data_6YW3 # _entry.id 6YW3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6YW3 pdb_00006yw3 10.2210/pdb6yw3/pdb WWPDB D_1292108413 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-12-30 2 'Structure model' 1 1 2024-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6YW3 _pdbx_database_status.recvd_initial_deposition_date 2020-04-29 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 5L9B unspecified PDB . 5L9R unspecified PDB . 5L9V unspecified PDB . 6YW1 unspecified PDB . 6YW2 unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Chowdhury, R.' 1 0000-0002-8058-6149 'Schofield, C.J.' 2 ? # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? UK ? ? primary 'Sci Rep' ? ? 2045-2322 ? ? 10 ? 21964 21964 'Use of cyclic peptides to induce crystallization: case study with prolyl hydroxylase domain 2.' 2020 ? 10.1038/s41598-020-76307-8 33319810 ? ? ? ? ? ? ? ? UK ? ? 1 'Nat Commun' ? ? 2041-1723 ? ? 7 ? 12673 ? 'Structural basis for oxygen degradation domain selectivity of the HIF prolyl hydroxylases.' 2016 ? 10.1038/ncomms12673 ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chowdhury, R.' 1 ? primary 'Abboud, M.I.' 2 ? primary 'McAllister, T.E.' 3 ? primary 'Banerji, B.' 4 ? primary 'Bhushan, B.' 5 ? primary 'Sorensen, J.L.' 6 ? primary 'Kawamura, A.' 7 ? primary 'Schofield, C.J.' 8 ? 1 'Chowdhury, R.' 9 ? 1 'Leung, I.K.' 10 ? 1 'Tian, Y.M.' 11 ? 1 'Abboud, M.I.' 12 ? 1 'Ge, W.' 13 ? 1 'Domene, C.' 14 ? 1 'Cantrelle, F.X.' 15 ? 1 'Landrieu, I.' 16 ? 1 'Hardy, A.P.' 17 ? 1 'Pugh, C.W.' 18 ? 1 'Ratcliffe, P.J.' 19 ? 1 'Claridge, T.D.' 20 ? 1 'Schofield, C.J.' 21 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Egl nine homolog 1' 26036.582 1 1.14.11.29 ? ? 'CATALYTIC DOMAIN (RESIDUES 181-407)' 2 polymer syn 'PHD2-SPECIFIC RaPID CYCLIC PEPTIDE 3C (14-MER)' 1801.050 1 ? ? ? ? 3 polymer syn 'Hypoxia-inducible factor 1-alpha' 2254.532 1 ? ? ? ? 4 non-polymer syn 'MANGANESE (II) ION' 54.938 1 ? ? ? ? 5 non-polymer syn N-OXALYLGLYCINE 147.086 1 ? ? ? ? 6 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 7 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 8 water nat water 18.015 116 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Hypoxia-inducible factor prolyl hydroxylase 2,HPH-2,Prolyl hydroxylase domain-containing protein 2,PHD2,SM-20' 3 ;HIF1-alpha,ARNT-interacting protein,Basic-helix-loop-helix-PAS protein MOP1,Class E basic helix-loop-helix protein 78,bHLHe78,Member of PAS protein 1,PAS domain-containing protein 8 ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSHMASPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGD KITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDW DAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGE ; ;GSHMASPNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGD KITWIEGKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDW DAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGE ; A ? 2 'polypeptide(L)' no yes '(48V)(DTY)VWLTDTWVLSRT' XYVWLTDTWVLSRT B ? 3 'polypeptide(L)' no no DLDLEMLAPYIPMDDDFQL DLDLEMLAPYIPMDDDFQL S ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'MANGANESE (II) ION' MN 5 N-OXALYLGLYCINE OGA 6 GLYCEROL GOL 7 'SULFATE ION' SO4 8 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 ALA n 1 6 SER n 1 7 PRO n 1 8 ASN n 1 9 GLY n 1 10 GLN n 1 11 THR n 1 12 LYS n 1 13 PRO n 1 14 LEU n 1 15 PRO n 1 16 ALA n 1 17 LEU n 1 18 LYS n 1 19 LEU n 1 20 ALA n 1 21 LEU n 1 22 GLU n 1 23 TYR n 1 24 ILE n 1 25 VAL n 1 26 PRO n 1 27 CYS n 1 28 MET n 1 29 ASN n 1 30 LYS n 1 31 HIS n 1 32 GLY n 1 33 ILE n 1 34 CYS n 1 35 VAL n 1 36 VAL n 1 37 ASP n 1 38 ASP n 1 39 PHE n 1 40 LEU n 1 41 GLY n 1 42 LYS n 1 43 GLU n 1 44 THR n 1 45 GLY n 1 46 GLN n 1 47 GLN n 1 48 ILE n 1 49 GLY n 1 50 ASP n 1 51 GLU n 1 52 VAL n 1 53 ARG n 1 54 ALA n 1 55 LEU n 1 56 HIS n 1 57 ASP n 1 58 THR n 1 59 GLY n 1 60 LYS n 1 61 PHE n 1 62 THR n 1 63 ASP n 1 64 GLY n 1 65 GLN n 1 66 LEU n 1 67 VAL n 1 68 SER n 1 69 GLN n 1 70 LYS n 1 71 SER n 1 72 ASP n 1 73 SER n 1 74 SER n 1 75 LYS n 1 76 ASP n 1 77 ILE n 1 78 ARG n 1 79 GLY n 1 80 ASP n 1 81 LYS n 1 82 ILE n 1 83 THR n 1 84 TRP n 1 85 ILE n 1 86 GLU n 1 87 GLY n 1 88 LYS n 1 89 GLU n 1 90 PRO n 1 91 GLY n 1 92 CYS n 1 93 GLU n 1 94 THR n 1 95 ILE n 1 96 GLY n 1 97 LEU n 1 98 LEU n 1 99 MET n 1 100 SER n 1 101 SER n 1 102 MET n 1 103 ASP n 1 104 ASP n 1 105 LEU n 1 106 ILE n 1 107 ARG n 1 108 HIS n 1 109 CYS n 1 110 ASN n 1 111 GLY n 1 112 LYS n 1 113 LEU n 1 114 GLY n 1 115 SER n 1 116 TYR n 1 117 LYS n 1 118 ILE n 1 119 ASN n 1 120 GLY n 1 121 ARG n 1 122 THR n 1 123 LYS n 1 124 ALA n 1 125 MET n 1 126 VAL n 1 127 ALA n 1 128 CYS n 1 129 TYR n 1 130 PRO n 1 131 GLY n 1 132 ASN n 1 133 GLY n 1 134 THR n 1 135 GLY n 1 136 TYR n 1 137 VAL n 1 138 ARG n 1 139 HIS n 1 140 VAL n 1 141 ASP n 1 142 ASN n 1 143 PRO n 1 144 ASN n 1 145 GLY n 1 146 ASP n 1 147 GLY n 1 148 ARG n 1 149 CYS n 1 150 VAL n 1 151 THR n 1 152 CYS n 1 153 ILE n 1 154 TYR n 1 155 TYR n 1 156 LEU n 1 157 ASN n 1 158 LYS n 1 159 ASP n 1 160 TRP n 1 161 ASP n 1 162 ALA n 1 163 LYS n 1 164 VAL n 1 165 SER n 1 166 GLY n 1 167 GLY n 1 168 ILE n 1 169 LEU n 1 170 ARG n 1 171 ILE n 1 172 PHE n 1 173 PRO n 1 174 GLU n 1 175 GLY n 1 176 LYS n 1 177 ALA n 1 178 GLN n 1 179 PHE n 1 180 ALA n 1 181 ASP n 1 182 ILE n 1 183 GLU n 1 184 PRO n 1 185 LYS n 1 186 PHE n 1 187 ASP n 1 188 ARG n 1 189 LEU n 1 190 LEU n 1 191 PHE n 1 192 PHE n 1 193 TRP n 1 194 SER n 1 195 ASP n 1 196 ARG n 1 197 ARG n 1 198 ASN n 1 199 PRO n 1 200 HIS n 1 201 GLU n 1 202 VAL n 1 203 GLN n 1 204 PRO n 1 205 ALA n 1 206 TYR n 1 207 ALA n 1 208 THR n 1 209 ARG n 1 210 TYR n 1 211 ALA n 1 212 ILE n 1 213 THR n 1 214 VAL n 1 215 TRP n 1 216 TYR n 1 217 PHE n 1 218 ASP n 1 219 ALA n 1 220 ASP n 1 221 GLU n 1 222 ARG n 1 223 ALA n 1 224 ARG n 1 225 ALA n 1 226 LYS n 1 227 VAL n 1 228 LYS n 1 229 TYR n 1 230 LEU n 1 231 THR n 1 232 GLY n 1 233 GLU n 2 1 48V n 2 2 DTY n 2 3 VAL n 2 4 TRP n 2 5 LEU n 2 6 THR n 2 7 ASP n 2 8 THR n 2 9 TRP n 2 10 VAL n 2 11 LEU n 2 12 SER n 2 13 ARG n 2 14 THR n 3 1 ASP n 3 2 LEU n 3 3 ASP n 3 4 LEU n 3 5 GLU n 3 6 MET n 3 7 LEU n 3 8 ALA n 3 9 PRO n 3 10 TYR n 3 11 ILE n 3 12 PRO n 3 13 MET n 3 14 ASP n 3 15 ASP n 3 16 ASP n 3 17 PHE n 3 18 GLN n 3 19 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 233 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'EGLN1, C1orf12, PNAS-118, PNAS-137' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'PET28A(+)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 14 'synthetic construct' ? 32630 ? 3 1 sample 1 19 'Homo sapiens' Human 9606 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 48V peptide-like . '{[(2R)-2,3-diamino-3-oxopropyl]sulfanyl}acetic acid' ? 'C5 H10 N2 O3 S' 178.209 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DTY 'D-peptide linking' . D-TYROSINE ? 'C9 H11 N O3' 181.189 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 OGA non-polymer . N-OXALYLGLYCINE ? 'C4 H5 N O5' 147.086 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 175 ? ? ? A . n A 1 2 SER 2 176 ? ? ? A . n A 1 3 HIS 3 177 ? ? ? A . n A 1 4 MET 4 178 ? ? ? A . n A 1 5 ALA 5 179 ? ? ? A . n A 1 6 SER 6 180 ? ? ? A . n A 1 7 PRO 7 181 ? ? ? A . n A 1 8 ASN 8 182 ? ? ? A . n A 1 9 GLY 9 183 ? ? ? A . n A 1 10 GLN 10 184 ? ? ? A . n A 1 11 THR 11 185 185 THR GLY A . n A 1 12 LYS 12 186 186 LYS LYS A . n A 1 13 PRO 13 187 187 PRO PRO A . n A 1 14 LEU 14 188 188 LEU LEU A . n A 1 15 PRO 15 189 189 PRO PRO A . n A 1 16 ALA 16 190 190 ALA ALA A . n A 1 17 LEU 17 191 191 LEU LEU A . n A 1 18 LYS 18 192 192 LYS LYS A . n A 1 19 LEU 19 193 193 LEU LEU A . n A 1 20 ALA 20 194 194 ALA ALA A . n A 1 21 LEU 21 195 195 LEU LEU A . n A 1 22 GLU 22 196 196 GLU GLU A . n A 1 23 TYR 23 197 197 TYR TYR A . n A 1 24 ILE 24 198 198 ILE ILE A . n A 1 25 VAL 25 199 199 VAL VAL A . n A 1 26 PRO 26 200 200 PRO PRO A . n A 1 27 CYS 27 201 201 CYS CYS A . n A 1 28 MET 28 202 202 MET MET A . n A 1 29 ASN 29 203 203 ASN ASN A . n A 1 30 LYS 30 204 204 LYS LYS A . n A 1 31 HIS 31 205 205 HIS HIS A . n A 1 32 GLY 32 206 206 GLY GLY A . n A 1 33 ILE 33 207 207 ILE ILE A . n A 1 34 CYS 34 208 208 CYS CYS A . n A 1 35 VAL 35 209 209 VAL VAL A . n A 1 36 VAL 36 210 210 VAL VAL A . n A 1 37 ASP 37 211 211 ASP ASP A . n A 1 38 ASP 38 212 212 ASP ASP A . n A 1 39 PHE 39 213 213 PHE PHE A . n A 1 40 LEU 40 214 214 LEU LEU A . n A 1 41 GLY 41 215 215 GLY GLY A . n A 1 42 LYS 42 216 216 LYS LYS A . n A 1 43 GLU 43 217 217 GLU GLU A . n A 1 44 THR 44 218 218 THR THR A . n A 1 45 GLY 45 219 219 GLY GLY A . n A 1 46 GLN 46 220 220 GLN GLN A . n A 1 47 GLN 47 221 221 GLN GLN A . n A 1 48 ILE 48 222 222 ILE ILE A . n A 1 49 GLY 49 223 223 GLY GLY A . n A 1 50 ASP 50 224 224 ASP ASP A . n A 1 51 GLU 51 225 225 GLU GLU A . n A 1 52 VAL 52 226 226 VAL VAL A . n A 1 53 ARG 53 227 227 ARG ARG A . n A 1 54 ALA 54 228 228 ALA ALA A . n A 1 55 LEU 55 229 229 LEU LEU A . n A 1 56 HIS 56 230 230 HIS HIS A . n A 1 57 ASP 57 231 231 ASP ASP A . n A 1 58 THR 58 232 232 THR THR A . n A 1 59 GLY 59 233 233 GLY GLY A . n A 1 60 LYS 60 234 234 LYS LYS A . n A 1 61 PHE 61 235 235 PHE PHE A . n A 1 62 THR 62 236 236 THR THR A . n A 1 63 ASP 63 237 237 ASP ASP A . n A 1 64 GLY 64 238 238 GLY GLY A . n A 1 65 GLN 65 239 239 GLN GLN A . n A 1 66 LEU 66 240 240 LEU LEU A . n A 1 67 VAL 67 241 241 VAL VAL A . n A 1 68 SER 68 242 242 SER SER A . n A 1 69 GLN 69 243 243 GLN GLN A . n A 1 70 LYS 70 244 244 LYS LYS A . n A 1 71 SER 71 245 245 SER SER A . n A 1 72 ASP 72 246 246 ASP ASP A . n A 1 73 SER 73 247 247 SER SER A . n A 1 74 SER 74 248 248 SER SER A . n A 1 75 LYS 75 249 249 LYS LYS A . n A 1 76 ASP 76 250 250 ASP ASP A . n A 1 77 ILE 77 251 251 ILE ILE A . n A 1 78 ARG 78 252 252 ARG ARG A . n A 1 79 GLY 79 253 253 GLY GLY A . n A 1 80 ASP 80 254 254 ASP ASP A . n A 1 81 LYS 81 255 255 LYS LYS A . n A 1 82 ILE 82 256 256 ILE ILE A . n A 1 83 THR 83 257 257 THR THR A . n A 1 84 TRP 84 258 258 TRP TRP A . n A 1 85 ILE 85 259 259 ILE ILE A . n A 1 86 GLU 86 260 260 GLU GLU A . n A 1 87 GLY 87 261 261 GLY GLY A . n A 1 88 LYS 88 262 262 LYS LYS A . n A 1 89 GLU 89 263 263 GLU GLU A . n A 1 90 PRO 90 264 264 PRO PRO A . n A 1 91 GLY 91 265 265 GLY GLY A . n A 1 92 CYS 92 266 266 CYS CYS A . n A 1 93 GLU 93 267 267 GLU GLU A . n A 1 94 THR 94 268 268 THR THR A . n A 1 95 ILE 95 269 269 ILE ILE A . n A 1 96 GLY 96 270 270 GLY GLY A . n A 1 97 LEU 97 271 271 LEU LEU A . n A 1 98 LEU 98 272 272 LEU LEU A . n A 1 99 MET 99 273 273 MET MET A . n A 1 100 SER 100 274 274 SER SER A . n A 1 101 SER 101 275 275 SER SER A . n A 1 102 MET 102 276 276 MET MET A . n A 1 103 ASP 103 277 277 ASP ASP A . n A 1 104 ASP 104 278 278 ASP ASP A . n A 1 105 LEU 105 279 279 LEU LEU A . n A 1 106 ILE 106 280 280 ILE ILE A . n A 1 107 ARG 107 281 281 ARG ARG A . n A 1 108 HIS 108 282 282 HIS HIS A . n A 1 109 CYS 109 283 283 CYS CYS A . n A 1 110 ASN 110 284 284 ASN ASN A . n A 1 111 GLY 111 285 285 GLY GLY A . n A 1 112 LYS 112 286 286 LYS LYS A . n A 1 113 LEU 113 287 287 LEU LEU A . n A 1 114 GLY 114 288 288 GLY GLY A . n A 1 115 SER 115 289 289 SER SER A . n A 1 116 TYR 116 290 290 TYR TYR A . n A 1 117 LYS 117 291 291 LYS LYS A . n A 1 118 ILE 118 292 292 ILE ILE A . n A 1 119 ASN 119 293 293 ASN ASN A . n A 1 120 GLY 120 294 294 GLY GLY A . n A 1 121 ARG 121 295 295 ARG ARG A . n A 1 122 THR 122 296 296 THR THR A . n A 1 123 LYS 123 297 297 LYS LYS A . n A 1 124 ALA 124 298 298 ALA ALA A . n A 1 125 MET 125 299 299 MET MET A . n A 1 126 VAL 126 300 300 VAL VAL A . n A 1 127 ALA 127 301 301 ALA ALA A . n A 1 128 CYS 128 302 302 CYS CYS A . n A 1 129 TYR 129 303 303 TYR TYR A . n A 1 130 PRO 130 304 304 PRO PRO A . n A 1 131 GLY 131 305 305 GLY GLY A . n A 1 132 ASN 132 306 306 ASN ASN A . n A 1 133 GLY 133 307 307 GLY GLY A . n A 1 134 THR 134 308 308 THR THR A . n A 1 135 GLY 135 309 309 GLY GLY A . n A 1 136 TYR 136 310 310 TYR TYR A . n A 1 137 VAL 137 311 311 VAL VAL A . n A 1 138 ARG 138 312 312 ARG ARG A . n A 1 139 HIS 139 313 313 HIS HIS A . n A 1 140 VAL 140 314 314 VAL VAL A . n A 1 141 ASP 141 315 315 ASP ASP A . n A 1 142 ASN 142 316 316 ASN ASN A . n A 1 143 PRO 143 317 317 PRO PRO A . n A 1 144 ASN 144 318 318 ASN ASN A . n A 1 145 GLY 145 319 319 GLY GLY A . n A 1 146 ASP 146 320 320 ASP ASP A . n A 1 147 GLY 147 321 321 GLY GLY A . n A 1 148 ARG 148 322 322 ARG ARG A . n A 1 149 CYS 149 323 323 CYS CYS A . n A 1 150 VAL 150 324 324 VAL VAL A . n A 1 151 THR 151 325 325 THR THR A . n A 1 152 CYS 152 326 326 CYS CYS A . n A 1 153 ILE 153 327 327 ILE ILE A . n A 1 154 TYR 154 328 328 TYR TYR A . n A 1 155 TYR 155 329 329 TYR TYR A . n A 1 156 LEU 156 330 330 LEU LEU A . n A 1 157 ASN 157 331 331 ASN ASN A . n A 1 158 LYS 158 332 332 LYS LYS A . n A 1 159 ASP 159 333 333 ASP ASP A . n A 1 160 TRP 160 334 334 TRP TRP A . n A 1 161 ASP 161 335 335 ASP ASP A . n A 1 162 ALA 162 336 336 ALA ALA A . n A 1 163 LYS 163 337 337 LYS LYS A . n A 1 164 VAL 164 338 338 VAL VAL A . n A 1 165 SER 165 339 339 SER SER A . n A 1 166 GLY 166 340 340 GLY GLY A . n A 1 167 GLY 167 341 341 GLY GLY A . n A 1 168 ILE 168 342 342 ILE ILE A . n A 1 169 LEU 169 343 343 LEU LEU A . n A 1 170 ARG 170 344 344 ARG ARG A . n A 1 171 ILE 171 345 345 ILE ILE A . n A 1 172 PHE 172 346 346 PHE PHE A . n A 1 173 PRO 173 347 347 PRO PRO A . n A 1 174 GLU 174 348 348 GLU GLU A . n A 1 175 GLY 175 349 349 GLY GLY A . n A 1 176 LYS 176 350 350 LYS LYS A . n A 1 177 ALA 177 351 351 ALA ALA A . n A 1 178 GLN 178 352 352 GLN GLN A . n A 1 179 PHE 179 353 353 PHE PHE A . n A 1 180 ALA 180 354 354 ALA ALA A . n A 1 181 ASP 181 355 355 ASP ASP A . n A 1 182 ILE 182 356 356 ILE ILE A . n A 1 183 GLU 183 357 357 GLU GLU A . n A 1 184 PRO 184 358 358 PRO PRO A . n A 1 185 LYS 185 359 359 LYS LYS A . n A 1 186 PHE 186 360 360 PHE PHE A . n A 1 187 ASP 187 361 361 ASP ASP A . n A 1 188 ARG 188 362 362 ARG ARG A . n A 1 189 LEU 189 363 363 LEU LEU A . n A 1 190 LEU 190 364 364 LEU LEU A . n A 1 191 PHE 191 365 365 PHE PHE A . n A 1 192 PHE 192 366 366 PHE PHE A . n A 1 193 TRP 193 367 367 TRP TRP A . n A 1 194 SER 194 368 368 SER SER A . n A 1 195 ASP 195 369 369 ASP ASP A . n A 1 196 ARG 196 370 370 ARG ARG A . n A 1 197 ARG 197 371 371 ARG ARG A . n A 1 198 ASN 198 372 372 ASN ASN A . n A 1 199 PRO 199 373 373 PRO PRO A . n A 1 200 HIS 200 374 374 HIS HIS A . n A 1 201 GLU 201 375 375 GLU GLU A . n A 1 202 VAL 202 376 376 VAL VAL A . n A 1 203 GLN 203 377 377 GLN GLN A . n A 1 204 PRO 204 378 378 PRO PRO A . n A 1 205 ALA 205 379 379 ALA ALA A . n A 1 206 TYR 206 380 380 TYR TYR A . n A 1 207 ALA 207 381 381 ALA ALA A . n A 1 208 THR 208 382 382 THR THR A . n A 1 209 ARG 209 383 383 ARG ARG A . n A 1 210 TYR 210 384 384 TYR TYR A . n A 1 211 ALA 211 385 385 ALA ALA A . n A 1 212 ILE 212 386 386 ILE ILE A . n A 1 213 THR 213 387 387 THR THR A . n A 1 214 VAL 214 388 388 VAL VAL A . n A 1 215 TRP 215 389 389 TRP TRP A . n A 1 216 TYR 216 390 390 TYR TYR A . n A 1 217 PHE 217 391 391 PHE PHE A . n A 1 218 ASP 218 392 392 ASP ASP A . n A 1 219 ALA 219 393 393 ALA ALA A . n A 1 220 ASP 220 394 394 ASP ASP A . n A 1 221 GLU 221 395 395 GLU GLU A . n A 1 222 ARG 222 396 396 ARG ARG A . n A 1 223 ALA 223 397 397 ALA ALA A . n A 1 224 ARG 224 398 398 ARG ARG A . n A 1 225 ALA 225 399 399 ALA ALA A . n A 1 226 LYS 226 400 400 LYS LYS A . n A 1 227 VAL 227 401 401 VAL VAL A . n A 1 228 LYS 228 402 402 LYS LYS A . n A 1 229 TYR 229 403 403 TYR TYR A . n A 1 230 LEU 230 404 404 LEU LEU A . n A 1 231 THR 231 405 405 THR THR A . n A 1 232 GLY 232 406 406 GLY GLY A . n A 1 233 GLU 233 407 407 GLU GLU A . n B 2 1 48V 1 0 0 48V 48V B . n B 2 2 DTY 2 1 1 DTY DTY B . n B 2 3 VAL 3 2 2 VAL VAL B . n B 2 4 TRP 4 3 3 TRP TRP B . n B 2 5 LEU 5 4 4 LEU LEU B . n B 2 6 THR 6 5 5 THR THR B . n B 2 7 ASP 7 6 6 ASP ASP B . n B 2 8 THR 8 7 7 THR THR B . n B 2 9 TRP 9 8 8 TRP TRP B . n B 2 10 VAL 10 9 9 VAL VAL B . n B 2 11 LEU 11 10 10 LEU LEU B . n B 2 12 SER 12 11 11 SER SER B . n B 2 13 ARG 13 12 12 ARG ARG B . n B 2 14 THR 14 13 13 THR THR B . n C 3 1 ASP 1 556 ? ? ? S . n C 3 2 LEU 2 557 ? ? ? S . n C 3 3 ASP 3 558 558 ASP ASP S . n C 3 4 LEU 4 559 559 LEU LEU S . n C 3 5 GLU 5 560 560 GLU GLU S . n C 3 6 MET 6 561 561 MET MET S . n C 3 7 LEU 7 562 562 LEU LEU S . n C 3 8 ALA 8 563 563 ALA ALA S . n C 3 9 PRO 9 564 564 PRO PRO S . n C 3 10 TYR 10 565 565 TYR TYR S . n C 3 11 ILE 11 566 566 ILE ILE S . n C 3 12 PRO 12 567 567 PRO PRO S . n C 3 13 MET 13 568 568 MET MET S . n C 3 14 ASP 14 569 569 ASP ASP S . n C 3 15 ASP 15 570 570 ASP ASP S . n C 3 16 ASP 16 571 571 ASP ASP S . n C 3 17 PHE 17 572 572 PHE PHE S . n C 3 18 GLN 18 573 573 GLN GLN S . n C 3 19 LEU 19 574 574 LEU LEU S . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MN 1 501 501 MN MN A . E 5 OGA 1 502 601 OGA OGA A . F 6 GOL 1 503 701 GOL GOL A . G 7 SO4 1 504 801 SO4 SO4 A . H 8 HOH 1 601 114 HOH HOH A . H 8 HOH 2 602 6 HOH HOH A . H 8 HOH 3 603 26 HOH HOH A . H 8 HOH 4 604 112 HOH HOH A . H 8 HOH 5 605 75 HOH HOH A . H 8 HOH 6 606 36 HOH HOH A . H 8 HOH 7 607 63 HOH HOH A . H 8 HOH 8 608 49 HOH HOH A . H 8 HOH 9 609 17 HOH HOH A . H 8 HOH 10 610 65 HOH HOH A . H 8 HOH 11 611 16 HOH HOH A . H 8 HOH 12 612 59 HOH HOH A . H 8 HOH 13 613 35 HOH HOH A . H 8 HOH 14 614 7 HOH HOH A . H 8 HOH 15 615 43 HOH HOH A . H 8 HOH 16 616 66 HOH HOH A . H 8 HOH 17 617 99 HOH HOH A . H 8 HOH 18 618 1 HOH HOH A . H 8 HOH 19 619 56 HOH HOH A . H 8 HOH 20 620 54 HOH HOH A . H 8 HOH 21 621 48 HOH HOH A . H 8 HOH 22 622 70 HOH HOH A . H 8 HOH 23 623 78 HOH HOH A . H 8 HOH 24 624 19 HOH HOH A . H 8 HOH 25 625 80 HOH HOH A . H 8 HOH 26 626 72 HOH HOH A . H 8 HOH 27 627 4 HOH HOH A . H 8 HOH 28 628 45 HOH HOH A . H 8 HOH 29 629 55 HOH HOH A . H 8 HOH 30 630 77 HOH HOH A . H 8 HOH 31 631 91 HOH HOH A . H 8 HOH 32 632 8 HOH HOH A . H 8 HOH 33 633 24 HOH HOH A . H 8 HOH 34 634 79 HOH HOH A . H 8 HOH 35 635 40 HOH HOH A . H 8 HOH 36 636 3 HOH HOH A . H 8 HOH 37 637 29 HOH HOH A . H 8 HOH 38 638 85 HOH HOH A . H 8 HOH 39 639 2 HOH HOH A . H 8 HOH 40 640 111 HOH HOH A . H 8 HOH 41 641 31 HOH HOH A . H 8 HOH 42 642 104 HOH HOH A . H 8 HOH 43 643 90 HOH HOH A . H 8 HOH 44 644 110 HOH HOH A . H 8 HOH 45 645 116 HOH HOH A . H 8 HOH 46 646 101 HOH HOH A . H 8 HOH 47 647 67 HOH HOH A . H 8 HOH 48 648 5 HOH HOH A . H 8 HOH 49 649 86 HOH HOH A . H 8 HOH 50 650 46 HOH HOH A . H 8 HOH 51 651 11 HOH HOH A . H 8 HOH 52 652 18 HOH HOH A . H 8 HOH 53 653 81 HOH HOH A . H 8 HOH 54 654 57 HOH HOH A . H 8 HOH 55 655 13 HOH HOH A . H 8 HOH 56 656 10 HOH HOH A . H 8 HOH 57 657 22 HOH HOH A . H 8 HOH 58 658 84 HOH HOH A . H 8 HOH 59 659 27 HOH HOH A . H 8 HOH 60 660 30 HOH HOH A . H 8 HOH 61 661 73 HOH HOH A . H 8 HOH 62 662 38 HOH HOH A . H 8 HOH 63 663 68 HOH HOH A . H 8 HOH 64 664 96 HOH HOH A . H 8 HOH 65 665 60 HOH HOH A . H 8 HOH 66 666 44 HOH HOH A . H 8 HOH 67 667 103 HOH HOH A . H 8 HOH 68 668 25 HOH HOH A . H 8 HOH 69 669 94 HOH HOH A . H 8 HOH 70 670 89 HOH HOH A . H 8 HOH 71 671 37 HOH HOH A . H 8 HOH 72 672 15 HOH HOH A . H 8 HOH 73 673 34 HOH HOH A . H 8 HOH 74 674 50 HOH HOH A . H 8 HOH 75 675 108 HOH HOH A . H 8 HOH 76 676 42 HOH HOH A . H 8 HOH 77 677 20 HOH HOH A . H 8 HOH 78 678 102 HOH HOH A . H 8 HOH 79 679 41 HOH HOH A . H 8 HOH 80 680 58 HOH HOH A . H 8 HOH 81 681 71 HOH HOH A . H 8 HOH 82 682 76 HOH HOH A . H 8 HOH 83 683 98 HOH HOH A . H 8 HOH 84 684 62 HOH HOH A . H 8 HOH 85 685 69 HOH HOH A . H 8 HOH 86 686 23 HOH HOH A . H 8 HOH 87 687 61 HOH HOH A . H 8 HOH 88 688 107 HOH HOH A . H 8 HOH 89 689 93 HOH HOH A . H 8 HOH 90 690 82 HOH HOH A . H 8 HOH 91 691 115 HOH HOH A . H 8 HOH 92 692 105 HOH HOH A . H 8 HOH 93 693 53 HOH HOH A . H 8 HOH 94 694 95 HOH HOH A . H 8 HOH 95 695 106 HOH HOH A . H 8 HOH 96 696 83 HOH HOH A . H 8 HOH 97 697 100 HOH HOH A . H 8 HOH 98 698 97 HOH HOH A . I 8 HOH 1 101 74 HOH HOH B . I 8 HOH 2 102 14 HOH HOH B . I 8 HOH 3 103 88 HOH HOH B . I 8 HOH 4 104 32 HOH HOH B . I 8 HOH 5 105 28 HOH HOH B . I 8 HOH 6 106 9 HOH HOH B . I 8 HOH 7 107 12 HOH HOH B . I 8 HOH 8 108 52 HOH HOH B . I 8 HOH 9 109 113 HOH HOH B . I 8 HOH 10 110 21 HOH HOH B . I 8 HOH 11 111 33 HOH HOH B . J 8 HOH 1 601 92 HOH HOH S . J 8 HOH 2 602 64 HOH HOH S . J 8 HOH 3 603 39 HOH HOH S . J 8 HOH 4 604 87 HOH HOH S . J 8 HOH 5 605 109 HOH HOH S . J 8 HOH 6 606 47 HOH HOH S . J 8 HOH 7 607 51 HOH HOH S . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A THR 185 ? CB ? A THR 11 CB 2 1 Y 1 A THR 185 ? OG1 ? A THR 11 OG1 3 1 Y 1 A THR 185 ? CG2 ? A THR 11 CG2 4 1 Y 1 A GLU 217 ? CD ? A GLU 43 CD 5 1 Y 1 A GLU 217 ? OE1 ? A GLU 43 OE1 6 1 Y 1 A GLU 217 ? OE2 ? A GLU 43 OE2 7 1 Y 1 A LYS 234 ? CD ? A LYS 60 CD 8 1 Y 1 A LYS 234 ? CE ? A LYS 60 CE 9 1 Y 1 A LYS 234 ? NZ ? A LYS 60 NZ 10 1 Y 1 A LYS 244 ? CG ? A LYS 70 CG 11 1 Y 1 A LYS 244 ? CD ? A LYS 70 CD 12 1 Y 1 A LYS 244 ? CE ? A LYS 70 CE 13 1 Y 1 A LYS 244 ? NZ ? A LYS 70 NZ 14 1 Y 1 A SER 245 ? OG ? A SER 71 OG 15 1 Y 1 A ASP 246 ? CG ? A ASP 72 CG 16 1 Y 1 A ASP 246 ? OD1 ? A ASP 72 OD1 17 1 Y 1 A ASP 246 ? OD2 ? A ASP 72 OD2 18 1 Y 1 A LYS 249 ? NZ ? A LYS 75 NZ 19 1 Y 1 A LYS 255 ? CE ? A LYS 81 CE 20 1 Y 1 A LYS 255 ? NZ ? A LYS 81 NZ 21 1 Y 1 A LYS 262 ? CD ? A LYS 88 CD 22 1 Y 1 A LYS 262 ? CE ? A LYS 88 CE 23 1 Y 1 A LYS 262 ? NZ ? A LYS 88 NZ 24 1 Y 1 A ASN 284 ? CG ? A ASN 110 CG 25 1 Y 1 A ASN 284 ? OD1 ? A ASN 110 OD1 26 1 Y 1 A ASN 284 ? ND2 ? A ASN 110 ND2 27 1 Y 1 A LYS 291 ? CG ? A LYS 117 CG 28 1 Y 1 A LYS 291 ? CD ? A LYS 117 CD 29 1 Y 1 A LYS 291 ? CE ? A LYS 117 CE 30 1 Y 1 A LYS 291 ? NZ ? A LYS 117 NZ 31 1 Y 1 A LYS 332 ? CD ? A LYS 158 CD 32 1 Y 1 A LYS 332 ? CE ? A LYS 158 CE 33 1 Y 1 A LYS 332 ? NZ ? A LYS 158 NZ 34 1 Y 1 A LYS 337 ? CD ? A LYS 163 CD 35 1 Y 1 A LYS 337 ? CE ? A LYS 163 CE 36 1 Y 1 A LYS 337 ? NZ ? A LYS 163 NZ 37 1 Y 1 A GLU 348 ? CD ? A GLU 174 CD 38 1 Y 1 A GLU 348 ? OE1 ? A GLU 174 OE1 39 1 Y 1 A GLU 348 ? OE2 ? A GLU 174 OE2 40 1 Y 1 A LYS 350 ? CD ? A LYS 176 CD 41 1 Y 1 A LYS 350 ? CE ? A LYS 176 CE 42 1 Y 1 A LYS 350 ? NZ ? A LYS 176 NZ 43 1 Y 1 A GLN 352 ? CG ? A GLN 178 CG 44 1 Y 1 A GLN 352 ? CD ? A GLN 178 CD 45 1 Y 1 A GLN 352 ? OE1 ? A GLN 178 OE1 46 1 Y 1 A GLN 352 ? NE2 ? A GLN 178 NE2 47 1 Y 1 A GLU 407 ? CG ? A GLU 233 CG 48 1 Y 1 A GLU 407 ? CD ? A GLU 233 CD 49 1 Y 1 A GLU 407 ? OE1 ? A GLU 233 OE1 50 1 Y 1 A GLU 407 ? OE2 ? A GLU 233 OE2 51 1 Y 1 S GLU 560 ? CG ? C GLU 5 CG 52 1 Y 1 S GLU 560 ? CD ? C GLU 5 CD 53 1 Y 1 S GLU 560 ? OE1 ? C GLU 5 OE1 54 1 Y 1 S GLU 560 ? OE2 ? C GLU 5 OE2 55 1 Y 1 S MET 561 ? CG ? C MET 6 CG 56 1 Y 1 S MET 561 ? SD ? C MET 6 SD 57 1 Y 1 S MET 561 ? CE ? C MET 6 CE # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? 3.3.22 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.14_3260 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DIALS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6YW3 _cell.details ? _cell.formula_units_Z ? _cell.length_a 76.443 _cell.length_a_esd ? _cell.length_b 81.285 _cell.length_b_esd ? _cell.length_c 43.219 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6YW3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6YW3 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.36 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.0 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;Sample: 1.0 mM cPHD2, 1.5 mM MnCl2, 2.0 mM compound, 1.0 mM 3C, 2.0 mM CODD; Reservoir: 19-23% w/v polyethylene glycol 3350, 0.25 M lithium sulfate, 2 mM MnCl2; Sitting drop (2 ul), protein-to-well ratio, 1:1 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details MIRRORS _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-05-08 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'SI 111' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9762 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9762 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate 30.4 _reflns.entry_id 6YW3 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.279 _reflns.d_resolution_low 55.686 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12861 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100.000 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 9.100 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.164 _reflns.pdbx_netI_over_av_sigmaI 4.000 _reflns.pdbx_netI_over_sigmaI 9.600 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.174 _reflns.pdbx_Rpim_I_all 0.056 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.996 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 2.280 2.400 ? 1.77 ? ? ? ? 1830 100.000 ? ? ? ? 1.043 ? ? ? ? ? ? ? ? 9.000 1.043 ? ? ? 1.106 0.362 ? 1 1 0.700 ? ? 2.400 2.550 ? 1.000 ? ? ? ? 1754 100.000 ? ? ? ? 0.764 ? ? ? ? ? ? ? ? 9.600 0.764 ? ? ? 0.807 0.257 ? 2 1 ? ? ? 2.550 2.730 ? 1.400 ? ? ? ? 1629 100.000 ? ? ? ? 0.545 ? ? ? ? ? ? ? ? 9.100 0.545 ? ? ? 0.578 0.189 ? 3 1 ? ? ? 2.730 2.940 ? 2.400 ? ? ? ? 1534 100.000 ? ? ? ? 0.315 ? ? ? ? ? ? ? ? 9.300 0.315 ? ? ? 0.333 0.107 ? 4 1 ? ? ? 2.940 3.220 ? 3.800 ? ? ? ? 1408 100.000 ? ? ? ? 0.200 ? ? ? ? ? ? ? ? 9.300 0.200 ? ? ? 0.212 0.068 ? 5 1 ? ? ? 3.220 3.600 ? 5.900 ? ? ? ? 1305 100.000 ? ? ? ? 0.121 ? ? ? ? ? ? ? ? 9.300 0.121 ? ? ? 0.128 0.041 ? 6 1 ? ? ? 3.600 4.160 ? 7.400 ? ? ? ? 1144 100.000 ? ? ? ? 0.089 ? ? ? ? ? ? ? ? 9.100 0.089 ? ? ? 0.094 0.030 ? 7 1 ? ? ? 4.160 5.100 ? 8.300 ? ? ? ? 995 100.000 ? ? ? ? 0.072 ? ? ? ? ? ? ? ? 9.200 0.072 ? ? ? 0.076 0.024 ? 8 1 ? ? ? 5.100 7.210 ? 7.800 ? ? ? ? 786 100.000 ? ? ? ? 0.076 ? ? ? ? ? ? ? ? 8.400 0.076 ? ? ? 0.081 0.027 ? 9 1 ? ? ? 7.210 76.443 ? 7.100 ? ? ? ? 476 99.900 ? ? ? ? 0.074 ? ? ? ? ? ? ? ? 8.000 0.074 ? ? ? 0.079 0.028 ? 10 1 ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 96.010 _refine.B_iso_mean 36.8484 _refine.B_iso_min 15.180 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6YW3 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.2790 _refine.ls_d_res_low 55.6860 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 12824 _refine.ls_number_reflns_R_free 617 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.8700 _refine.ls_percent_reflns_R_free 4.8100 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1898 _refine.ls_R_factor_R_free 0.2082 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1878 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_bsol 40.2 _refine.solvent_model_param_ksol 0.37 _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.350 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5L9R _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 20.6100 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2400 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.2790 _refine_hist.d_res_low 55.6860 _refine_hist.number_atoms_solvent 116 _refine_hist.number_atoms_total 2118 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 254 _refine_hist.pdbx_B_iso_mean_ligand 31.52 _refine_hist.pdbx_B_iso_mean_solvent 36.31 _refine_hist.pdbx_number_atoms_protein 1969 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 33 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.004 0.045 ? 9529 'X-RAY DIFFRACTION' ? f_angle_d 0.795 6.909 ? 12945 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 16.442 179.960 ? 5500 'X-RAY DIFFRACTION' ? f_chiral_restr 0.048 0.167 ? 1356 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 0.061 ? 1691 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.2792 2.3607 . . 52 1176 99.0000 . . . 0.2721 0.0000 0.2526 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3607 2.4552 . . 65 1181 100.0000 . . . 0.2402 0.0000 0.2439 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4552 2.5669 . . 66 1213 100.0000 . . . 0.2901 0.0000 0.2289 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5669 2.7023 . . 75 1195 100.0000 . . . 0.2338 0.0000 0.2217 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7023 2.8716 . . 64 1191 100.0000 . . . 0.2708 0.0000 0.2132 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8716 3.0933 . . 67 1202 100.0000 . . . 0.1944 0.0000 0.2083 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0933 3.4045 . . 58 1226 100.0000 . . . 0.2430 0.0000 0.1910 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4045 3.8971 . . 62 1224 100.0000 . . . 0.1844 0.0000 0.1695 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.8971 4.9094 . . 58 1255 100.0000 . . . 0.1395 0.0000 0.1315 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.9094 55.6860 . . 50 1345 100.0000 . . . 0.2114 0.0000 0.1863 . . . . . . . . . . . # _struct.entry_id 6YW3 _struct.title ;HIF PROLYL HYDROXYLASE 2 (PHD2/ EGLN1) in complex with N-Oxalyl Glycine (NOG), HIF-1ALPHA CODD (556-574) and a RaPID-derived cyclic peptide 3C (14-mer) ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6YW3 _struct_keywords.text ;OXIDOREDUCTASE, NON-HEME DIOXYGENASE, IRON, 2-OXOGLUTARATE, HYPOXIA-INDUCIBLE FACTOR, HIF, HIF PROLYL HYDROXYLASE DOMAIN 2, PHD2, EGLN1, OXYGENASE, HYPOXIA, DNA-BINDING, METAL-BINDING, TRANSCRIPTION, HELIX-LOOP-HELIX-BETA, DSBH, FACIAL TRIAD, CYTOPLASM, TRANSCRIPTION/EPIGENETIC REGULATION, SIGNALING, DEVELOPMENT, CELL STRUCTURE, BETA-HYDROXYLATION, TRANSCRIPTION ACTIVATOR/INHIBITOR, UBL CONJUGATION, POLYMORPHISM, VITAMIN C, ZINC-FINGER, FAMILIAL ERYTHROCYTOSIS, BREAST CANCER, TRANSCRIPTION COMPLEX ; _struct_keywords.pdbx_keywords OXIDOREDUCTASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 8 ? I N N 8 ? J N N 8 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP EGLN1_HUMAN Q9GZT9 ? 1 ;PNGQTKPLPALKLALEYIVPCMNKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIE GKEPGCETIGLLMSSMDDLIRHCNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSG GILRIFPEGKAQFADIEPKFDRLLFFWSDRRNPHEVQPAYATRYAITVWYFDADERARAKVKYLTGE ; 181 2 PDB 6YW3 6YW3 ? 2 ? 1 3 UNP HIF1A_HUMAN Q16665 ? 3 DLDLEMLAPYIPMDDDFQL 556 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6YW3 A 7 ? 233 ? Q9GZT9 181 ? 407 ? 181 407 2 2 6YW3 B 1 ? 14 ? 6YW3 0 ? 13 ? 0 13 3 3 6YW3 S 1 ? 19 ? Q16665 556 ? 574 ? 556 574 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6YW3 GLY A 1 ? UNP Q9GZT9 ? ? 'expression tag' 175 1 1 6YW3 SER A 2 ? UNP Q9GZT9 ? ? 'expression tag' 176 2 1 6YW3 HIS A 3 ? UNP Q9GZT9 ? ? 'expression tag' 177 3 1 6YW3 MET A 4 ? UNP Q9GZT9 ? ? 'expression tag' 178 4 1 6YW3 ALA A 5 ? UNP Q9GZT9 ? ? 'expression tag' 179 5 1 6YW3 SER A 6 ? UNP Q9GZT9 ? ? 'expression tag' 180 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4690 ? 1 MORE -32 ? 1 'SSA (A^2)' 11570 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 15 ? TYR A 23 ? PRO A 189 TYR A 197 1 ? 9 HELX_P HELX_P2 AA2 TYR A 23 ? GLY A 32 ? TYR A 197 GLY A 206 1 ? 10 HELX_P HELX_P3 AA3 GLY A 41 ? THR A 58 ? GLY A 215 THR A 232 1 ? 18 HELX_P HELX_P4 AA4 SER A 73 ? ILE A 77 ? SER A 247 ILE A 251 5 ? 5 HELX_P HELX_P5 AA5 CYS A 92 ? CYS A 109 ? CYS A 266 CYS A 283 1 ? 18 HELX_P HELX_P6 AA6 ASP A 161 ? GLY A 166 ? ASP A 335 GLY A 340 1 ? 6 HELX_P HELX_P7 AA7 ALA A 219 ? LYS A 226 ? ALA A 393 LYS A 400 1 ? 8 HELX_P HELX_P8 AA8 LEU C 4 ? ALA C 8 ? LEU S 559 ALA S 563 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B 48V 1 C09 ? ? ? 1_555 B DTY 2 N ? ? B 48V 0 B DTY 1 1_555 ? ? ? ? ? ? ? 1.431 ? ? covale2 covale one ? B 48V 1 N01 ? ? ? 1_555 B THR 14 C ? ? B 48V 0 B THR 13 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale3 covale both ? B DTY 2 C ? ? ? 1_555 B VAL 3 N ? ? B DTY 1 B VAL 2 1_555 ? ? ? ? ? ? ? 1.322 ? ? metalc1 metalc ? ? A HIS 139 NE2 ? ? ? 1_555 D MN . MN ? ? A HIS 313 A MN 501 1_555 ? ? ? ? ? ? ? 2.170 ? ? metalc2 metalc ? ? A ASP 141 OD1 ? ? ? 1_555 D MN . MN ? ? A ASP 315 A MN 501 1_555 ? ? ? ? ? ? ? 2.184 ? ? metalc3 metalc ? ? A HIS 200 NE2 ? ? ? 1_555 D MN . MN ? ? A HIS 374 A MN 501 1_555 ? ? ? ? ? ? ? 2.121 ? ? metalc4 metalc ? ? D MN . MN ? ? ? 1_555 E OGA . O1 ? ? A MN 501 A OGA 502 1_555 ? ? ? ? ? ? ? 2.214 ? ? metalc5 metalc ? ? D MN . MN ? ? ? 1_555 E OGA . "O2'" ? ? A MN 501 A OGA 502 1_555 ? ? ? ? ? ? ? 2.128 ? ? metalc6 metalc ? ? D MN . MN ? ? ? 1_555 H HOH . O ? ? A MN 501 A HOH 612 1_555 ? ? ? ? ? ? ? 1.977 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 139 ? A HIS 313 ? 1_555 MN ? D MN . ? A MN 501 ? 1_555 OD1 ? A ASP 141 ? A ASP 315 ? 1_555 86.3 ? 2 NE2 ? A HIS 139 ? A HIS 313 ? 1_555 MN ? D MN . ? A MN 501 ? 1_555 NE2 ? A HIS 200 ? A HIS 374 ? 1_555 90.7 ? 3 OD1 ? A ASP 141 ? A ASP 315 ? 1_555 MN ? D MN . ? A MN 501 ? 1_555 NE2 ? A HIS 200 ? A HIS 374 ? 1_555 89.3 ? 4 NE2 ? A HIS 139 ? A HIS 313 ? 1_555 MN ? D MN . ? A MN 501 ? 1_555 O1 ? E OGA . ? A OGA 502 ? 1_555 99.1 ? 5 OD1 ? A ASP 141 ? A ASP 315 ? 1_555 MN ? D MN . ? A MN 501 ? 1_555 O1 ? E OGA . ? A OGA 502 ? 1_555 98.2 ? 6 NE2 ? A HIS 200 ? A HIS 374 ? 1_555 MN ? D MN . ? A MN 501 ? 1_555 O1 ? E OGA . ? A OGA 502 ? 1_555 168.0 ? 7 NE2 ? A HIS 139 ? A HIS 313 ? 1_555 MN ? D MN . ? A MN 501 ? 1_555 "O2'" ? E OGA . ? A OGA 502 ? 1_555 103.0 ? 8 OD1 ? A ASP 141 ? A ASP 315 ? 1_555 MN ? D MN . ? A MN 501 ? 1_555 "O2'" ? E OGA . ? A OGA 502 ? 1_555 170.6 ? 9 NE2 ? A HIS 200 ? A HIS 374 ? 1_555 MN ? D MN . ? A MN 501 ? 1_555 "O2'" ? E OGA . ? A OGA 502 ? 1_555 89.5 ? 10 O1 ? E OGA . ? A OGA 502 ? 1_555 MN ? D MN . ? A MN 501 ? 1_555 "O2'" ? E OGA . ? A OGA 502 ? 1_555 81.6 ? 11 NE2 ? A HIS 139 ? A HIS 313 ? 1_555 MN ? D MN . ? A MN 501 ? 1_555 O ? H HOH . ? A HOH 612 ? 1_555 171.8 ? 12 OD1 ? A ASP 141 ? A ASP 315 ? 1_555 MN ? D MN . ? A MN 501 ? 1_555 O ? H HOH . ? A HOH 612 ? 1_555 85.7 ? 13 NE2 ? A HIS 200 ? A HIS 374 ? 1_555 MN ? D MN . ? A MN 501 ? 1_555 O ? H HOH . ? A HOH 612 ? 1_555 87.1 ? 14 O1 ? E OGA . ? A OGA 502 ? 1_555 MN ? D MN . ? A MN 501 ? 1_555 O ? H HOH . ? A HOH 612 ? 1_555 84.1 ? 15 "O2'" ? E OGA . ? A OGA 502 ? 1_555 MN ? D MN . ? A MN 501 ? 1_555 O ? H HOH . ? A HOH 612 ? 1_555 84.9 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 8 ? AA2 ? 6 ? AA3 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 62 ? ASP A 63 ? THR A 236 ASP A 237 AA1 2 LYS A 81 ? ILE A 85 ? LYS A 255 ILE A 259 AA1 3 ALA A 124 ? PRO A 130 ? ALA A 298 PRO A 304 AA1 4 THR A 208 ? ASP A 218 ? THR A 382 ASP A 392 AA1 5 ARG A 148 ? TYR A 155 ? ARG A 322 TYR A 329 AA1 6 LEU A 189 ? TRP A 193 ? LEU A 363 TRP A 367 AA1 7 ILE A 33 ? ASP A 37 ? ILE A 207 ASP A 211 AA1 8 VAL B 10 ? SER B 12 ? VAL B 9 SER B 11 AA2 1 THR A 62 ? ASP A 63 ? THR A 236 ASP A 237 AA2 2 LYS A 81 ? ILE A 85 ? LYS A 255 ILE A 259 AA2 3 ALA A 124 ? PRO A 130 ? ALA A 298 PRO A 304 AA2 4 THR A 208 ? ASP A 218 ? THR A 382 ASP A 392 AA2 5 ILE A 118 ? ARG A 121 ? ILE A 292 ARG A 295 AA2 6 PHE C 17 ? GLN C 18 ? PHE S 572 GLN S 573 AA3 1 THR A 134 ? HIS A 139 ? THR A 308 HIS A 313 AA3 2 HIS A 200 ? ALA A 205 ? HIS A 374 ALA A 379 AA3 3 LEU A 169 ? ILE A 171 ? LEU A 343 ILE A 345 AA3 4 ALA A 180 ? ILE A 182 ? ALA A 354 ILE A 356 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 62 ? N THR A 236 O ILE A 82 ? O ILE A 256 AA1 2 3 N THR A 83 ? N THR A 257 O VAL A 126 ? O VAL A 300 AA1 3 4 N MET A 125 ? N MET A 299 O THR A 213 ? O THR A 387 AA1 4 5 O VAL A 214 ? O VAL A 388 N CYS A 152 ? N CYS A 326 AA1 5 6 N THR A 151 ? N THR A 325 O PHE A 192 ? O PHE A 366 AA1 6 7 O LEU A 189 ? O LEU A 363 N VAL A 36 ? N VAL A 210 AA1 7 8 N ASP A 37 ? N ASP A 211 O LEU B 11 ? O LEU B 10 AA2 1 2 N THR A 62 ? N THR A 236 O ILE A 82 ? O ILE A 256 AA2 2 3 N THR A 83 ? N THR A 257 O VAL A 126 ? O VAL A 300 AA2 3 4 N MET A 125 ? N MET A 299 O THR A 213 ? O THR A 387 AA2 4 5 O PHE A 217 ? O PHE A 391 N GLY A 120 ? N GLY A 294 AA2 5 6 N ARG A 121 ? N ARG A 295 O PHE C 17 ? O PHE S 572 AA3 1 2 N THR A 134 ? N THR A 308 O ALA A 205 ? O ALA A 379 AA3 2 3 O GLU A 201 ? O GLU A 375 N ARG A 170 ? N ARG A 344 AA3 3 4 N ILE A 171 ? N ILE A 345 O ALA A 180 ? O ALA A 354 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MN 501 ? 5 'binding site for residue MN A 501' AC2 Software A OGA 502 ? 13 'binding site for residue OGA A 502' AC3 Software A GOL 503 ? 6 'binding site for residue GOL A 503' AC4 Software A SO4 504 ? 5 'binding site for residue SO4 A 504' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 HIS A 139 ? HIS A 313 . ? 1_555 ? 2 AC1 5 ASP A 141 ? ASP A 315 . ? 1_555 ? 3 AC1 5 HIS A 200 ? HIS A 374 . ? 1_555 ? 4 AC1 5 OGA E . ? OGA A 502 . ? 1_555 ? 5 AC1 5 HOH H . ? HOH A 612 . ? 1_555 ? 6 AC2 13 MET A 125 ? MET A 299 . ? 1_555 ? 7 AC2 13 HIS A 139 ? HIS A 313 . ? 1_555 ? 8 AC2 13 ASP A 141 ? ASP A 315 . ? 1_555 ? 9 AC2 13 TYR A 155 ? TYR A 329 . ? 1_555 ? 10 AC2 13 HIS A 200 ? HIS A 374 . ? 1_555 ? 11 AC2 13 VAL A 202 ? VAL A 376 . ? 1_555 ? 12 AC2 13 ARG A 209 ? ARG A 383 . ? 1_555 ? 13 AC2 13 MN D . ? MN A 501 . ? 1_555 ? 14 AC2 13 HOH H . ? HOH A 602 . ? 1_555 ? 15 AC2 13 HOH H . ? HOH A 612 . ? 1_555 ? 16 AC2 13 HOH H . ? HOH A 614 . ? 1_555 ? 17 AC2 13 HOH H . ? HOH A 630 . ? 1_555 ? 18 AC2 13 PRO C 9 ? PRO S 564 . ? 1_555 ? 19 AC3 6 ASP A 76 ? ASP A 250 . ? 1_555 ? 20 AC3 6 ILE A 77 ? ILE A 251 . ? 1_555 ? 21 AC3 6 THR A 134 ? THR A 308 . ? 1_555 ? 22 AC3 6 GLY A 135 ? GLY A 309 . ? 1_555 ? 23 AC3 6 VAL A 137 ? VAL A 311 . ? 1_555 ? 24 AC3 6 ARG A 170 ? ARG A 344 . ? 2_765 ? 25 AC4 5 GLN A 46 ? GLN A 220 . ? 1_555 ? 26 AC4 5 ASP A 50 ? ASP A 224 . ? 1_555 ? 27 AC4 5 SER A 115 ? SER A 289 . ? 1_556 ? 28 AC4 5 ASP A 218 ? ASP A 392 . ? 1_556 ? 29 AC4 5 ASP A 220 ? ASP A 394 . ? 1_556 ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id TYR _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 197 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -131.53 _pdbx_validate_torsion.psi -62.07 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 79.4642 11.0064 50.0979 0.2960 ? -0.0326 ? 0.0447 ? 0.2611 ? -0.0488 ? 0.3393 ? 2.9125 ? -1.9796 ? 0.9361 ? 3.9287 ? -0.9787 ? 3.1859 ? -0.0089 ? 0.0478 ? -0.5226 ? -0.3510 ? 0.1683 ? 0.5470 ? 0.5638 ? -0.0204 ? -0.0426 ? 2 'X-RAY DIFFRACTION' ? refined 79.9660 17.5862 56.9509 0.2291 ? -0.0568 ? -0.0463 ? 0.1525 ? -0.0001 ? 0.2410 ? 2.8592 ? -0.1159 ? 0.8363 ? 2.7204 ? -1.2055 ? 3.8949 ? 0.1828 ? -0.3198 ? -0.2189 ? -0.0834 ? 0.1329 ? 0.4387 ? 0.1858 ? -0.0285 ? -0.3326 ? 3 'X-RAY DIFFRACTION' ? refined 93.2364 23.3634 70.6847 0.5508 ? -0.0410 ? -0.1491 ? 0.4667 ? 0.0648 ? 0.2396 ? 4.1067 ? 2.7012 ? -0.7797 ? 9.4482 ? 0.5423 ? 1.1454 ? 0.0543 ? -0.0510 ? 0.2510 ? 1.7118 ? -0.0787 ? -0.0790 ? -0.3485 ? 0.5192 ? 0.0950 ? 4 'X-RAY DIFFRACTION' ? refined 96.5050 35.3331 57.6966 0.3273 ? -0.1522 ? -0.0985 ? 0.4064 ? 0.0077 ? 0.4026 ? 5.8639 ? -0.8411 ? 0.4412 ? 2.6634 ? -0.4858 ? 3.8058 ? -0.0915 ? -0.1623 ? 0.6428 ? 0.4049 ? -0.1662 ? -0.3606 ? -0.5689 ? 0.6585 ? 0.2575 ? 5 'X-RAY DIFFRACTION' ? refined 92.8039 14.2720 56.0993 0.2609 ? 0.0442 ? -0.0583 ? 0.2513 ? 0.0255 ? 0.2441 ? 5.1542 ? 0.9688 ? 1.0772 ? 4.5856 ? 2.0818 ? 6.3779 ? 0.2686 ? 0.0048 ? -0.4024 ? 0.4034 ? 0.0312 ? -0.4286 ? 0.7359 ? 0.7526 ? -0.2773 ? 6 'X-RAY DIFFRACTION' ? refined 88.5495 15.5209 41.0071 0.3892 ? 0.0601 ? 0.0265 ? 0.3317 ? -0.0188 ? 0.2787 ? 5.4849 ? 1.3464 ? -0.3522 ? 3.5233 ? 0.2374 ? 3.7869 ? 0.0171 ? 0.5901 ? -0.0407 ? -0.3037 ? 0.0345 ? -0.2844 ? 0.7344 ? 0.1276 ? -0.2038 ? 7 'X-RAY DIFFRACTION' ? refined 92.6170 30.3889 59.0865 0.2549 ? -0.0443 ? -0.0648 ? 0.3458 ? 0.0081 ? 0.2458 ? 2.4379 ? 0.6144 ? 0.6681 ? 1.9559 ? 0.3558 ? 2.7066 ? -0.0250 ? -0.5301 ? 0.4594 ? 0.3134 ? 0.2663 ? -0.5382 ? -0.1922 ? 0.5578 ? -0.1279 ? 8 'X-RAY DIFFRACTION' ? refined 86.4650 35.6705 48.7129 0.2156 ? -0.0818 ? -0.0492 ? 0.1971 ? 0.0504 ? 0.2586 ? 3.6848 ? -1.1903 ? -1.7521 ? 5.2202 ? 1.1263 ? 5.5514 ? -0.0043 ? 0.1575 ? 0.3371 ? -0.1565 ? -0.1464 ? -0.1874 ? -0.6883 ? 0.2408 ? 0.1862 ? 9 'X-RAY DIFFRACTION' ? refined 84.6540 25.5793 59.3780 0.2454 ? -0.0182 ? -0.0411 ? 0.2160 ? 0.0240 ? 0.1981 ? 2.3243 ? -0.5495 ? -0.5531 ? 3.3471 ? 0.7254 ? 3.1600 ? -0.2650 ? 0.0240 ? -0.3492 ? 0.5411 ? -0.3110 ? 0.0038 ? -0.3367 ? -0.0136 ? 0.6041 ? 10 'X-RAY DIFFRACTION' ? refined 75.2295 32.4505 55.8347 0.1781 ? -0.0740 ? -0.0511 ? 0.3295 ? -0.0201 ? 0.2688 ? 2.6392 ? -0.5041 ? -0.6579 ? 2.5041 ? -0.7840 ? 1.9579 ? -0.0257 ? 0.2511 ? -0.1167 ? 0.0515 ? -0.1001 ? 0.1370 ? 0.4472 ? -1.2018 ? 0.2325 ? 11 'X-RAY DIFFRACTION' ? refined 76.0451 26.6034 59.0726 0.2580 ? -0.0371 ? 0.0274 ? 0.2206 ? -0.0101 ? 0.3229 ? 6.6308 ? -3.1133 ? 4.4362 ? 6.5416 ? -3.4141 ? 7.0400 ? 0.1414 ? -0.8331 ? -0.2829 ? 0.3376 ? 0.2203 ? 1.2544 ? -0.1020 ? -0.9968 ? -0.4171 ? 12 'X-RAY DIFFRACTION' ? refined 82.6554 24.8145 48.4456 0.2203 ? -0.0443 ? -0.0137 ? 0.2558 ? 0.0009 ? 0.1940 ? 2.5467 ? -1.1787 ? 0.5900 ? 2.5971 ? -0.0111 ? 2.2782 ? 0.0335 ? 0.2763 ? -0.0009 ? -0.2931 ? -0.1124 ? 0.2273 ? 0.2250 ? 0.2184 ? 0.1032 ? 13 'X-RAY DIFFRACTION' ? refined 80.1116 35.9491 57.3415 0.2505 ? -0.0154 ? -0.0081 ? 0.1820 ? 0.0177 ? 0.3615 ? 0.6522 ? -0.4565 ? -0.1458 ? 2.0318 ? 3.4307 ? 7.8046 ? -0.3318 ? -0.0162 ? 0.3932 ? 0.0909 ? -0.2817 ? 0.5135 ? 0.0045 ? -0.3817 ? 0.6009 ? 14 'X-RAY DIFFRACTION' ? refined 90.5071 26.2311 55.3994 0.1998 ? -0.0074 ? -0.0054 ? 0.2486 ? 0.0460 ? 0.2108 ? 2.3711 ? -0.1902 ? -0.1055 ? 3.6481 ? 0.5763 ? 2.4506 ? 0.0060 ? 0.1916 ? 0.0291 ? -0.0133 ? 0.0404 ? -0.3837 ? -0.3027 ? 0.1795 ? 0.0065 ? 15 'X-RAY DIFFRACTION' ? refined 102.0489 30.0658 35.5906 0.2530 ? 0.0951 ? 0.0525 ? 0.3753 ? -0.0114 ? 0.3599 ? 6.9056 ? -0.7182 ? -1.1140 ? 3.3592 ? -0.3283 ? 7.0564 ? 0.3678 ? 0.3679 ? 0.2588 ? -0.1065 ? -0.0017 ? -0.3956 ? -0.6102 ? -0.7759 ? -0.4143 ? 16 'X-RAY DIFFRACTION' ? refined 97.0521 30.2100 47.0578 0.2507 ? -0.0630 ? -0.0440 ? 0.4272 ? -0.0324 ? 0.4142 ? 2.0776 ? 0.2423 ? -1.0719 ? 4.7084 ? 1.1387 ? 2.7652 ? 0.1109 ? 0.4875 ? -0.0239 ? -0.1765 ? -0.2517 ? -0.5696 ? -0.2319 ? 0.7513 ? 0.0172 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 188 ? ? A 204 ? '(chain A and resid 188:204)' 2 'X-RAY DIFFRACTION' 2 ? ? A 205 ? ? A 215 ? '(chain A and resid 205:215)' 3 'X-RAY DIFFRACTION' 3 ? ? A 216 ? ? A 232 ? '(chain A and resid 216:232)' 4 'X-RAY DIFFRACTION' 4 ? ? A 233 ? ? A 266 ? '(chain A and resid 233:266)' 5 'X-RAY DIFFRACTION' 5 ? ? A 267 ? ? A 283 ? '(chain A and resid 267:283)' 6 'X-RAY DIFFRACTION' 6 ? ? A 284 ? ? A 293 ? '(chain A and resid 284:293)' 7 'X-RAY DIFFRACTION' 7 ? ? A 294 ? ? A 306 ? '(chain A and resid 294:306)' 8 'X-RAY DIFFRACTION' 8 ? ? A 307 ? ? A 320 ? '(chain A and resid 307:320)' 9 'X-RAY DIFFRACTION' 9 ? ? A 321 ? ? A 335 ? '(chain A and resid 321:335)' 10 'X-RAY DIFFRACTION' 10 ? ? A 336 ? ? A 350 ? '(chain A and resid 336:350)' 11 'X-RAY DIFFRACTION' 11 ? ? A 351 ? ? A 361 ? '(chain A and resid 351:361)' 12 'X-RAY DIFFRACTION' 12 ? ? A 362 ? ? A 371 ? '(chain A and resid 362:371)' 13 'X-RAY DIFFRACTION' 13 ? ? A 372 ? ? A 381 ? '(chain A and resid 372:381)' 14 'X-RAY DIFFRACTION' 14 ? ? A 382 ? ? A 392 ? '(chain A and resid 382:392)' 15 'X-RAY DIFFRACTION' 15 ? ? A 393 ? ? A 407 ? '(chain A and resid 393:407)' 16 'X-RAY DIFFRACTION' 16 ? ? S 558 ? ? S 574 ? '(chain S and resid 558:574)' # _pdbx_entry_details.entry_id 6YW3 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 175 ? A GLY 1 2 1 Y 1 A SER 176 ? A SER 2 3 1 Y 1 A HIS 177 ? A HIS 3 4 1 Y 1 A MET 178 ? A MET 4 5 1 Y 1 A ALA 179 ? A ALA 5 6 1 Y 1 A SER 180 ? A SER 6 7 1 Y 1 A PRO 181 ? A PRO 7 8 1 Y 1 A ASN 182 ? A ASN 8 9 1 Y 1 A GLY 183 ? A GLY 9 10 1 Y 1 A GLN 184 ? A GLN 10 11 1 Y 1 S ASP 556 ? C ASP 1 12 1 Y 1 S LEU 557 ? C LEU 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 48V O10 O N N 1 48V N01 N N N 2 48V C02 C N R 3 48V C03 C N N 4 48V O04 O N N 5 48V N05 N N N 6 48V C06 C N N 7 48V S07 S N N 8 48V C08 C N N 9 48V C09 C N N 10 48V O1 O N N 11 48V H1 H N N 12 48V H2 H N N 13 48V H4 H N N 14 48V H5 H N N 15 48V H6 H N N 16 48V H7 H N N 17 48V H8 H N N 18 48V H9 H N N 19 48V H10 H N N 20 48V H11 H N N 21 ALA N N N N 22 ALA CA C N S 23 ALA C C N N 24 ALA O O N N 25 ALA CB C N N 26 ALA OXT O N N 27 ALA H H N N 28 ALA H2 H N N 29 ALA HA H N N 30 ALA HB1 H N N 31 ALA HB2 H N N 32 ALA HB3 H N N 33 ALA HXT H N N 34 ARG N N N N 35 ARG CA C N S 36 ARG C C N N 37 ARG O O N N 38 ARG CB C N N 39 ARG CG C N N 40 ARG CD C N N 41 ARG NE N N N 42 ARG CZ C N N 43 ARG NH1 N N N 44 ARG NH2 N N N 45 ARG OXT O N N 46 ARG H H N N 47 ARG H2 H N N 48 ARG HA H N N 49 ARG HB2 H N N 50 ARG HB3 H N N 51 ARG HG2 H N N 52 ARG HG3 H N N 53 ARG HD2 H N N 54 ARG HD3 H N N 55 ARG HE H N N 56 ARG HH11 H N N 57 ARG HH12 H N N 58 ARG HH21 H N N 59 ARG HH22 H N N 60 ARG HXT H N N 61 ASN N N N N 62 ASN CA C N S 63 ASN C C N N 64 ASN O O N N 65 ASN CB C N N 66 ASN CG C N N 67 ASN OD1 O N N 68 ASN ND2 N N N 69 ASN OXT O N N 70 ASN H H N N 71 ASN H2 H N N 72 ASN HA H N N 73 ASN HB2 H N N 74 ASN HB3 H N N 75 ASN HD21 H N N 76 ASN HD22 H N N 77 ASN HXT H N N 78 ASP N N N N 79 ASP CA C N S 80 ASP C C N N 81 ASP O O N N 82 ASP CB C N N 83 ASP CG C N N 84 ASP OD1 O N N 85 ASP OD2 O N N 86 ASP OXT O N N 87 ASP H H N N 88 ASP H2 H N N 89 ASP HA H N N 90 ASP HB2 H N N 91 ASP HB3 H N N 92 ASP HD2 H N N 93 ASP HXT H N N 94 CYS N N N N 95 CYS CA C N R 96 CYS C C N N 97 CYS O O N N 98 CYS CB C N N 99 CYS SG S N N 100 CYS OXT O N N 101 CYS H H N N 102 CYS H2 H N N 103 CYS HA H N N 104 CYS HB2 H N N 105 CYS HB3 H N N 106 CYS HG H N N 107 CYS HXT H N N 108 DTY N N N N 109 DTY CA C N R 110 DTY C C N N 111 DTY O O N N 112 DTY CB C N N 113 DTY CG C Y N 114 DTY CD1 C Y N 115 DTY CD2 C Y N 116 DTY CE1 C Y N 117 DTY CE2 C Y N 118 DTY CZ C Y N 119 DTY OH O N N 120 DTY OXT O N N 121 DTY H H N N 122 DTY H2 H N N 123 DTY HA H N N 124 DTY HB2 H N N 125 DTY HB3 H N N 126 DTY HD1 H N N 127 DTY HD2 H N N 128 DTY HE1 H N N 129 DTY HE2 H N N 130 DTY HH H N N 131 DTY HXT H N N 132 GLN N N N N 133 GLN CA C N S 134 GLN C C N N 135 GLN O O N N 136 GLN CB C N N 137 GLN CG C N N 138 GLN CD C N N 139 GLN OE1 O N N 140 GLN NE2 N N N 141 GLN OXT O N N 142 GLN H H N N 143 GLN H2 H N N 144 GLN HA H N N 145 GLN HB2 H N N 146 GLN HB3 H N N 147 GLN HG2 H N N 148 GLN HG3 H N N 149 GLN HE21 H N N 150 GLN HE22 H N N 151 GLN HXT H N N 152 GLU N N N N 153 GLU CA C N S 154 GLU C C N N 155 GLU O O N N 156 GLU CB C N N 157 GLU CG C N N 158 GLU CD C N N 159 GLU OE1 O N N 160 GLU OE2 O N N 161 GLU OXT O N N 162 GLU H H N N 163 GLU H2 H N N 164 GLU HA H N N 165 GLU HB2 H N N 166 GLU HB3 H N N 167 GLU HG2 H N N 168 GLU HG3 H N N 169 GLU HE2 H N N 170 GLU HXT H N N 171 GLY N N N N 172 GLY CA C N N 173 GLY C C N N 174 GLY O O N N 175 GLY OXT O N N 176 GLY H H N N 177 GLY H2 H N N 178 GLY HA2 H N N 179 GLY HA3 H N N 180 GLY HXT H N N 181 GOL C1 C N N 182 GOL O1 O N N 183 GOL C2 C N N 184 GOL O2 O N N 185 GOL C3 C N N 186 GOL O3 O N N 187 GOL H11 H N N 188 GOL H12 H N N 189 GOL HO1 H N N 190 GOL H2 H N N 191 GOL HO2 H N N 192 GOL H31 H N N 193 GOL H32 H N N 194 GOL HO3 H N N 195 HIS N N N N 196 HIS CA C N S 197 HIS C C N N 198 HIS O O N N 199 HIS CB C N N 200 HIS CG C Y N 201 HIS ND1 N Y N 202 HIS CD2 C Y N 203 HIS CE1 C Y N 204 HIS NE2 N Y N 205 HIS OXT O N N 206 HIS H H N N 207 HIS H2 H N N 208 HIS HA H N N 209 HIS HB2 H N N 210 HIS HB3 H N N 211 HIS HD1 H N N 212 HIS HD2 H N N 213 HIS HE1 H N N 214 HIS HE2 H N N 215 HIS HXT H N N 216 HOH O O N N 217 HOH H1 H N N 218 HOH H2 H N N 219 ILE N N N N 220 ILE CA C N S 221 ILE C C N N 222 ILE O O N N 223 ILE CB C N S 224 ILE CG1 C N N 225 ILE CG2 C N N 226 ILE CD1 C N N 227 ILE OXT O N N 228 ILE H H N N 229 ILE H2 H N N 230 ILE HA H N N 231 ILE HB H N N 232 ILE HG12 H N N 233 ILE HG13 H N N 234 ILE HG21 H N N 235 ILE HG22 H N N 236 ILE HG23 H N N 237 ILE HD11 H N N 238 ILE HD12 H N N 239 ILE HD13 H N N 240 ILE HXT H N N 241 LEU N N N N 242 LEU CA C N S 243 LEU C C N N 244 LEU O O N N 245 LEU CB C N N 246 LEU CG C N N 247 LEU CD1 C N N 248 LEU CD2 C N N 249 LEU OXT O N N 250 LEU H H N N 251 LEU H2 H N N 252 LEU HA H N N 253 LEU HB2 H N N 254 LEU HB3 H N N 255 LEU HG H N N 256 LEU HD11 H N N 257 LEU HD12 H N N 258 LEU HD13 H N N 259 LEU HD21 H N N 260 LEU HD22 H N N 261 LEU HD23 H N N 262 LEU HXT H N N 263 LYS N N N N 264 LYS CA C N S 265 LYS C C N N 266 LYS O O N N 267 LYS CB C N N 268 LYS CG C N N 269 LYS CD C N N 270 LYS CE C N N 271 LYS NZ N N N 272 LYS OXT O N N 273 LYS H H N N 274 LYS H2 H N N 275 LYS HA H N N 276 LYS HB2 H N N 277 LYS HB3 H N N 278 LYS HG2 H N N 279 LYS HG3 H N N 280 LYS HD2 H N N 281 LYS HD3 H N N 282 LYS HE2 H N N 283 LYS HE3 H N N 284 LYS HZ1 H N N 285 LYS HZ2 H N N 286 LYS HZ3 H N N 287 LYS HXT H N N 288 MET N N N N 289 MET CA C N S 290 MET C C N N 291 MET O O N N 292 MET CB C N N 293 MET CG C N N 294 MET SD S N N 295 MET CE C N N 296 MET OXT O N N 297 MET H H N N 298 MET H2 H N N 299 MET HA H N N 300 MET HB2 H N N 301 MET HB3 H N N 302 MET HG2 H N N 303 MET HG3 H N N 304 MET HE1 H N N 305 MET HE2 H N N 306 MET HE3 H N N 307 MET HXT H N N 308 MN MN MN N N 309 OGA C1 C N N 310 OGA C2 C N N 311 OGA C4 C N N 312 OGA C5 C N N 313 OGA O1 O N N 314 OGA O2 O N N 315 OGA "O2'" O N N 316 OGA O3 O N N 317 OGA N1 N N N 318 OGA O4 O N N 319 OGA H4C1 H N N 320 OGA H4C2 H N N 321 OGA H2 H N N 322 OGA H3 H N N 323 OGA H1 H N N 324 PHE N N N N 325 PHE CA C N S 326 PHE C C N N 327 PHE O O N N 328 PHE CB C N N 329 PHE CG C Y N 330 PHE CD1 C Y N 331 PHE CD2 C Y N 332 PHE CE1 C Y N 333 PHE CE2 C Y N 334 PHE CZ C Y N 335 PHE OXT O N N 336 PHE H H N N 337 PHE H2 H N N 338 PHE HA H N N 339 PHE HB2 H N N 340 PHE HB3 H N N 341 PHE HD1 H N N 342 PHE HD2 H N N 343 PHE HE1 H N N 344 PHE HE2 H N N 345 PHE HZ H N N 346 PHE HXT H N N 347 PRO N N N N 348 PRO CA C N S 349 PRO C C N N 350 PRO O O N N 351 PRO CB C N N 352 PRO CG C N N 353 PRO CD C N N 354 PRO OXT O N N 355 PRO H H N N 356 PRO HA H N N 357 PRO HB2 H N N 358 PRO HB3 H N N 359 PRO HG2 H N N 360 PRO HG3 H N N 361 PRO HD2 H N N 362 PRO HD3 H N N 363 PRO HXT H N N 364 SER N N N N 365 SER CA C N S 366 SER C C N N 367 SER O O N N 368 SER CB C N N 369 SER OG O N N 370 SER OXT O N N 371 SER H H N N 372 SER H2 H N N 373 SER HA H N N 374 SER HB2 H N N 375 SER HB3 H N N 376 SER HG H N N 377 SER HXT H N N 378 SO4 S S N N 379 SO4 O1 O N N 380 SO4 O2 O N N 381 SO4 O3 O N N 382 SO4 O4 O N N 383 THR N N N N 384 THR CA C N S 385 THR C C N N 386 THR O O N N 387 THR CB C N R 388 THR OG1 O N N 389 THR CG2 C N N 390 THR OXT O N N 391 THR H H N N 392 THR H2 H N N 393 THR HA H N N 394 THR HB H N N 395 THR HG1 H N N 396 THR HG21 H N N 397 THR HG22 H N N 398 THR HG23 H N N 399 THR HXT H N N 400 TRP N N N N 401 TRP CA C N S 402 TRP C C N N 403 TRP O O N N 404 TRP CB C N N 405 TRP CG C Y N 406 TRP CD1 C Y N 407 TRP CD2 C Y N 408 TRP NE1 N Y N 409 TRP CE2 C Y N 410 TRP CE3 C Y N 411 TRP CZ2 C Y N 412 TRP CZ3 C Y N 413 TRP CH2 C Y N 414 TRP OXT O N N 415 TRP H H N N 416 TRP H2 H N N 417 TRP HA H N N 418 TRP HB2 H N N 419 TRP HB3 H N N 420 TRP HD1 H N N 421 TRP HE1 H N N 422 TRP HE3 H N N 423 TRP HZ2 H N N 424 TRP HZ3 H N N 425 TRP HH2 H N N 426 TRP HXT H N N 427 TYR N N N N 428 TYR CA C N S 429 TYR C C N N 430 TYR O O N N 431 TYR CB C N N 432 TYR CG C Y N 433 TYR CD1 C Y N 434 TYR CD2 C Y N 435 TYR CE1 C Y N 436 TYR CE2 C Y N 437 TYR CZ C Y N 438 TYR OH O N N 439 TYR OXT O N N 440 TYR H H N N 441 TYR H2 H N N 442 TYR HA H N N 443 TYR HB2 H N N 444 TYR HB3 H N N 445 TYR HD1 H N N 446 TYR HD2 H N N 447 TYR HE1 H N N 448 TYR HE2 H N N 449 TYR HH H N N 450 TYR HXT H N N 451 VAL N N N N 452 VAL CA C N S 453 VAL C C N N 454 VAL O O N N 455 VAL CB C N N 456 VAL CG1 C N N 457 VAL CG2 C N N 458 VAL OXT O N N 459 VAL H H N N 460 VAL H2 H N N 461 VAL HA H N N 462 VAL HB H N N 463 VAL HG11 H N N 464 VAL HG12 H N N 465 VAL HG13 H N N 466 VAL HG21 H N N 467 VAL HG22 H N N 468 VAL HG23 H N N 469 VAL HXT H N N 470 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 48V N05 C03 sing N N 1 48V C03 O04 doub N N 2 48V C03 C02 sing N N 3 48V N01 C02 sing N N 4 48V C02 C06 sing N N 5 48V C06 S07 sing N N 6 48V S07 C08 sing N N 7 48V O10 C09 doub N N 8 48V C08 C09 sing N N 9 48V C09 O1 sing N N 10 48V N01 H1 sing N N 11 48V N01 H2 sing N N 12 48V C02 H4 sing N N 13 48V N05 H5 sing N N 14 48V N05 H6 sing N N 15 48V C06 H7 sing N N 16 48V C06 H8 sing N N 17 48V C08 H9 sing N N 18 48V C08 H10 sing N N 19 48V O1 H11 sing N N 20 ALA N CA sing N N 21 ALA N H sing N N 22 ALA N H2 sing N N 23 ALA CA C sing N N 24 ALA CA CB sing N N 25 ALA CA HA sing N N 26 ALA C O doub N N 27 ALA C OXT sing N N 28 ALA CB HB1 sing N N 29 ALA CB HB2 sing N N 30 ALA CB HB3 sing N N 31 ALA OXT HXT sing N N 32 ARG N CA sing N N 33 ARG N H sing N N 34 ARG N H2 sing N N 35 ARG CA C sing N N 36 ARG CA CB sing N N 37 ARG CA HA sing N N 38 ARG C O doub N N 39 ARG C OXT sing N N 40 ARG CB CG sing N N 41 ARG CB HB2 sing N N 42 ARG CB HB3 sing N N 43 ARG CG CD sing N N 44 ARG CG HG2 sing N N 45 ARG CG HG3 sing N N 46 ARG CD NE sing N N 47 ARG CD HD2 sing N N 48 ARG CD HD3 sing N N 49 ARG NE CZ sing N N 50 ARG NE HE sing N N 51 ARG CZ NH1 sing N N 52 ARG CZ NH2 doub N N 53 ARG NH1 HH11 sing N N 54 ARG NH1 HH12 sing N N 55 ARG NH2 HH21 sing N N 56 ARG NH2 HH22 sing N N 57 ARG OXT HXT sing N N 58 ASN N CA sing N N 59 ASN N H sing N N 60 ASN N H2 sing N N 61 ASN CA C sing N N 62 ASN CA CB sing N N 63 ASN CA HA sing N N 64 ASN C O doub N N 65 ASN C OXT sing N N 66 ASN CB CG sing N N 67 ASN CB HB2 sing N N 68 ASN CB HB3 sing N N 69 ASN CG OD1 doub N N 70 ASN CG ND2 sing N N 71 ASN ND2 HD21 sing N N 72 ASN ND2 HD22 sing N N 73 ASN OXT HXT sing N N 74 ASP N CA sing N N 75 ASP N H sing N N 76 ASP N H2 sing N N 77 ASP CA C sing N N 78 ASP CA CB sing N N 79 ASP CA HA sing N N 80 ASP C O doub N N 81 ASP C OXT sing N N 82 ASP CB CG sing N N 83 ASP CB HB2 sing N N 84 ASP CB HB3 sing N N 85 ASP CG OD1 doub N N 86 ASP CG OD2 sing N N 87 ASP OD2 HD2 sing N N 88 ASP OXT HXT sing N N 89 CYS N CA sing N N 90 CYS N H sing N N 91 CYS N H2 sing N N 92 CYS CA C sing N N 93 CYS CA CB sing N N 94 CYS CA HA sing N N 95 CYS C O doub N N 96 CYS C OXT sing N N 97 CYS CB SG sing N N 98 CYS CB HB2 sing N N 99 CYS CB HB3 sing N N 100 CYS SG HG sing N N 101 CYS OXT HXT sing N N 102 DTY N CA sing N N 103 DTY N H sing N N 104 DTY N H2 sing N N 105 DTY CA C sing N N 106 DTY CA CB sing N N 107 DTY CA HA sing N N 108 DTY C O doub N N 109 DTY C OXT sing N N 110 DTY CB CG sing N N 111 DTY CB HB2 sing N N 112 DTY CB HB3 sing N N 113 DTY CG CD1 doub Y N 114 DTY CG CD2 sing Y N 115 DTY CD1 CE1 sing Y N 116 DTY CD1 HD1 sing N N 117 DTY CD2 CE2 doub Y N 118 DTY CD2 HD2 sing N N 119 DTY CE1 CZ doub Y N 120 DTY CE1 HE1 sing N N 121 DTY CE2 CZ sing Y N 122 DTY CE2 HE2 sing N N 123 DTY CZ OH sing N N 124 DTY OH HH sing N N 125 DTY OXT HXT sing N N 126 GLN N CA sing N N 127 GLN N H sing N N 128 GLN N H2 sing N N 129 GLN CA C sing N N 130 GLN CA CB sing N N 131 GLN CA HA sing N N 132 GLN C O doub N N 133 GLN C OXT sing N N 134 GLN CB CG sing N N 135 GLN CB HB2 sing N N 136 GLN CB HB3 sing N N 137 GLN CG CD sing N N 138 GLN CG HG2 sing N N 139 GLN CG HG3 sing N N 140 GLN CD OE1 doub N N 141 GLN CD NE2 sing N N 142 GLN NE2 HE21 sing N N 143 GLN NE2 HE22 sing N N 144 GLN OXT HXT sing N N 145 GLU N CA sing N N 146 GLU N H sing N N 147 GLU N H2 sing N N 148 GLU CA C sing N N 149 GLU CA CB sing N N 150 GLU CA HA sing N N 151 GLU C O doub N N 152 GLU C OXT sing N N 153 GLU CB CG sing N N 154 GLU CB HB2 sing N N 155 GLU CB HB3 sing N N 156 GLU CG CD sing N N 157 GLU CG HG2 sing N N 158 GLU CG HG3 sing N N 159 GLU CD OE1 doub N N 160 GLU CD OE2 sing N N 161 GLU OE2 HE2 sing N N 162 GLU OXT HXT sing N N 163 GLY N CA sing N N 164 GLY N H sing N N 165 GLY N H2 sing N N 166 GLY CA C sing N N 167 GLY CA HA2 sing N N 168 GLY CA HA3 sing N N 169 GLY C O doub N N 170 GLY C OXT sing N N 171 GLY OXT HXT sing N N 172 GOL C1 O1 sing N N 173 GOL C1 C2 sing N N 174 GOL C1 H11 sing N N 175 GOL C1 H12 sing N N 176 GOL O1 HO1 sing N N 177 GOL C2 O2 sing N N 178 GOL C2 C3 sing N N 179 GOL C2 H2 sing N N 180 GOL O2 HO2 sing N N 181 GOL C3 O3 sing N N 182 GOL C3 H31 sing N N 183 GOL C3 H32 sing N N 184 GOL O3 HO3 sing N N 185 HIS N CA sing N N 186 HIS N H sing N N 187 HIS N H2 sing N N 188 HIS CA C sing N N 189 HIS CA CB sing N N 190 HIS CA HA sing N N 191 HIS C O doub N N 192 HIS C OXT sing N N 193 HIS CB CG sing N N 194 HIS CB HB2 sing N N 195 HIS CB HB3 sing N N 196 HIS CG ND1 sing Y N 197 HIS CG CD2 doub Y N 198 HIS ND1 CE1 doub Y N 199 HIS ND1 HD1 sing N N 200 HIS CD2 NE2 sing Y N 201 HIS CD2 HD2 sing N N 202 HIS CE1 NE2 sing Y N 203 HIS CE1 HE1 sing N N 204 HIS NE2 HE2 sing N N 205 HIS OXT HXT sing N N 206 HOH O H1 sing N N 207 HOH O H2 sing N N 208 ILE N CA sing N N 209 ILE N H sing N N 210 ILE N H2 sing N N 211 ILE CA C sing N N 212 ILE CA CB sing N N 213 ILE CA HA sing N N 214 ILE C O doub N N 215 ILE C OXT sing N N 216 ILE CB CG1 sing N N 217 ILE CB CG2 sing N N 218 ILE CB HB sing N N 219 ILE CG1 CD1 sing N N 220 ILE CG1 HG12 sing N N 221 ILE CG1 HG13 sing N N 222 ILE CG2 HG21 sing N N 223 ILE CG2 HG22 sing N N 224 ILE CG2 HG23 sing N N 225 ILE CD1 HD11 sing N N 226 ILE CD1 HD12 sing N N 227 ILE CD1 HD13 sing N N 228 ILE OXT HXT sing N N 229 LEU N CA sing N N 230 LEU N H sing N N 231 LEU N H2 sing N N 232 LEU CA C sing N N 233 LEU CA CB sing N N 234 LEU CA HA sing N N 235 LEU C O doub N N 236 LEU C OXT sing N N 237 LEU CB CG sing N N 238 LEU CB HB2 sing N N 239 LEU CB HB3 sing N N 240 LEU CG CD1 sing N N 241 LEU CG CD2 sing N N 242 LEU CG HG sing N N 243 LEU CD1 HD11 sing N N 244 LEU CD1 HD12 sing N N 245 LEU CD1 HD13 sing N N 246 LEU CD2 HD21 sing N N 247 LEU CD2 HD22 sing N N 248 LEU CD2 HD23 sing N N 249 LEU OXT HXT sing N N 250 LYS N CA sing N N 251 LYS N H sing N N 252 LYS N H2 sing N N 253 LYS CA C sing N N 254 LYS CA CB sing N N 255 LYS CA HA sing N N 256 LYS C O doub N N 257 LYS C OXT sing N N 258 LYS CB CG sing N N 259 LYS CB HB2 sing N N 260 LYS CB HB3 sing N N 261 LYS CG CD sing N N 262 LYS CG HG2 sing N N 263 LYS CG HG3 sing N N 264 LYS CD CE sing N N 265 LYS CD HD2 sing N N 266 LYS CD HD3 sing N N 267 LYS CE NZ sing N N 268 LYS CE HE2 sing N N 269 LYS CE HE3 sing N N 270 LYS NZ HZ1 sing N N 271 LYS NZ HZ2 sing N N 272 LYS NZ HZ3 sing N N 273 LYS OXT HXT sing N N 274 MET N CA sing N N 275 MET N H sing N N 276 MET N H2 sing N N 277 MET CA C sing N N 278 MET CA CB sing N N 279 MET CA HA sing N N 280 MET C O doub N N 281 MET C OXT sing N N 282 MET CB CG sing N N 283 MET CB HB2 sing N N 284 MET CB HB3 sing N N 285 MET CG SD sing N N 286 MET CG HG2 sing N N 287 MET CG HG3 sing N N 288 MET SD CE sing N N 289 MET CE HE1 sing N N 290 MET CE HE2 sing N N 291 MET CE HE3 sing N N 292 MET OXT HXT sing N N 293 OGA C1 C2 sing N N 294 OGA C1 O1 doub N N 295 OGA C1 O2 sing N N 296 OGA C2 "O2'" doub N N 297 OGA C2 N1 sing N N 298 OGA C4 C5 sing N N 299 OGA C4 N1 sing N N 300 OGA C4 H4C1 sing N N 301 OGA C4 H4C2 sing N N 302 OGA C5 O3 sing N N 303 OGA C5 O4 doub N N 304 OGA O2 H2 sing N N 305 OGA O3 H3 sing N N 306 OGA N1 H1 sing N N 307 PHE N CA sing N N 308 PHE N H sing N N 309 PHE N H2 sing N N 310 PHE CA C sing N N 311 PHE CA CB sing N N 312 PHE CA HA sing N N 313 PHE C O doub N N 314 PHE C OXT sing N N 315 PHE CB CG sing N N 316 PHE CB HB2 sing N N 317 PHE CB HB3 sing N N 318 PHE CG CD1 doub Y N 319 PHE CG CD2 sing Y N 320 PHE CD1 CE1 sing Y N 321 PHE CD1 HD1 sing N N 322 PHE CD2 CE2 doub Y N 323 PHE CD2 HD2 sing N N 324 PHE CE1 CZ doub Y N 325 PHE CE1 HE1 sing N N 326 PHE CE2 CZ sing Y N 327 PHE CE2 HE2 sing N N 328 PHE CZ HZ sing N N 329 PHE OXT HXT sing N N 330 PRO N CA sing N N 331 PRO N CD sing N N 332 PRO N H sing N N 333 PRO CA C sing N N 334 PRO CA CB sing N N 335 PRO CA HA sing N N 336 PRO C O doub N N 337 PRO C OXT sing N N 338 PRO CB CG sing N N 339 PRO CB HB2 sing N N 340 PRO CB HB3 sing N N 341 PRO CG CD sing N N 342 PRO CG HG2 sing N N 343 PRO CG HG3 sing N N 344 PRO CD HD2 sing N N 345 PRO CD HD3 sing N N 346 PRO OXT HXT sing N N 347 SER N CA sing N N 348 SER N H sing N N 349 SER N H2 sing N N 350 SER CA C sing N N 351 SER CA CB sing N N 352 SER CA HA sing N N 353 SER C O doub N N 354 SER C OXT sing N N 355 SER CB OG sing N N 356 SER CB HB2 sing N N 357 SER CB HB3 sing N N 358 SER OG HG sing N N 359 SER OXT HXT sing N N 360 SO4 S O1 doub N N 361 SO4 S O2 doub N N 362 SO4 S O3 sing N N 363 SO4 S O4 sing N N 364 THR N CA sing N N 365 THR N H sing N N 366 THR N H2 sing N N 367 THR CA C sing N N 368 THR CA CB sing N N 369 THR CA HA sing N N 370 THR C O doub N N 371 THR C OXT sing N N 372 THR CB OG1 sing N N 373 THR CB CG2 sing N N 374 THR CB HB sing N N 375 THR OG1 HG1 sing N N 376 THR CG2 HG21 sing N N 377 THR CG2 HG22 sing N N 378 THR CG2 HG23 sing N N 379 THR OXT HXT sing N N 380 TRP N CA sing N N 381 TRP N H sing N N 382 TRP N H2 sing N N 383 TRP CA C sing N N 384 TRP CA CB sing N N 385 TRP CA HA sing N N 386 TRP C O doub N N 387 TRP C OXT sing N N 388 TRP CB CG sing N N 389 TRP CB HB2 sing N N 390 TRP CB HB3 sing N N 391 TRP CG CD1 doub Y N 392 TRP CG CD2 sing Y N 393 TRP CD1 NE1 sing Y N 394 TRP CD1 HD1 sing N N 395 TRP CD2 CE2 doub Y N 396 TRP CD2 CE3 sing Y N 397 TRP NE1 CE2 sing Y N 398 TRP NE1 HE1 sing N N 399 TRP CE2 CZ2 sing Y N 400 TRP CE3 CZ3 doub Y N 401 TRP CE3 HE3 sing N N 402 TRP CZ2 CH2 doub Y N 403 TRP CZ2 HZ2 sing N N 404 TRP CZ3 CH2 sing Y N 405 TRP CZ3 HZ3 sing N N 406 TRP CH2 HH2 sing N N 407 TRP OXT HXT sing N N 408 TYR N CA sing N N 409 TYR N H sing N N 410 TYR N H2 sing N N 411 TYR CA C sing N N 412 TYR CA CB sing N N 413 TYR CA HA sing N N 414 TYR C O doub N N 415 TYR C OXT sing N N 416 TYR CB CG sing N N 417 TYR CB HB2 sing N N 418 TYR CB HB3 sing N N 419 TYR CG CD1 doub Y N 420 TYR CG CD2 sing Y N 421 TYR CD1 CE1 sing Y N 422 TYR CD1 HD1 sing N N 423 TYR CD2 CE2 doub Y N 424 TYR CD2 HD2 sing N N 425 TYR CE1 CZ doub Y N 426 TYR CE1 HE1 sing N N 427 TYR CE2 CZ sing Y N 428 TYR CE2 HE2 sing N N 429 TYR CZ OH sing N N 430 TYR OH HH sing N N 431 TYR OXT HXT sing N N 432 VAL N CA sing N N 433 VAL N H sing N N 434 VAL N H2 sing N N 435 VAL CA C sing N N 436 VAL CA CB sing N N 437 VAL CA HA sing N N 438 VAL C O doub N N 439 VAL C OXT sing N N 440 VAL CB CG1 sing N N 441 VAL CB CG2 sing N N 442 VAL CB HB sing N N 443 VAL CG1 HG11 sing N N 444 VAL CG1 HG12 sing N N 445 VAL CG1 HG13 sing N N 446 VAL CG2 HG21 sing N N 447 VAL CG2 HG22 sing N N 448 VAL CG2 HG23 sing N N 449 VAL OXT HXT sing N N 450 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id OGA _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id OGA _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5L9R _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 6YW3 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.013082 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012302 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023138 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H MN N O S # loop_