321 99.86 . . . 0.2895 . 0.2509 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.46 2.65 . . 146 1339 99.73 . . . 0.3025 . 0.2543 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.65 2.91 . . 149 1308 99.93 . . . 0.2601 . 0.2382 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.91 3.33 . . 143 1320 99.86 . . . 0.2530 . 0.2162 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.33 4.20 . . 149 1343 100.00 . . . 0.2211 . 0.1863 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.20 39.35 . . 147 1332 99.93 . . . 0.2069 . 0.1923 . . . . . . . . . . . # _struct.entry_id 6YPV _struct.title 'Alpha-ketoglutarate-dependent dioxygenase AlkB in complex with Fe and AKG after oxygen exposure using FT-SSX methods' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6YPV _struct_keywords.text 'iron dependent dioxygenase, DNA repait, 2-oxoglutarate, OXIDOREDUCTASE' _struct_keywords.pdbx_keywords OXIDOREDUCTASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ALKB_ECOLI _struct_ref.pdbx_db_accession P05050 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MLDLFADAEPWQEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSP IDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLK RNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTIDCRYNLTFRQAGKKE ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6YPV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 216 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P05050 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 216 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 216 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 550 ? 1 MORE -15 ? 1 'SSA (A^2)' 9040 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA A 29 ? SER A 44 ? ALA A 29 SER A 44 1 ? 16 HELX_P HELX_P2 AA2 PRO A 93 ? ALA A 107 ? PRO A 93 ALA A 107 1 ? 15 HELX_P HELX_P3 AA3 GLY A 180 ? PHE A 185 ? GLY A 180 PHE A 185 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 131 NE2 ? ? ? 1_555 B FE . FE ? ? A HIS 131 A FE 301 1_555 ? ? ? ? ? ? ? 2.357 ? ? metalc2 metalc ? ? A ASP 133 OD2 ? ? ? 1_555 B FE . FE ? ? A ASP 133 A FE 301 1_555 ? ? ? ? ? ? ? 1.968 ? ? metalc3 metalc ? ? A HIS 187 NE2 ? ? ? 1_555 B FE . FE ? ? A HIS 187 A FE 301 1_555 ? ? ? ? ? ? ? 2.110 ? ? metalc4 metalc ? ? B FE . FE ? ? ? 1_555 C AKG . O2 ? ? A FE 301 A AKG 302 1_555 ? ? ? ? ? ? ? 2.227 ? ? metalc5 metalc ? ? B FE . FE ? ? ? 1_555 C AKG . O5 ? ? A FE 301 A AKG 302 1_555 ? ? ? ? ? ? ? 2.278 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 131 ? A HIS 131 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 OD2 ? A ASP 133 ? A ASP 133 ? 1_555 118.5 ? 2 NE2 ? A HIS 131 ? A HIS 131 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 NE2 ? A HIS 187 ? A HIS 187 ? 1_555 87.8 ? 3 OD2 ? A ASP 133 ? A ASP 133 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 NE2 ? A HIS 187 ? A HIS 187 ? 1_555 87.2 ? 4 NE2 ? A HIS 131 ? A HIS 131 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 O2 ? C AKG . ? A AKG 302 ? 1_555 91.9 ? 5 OD2 ? A ASP 133 ? A ASP 133 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 O2 ? C AKG . ? A AKG 302 ? 1_555 103.7 ? 6 NE2 ? A HIS 187 ? A HIS 187 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 O2 ? C AKG . ? A AKG 302 ? 1_555 167.6 ? 7 NE2 ? A HIS 131 ? A HIS 131 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 O5 ? C AKG . ? A AKG 302 ? 1_555 87.0 ? 8 OD2 ? A ASP 133 ? A ASP 133 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 O5 ? C AKG . ? A AKG 302 ? 1_555 154.5 ? 9 NE2 ? A HIS 187 ? A HIS 187 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 O5 ? C AKG . ? A AKG 302 ? 1_555 92.0 ? 10 O2 ? C AKG . ? A AKG 302 ? 1_555 FE ? B FE . ? A FE 301 ? 1_555 O5 ? C AKG . ? A AKG 302 ? 1_555 75.7 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 2 ? AA3 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA A 19 ? LEU A 22 ? ALA A 19 LEU A 22 AA1 2 VAL A 175 ? TRP A 178 ? VAL A 175 TRP A 178 AA1 3 ILE A 143 ? GLY A 149 ? ILE A 143 GLY A 149 AA1 4 ARG A 204 ? ARG A 210 ? ARG A 204 ARG A 210 AA1 5 ALA A 116 ? TYR A 122 ? ALA A 116 TYR A 122 AA1 6 ALA A 60 ? GLY A 65 ? ALA A 60 GLY A 65 AA2 1 GLY A 68 ? THR A 71 ? GLY A 68 THR A 71 AA2 2 TYR A 76 ? SER A 79 ? TYR A 76 SER A 79 AA3 1 LEU A 128 ? HIS A 131 ? LEU A 128 HIS A 131 AA3 2 HIS A 187 ? ILE A 189 ? HIS A 187 ILE A 189 AA3 3 ALA A 152 ? PHE A 156 ? ALA A 152 PHE A 156 AA3 4 LYS A 166 ? LEU A 170 ? LYS A 166 LEU A 170 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 22 ? N LEU A 22 O VAL A 175 ? O VAL A 175 AA1 2 3 O VAL A 176 ? O VAL A 176 N SER A 145 ? N SER A 145 AA1 3 4 N VAL A 144 ? N VAL A 144 O PHE A 209 ? O PHE A 209 AA1 4 5 O ARG A 204 ? O ARG A 204 N TYR A 122 ? N TYR A 122 AA1 5 6 O ILE A 119 ? O ILE A 119 N THR A 62 ? N THR A 62 AA2 1 2 N THR A 70 ? N THR A 70 O LEU A 77 ? O LEU A 77 AA3 1 2 N LEU A 128 ? N LEU A 128 O ILE A 189 ? O ILE A 189 AA3 2 3 O GLY A 188 ? O GLY A 188 N GLN A 155 ? N GLN A 155 AA3 3 4 N PHE A 156 ? N PHE A 156 O LYS A 166 ? O LYS A 166 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A FE 301 ? 4 'binding site for residue FE A 301' AC2 Software A AKG 302 ? 13 'binding site for residue AKG A 302' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HIS A 131 ? HIS A 131 . ? 1_555 ? 2 AC1 4 ASP A 133 ? ASP A 133 . ? 1_555 ? 3 AC1 4 HIS A 187 ? HIS A 187 . ? 1_555 ? 4 AC1 4 AKG C . ? AKG A 302 . ? 1_555 ? 5 AC2 13 LEU A 118 ? LEU A 118 . ? 1_555 ? 6 AC2 13 ASN A 120 ? ASN A 120 . ? 1_555 ? 7 AC2 13 TYR A 122 ? TYR A 122 . ? 1_555 ? 8 AC2 13 LEU A 128 ? LEU A 128 . ? 1_555 ? 9 AC2 13 HIS A 131 ? HIS A 131 . ? 1_555 ? 10 AC2 13 ASP A 133 ? ASP A 133 . ? 1_555 ? 11 AC2 13 HIS A 187 ? HIS A 187 . ? 1_555 ? 12 AC2 13 ILE A 189 ? ILE A 189 . ? 1_555 ? 13 AC2 13 ARG A 204 ? ARG A 204 . ? 1_555 ? 14 AC2 13 ASN A 206 ? ASN A 206 . ? 1_555 ? 15 AC2 13 ARG A 210 ? ARG A 210 . ? 1_555 ? 16 AC2 13 FE B . ? FE A 301 . ? 1_555 ? 17 AC2 13 HOH D . ? HOH A 407 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A ASP 133 ? ? HH12 A ARG 183 ? ? 1.60 2 1 O A HOH 463 ? ? O A HOH 471 ? ? 2.09 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 201 ? ? 72.70 -75.31 2 1 ASP A 202 ? ? -143.32 23.95 # _space_group_symop.id 1 _space_group_symop.operation_xyz x,y,z # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 2.13268585591 13.4821699824 -3.17775095925 0.196975111199 ? -0.0313629714566 ? 0.00112110086569 ? 0.169073094961 ? 0.088952479482 ? 0.222824545859 ? 1.38909533684 ? -0.745721963832 ? 1.82791914753 ? 3.745613308 ? 1.00075344179 ? 7.47143291825 ? -0.111168050542 ? 0.14842259387 ? 0.236688936262 ? -0.0474541220809 ? 0.175552880057 ? -0.162722698864 ? -0.533837683658 ? -0.45093765139 ? -0.15998082127 ? 2 'X-RAY DIFFRACTION' ? refined 0.507948196543 -8.0339445911 -6.84188624177 0.173631590778 ? 0.00548465721883 ? -0.0353329243062 ? 0.130182607886 ? -0.00937875482867 ? 0.107543799917 ? 6.29143726893 ? 1.96352344089 ? -0.420793556136 ? 6.57826952922 ? -0.351115663588 ? 0.65413974913 ? -0.0253431409122 ? -0.116432572975 ? -0.17081832942 ? -0.277854004095 ? -0.00827834634131 ? -0.0127537047827 ? 0.0355858963048 ? 0.0243878633814 ? 0.0415134105013 ? 3 'X-RAY DIFFRACTION' ? refined 3.06877735741 -12.056015622 5.81168449049 0.332933729339 ? -0.0595755012265 ? -0.0693320331413 ? 0.263693070858 ? 0.115089572863 ? 0.284235977839 ? 5.50792988039 ? 1.21699945988 ? -4.4880525837 ? 5.96224978317 ? -1.11294169249 ? 7.91083717756 ? 0.207815140817 ? -0.698275399339 ? -0.923949247169 ? 0.588323093098 ? -0.190077075459 ? 0.0806676185563 ? 0.1843239941 ? -0.0990404176613 ? 0.0524075160819 ? 4 'X-RAY DIFFRACTION' ? refined 8.83106052006 -14.134558749 -3.17205400211 0.147223646618 ? 0.0279300808918 ? 0.0226361699049 ? 0.155773250091 ? -0.0328398682178 ? 0.260808340005 ? 4.52713077365 ? 4.63676939627 ? -2.89939988104 ? 7.64148540885 ? -5.33086020553 ? 4.3877771719 ? 0.0185558061342 ? 0.00387734998457 ? -0.0427509713136 ? -0.38298224181 ? 0.000960565785976 ? -0.250407580116 ? 0.0211337874362 ? -0.0674292443516 ? 0.0283340003593 ? 5 'X-RAY DIFFRACTION' ? refined 12.4255301251 6.7980027716 -4.0476520962 0.16448515806 ? -0.0400217508053 ? 0.0115549553884 ? 0.203879013161 ? 0.0203180409941 ? 0.299676838219 ? 2.00489818786 ? -1.25757165808 ? -0.64191192854 ? 4.34482366061 ? 5.46233863345 ? 7.48083099591 ? -0.137424273032 ? 0.0914294894323 ? 0.567526389648 ? -0.484270426433 ? 0.482214364676 ? -0.873402395736 ? -0.454678608206 ? 0.508668303053 ? -0.353195801962 ? 6 'X-RAY DIFFRACTION' ? refined 5.94850327318 1.38789718993 0.471339211703 0.147269093754 ? 0.00957038154525 ? 0.0178944467803 ? 0.165349375968 ? 0.0243725694457 ? 0.145931762492 ? 3.47471944505 ? -1.94883771087 ? -0.565981928624 ? 3.30194241627 ? -0.845849547636 ? 1.70866512848 ? -0.000761509733376 ? 0.0432396618015 ? 0.0372329243841 ? 0.333264752717 ? 0.01488571494 ? -0.401351977029 ? 0.183677696822 ? 0.255476188772 ? -0.0260921766829 ? 7 'X-RAY DIFFRACTION' ? refined -4.27460155212 3.83427322381 1.29498119868 0.180625893258 ? 0.00250985631846 ? 0.0081832605446 ? 0.175986817909 ? 0.0458829204316 ? 0.174581102551 ? 2.15319251353 ? -0.0415559730462 ? 0.554031604313 ? 1.33577897121 ? 0.731920308391 ? 2.07894289692 ? -0.0324966086209 ? -0.288095974655 ? 0.00143906301406 ? 0.0949367762505 ? 0.0855681635227 ? 0.0490818488865 ? -0.0102526840582 ? -0.174986087524 ? -0.0433497155545 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 15 through 29 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 30 through 64 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 65 through 79 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 80 through 93 ) ; 5 'X-RAY DIFFRACTION' 5 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 94 through 106 ) ; 6 'X-RAY DIFFRACTION' 6 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 107 through 123 ) ; 7 'X-RAY DIFFRACTION' 7 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 124 through 213 ) ; # _pdbx_entry_details.entry_id 6YPV _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 472 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 5.90 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A LEU 2 ? A LEU 2 3 1 Y 1 A ASP 3 ? A ASP 3 4 1 Y 1 A LEU 4 ? A LEU 4 5 1 Y 1 A PHE 5 ? A PHE 5 6 1 Y 1 A ALA 6 ? A ALA 6 7 1 Y 1 A ASP 7 ? A ASP 7 8 1 Y 1 A ALA 8 ? A ALA 8 9 1 Y 1 A GLU 9 ? A GLU 9 10 1 Y 1 A PRO 10 ? A PRO 10 11 1 Y 1 A TRP 11 ? A TRP 11 12 1 Y 1 A GLN 12 ? A GLN 12 13 1 Y 1 A GLU 13 ? A GLU 13 14 1 Y 1 A PRO 14 ? A PRO 14 15 1 Y 1 A LYS 214 ? A LYS 214 16 1 Y 1 A LYS 215 ? A LYS 215 17 1 Y 1 A GLU 216 ? A GLU 216 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal AKG C1 C N N 1 AKG O1 O N N 2 AKG O2 O N N 3 AKG C2 C N N 4 AKG O5 O N N 5 AKG C3 C N N 6 AKG C4 C N N 7 AKG C5 C N N 8 AKG O3 O N N 9 AKG O4 O N N 10 AKG HO2 H N N 11 AKG H31 H N N 12 AKG H32 H N N 13 AKG H41 H N N 14 AKG H42 H N N 15 AKG HO4 H N N 16 ALA N N N N 17 ALA CA C N S 18 ALA C C N N 19 ALA O O N N 20 ALA CB C N N 21 ALA OXT O N N 22 ALA H H N N 23 ALA H2 H N N 24 ALA HA H N N 25 ALA HB1 H N N 26 ALA HB2 H N N 27 ALA HB3 H N N 28 ALA HXT H N N 29 ARG N N N N 30 ARG CA C N S 31 ARG C C N N 32 ARG O O N N 33 ARG CB C N N 34 ARG CG C N N 35 ARG CD C N N 36 ARG NE N N N 37 ARG CZ C N N 38 ARG NH1 N N N 39 ARG NH2 N N N 40 ARG OXT O N N 41 ARG H H N N 42 ARG H2 H N N 43 ARG HA H N N 44 ARG HB2 H N N 45 ARG HB3 H N N 46 ARG HG2 H N N 47 ARG HG3 H N N 48 ARG HD2 H N N 49 ARG HD3 H N N 50 ARG HE H N N 51 ARG HH11 H N N 52 ARG HH12 H N N 53 ARG HH21 H N N 54 ARG HH22 H N N 55 ARG HXT H N N 56 ASN N N N N 57 ASN CA C N S 58 ASN C C N N 59 ASN O O N N 60 ASN CB C N N 61 ASN CG C N N 62 ASN OD1 O N N 63 ASN ND2 N N N 64 ASN OXT O N N 65 ASN H H N N 66 ASN H2 H N N 67 ASN HA H N N 68 ASN HB2 H N N 69 ASN HB3 H N N 70 ASN HD21 H N N 71 ASN HD22 H N N 72 ASN HXT H N N 73 ASP N N N N 74 ASP CA C N S 75 ASP C C N N 76 ASP O O N N 77 ASP CB C N N 78 ASP CG C N N 79 ASP OD1 O N N 80 ASP OD2 O N N 81 ASP OXT O N N 82 ASP H H N N 83 ASP H2 H N N 84 ASP HA H N N 85 ASP HB2 H N N 86 ASP HB3 H N N 87 ASP HD2 H N N 88 ASP HXT H N N 89 CYS N N N N 90 CYS CA C N R 91 CYS C C N N 92 CYS O O N N 93 CYS CB C N N 94 CYS SG S N N 95 CYS OXT O N N 96 CYS H H N N 97 CYS H2 H N N 98 CYS HA H N N 99 CYS HB2 H N N 100 CYS HB3 H N N 101 CYS HG H N N 102 CYS HXT H N N 103 FE FE FE N N 104 GLN N N N N 105 GLN CA C N S 106 GLN C C N N 107 GLN O O N N 108 GLN CB C N N 109 GLN CG C N N 110 GLN CD C N N 111 GLN OE1 O N N 112 GLN NE2 N N N 113 GLN OXT O N N 114 GLN H H N N 115 GLN H2 H N N 116 GLN HA H N N 117 GLN HB2 H N N 118 GLN HB3 H N N 119 GLN HG2 H N N 120 GLN HG3 H N N 121 GLN HE21 H N N 122 GLN HE22 H N N 123 GLN HXT H N N 124 GLU N N N N 125 GLU CA C N S 126 GLU C C N N 127 GLU O O N N 128 GLU CB C N N 129 GLU CG C N N 130 GLU CD C N N 131 GLU OE1 O N N 132 GLU OE2 O N N 133 GLU OXT O N N 134 GLU H H N N 135 GLU H2 H N N 136 GLU HA H N N 137 GLU HB2 H N N 138 GLU HB3 H N N 139 GLU HG2 H N N 140 GLU HG3 H N N 141 GLU HE2 H N N 142 GLU HXT H N N 143 GLY N N N N 144 GLY CA C N N 145 GLY C C N N 146 GLY O O N N 147 GLY OXT O N N 148 GLY H H N N 149 GLY H2 H N N 150 GLY HA2 H N N 151 GLY HA3 H N N 152 GLY HXT H N N 153 HIS N N N N 154 HIS CA C N S 155 HIS C C N N 156 HIS O O N N 157 HIS CB C N N 158 HIS CG C Y N 159 HIS ND1 N Y N 160 HIS CD2 C Y N 161 HIS CE1 C Y N 162 HIS NE2 N Y N 163 HIS OXT O N N 164 HIS H H N N 165 HIS H2 H N N 166 HIS HA H N N 167 HIS HB2 H N N 168 HIS HB3 H N N 169 HIS HD1 H N N 170 HIS HD2 H N N 171 HIS HE1 H N N 172 HIS HE2 H N N 173 HIS HXT H N N 174 HOH O O N N 175 HOH H1 H N N 176 HOH H2 H N N 177 ILE N N N N 178 ILE CA C N S 179 ILE C C N N 180 ILE O O N N 181 ILE CB C N S 182 ILE CG1 C N N 183 ILE CG2 C N N 184 ILE CD1 C N N 185 ILE OXT O N N 186 ILE H H N N 187 ILE H2 H N N 188 ILE HA H N N 189 ILE HB H N N 190 ILE HG12 H N N 191 ILE HG13 H N N 192 ILE HG21 H N N 193 ILE HG22 H N N 194 ILE HG23 H N N 195 ILE HD11 H N N 196 ILE HD12 H N N 197 ILE HD13 H N N 198 ILE HXT H N N 199 LEU N N N N 200 LEU CA C N S 201 LEU C C N N 202 LEU O O N N 203 LEU CB C N N 204 LEU CG C N N 205 LEU CD1 C N N 206 LEU CD2 C N N 207 LEU OXT O N N 208 LEU H H N N 209 LEU H2 H N N 210 LEU HA H N N 211 LEU HB2 H N N 212 LEU HB3 H N N 213 LEU HG H N N 214 LEU HD11 H N N 215 LEU HD12 H N N 216 LEU HD13 H N N 217 LEU HD21 H N N 218 LEU HD22 H N N 219 LEU HD23 H N N 220 LEU HXT H N N 221 LYS N N N N 222 LYS CA C N S 223 LYS C C N N 224 LYS O O N N 225 LYS CB C N N 226 LYS CG C N N 227 LYS CD C N N 228 LYS CE C N N 229 LYS NZ N N N 230 LYS OXT O N N 231 LYS H H N N 232 LYS H2 H N N 233 LYS HA H N N 234 LYS HB2 H N N 235 LYS HB3 H N N 236 LYS HG2 H N N 237 LYS HG3 H N N 238 LYS HD2 H N N 239 LYS HD3 H N N 240 LYS HE2 H N N 241 LYS HE3 H N N 242 LYS HZ1 H N N 243 LYS HZ2 H N N 244 LYS HZ3 H N N 245 LYS HXT H N N 246 MET N N N N 247 MET CA C N S 248 MET C C N N 249 MET O O N N 250 MET CB C N N 251 MET CG C N N 252 MET SD S N N 253 MET CE C N N 254 MET OXT O N N 255 MET H H N N 256 MET H2 H N N 257 MET HA H N N 258 MET HB2 H N N 259 MET HB3 H N N 260 MET HG2 H N N 261 MET HG3 H N N 262 MET HE1 H N N 263 MET HE2 H N N 264 MET HE3 H N N 265 MET HXT H N N 266 PHE N N N N 267 PHE CA C N S 268 PHE C C N N 269 PHE O O N N 270 PHE CB C N N 271 PHE CG C Y N 272 PHE CD1 C Y N 273 PHE CD2 C Y N 274 PHE CE1 C Y N 275 PHE CE2 C Y N 276 PHE CZ C Y N 277 PHE OXT O N N 278 PHE H H N N 279 PHE H2 H N N 280 PHE HA H N N 281 PHE HB2 H N N 282 PHE HB3 H N N 283 PHE HD1 H N N 284 PHE HD2 H N N 285 PHE HE1 H N N 286 PHE HE2 H N N 287 PHE HZ H N N 288 PHE HXT H N N 289 PRO N N N N 290 PRO CA C N S 291 PRO C C N N 292 PRO O O N N 293 PRO CB C N N 294 PRO CG C N N 295 PRO CD C N N 296 PRO OXT O N N 297 PRO H H N N 298 PRO HA H N N 299 PRO HB2 H N N 300 PRO HB3 H N N 301 PRO HG2 H N N 302 PRO HG3 H N N 303 PRO HD2 H N N 304 PRO HD3 H N N 305 PRO HXT H N N 306 SER N N N N 307 SER CA C N S 308 SER C C N N 309 SER O O N N 310 SER CB C N N 311 SER OG O N N 312 SER OXT O N N 313 SER H H N N 314 SER H2 H N N 315 SER HA H N N 316 SER HB2 H N N 317 SER HB3 H N N 318 SER HG H N N 319 SER HXT H N N 320 THR N N N N 321 THR CA C N S 322 THR C C N N 323 THR O O N N 324 THR CB C N R 325 THR OG1 O N N 326 THR CG2 C N N 327 THR OXT O N N 328 THR H H N N 329 THR H2 H N N 330 THR HA H N N 331 THR HB H N N 332 THR HG1 H N N 333 THR HG21 H N N 334 THR HG22 H N N 335 THR HG23 H N N 336 THR HXT H N N 337 TRP N N N N 338 TRP CA C N S 339 TRP C C N N 340 TRP O O N N 341 TRP CB C N N 342 TRP CG C Y N 343 TRP CD1 C Y N 344 TRP CD2 C Y N 345 TRP NE1 N Y N 346 TRP CE2 C Y N 347 TRP CE3 C Y N 348 TRP CZ2 C Y N 349 TRP CZ3 C Y N 350 TRP CH2 C Y N 351 TRP OXT O N N 352 TRP H H N N 353 TRP H2 H N N 354 TRP HA H N N 355 TRP HB2 H N N 356 TRP HB3 H N N 357 TRP HD1 H N N 358 TRP HE1 H N N 359 TRP HE3 H N N 360 TRP HZ2 H N N 361 TRP HZ3 H N N 362 TRP HH2 H N N 363 TRP HXT H N N 364 TYR N N N N 365 TYR CA C N S 366 TYR C C N N 367 TYR O O N N 368 TYR CB C N N 369 TYR CG C Y N 370 TYR CD1 C Y N 371 TYR CD2 C Y N 372 TYR CE1 C Y N 373 TYR CE2 C Y N 374 TYR CZ C Y N 375 TYR OH O N N 376 TYR OXT O N N 377 TYR H H N N 378 TYR H2 H N N 379 TYR HA H N N 380 TYR HB2 H N N 381 TYR HB3 H N N 382 TYR HD1 H N N 383 TYR HD2 H N N 384 TYR HE1 H N N 385 TYR HE2 H N N 386 TYR HH H N N 387 TYR HXT H N N 388 VAL N N N N 389 VAL CA C N S 390 VAL C C N N 391 VAL O O N N 392 VAL CB C N N 393 VAL CG1 C N N 394 VAL CG2 C N N 395 VAL OXT O N N 396 VAL H H N N 397 VAL H2 H N N 398 VAL HA H N N 399 VAL HB H N N 400 VAL HG11 H N N 401 VAL HG12 H N N 402 VAL HG13 H N N 403 VAL HG21 H N N 404 VAL HG22 H N N 405 VAL HG23 H N N 406 VAL HXT H N N 407 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AKG C1 O1 doub N N 1 AKG C1 O2 sing N N 2 AKG C1 C2 sing N N 3 AKG O2 HO2 sing N N 4 AKG C2 O5 doub N N 5 AKG C2 C3 sing N N 6 AKG C3 C4 sing N N 7 AKG C3 H31 sing N N 8 AKG C3 H32 sing N N 9 AKG C4 C5 sing N N 10 AKG C4 H41 sing N N 11 AKG C4 H42 sing N N 12 AKG C5 O3 doub N N 13 AKG C5 O4 sing N N 14 AKG O4 HO4 sing N N 15 ALA N CA sing N N 16 ALA N H sing N N 17 ALA N H2 sing N N 18 ALA CA C sing N N 19 ALA CA CB sing N N 20 ALA CA HA sing N N 21 ALA C O doub N N 22 ALA C OXT sing N N 23 ALA CB HB1 sing N N 24 ALA CB HB2 sing N N 25 ALA CB HB3 sing N N 26 ALA OXT HXT sing N N 27 ARG N CA sing N N 28 ARG N H sing N N 29 ARG N H2 sing N N 30 ARG CA C sing N N 31 ARG CA CB sing N N 32 ARG CA HA sing N N 33 ARG C O doub N N 34 ARG C OXT sing N N 35 ARG CB CG sing N N 36 ARG CB HB2 sing N N 37 ARG CB HB3 sing N N 38 ARG CG CD sing N N 39 ARG CG HG2 sing N N 40 ARG CG HG3 sing N N 41 ARG CD NE sing N N 42 ARG CD HD2 sing N N 43 ARG CD HD3 sing N N 44 ARG NE CZ sing N N 45 ARG NE HE sing N N 46 ARG CZ NH1 sing N N 47 ARG CZ NH2 doub N N 48 ARG NH1 HH11 sing N N 49 ARG NH1 HH12 sing N N 50 ARG NH2 HH21 sing N N 51 ARG NH2 HH22 sing N N 52 ARG OXT HXT sing N N 53 ASN N CA sing N N 54 ASN N H sing N N 55 ASN N H2 sing N N 56 ASN CA C sing N N 57 ASN CA CB sing N N 58 ASN CA HA sing N N 59 ASN C O doub N N 60 ASN C OXT sing N N 61 ASN CB CG sing N N 62 ASN CB HB2 sing N N 63 ASN CB HB3 sing N N 64 ASN CG OD1 doub N N 65 ASN CG ND2 sing N N 66 ASN ND2 HD21 sing N N 67 ASN ND2 HD22 sing N N 68 ASN OXT HXT sing N N 69 ASP N CA sing N N 70 ASP N H sing N N 71 ASP N H2 sing N N 72 ASP CA C sing N N 73 ASP CA CB sing N N 74 ASP CA HA sing N N 75 ASP C O doub N N 76 ASP C OXT sing N N 77 ASP CB CG sing N N 78 ASP CB HB2 sing N N 79 ASP CB HB3 sing N N 80 ASP CG OD1 doub N N 81 ASP CG OD2 sing N N 82 ASP OD2 HD2 sing N N 83 ASP OXT HXT sing N N 84 CYS N CA sing N N 85 CYS N H sing N N 86 CYS N H2 sing N N 87 CYS CA C sing N N 88 CYS CA CB sing N N 89 CYS CA HA sing N N 90 CYS C O doub N N 91 CYS C OXT sing N N 92 CYS CB SG sing N N 93 CYS CB HB2 sing N N 94 CYS CB HB3 sing N N 95 CYS SG HG sing N N 96 CYS OXT HXT sing N N 97 GLN N CA sing N N 98 GLN N H sing N N 99 GLN N H2 sing N N 100 GLN CA C sing N N 101 GLN CA CB sing N N 102 GLN CA HA sing N N 103 GLN C O doub N N 104 GLN C OXT sing N N 105 GLN CB CG sing N N 106 GLN CB HB2 sing N N 107 GLN CB HB3 sing N N 108 GLN CG CD sing N N 109 GLN CG HG2 sing N N 110 GLN CG HG3 sing N N 111 GLN CD OE1 doub N N 112 GLN CD NE2 sing N N 113 GLN NE2 HE21 sing N N 114 GLN NE2 HE22 sing N N 115 GLN OXT HXT sing N N 116 GLU N CA sing N N 117 GLU N H sing N N 118 GLU N H2 sing N N 119 GLU CA C sing N N 120 GLU CA CB sing N N 121 GLU CA HA sing N N 122 GLU C O doub N N 123 GLU C OXT sing N N 124 GLU CB CG sing N N 125 GLU CB HB2 sing N N 126 GLU CB HB3 sing N N 127 GLU CG CD sing N N 128 GLU CG HG2 sing N N 129 GLU CG HG3 sing N N 130 GLU CD OE1 doub N N 131 GLU CD OE2 sing N N 132 GLU OE2 HE2 sing N N 133 GLU OXT HXT sing N N 134 GLY N CA sing N N 135 GLY N H sing N N 136 GLY N H2 sing N N 137 GLY CA C sing N N 138 GLY CA HA2 sing N N 139 GLY CA HA3 sing N N 140 GLY C O doub N N 141 GLY C OXT sing N N 142 GLY OXT HXT sing N N 143 HIS N CA sing N N 144 HIS N H sing N N 145 HIS N H2 sing N N 146 HIS CA C sing N N 147 HIS CA CB sing N N 148 HIS CA HA sing N N 149 HIS C O doub N N 150 HIS C OXT sing N N 151 HIS CB CG sing N N 152 HIS CB HB2 sing N N 153 HIS CB HB3 sing N N 154 HIS CG ND1 sing Y N 155 HIS CG CD2 doub Y N 156 HIS ND1 CE1 doub Y N 157 HIS ND1 HD1 sing N N 158 HIS CD2 NE2 sing Y N 159 HIS CD2 HD2 sing N N 160 HIS CE1 NE2 sing Y N 161 HIS CE1 HE1 sing N N 162 HIS NE2 HE2 sing N N 163 HIS OXT HXT sing N N 164 HOH O H1 sing N N 165 HOH O H2 sing N N 166 ILE N CA sing N N 167 ILE N H sing N N 168 ILE N H2 sing N N 169 ILE CA C sing N N 170 ILE CA CB sing N N 171 ILE CA HA sing N N 172 ILE C O doub N N 173 ILE C OXT sing N N 174 ILE CB CG1 sing N N 175 ILE CB CG2 sing N N 176 ILE CB HB sing N N 177 ILE CG1 CD1 sing N N 178 ILE CG1 HG12 sing N N 179 ILE CG1 HG13 sing N N 180 ILE CG2 HG21 sing N N 181 ILE CG2 HG22 sing N N 182 ILE CG2 HG23 sing N N 183 ILE CD1 HD11 sing N N 184 ILE CD1 HD12 sing N N 185 ILE CD1 HD13 sing N N 186 ILE OXT HXT sing N N 187 LEU N CA sing N N 188 LEU N H sing N N 189 LEU N H2 sing N N 190 LEU CA C sing N N 191 LEU CA CB sing N N 192 LEU CA HA sing N N 193 LEU C O doub N N 194 LEU C OXT sing N N 195 LEU CB CG sing N N 196 LEU CB HB2 sing N N 197 LEU CB HB3 sing N N 198 LEU CG CD1 sing N N 199 LEU CG CD2 sing N N 200 LEU CG HG sing N N 201 LEU CD1 HD11 sing N N 202 LEU CD1 HD12 sing N N 203 LEU CD1 HD13 sing N N 204 LEU CD2 HD21 sing N N 205 LEU CD2 HD22 sing N N 206 LEU CD2 HD23 sing N N 207 LEU OXT HXT sing N N 208 LYS N CA sing N N 209 LYS N H sing N N 210 LYS N H2 sing N N 211 LYS CA C sing N N 212 LYS CA CB sing N N 213 LYS CA HA sing N N 214 LYS C O doub N N 215 LYS C OXT sing N N 216 LYS CB CG sing N N 217 LYS CB HB2 sing N N 218 LYS CB HB3 sing N N 219 LYS CG CD sing N N 220 LYS CG HG2 sing N N 221 LYS CG HG3 sing N N 222 LYS CD CE sing N N 223 LYS CD HD2 sing N N 224 LYS CD HD3 sing N N 225 LYS CE NZ sing N N 226 LYS CE HE2 sing N N 227 LYS CE HE3 sing N N 228 LYS NZ HZ1 sing N N 229 LYS NZ HZ2 sing N N 230 LYS NZ HZ3 sing N N 231 LYS OXT HXT sing N N 232 MET N CA sing N N 233 MET N H sing N N 234 MET N H2 sing N N 235 MET CA C sing N N 236 MET CA CB sing N N 237 MET CA HA sing N N 238 MET C O doub N N 239 MET C OXT sing N N 240 MET CB CG sing N N 241 MET CB HB2 sing N N 242 MET CB HB3 sing N N 243 MET CG SD sing N N 244 MET CG HG2 sing N N 245 MET CG HG3 sing N N 246 MET SD CE sing N N 247 MET CE HE1 sing N N 248 MET CE HE2 sing N N 249 MET CE HE3 sing N N 250 MET OXT HXT sing N N 251 PHE N CA sing N N 252 PHE N H sing N N 253 PHE N H2 sing N N 254 PHE CA C sing N N 255 PHE CA CB sing N N 256 PHE CA HA sing N N 257 PHE C O doub N N 258 PHE C OXT sing N N 259 PHE CB CG sing N N 260 PHE CB HB2 sing N N 261 PHE CB HB3 sing N N 262 PHE CG CD1 doub Y N 263 PHE CG CD2 sing Y N 264 PHE CD1 CE1 sing Y N 265 PHE CD1 HD1 sing N N 266 PHE CD2 CE2 doub Y N 267 PHE CD2 HD2 sing N N 268 PHE CE1 CZ doub Y N 269 PHE CE1 HE1 sing N N 270 PHE CE2 CZ sing Y N 271 PHE CE2 HE2 sing N N 272 PHE CZ HZ sing N N 273 PHE OXT HXT sing N N 274 PRO N CA sing N N 275 PRO N CD sing N N 276 PRO N H sing N N 277 PRO CA C sing N N 278 PRO CA CB sing N N 279 PRO CA HA sing N N 280 PRO C O doub N N 281 PRO C OXT sing N N 282 PRO CB CG sing N N 283 PRO CB HB2 sing N N 284 PRO CB HB3 sing N N 285 PRO CG CD sing N N 286 PRO CG HG2 sing N N 287 PRO CG HG3 sing N N 288 PRO CD HD2 sing N N 289 PRO CD HD3 sing N N 290 PRO OXT HXT sing N N 291 SER N CA sing N N 292 SER N H sing N N 293 SER N H2 sing N N 294 SER CA C sing N N 295 SER CA CB sing N N 296 SER CA HA sing N N 297 SER C O doub N N 298 SER C OXT sing N N 299 SER CB OG sing N N 300 SER CB HB2 sing N N 301 SER CB HB3 sing N N 302 SER OG HG sing N N 303 SER OXT HXT sing N N 304 THR N CA sing N N 305 THR N H sing N N 306 THR N H2 sing N N 307 THR CA C sing N N 308 THR CA CB sing N N 309 THR CA HA sing N N 310 THR C O doub N N 311 THR C OXT sing N N 312 THR CB OG1 sing N N 313 THR CB CG2 sing N N 314 THR CB HB sing N N 315 THR OG1 HG1 sing N N 316 THR CG2 HG21 sing N N 317 THR CG2 HG22 sing N N 318 THR CG2 HG23 sing N N 319 THR OXT HXT sing N N 320 TRP N CA sing N N 321 TRP N H sing N N 322 TRP N H2 sing N N 323 TRP CA C sing N N 324 TRP CA CB sing N N 325 TRP CA HA sing N N 326 TRP C O doub N N 327 TRP C OXT sing N N 328 TRP CB CG sing N N 329 TRP CB HB2 sing N N 330 TRP CB HB3 sing N N 331 TRP CG CD1 doub Y N 332 TRP CG CD2 sing Y N 333 TRP CD1 NE1 sing Y N 334 TRP CD1 HD1 sing N N 335 TRP CD2 CE2 doub Y N 336 TRP CD2 CE3 sing Y N 337 TRP NE1 CE2 sing Y N 338 TRP NE1 HE1 sing N N 339 TRP CE2 CZ2 sing Y N 340 TRP CE3 CZ3 doub Y N 341 TRP CE3 HE3 sing N N 342 TRP CZ2 CH2 doub Y N 343 TRP CZ2 HZ2 sing N N 344 TRP CZ3 CH2 sing Y N 345 TRP CZ3 HZ3 sing N N 346 TRP CH2 HH2 sing N N 347 TRP OXT HXT sing N N 348 TYR N CA sing N N 349 TYR N H sing N N 350 TYR N H2 sing N N 351 TYR CA C sing N N 352 TYR CA CB sing N N 353 TYR CA HA sing N N 354 TYR C O doub N N 355 TYR C OXT sing N N 356 TYR CB CG sing N N 357 TYR CB HB2 sing N N 358 TYR CB HB3 sing N N 359 TYR CG CD1 doub Y N 360 TYR CG CD2 sing Y N 361 TYR CD1 CE1 sing Y N 362 TYR CD1 HD1 sing N N 363 TYR CD2 CE2 doub Y N 364 TYR CD2 HD2 sing N N 365 TYR CE1 CZ doub Y N 366 TYR CE1 HE1 sing N N 367 TYR CE2 CZ sing Y N 368 TYR CE2 HE2 sing N N 369 TYR CZ OH sing N N 370 TYR OH HH sing N N 371 TYR OXT HXT sing N N 372 VAL N CA sing N N 373 VAL N H sing N N 374 VAL N H2 sing N N 375 VAL CA C sing N N 376 VAL CA CB sing N N 377 VAL CA HA sing N N 378 VAL C O doub N N 379 VAL C OXT sing N N 380 VAL CB CG1 sing N N 381 VAL CB CG2 sing N N 382 VAL CB HB sing N N 383 VAL CG1 HG11 sing N N 384 VAL CG1 HG12 sing N N 385 VAL CG1 HG13 sing N N 386 VAL CG2 HG21 sing N N 387 VAL CG2 HG22 sing N N 388 VAL CG2 HG23 sing N N 389 VAL OXT HXT sing N N 390 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Wellcome Trust' 'United Kingdom' 106244/Z/14/Z 1 'Medical Research Council (United Kingdom)' 'United Kingdom' MR/N002679/1 2 'Biotechnology and Biological Sciences Research Council' 'United Kingdom' BB/S50676X/1 3 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id AKG _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id AKG _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4JHT _pdbx_initial_refinement_model.details ? # _pdbx_serial_crystallography_measurement.diffrn_id 1 _pdbx_serial_crystallography_measurement.pulse_energy ? _pdbx_serial_crystallography_measurement.pulse_duration ? _pdbx_serial_crystallography_measurement.xfel_pulse_repetition_rate ? _pdbx_serial_crystallography_measurement.pulse_photon_energy ? _pdbx_serial_crystallography_measurement.photons_per_pulse ? _pdbx_serial_crystallography_measurement.source_size 49 _pdbx_serial_crystallography_measurement.source_distance ? _pdbx_serial_crystallography_measurement.focal_spot_size ? _pdbx_serial_crystallography_measurement.collimation 'KB mirrors' _pdbx_serial_crystallography_measurement.collection_time_total ? # _pdbx_serial_crystallography_sample_delivery.diffrn_id 1 _pdbx_serial_crystallography_sample_delivery.description 'fixed target' _pdbx_serial_crystallography_sample_delivery.method 'fixed target' # _pdbx_serial_crystallography_sample_delivery_fixed_target.diffrn_id 1 _pdbx_serial_crystallography_sample_delivery_fixed_target.description 'FixedTarget Chip' _pdbx_serial_crystallography_sample_delivery_fixed_target.sample_holding ? _pdbx_serial_crystallography_sample_delivery_fixed_target.support_base ? _pdbx_serial_crystallography_sample_delivery_fixed_target.sample_unit_size ? _pdbx_serial_crystallography_sample_delivery_fixed_target.crystals_per_unit ? _pdbx_serial_crystallography_sample_delivery_fixed_target.sample_solvent ? _pdbx_serial_crystallography_sample_delivery_fixed_target.sample_dehydration_prevention ? _pdbx_serial_crystallography_sample_delivery_fixed_target.motion_control ? _pdbx_serial_crystallography_sample_delivery_fixed_target.velocity_horizontal ? _pdbx_serial_crystallography_sample_delivery_fixed_target.velocity_vertical ? _pdbx_serial_crystallography_sample_delivery_fixed_target.details ? # _space_group.name_H-M_alt 'P 1' _space_group.name_Hall 'P 1' _space_group.IT_number 1 _space_group.crystal_system triclinic _space_group.id 1 # _atom_sites.entry_id 6YPV _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.027000 _atom_sites.fract_transf_matrix[1][2] -0.011734 _atom_sites.fract_transf_matrix[1][3] -0.005310 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.027881 _atom_sites.fract_transf_matrix[2][3] -0.003452 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025411 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? FE ? ? 20.90327 4.99816 ? ? 2.55100 38.46870 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.51345 0.48472 ? ? 24.73122 6.32584 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_