data_6ZEU # _entry.id 6ZEU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6ZEU pdb_00006zeu 10.2210/pdb6zeu/pdb WWPDB D_1292108844 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-10-14 2 'Structure model' 1 1 2020-11-25 3 'Structure model' 1 2 2021-02-10 4 'Structure model' 1 3 2023-09-13 5 'Structure model' 1 4 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' em_entity_assembly 2 3 'Structure model' pdbx_related_exp_data_set 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 6 4 'Structure model' pdbx_initial_refinement_model 7 5 'Structure model' em_3d_fitting_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_em_3d_fitting_list.accession_code' 4 5 'Structure model' '_em_3d_fitting_list.initial_refinement_model_id' 5 5 'Structure model' '_em_3d_fitting_list.source_name' 6 5 'Structure model' '_em_3d_fitting_list.type' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6ZEU _pdbx_database_status.recvd_initial_deposition_date 2020-06-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible N # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Evans, G.' 1 0000-0002-6079-2201 'Zhang, P.' 2 0000-0003-1803-691X 'Beale, E.V.' 3 0000-0002-7814-734X 'Waterman, D.G.' 4 0000-0002-2134-182X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country CH _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Front Mol Biosci' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2296-889X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 7 _citation.language ? _citation.page_first 179 _citation.page_last 179 _citation.title 'A Workflow for Protein Structure Determination From Thin Crystal Lamella by Micro-Electron Diffraction.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.3389/fmolb.2020.00179 _citation.pdbx_database_id_PubMed 32850967 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Beale, E.V.' 1 ? primary 'Waterman, D.G.' 2 ? primary 'Hecksel, C.' 3 ? primary 'van Rooyen, J.' 4 ? primary 'Gilchrist, J.B.' 5 ? primary 'Parkhurst, J.M.' 6 ? primary 'de Haas, F.' 7 ? primary 'Buijsse, B.' 8 ? primary 'Evans, G.' 9 ? primary 'Zhang, P.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Proteinase K' 28958.791 1 3.4.21.64 ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 water nat water 18.015 26 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Endopeptidase K,Tritirachium alkaline proteinase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AAQTNAPWGLARISSTSPGTSTYYYDESAGQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYSSRDGNGHGTHCAGTVGSR TYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGGYSSSVNSAAARLQSSGVMVAVAAG NNNADARNYSPASEPSVCTVGASDRYDRRSSFSNYGSVLDIFGPGTDILSTWIGGSTRSISGTSMATPHVAGLAAYLMTL GKTTAASACRYIADTANKGDLSNIPFGTVNLLAYNNYQA ; _entity_poly.pdbx_seq_one_letter_code_can ;AAQTNAPWGLARISSTSPGTSTYYYDESAGQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYSSRDGNGHGTHCAGTVGSR TYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGGYSSSVNSAAARLQSSGVMVAVAAG NNNADARNYSPASEPSVCTVGASDRYDRRSSFSNYGSVLDIFGPGTDILSTWIGGSTRSISGTSMATPHVAGLAAYLMTL GKTTAASACRYIADTANKGDLSNIPFGTVNLLAYNNYQA ; _entity_poly.pdbx_strand_id AAA _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ALA n 1 3 GLN n 1 4 THR n 1 5 ASN n 1 6 ALA n 1 7 PRO n 1 8 TRP n 1 9 GLY n 1 10 LEU n 1 11 ALA n 1 12 ARG n 1 13 ILE n 1 14 SER n 1 15 SER n 1 16 THR n 1 17 SER n 1 18 PRO n 1 19 GLY n 1 20 THR n 1 21 SER n 1 22 THR n 1 23 TYR n 1 24 TYR n 1 25 TYR n 1 26 ASP n 1 27 GLU n 1 28 SER n 1 29 ALA n 1 30 GLY n 1 31 GLN n 1 32 GLY n 1 33 SER n 1 34 CYS n 1 35 VAL n 1 36 TYR n 1 37 VAL n 1 38 ILE n 1 39 ASP n 1 40 THR n 1 41 GLY n 1 42 ILE n 1 43 GLU n 1 44 ALA n 1 45 SER n 1 46 HIS n 1 47 PRO n 1 48 GLU n 1 49 PHE n 1 50 GLU n 1 51 GLY n 1 52 ARG n 1 53 ALA n 1 54 GLN n 1 55 MET n 1 56 VAL n 1 57 LYS n 1 58 THR n 1 59 TYR n 1 60 TYR n 1 61 TYR n 1 62 SER n 1 63 SER n 1 64 ARG n 1 65 ASP n 1 66 GLY n 1 67 ASN n 1 68 GLY n 1 69 HIS n 1 70 GLY n 1 71 THR n 1 72 HIS n 1 73 CYS n 1 74 ALA n 1 75 GLY n 1 76 THR n 1 77 VAL n 1 78 GLY n 1 79 SER n 1 80 ARG n 1 81 THR n 1 82 TYR n 1 83 GLY n 1 84 VAL n 1 85 ALA n 1 86 LYS n 1 87 LYS n 1 88 THR n 1 89 GLN n 1 90 LEU n 1 91 PHE n 1 92 GLY n 1 93 VAL n 1 94 LYS n 1 95 VAL n 1 96 LEU n 1 97 ASP n 1 98 ASP n 1 99 ASN n 1 100 GLY n 1 101 SER n 1 102 GLY n 1 103 GLN n 1 104 TYR n 1 105 SER n 1 106 THR n 1 107 ILE n 1 108 ILE n 1 109 ALA n 1 110 GLY n 1 111 MET n 1 112 ASP n 1 113 PHE n 1 114 VAL n 1 115 ALA n 1 116 SER n 1 117 ASP n 1 118 LYS n 1 119 ASN n 1 120 ASN n 1 121 ARG n 1 122 ASN n 1 123 CYS n 1 124 PRO n 1 125 LYS n 1 126 GLY n 1 127 VAL n 1 128 VAL n 1 129 ALA n 1 130 SER n 1 131 LEU n 1 132 SER n 1 133 LEU n 1 134 GLY n 1 135 GLY n 1 136 GLY n 1 137 TYR n 1 138 SER n 1 139 SER n 1 140 SER n 1 141 VAL n 1 142 ASN n 1 143 SER n 1 144 ALA n 1 145 ALA n 1 146 ALA n 1 147 ARG n 1 148 LEU n 1 149 GLN n 1 150 SER n 1 151 SER n 1 152 GLY n 1 153 VAL n 1 154 MET n 1 155 VAL n 1 156 ALA n 1 157 VAL n 1 158 ALA n 1 159 ALA n 1 160 GLY n 1 161 ASN n 1 162 ASN n 1 163 ASN n 1 164 ALA n 1 165 ASP n 1 166 ALA n 1 167 ARG n 1 168 ASN n 1 169 TYR n 1 170 SER n 1 171 PRO n 1 172 ALA n 1 173 SER n 1 174 GLU n 1 175 PRO n 1 176 SER n 1 177 VAL n 1 178 CYS n 1 179 THR n 1 180 VAL n 1 181 GLY n 1 182 ALA n 1 183 SER n 1 184 ASP n 1 185 ARG n 1 186 TYR n 1 187 ASP n 1 188 ARG n 1 189 ARG n 1 190 SER n 1 191 SER n 1 192 PHE n 1 193 SER n 1 194 ASN n 1 195 TYR n 1 196 GLY n 1 197 SER n 1 198 VAL n 1 199 LEU n 1 200 ASP n 1 201 ILE n 1 202 PHE n 1 203 GLY n 1 204 PRO n 1 205 GLY n 1 206 THR n 1 207 ASP n 1 208 ILE n 1 209 LEU n 1 210 SER n 1 211 THR n 1 212 TRP n 1 213 ILE n 1 214 GLY n 1 215 GLY n 1 216 SER n 1 217 THR n 1 218 ARG n 1 219 SER n 1 220 ILE n 1 221 SER n 1 222 GLY n 1 223 THR n 1 224 SER n 1 225 MET n 1 226 ALA n 1 227 THR n 1 228 PRO n 1 229 HIS n 1 230 VAL n 1 231 ALA n 1 232 GLY n 1 233 LEU n 1 234 ALA n 1 235 ALA n 1 236 TYR n 1 237 LEU n 1 238 MET n 1 239 THR n 1 240 LEU n 1 241 GLY n 1 242 LYS n 1 243 THR n 1 244 THR n 1 245 ALA n 1 246 ALA n 1 247 SER n 1 248 ALA n 1 249 CYS n 1 250 ARG n 1 251 TYR n 1 252 ILE n 1 253 ALA n 1 254 ASP n 1 255 THR n 1 256 ALA n 1 257 ASN n 1 258 LYS n 1 259 GLY n 1 260 ASP n 1 261 LEU n 1 262 SER n 1 263 ASN n 1 264 ILE n 1 265 PRO n 1 266 PHE n 1 267 GLY n 1 268 THR n 1 269 VAL n 1 270 ASN n 1 271 LEU n 1 272 LEU n 1 273 ALA n 1 274 TYR n 1 275 ASN n 1 276 ASN n 1 277 TYR n 1 278 GLN n 1 279 ALA n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 279 _pdbx_entity_src_syn.organism_scientific 'Parengyodontium album' _pdbx_entity_src_syn.organism_common_name 'Tritirachium album' _pdbx_entity_src_syn.ncbi_taxonomy_id 37998 _pdbx_entity_src_syn.details 'Sigma-Aldrich, P2308' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA AAA . n A 1 2 ALA 2 2 2 ALA ALA AAA . n A 1 3 GLN 3 3 3 GLN GLN AAA . n A 1 4 THR 4 4 4 THR THR AAA . n A 1 5 ASN 5 5 5 ASN ASN AAA . n A 1 6 ALA 6 6 6 ALA ALA AAA . n A 1 7 PRO 7 7 7 PRO PRO AAA . n A 1 8 TRP 8 8 8 TRP TRP AAA . n A 1 9 GLY 9 9 9 GLY GLY AAA . n A 1 10 LEU 10 10 10 LEU LEU AAA . n A 1 11 ALA 11 11 11 ALA ALA AAA . n A 1 12 ARG 12 12 12 ARG ARG AAA . n A 1 13 ILE 13 13 13 ILE ILE AAA . n A 1 14 SER 14 14 14 SER SER AAA . n A 1 15 SER 15 15 15 SER SER AAA . n A 1 16 THR 16 16 16 THR THR AAA . n A 1 17 SER 17 17 17 SER SER AAA . n A 1 18 PRO 18 18 18 PRO PRO AAA . n A 1 19 GLY 19 19 19 GLY GLY AAA . n A 1 20 THR 20 20 20 THR THR AAA . n A 1 21 SER 21 21 21 SER SER AAA . n A 1 22 THR 22 22 22 THR THR AAA . n A 1 23 TYR 23 23 23 TYR TYR AAA . n A 1 24 TYR 24 24 24 TYR TYR AAA . n A 1 25 TYR 25 25 25 TYR TYR AAA . n A 1 26 ASP 26 26 26 ASP ASP AAA . n A 1 27 GLU 27 27 27 GLU GLU AAA . n A 1 28 SER 28 28 28 SER SER AAA . n A 1 29 ALA 29 29 29 ALA ALA AAA . n A 1 30 GLY 30 30 30 GLY GLY AAA . n A 1 31 GLN 31 31 31 GLN GLN AAA . n A 1 32 GLY 32 32 32 GLY GLY AAA . n A 1 33 SER 33 33 33 SER SER AAA . n A 1 34 CYS 34 34 34 CYS CYS AAA . n A 1 35 VAL 35 35 35 VAL VAL AAA . n A 1 36 TYR 36 36 36 TYR TYR AAA . n A 1 37 VAL 37 37 37 VAL VAL AAA . n A 1 38 ILE 38 38 38 ILE ILE AAA . n A 1 39 ASP 39 39 39 ASP ASP AAA . n A 1 40 THR 40 40 40 THR THR AAA . n A 1 41 GLY 41 41 41 GLY GLY AAA . n A 1 42 ILE 42 42 42 ILE ILE AAA . n A 1 43 GLU 43 43 43 GLU GLU AAA . n A 1 44 ALA 44 44 44 ALA ALA AAA . n A 1 45 SER 45 45 45 SER SER AAA . n A 1 46 HIS 46 46 46 HIS HIS AAA . n A 1 47 PRO 47 47 47 PRO PRO AAA . n A 1 48 GLU 48 48 48 GLU GLU AAA . n A 1 49 PHE 49 49 49 PHE PHE AAA . n A 1 50 GLU 50 50 50 GLU GLU AAA . n A 1 51 GLY 51 51 51 GLY GLY AAA . n A 1 52 ARG 52 52 52 ARG ARG AAA . n A 1 53 ALA 53 53 53 ALA ALA AAA . n A 1 54 GLN 54 54 54 GLN GLN AAA . n A 1 55 MET 55 55 55 MET MET AAA . n A 1 56 VAL 56 56 56 VAL VAL AAA . n A 1 57 LYS 57 57 57 LYS LYS AAA . n A 1 58 THR 58 58 58 THR THR AAA . n A 1 59 TYR 59 59 59 TYR TYR AAA . n A 1 60 TYR 60 60 60 TYR TYR AAA . n A 1 61 TYR 61 61 61 TYR TYR AAA . n A 1 62 SER 62 62 62 SER SER AAA . n A 1 63 SER 63 63 63 SER SER AAA . n A 1 64 ARG 64 64 64 ARG ARG AAA . n A 1 65 ASP 65 65 65 ASP ASP AAA . n A 1 66 GLY 66 66 66 GLY GLY AAA . n A 1 67 ASN 67 67 67 ASN ASN AAA . n A 1 68 GLY 68 68 68 GLY GLY AAA . n A 1 69 HIS 69 69 69 HIS HIS AAA . n A 1 70 GLY 70 70 70 GLY GLY AAA . n A 1 71 THR 71 71 71 THR THR AAA . n A 1 72 HIS 72 72 72 HIS HIS AAA . n A 1 73 CYS 73 73 73 CYS CYS AAA . n A 1 74 ALA 74 74 74 ALA ALA AAA . n A 1 75 GLY 75 75 75 GLY GLY AAA . n A 1 76 THR 76 76 76 THR THR AAA . n A 1 77 VAL 77 77 77 VAL VAL AAA . n A 1 78 GLY 78 78 78 GLY GLY AAA . n A 1 79 SER 79 79 79 SER SER AAA . n A 1 80 ARG 80 80 80 ARG ARG AAA . n A 1 81 THR 81 81 81 THR THR AAA . n A 1 82 TYR 82 82 82 TYR TYR AAA . n A 1 83 GLY 83 83 83 GLY GLY AAA . n A 1 84 VAL 84 84 84 VAL VAL AAA . n A 1 85 ALA 85 85 85 ALA ALA AAA . n A 1 86 LYS 86 86 86 LYS LYS AAA . n A 1 87 LYS 87 87 87 LYS LYS AAA . n A 1 88 THR 88 88 88 THR THR AAA . n A 1 89 GLN 89 89 89 GLN GLN AAA . n A 1 90 LEU 90 90 90 LEU LEU AAA . n A 1 91 PHE 91 91 91 PHE PHE AAA . n A 1 92 GLY 92 92 92 GLY GLY AAA . n A 1 93 VAL 93 93 93 VAL VAL AAA . n A 1 94 LYS 94 94 94 LYS LYS AAA . n A 1 95 VAL 95 95 95 VAL VAL AAA . n A 1 96 LEU 96 96 96 LEU LEU AAA . n A 1 97 ASP 97 97 97 ASP ASP AAA . n A 1 98 ASP 98 98 98 ASP ASP AAA . n A 1 99 ASN 99 99 99 ASN ASN AAA . n A 1 100 GLY 100 100 100 GLY GLY AAA . n A 1 101 SER 101 101 101 SER SER AAA . n A 1 102 GLY 102 102 102 GLY GLY AAA . n A 1 103 GLN 103 103 103 GLN GLN AAA . n A 1 104 TYR 104 104 104 TYR TYR AAA . n A 1 105 SER 105 105 105 SER SER AAA . n A 1 106 THR 106 106 106 THR THR AAA . n A 1 107 ILE 107 107 107 ILE ILE AAA . n A 1 108 ILE 108 108 108 ILE ILE AAA . n A 1 109 ALA 109 109 109 ALA ALA AAA . n A 1 110 GLY 110 110 110 GLY GLY AAA . n A 1 111 MET 111 111 111 MET MET AAA . n A 1 112 ASP 112 112 112 ASP ASP AAA . n A 1 113 PHE 113 113 113 PHE PHE AAA . n A 1 114 VAL 114 114 114 VAL VAL AAA . n A 1 115 ALA 115 115 115 ALA ALA AAA . n A 1 116 SER 116 116 116 SER SER AAA . n A 1 117 ASP 117 117 117 ASP ASP AAA . n A 1 118 LYS 118 118 118 LYS LYS AAA . n A 1 119 ASN 119 119 119 ASN ASN AAA . n A 1 120 ASN 120 120 120 ASN ASN AAA . n A 1 121 ARG 121 121 121 ARG ARG AAA . n A 1 122 ASN 122 122 122 ASN ASN AAA . n A 1 123 CYS 123 123 123 CYS CYS AAA . n A 1 124 PRO 124 124 124 PRO PRO AAA . n A 1 125 LYS 125 125 125 LYS LYS AAA . n A 1 126 GLY 126 126 126 GLY GLY AAA . n A 1 127 VAL 127 127 127 VAL VAL AAA . n A 1 128 VAL 128 128 128 VAL VAL AAA . n A 1 129 ALA 129 129 129 ALA ALA AAA . n A 1 130 SER 130 130 130 SER SER AAA . n A 1 131 LEU 131 131 131 LEU LEU AAA . n A 1 132 SER 132 132 132 SER SER AAA . n A 1 133 LEU 133 133 133 LEU LEU AAA . n A 1 134 GLY 134 134 134 GLY GLY AAA . n A 1 135 GLY 135 135 135 GLY GLY AAA . n A 1 136 GLY 136 136 136 GLY GLY AAA . n A 1 137 TYR 137 137 137 TYR TYR AAA . n A 1 138 SER 138 138 138 SER SER AAA . n A 1 139 SER 139 139 139 SER SER AAA . n A 1 140 SER 140 140 140 SER SER AAA . n A 1 141 VAL 141 141 141 VAL VAL AAA . n A 1 142 ASN 142 142 142 ASN ASN AAA . n A 1 143 SER 143 143 143 SER SER AAA . n A 1 144 ALA 144 144 144 ALA ALA AAA . n A 1 145 ALA 145 145 145 ALA ALA AAA . n A 1 146 ALA 146 146 146 ALA ALA AAA . n A 1 147 ARG 147 147 147 ARG ARG AAA . n A 1 148 LEU 148 148 148 LEU LEU AAA . n A 1 149 GLN 149 149 149 GLN GLN AAA . n A 1 150 SER 150 150 150 SER SER AAA . n A 1 151 SER 151 151 151 SER SER AAA . n A 1 152 GLY 152 152 152 GLY GLY AAA . n A 1 153 VAL 153 153 153 VAL VAL AAA . n A 1 154 MET 154 154 154 MET MET AAA . n A 1 155 VAL 155 155 155 VAL VAL AAA . n A 1 156 ALA 156 156 156 ALA ALA AAA . n A 1 157 VAL 157 157 157 VAL VAL AAA . n A 1 158 ALA 158 158 158 ALA ALA AAA . n A 1 159 ALA 159 159 159 ALA ALA AAA . n A 1 160 GLY 160 160 160 GLY GLY AAA . n A 1 161 ASN 161 161 161 ASN ASN AAA . n A 1 162 ASN 162 162 162 ASN ASN AAA . n A 1 163 ASN 163 163 163 ASN ASN AAA . n A 1 164 ALA 164 164 164 ALA ALA AAA . n A 1 165 ASP 165 165 165 ASP ASP AAA . n A 1 166 ALA 166 166 166 ALA ALA AAA . n A 1 167 ARG 167 167 167 ARG ARG AAA . n A 1 168 ASN 168 168 168 ASN ASN AAA . n A 1 169 TYR 169 169 169 TYR TYR AAA . n A 1 170 SER 170 170 170 SER SER AAA . n A 1 171 PRO 171 171 171 PRO PRO AAA . n A 1 172 ALA 172 172 172 ALA ALA AAA . n A 1 173 SER 173 173 173 SER SER AAA . n A 1 174 GLU 174 174 174 GLU GLU AAA . n A 1 175 PRO 175 175 175 PRO PRO AAA . n A 1 176 SER 176 176 176 SER SER AAA . n A 1 177 VAL 177 177 177 VAL VAL AAA . n A 1 178 CYS 178 178 178 CYS CYS AAA . n A 1 179 THR 179 179 179 THR THR AAA . n A 1 180 VAL 180 180 180 VAL VAL AAA . n A 1 181 GLY 181 181 181 GLY GLY AAA . n A 1 182 ALA 182 182 182 ALA ALA AAA . n A 1 183 SER 183 183 183 SER SER AAA . n A 1 184 ASP 184 184 184 ASP ASP AAA . n A 1 185 ARG 185 185 185 ARG ARG AAA . n A 1 186 TYR 186 186 186 TYR TYR AAA . n A 1 187 ASP 187 187 187 ASP ASP AAA . n A 1 188 ARG 188 188 188 ARG ARG AAA . n A 1 189 ARG 189 189 189 ARG ARG AAA . n A 1 190 SER 190 190 190 SER SER AAA . n A 1 191 SER 191 191 191 SER SER AAA . n A 1 192 PHE 192 192 192 PHE PHE AAA . n A 1 193 SER 193 193 193 SER SER AAA . n A 1 194 ASN 194 194 194 ASN ASN AAA . n A 1 195 TYR 195 195 195 TYR TYR AAA . n A 1 196 GLY 196 196 196 GLY GLY AAA . n A 1 197 SER 197 197 197 SER SER AAA . n A 1 198 VAL 198 198 198 VAL VAL AAA . n A 1 199 LEU 199 199 199 LEU LEU AAA . n A 1 200 ASP 200 200 200 ASP ASP AAA . n A 1 201 ILE 201 201 201 ILE ILE AAA . n A 1 202 PHE 202 202 202 PHE PHE AAA . n A 1 203 GLY 203 203 203 GLY GLY AAA . n A 1 204 PRO 204 204 204 PRO PRO AAA . n A 1 205 GLY 205 205 205 GLY GLY AAA . n A 1 206 THR 206 206 206 THR THR AAA . n A 1 207 ASP 207 207 207 ASP ASP AAA . n A 1 208 ILE 208 208 208 ILE ILE AAA . n A 1 209 LEU 209 209 209 LEU LEU AAA . n A 1 210 SER 210 210 210 SER SER AAA . n A 1 211 THR 211 211 211 THR THR AAA . n A 1 212 TRP 212 212 212 TRP TRP AAA . n A 1 213 ILE 213 213 213 ILE ILE AAA . n A 1 214 GLY 214 214 214 GLY GLY AAA . n A 1 215 GLY 215 215 215 GLY GLY AAA . n A 1 216 SER 216 216 216 SER SER AAA . n A 1 217 THR 217 217 217 THR THR AAA . n A 1 218 ARG 218 218 218 ARG ARG AAA . n A 1 219 SER 219 219 219 SER SER AAA . n A 1 220 ILE 220 220 220 ILE ILE AAA . n A 1 221 SER 221 221 221 SER SER AAA . n A 1 222 GLY 222 222 222 GLY GLY AAA . n A 1 223 THR 223 223 223 THR THR AAA . n A 1 224 SER 224 224 224 SER SER AAA . n A 1 225 MET 225 225 225 MET MET AAA . n A 1 226 ALA 226 226 226 ALA ALA AAA . n A 1 227 THR 227 227 227 THR THR AAA . n A 1 228 PRO 228 228 228 PRO PRO AAA . n A 1 229 HIS 229 229 229 HIS HIS AAA . n A 1 230 VAL 230 230 230 VAL VAL AAA . n A 1 231 ALA 231 231 231 ALA ALA AAA . n A 1 232 GLY 232 232 232 GLY GLY AAA . n A 1 233 LEU 233 233 233 LEU LEU AAA . n A 1 234 ALA 234 234 234 ALA ALA AAA . n A 1 235 ALA 235 235 235 ALA ALA AAA . n A 1 236 TYR 236 236 236 TYR TYR AAA . n A 1 237 LEU 237 237 237 LEU LEU AAA . n A 1 238 MET 238 238 238 MET MET AAA . n A 1 239 THR 239 239 239 THR THR AAA . n A 1 240 LEU 240 240 240 LEU LEU AAA . n A 1 241 GLY 241 241 241 GLY GLY AAA . n A 1 242 LYS 242 242 242 LYS LYS AAA . n A 1 243 THR 243 243 243 THR THR AAA . n A 1 244 THR 244 244 244 THR THR AAA . n A 1 245 ALA 245 245 245 ALA ALA AAA . n A 1 246 ALA 246 246 246 ALA ALA AAA . n A 1 247 SER 247 247 247 SER SER AAA . n A 1 248 ALA 248 248 248 ALA ALA AAA . n A 1 249 CYS 249 249 249 CYS CYS AAA . n A 1 250 ARG 250 250 250 ARG ARG AAA . n A 1 251 TYR 251 251 251 TYR TYR AAA . n A 1 252 ILE 252 252 252 ILE ILE AAA . n A 1 253 ALA 253 253 253 ALA ALA AAA . n A 1 254 ASP 254 254 254 ASP ASP AAA . n A 1 255 THR 255 255 255 THR THR AAA . n A 1 256 ALA 256 256 256 ALA ALA AAA . n A 1 257 ASN 257 257 257 ASN ASN AAA . n A 1 258 LYS 258 258 258 LYS LYS AAA . n A 1 259 GLY 259 259 259 GLY GLY AAA . n A 1 260 ASP 260 260 260 ASP ASP AAA . n A 1 261 LEU 261 261 261 LEU LEU AAA . n A 1 262 SER 262 262 262 SER SER AAA . n A 1 263 ASN 263 263 263 ASN ASN AAA . n A 1 264 ILE 264 264 264 ILE ILE AAA . n A 1 265 PRO 265 265 265 PRO PRO AAA . n A 1 266 PHE 266 266 266 PHE PHE AAA . n A 1 267 GLY 267 267 267 GLY GLY AAA . n A 1 268 THR 268 268 268 THR THR AAA . n A 1 269 VAL 269 269 269 VAL VAL AAA . n A 1 270 ASN 270 270 270 ASN ASN AAA . n A 1 271 LEU 271 271 271 LEU LEU AAA . n A 1 272 LEU 272 272 272 LEU LEU AAA . n A 1 273 ALA 273 273 273 ALA ALA AAA . n A 1 274 TYR 274 274 274 TYR TYR AAA . n A 1 275 ASN 275 275 275 ASN ASN AAA . n A 1 276 ASN 276 276 276 ASN ASN AAA . n A 1 277 TYR 277 277 277 TYR TYR AAA . n A 1 278 GLN 278 278 278 GLN GLN AAA . n A 1 279 ALA 279 279 279 ALA ALA AAA . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 401 401 CA CA AAA . C 3 HOH 1 501 26 HOH HOH AAA . C 3 HOH 2 502 5 HOH HOH AAA . C 3 HOH 3 503 7 HOH HOH AAA . C 3 HOH 4 504 21 HOH HOH AAA . C 3 HOH 5 505 23 HOH HOH AAA . C 3 HOH 6 506 17 HOH HOH AAA . C 3 HOH 7 507 24 HOH HOH AAA . C 3 HOH 8 508 14 HOH HOH AAA . C 3 HOH 9 509 8 HOH HOH AAA . C 3 HOH 10 510 18 HOH HOH AAA . C 3 HOH 11 511 6 HOH HOH AAA . C 3 HOH 12 512 3 HOH HOH AAA . C 3 HOH 13 513 19 HOH HOH AAA . C 3 HOH 14 514 12 HOH HOH AAA . C 3 HOH 15 515 10 HOH HOH AAA . C 3 HOH 16 516 1 HOH HOH AAA . C 3 HOH 17 517 2 HOH HOH AAA . C 3 HOH 18 518 15 HOH HOH AAA . C 3 HOH 19 519 22 HOH HOH AAA . C 3 HOH 20 520 20 HOH HOH AAA . C 3 HOH 21 521 16 HOH HOH AAA . C 3 HOH 22 522 25 HOH HOH AAA . C 3 HOH 23 523 11 HOH HOH AAA . C 3 HOH 24 524 9 HOH HOH AAA . C 3 HOH 25 525 4 HOH HOH AAA . C 3 HOH 26 526 13 HOH HOH AAA . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0258 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DIALS ? ? ? 1.10 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.7.1 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.8.2 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6ZEU _cell.details ? _cell.formula_units_Z ? _cell.length_a 67.331 _cell.length_a_esd ? _cell.length_b 67.331 _cell.length_b_esd ? _cell.length_c 106.878 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZEU _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6ZEU _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON CRYSTALLOGRAPHY' _exptl.method_details ? # _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.Rmerge_I_obs 1.3 _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.06 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_sigI_obs 1.8 _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_gt ? _reflns_shell.number_measured_obs 10323 _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_gt ? _reflns_shell.number_unique_obs 1139 _reflns_shell.pdbx_CC_half 0.611 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_Rpim_I_all 0.627 _reflns_shell.pdbx_Rrim_I_all 1.450 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 1.07 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_redundancy 9.1 _reflns_shell.pdbx_rejects ? _reflns_shell.percent_possible_all 92.4 _reflns_shell.percent_possible_gt ? _reflns_shell.percent_possible_obs ? # _refine.aniso_B[1][1] -0.418 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][2] -0.418 _refine.aniso_B[2][3] 0.000 _refine.aniso_B[3][3] 0.836 _refine.B_iso_max ? _refine.B_iso_mean 16.430 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.941 _refine.correlation_coeff_Fo_to_Fc_free 0.914 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6ZEU _refine.pdbx_refine_id 'ELECTRON CRYSTALLOGRAPHY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.004 _refine.ls_d_res_low 57.034 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 15759 _refine.ls_number_reflns_R_free 793 _refine.ls_number_reflns_R_work 14966 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 91.825 _refine.ls_percent_reflns_R_free 5.032 _refine.ls_R_factor_all 0.201 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.2343 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1991 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free 0.209 _refine.ls_wR_factor_R_work 0.180 _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 2ID8 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details 'Random selection' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.234 _refine.pdbx_overall_ESU_R_Free 0.183 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work 0.9150 _refine.pdbx_average_fsc_free 0.8925 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON CRYSTALLOGRAPHY' ? 0.043 0.012 2105 ? r_bond_refined_d ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 1.509 1.631 2869 ? r_angle_refined_deg ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 5.049 5.000 286 ? r_dihedral_angle_1_deg ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 34.271 21.939 98 ? r_dihedral_angle_2_deg ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 13.967 15.000 305 ? r_dihedral_angle_3_deg ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 16.718 15.000 12 ? r_dihedral_angle_4_deg ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 0.054 0.200 283 ? r_chiral_restr ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 0.003 0.020 1645 ? r_gen_planes_refined ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 0.206 0.200 1144 ? r_nbd_refined ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 0.316 0.200 1486 ? r_nbtor_refined ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 0.142 0.200 112 ? r_xyhbond_nbd_refined ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 0.201 0.200 40 ? r_symmetry_nbd_refined ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 0.277 0.200 6 ? r_symmetry_xyhbond_nbd_refined ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 2.646 1.424 1123 ? r_mcbond_it ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 3.124 2.140 1404 ? r_mcangle_it ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 4.714 1.823 982 ? r_scbond_it ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 5.529 2.562 1461 ? r_scangle_it ? ? 'ELECTRON CRYSTALLOGRAPHY' ? 5.677 21.038 3443 ? r_lrange_it ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'ELECTRON CRYSTALLOGRAPHY' 2.004 2.056 . . 56 1084 91.7136 . . . 0.255 . 0.246 . . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 2.056 2.113 . . 59 1052 92.6606 . . . 0.275 . 0.237 . . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 2.113 2.174 . . 52 1043 92.0168 . . . 0.356 . 0.239 . . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 2.174 2.241 . . 51 980 91.8077 . . . 0.280 . 0.221 . . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 2.241 2.314 . . 56 980 92.1708 . . . 0.280 . 0.241 . . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 2.314 2.395 . . 51 938 92.1715 . . . 0.280 . 0.234 . . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 2.395 2.486 . . 48 901 91.6908 . . . 0.375 . 0.223 . . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 2.486 2.587 . . 54 872 92.5075 . . . 0.320 . 0.235 . . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 2.587 2.702 . . 47 846 91.7780 . . . 0.234 . 0.229 . . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 2.702 2.834 . . 43 803 92.0566 . . . 0.268 . 0.212 . . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 2.834 2.987 . . 39 770 91.6195 . . . 0.289 . 0.210 . . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 2.987 3.168 . . 32 746 92.0710 . . . 0.274 . 0.196 . . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 3.168 3.387 . . 43 685 91.9192 . . . 0.235 . 0.184 . . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 3.387 3.658 . . 35 646 91.9028 . . . 0.164 . 0.160 . . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 3.658 4.006 . . 34 598 91.5942 . . . 0.165 . 0.159 . . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 4.006 4.479 . . 35 550 91.6928 . . . 0.123 . 0.149 . . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 4.479 5.170 . . 13 499 91.7563 . . . 0.119 . 0.138 . . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 5.170 6.328 . . 20 423 90.9651 . . . 0.153 . 0.187 . . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 6.328 8.934 . . 12 344 90.8163 . . . 0.188 . 0.169 . . . . . . . . . . . 'ELECTRON CRYSTALLOGRAPHY' 8.934 57.034 . . 13 206 89.7541 . . . 0.316 . 0.258 . . . . . . . . . . . # _struct.entry_id 6ZEU _struct.title 'Crystal structure of proteinase K lamella by electron diffraction with a 50 micrometre C2 condenser aperture' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6ZEU _struct_keywords.text 'Protease, Serine protease, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PRTK_PARAQ _struct_ref.pdbx_db_accession P06873 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AAQTNAPWGLARISSTSPGTSTYYYDESAGQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYSSRDGNGHGTHCAGTVGSR TYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGGYSSSVNSAAARLQSSGVMVAVAAG NNNADARNYSPASEPSVCTVGASDRYDRRSSFSNYGSVLDIFGPGTSILSTWIGGSTRSISGTSMATPHVAGLAAYLMTL GKTTAASACRYIADTANKGDLSNIPFGTVNLLAYNNYQA ; _struct_ref.pdbx_align_begin 106 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6ZEU _struct_ref_seq.pdbx_strand_id AAA _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 279 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P06873 _struct_ref_seq.db_align_beg 106 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 384 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 279 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 6ZEU _struct_ref_seq_dif.mon_id ASP _struct_ref_seq_dif.pdbx_pdb_strand_id AAA _struct_ref_seq_dif.seq_num 207 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P06873 _struct_ref_seq_dif.db_mon_id SER _struct_ref_seq_dif.pdbx_seq_db_seq_num 312 _struct_ref_seq_dif.details conflict _struct_ref_seq_dif.pdbx_auth_seq_num 207 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 90 ? 1 MORE -12 ? 1 'SSA (A^2)' 10020 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 7 ? SER A 14 ? PRO AAA 7 SER AAA 14 1 ? 8 HELX_P HELX_P2 AA2 HIS A 46 ? GLU A 50 ? HIS AAA 46 GLU AAA 50 5 ? 5 HELX_P HELX_P3 AA3 GLY A 68 ? SER A 79 ? GLY AAA 68 SER AAA 79 1 ? 12 HELX_P HELX_P4 AA4 GLN A 103 ? LYS A 118 ? GLN AAA 103 LYS AAA 118 1 ? 16 HELX_P HELX_P5 AA5 ASN A 119 ? ARG A 121 ? ASN AAA 119 ARG AAA 121 5 ? 3 HELX_P HELX_P6 AA6 SER A 138 ? SER A 151 ? SER AAA 138 SER AAA 151 1 ? 14 HELX_P HELX_P7 AA7 ASP A 165 ? ARG A 167 ? ASP AAA 165 ARG AAA 167 5 ? 3 HELX_P HELX_P8 AA8 GLY A 222 ? LEU A 240 ? GLY AAA 222 LEU AAA 240 1 ? 19 HELX_P HELX_P9 AA9 THR A 244 ? THR A 255 ? THR AAA 244 THR AAA 255 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 34 SG B ? ? 1_555 A CYS 123 SG ? ? AAA CYS 34 AAA CYS 123 1_555 ? ? ? ? ? ? ? 2.041 ? ? disulf2 disulf ? ? A CYS 178 SG A ? ? 1_555 A CYS 249 SG ? ? AAA CYS 178 AAA CYS 249 1_555 ? ? ? ? ? ? ? 2.038 ? ? metalc1 metalc ? ? A PRO 175 O ? ? ? 1_555 B CA . CA ? ? AAA PRO 175 AAA CA 401 1_555 ? ? ? ? ? ? ? 2.420 ? ? metalc2 metalc ? ? A VAL 177 O ? ? ? 1_555 B CA . CA ? ? AAA VAL 177 AAA CA 401 1_555 ? ? ? ? ? ? ? 2.449 ? ? metalc3 metalc ? ? A ASP 200 OD1 ? ? ? 1_555 B CA . CA ? ? AAA ASP 200 AAA CA 401 1_555 ? ? ? ? ? ? ? 2.544 ? ? metalc4 metalc ? ? A ASP 200 OD2 ? ? ? 1_555 B CA . CA ? ? AAA ASP 200 AAA CA 401 1_555 ? ? ? ? ? ? ? 2.556 ? ? metalc5 metalc ? ? B CA . CA ? ? ? 1_555 C HOH . O ? ? AAA CA 401 AAA HOH 514 1_555 ? ? ? ? ? ? ? 2.570 ? ? metalc6 metalc ? ? B CA . CA ? ? ? 1_555 C HOH . O ? ? AAA CA 401 AAA HOH 516 1_555 ? ? ? ? ? ? ? 2.782 ? ? metalc7 metalc ? ? B CA . CA ? ? ? 1_555 C HOH . O ? ? AAA CA 401 AAA HOH 526 1_555 ? ? ? ? ? ? ? 2.490 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A PRO 175 ? AAA PRO 175 ? 1_555 CA ? B CA . ? AAA CA 401 ? 1_555 O ? A VAL 177 ? AAA VAL 177 ? 1_555 82.8 ? 2 O ? A PRO 175 ? AAA PRO 175 ? 1_555 CA ? B CA . ? AAA CA 401 ? 1_555 OD1 ? A ASP 200 ? AAA ASP 200 ? 1_555 153.1 ? 3 O ? A VAL 177 ? AAA VAL 177 ? 1_555 CA ? B CA . ? AAA CA 401 ? 1_555 OD1 ? A ASP 200 ? AAA ASP 200 ? 1_555 124.0 ? 4 O ? A PRO 175 ? AAA PRO 175 ? 1_555 CA ? B CA . ? AAA CA 401 ? 1_555 OD2 ? A ASP 200 ? AAA ASP 200 ? 1_555 152.8 ? 5 O ? A VAL 177 ? AAA VAL 177 ? 1_555 CA ? B CA . ? AAA CA 401 ? 1_555 OD2 ? A ASP 200 ? AAA ASP 200 ? 1_555 77.3 ? 6 OD1 ? A ASP 200 ? AAA ASP 200 ? 1_555 CA ? B CA . ? AAA CA 401 ? 1_555 OD2 ? A ASP 200 ? AAA ASP 200 ? 1_555 50.9 ? 7 O ? A PRO 175 ? AAA PRO 175 ? 1_555 CA ? B CA . ? AAA CA 401 ? 1_555 O ? C HOH . ? AAA HOH 514 ? 1_555 102.5 ? 8 O ? A VAL 177 ? AAA VAL 177 ? 1_555 CA ? B CA . ? AAA CA 401 ? 1_555 O ? C HOH . ? AAA HOH 514 ? 1_555 136.4 ? 9 OD1 ? A ASP 200 ? AAA ASP 200 ? 1_555 CA ? B CA . ? AAA CA 401 ? 1_555 O ? C HOH . ? AAA HOH 514 ? 1_555 61.2 ? 10 OD2 ? A ASP 200 ? AAA ASP 200 ? 1_555 CA ? B CA . ? AAA CA 401 ? 1_555 O ? C HOH . ? AAA HOH 514 ? 1_555 80.4 ? 11 O ? A PRO 175 ? AAA PRO 175 ? 1_555 CA ? B CA . ? AAA CA 401 ? 1_555 O ? C HOH . ? AAA HOH 516 ? 1_555 80.8 ? 12 O ? A VAL 177 ? AAA VAL 177 ? 1_555 CA ? B CA . ? AAA CA 401 ? 1_555 O ? C HOH . ? AAA HOH 516 ? 1_555 59.8 ? 13 OD1 ? A ASP 200 ? AAA ASP 200 ? 1_555 CA ? B CA . ? AAA CA 401 ? 1_555 O ? C HOH . ? AAA HOH 516 ? 1_555 113.3 ? 14 OD2 ? A ASP 200 ? AAA ASP 200 ? 1_555 CA ? B CA . ? AAA CA 401 ? 1_555 O ? C HOH . ? AAA HOH 516 ? 1_555 73.2 ? 15 O ? C HOH . ? AAA HOH 514 ? 1_555 CA ? B CA . ? AAA CA 401 ? 1_555 O ? C HOH . ? AAA HOH 516 ? 1_555 78.1 ? 16 O ? A PRO 175 ? AAA PRO 175 ? 1_555 CA ? B CA . ? AAA CA 401 ? 1_555 O ? C HOH . ? AAA HOH 526 ? 1_555 85.7 ? 17 O ? A VAL 177 ? AAA VAL 177 ? 1_555 CA ? B CA . ? AAA CA 401 ? 1_555 O ? C HOH . ? AAA HOH 526 ? 1_555 81.6 ? 18 OD1 ? A ASP 200 ? AAA ASP 200 ? 1_555 CA ? B CA . ? AAA CA 401 ? 1_555 O ? C HOH . ? AAA HOH 526 ? 1_555 95.2 ? 19 OD2 ? A ASP 200 ? AAA ASP 200 ? 1_555 CA ? B CA . ? AAA CA 401 ? 1_555 O ? C HOH . ? AAA HOH 526 ? 1_555 109.1 ? 20 O ? C HOH . ? AAA HOH 514 ? 1_555 CA ? B CA . ? AAA CA 401 ? 1_555 O ? C HOH . ? AAA HOH 526 ? 1_555 141.5 ? 21 O ? C HOH . ? AAA HOH 516 ? 1_555 CA ? B CA . ? AAA CA 401 ? 1_555 O ? C HOH . ? AAA HOH 526 ? 1_555 140.3 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 170 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 170 _struct_mon_prot_cis.auth_asym_id AAA _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 171 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 171 _struct_mon_prot_cis.pdbx_auth_asym_id_2 AAA _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.04 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 7 ? AA3 ? 2 ? AA4 ? 2 ? AA5 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? parallel AA2 5 6 ? parallel AA2 6 7 ? parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA A 2 ? GLN A 3 ? ALA AAA 2 GLN AAA 3 AA1 2 TYR A 23 ? TYR A 24 ? TYR AAA 23 TYR AAA 24 AA2 1 ALA A 53 ? THR A 58 ? ALA AAA 53 THR AAA 58 AA2 2 GLN A 89 ? LYS A 94 ? GLN AAA 89 LYS AAA 94 AA2 3 SER A 33 ? ASP A 39 ? SER AAA 33 ASP AAA 39 AA2 4 GLY A 126 ? LEU A 131 ? GLY AAA 126 LEU AAA 131 AA2 5 VAL A 153 ? ALA A 158 ? VAL AAA 153 ALA AAA 158 AA2 6 CYS A 178 ? SER A 183 ? CYS AAA 178 SER AAA 183 AA2 7 ILE A 201 ? PRO A 204 ? ILE AAA 201 PRO AAA 204 AA3 1 GLY A 135 ? GLY A 136 ? GLY AAA 135 GLY AAA 136 AA3 2 TYR A 169 ? SER A 170 ? TYR AAA 169 SER AAA 170 AA4 1 ILE A 208 ? THR A 211 ? ILE AAA 208 THR AAA 211 AA4 2 THR A 217 ? ILE A 220 ? THR AAA 217 ILE AAA 220 AA5 1 ASN A 257 ? LYS A 258 ? ASN AAA 257 LYS AAA 258 AA5 2 LEU A 271 ? LEU A 272 ? LEU AAA 271 LEU AAA 272 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLN A 3 ? N GLN AAA 3 O TYR A 23 ? O TYR AAA 23 AA2 1 2 N GLN A 54 ? N GLN AAA 54 O GLY A 92 ? O GLY AAA 92 AA2 2 3 O PHE A 91 ? O PHE AAA 91 N VAL A 37 ? N VAL AAA 37 AA2 3 4 N TYR A 36 ? N TYR AAA 36 O VAL A 128 ? O VAL AAA 128 AA2 4 5 N LEU A 131 ? N LEU AAA 131 O ALA A 156 ? O ALA AAA 156 AA2 5 6 N VAL A 157 ? N VAL AAA 157 O VAL A 180 ? O VAL AAA 180 AA2 6 7 N GLY A 181 ? N GLY AAA 181 O GLY A 203 ? O GLY AAA 203 AA3 1 2 N GLY A 135 ? N GLY AAA 135 O SER A 170 ? O SER AAA 170 AA4 1 2 N ILE A 208 ? N ILE AAA 208 O ILE A 220 ? O ILE AAA 220 AA5 1 2 N ASN A 257 ? N ASN AAA 257 O LEU A 272 ? O LEU AAA 272 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OH _pdbx_validate_close_contact.auth_asym_id_1 AAA _pdbx_validate_close_contact.auth_comp_id_1 TYR _pdbx_validate_close_contact.auth_seq_id_1 25 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 AAA _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 501 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.10 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP AAA 39 ? ? -159.22 -134.82 2 1 ASN AAA 270 ? ? -109.93 72.69 # _pdbx_entry_details.entry_id 6ZEU _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N # _em_3d_fitting.entry_id 6ZEU _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol ? _em_3d_fitting.ref_space RECIPROCAL _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.id 1 _em_3d_fitting_list.details ? _em_3d_fitting_list.pdb_chain_id ? _em_3d_fitting_list.pdb_chain_residue_range ? _em_3d_fitting_list.pdb_entry_id 2ID8 _em_3d_fitting_list.initial_refinement_model_id 1 _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name PDB _em_3d_fitting_list.type 'experimental model' _em_3d_fitting_list.accession_code 2ID8 # _em_3d_reconstruction.entry_id 6ZEU _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles ? _em_3d_reconstruction.resolution ? _em_3d_reconstruction.resolution_method 'DIFFRACTION PATTERN/LAYERLINES' _em_3d_reconstruction.symmetry_type '3D CRYSTAL' _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 7.5 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.details ? _em_entity_assembly.entity_id_list ? _em_entity_assembly.id 1 _em_entity_assembly.name 'proteinase K' _em_entity_assembly.oligomeric_details ? _em_entity_assembly.parent_id 0 _em_entity_assembly.source 'MULTIPLE SOURCES' _em_entity_assembly.synonym ? _em_entity_assembly.type COMPLEX # _em_image_scans.entry_id 6ZEU _em_image_scans.id 2 _em_image_scans.dimension_height 2048 _em_image_scans.dimension_width 2048 _em_image_scans.frames_per_image ? _em_image_scans.image_recording_id 2 _em_image_scans.sampling_size 28 _em_image_scans.scanner_model ? _em_image_scans.used_frames_per_image ? _em_image_scans.citation_id ? _em_image_scans.number_digital_images ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.details ? # _em_imaging.id 1 _em_imaging.entry_id 6ZEU _em_imaging.accelerating_voltage 200 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter 50.0 _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen ? _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TALOS ARCTICA' _em_imaging.mode DIFFRACTION _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max ? _em_imaging.nominal_defocus_min ? _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date 2018-04-20 _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.method ? _em_sample_support.film_material ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature 293.15 _em_vitrification.cryogen_name ETHANE _em_vitrification.details 'Excess liquid was removed by blotting for 4-6s with a Vitrobot' _em_vitrification.humidity 100 _em_vitrification.instrument ? _em_vitrification.entry_id 6ZEU _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 6ZEU _em_experiment.id 1 _em_experiment.aggregation_state '3D ARRAY' _em_experiment.reconstruction_method CRYSTALLOGRAPHY _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MET N N N N 231 MET CA C N S 232 MET C C N N 233 MET O O N N 234 MET CB C N N 235 MET CG C N N 236 MET SD S N N 237 MET CE C N N 238 MET OXT O N N 239 MET H H N N 240 MET H2 H N N 241 MET HA H N N 242 MET HB2 H N N 243 MET HB3 H N N 244 MET HG2 H N N 245 MET HG3 H N N 246 MET HE1 H N N 247 MET HE2 H N N 248 MET HE3 H N N 249 MET HXT H N N 250 PHE N N N N 251 PHE CA C N S 252 PHE C C N N 253 PHE O O N N 254 PHE CB C N N 255 PHE CG C Y N 256 PHE CD1 C Y N 257 PHE CD2 C Y N 258 PHE CE1 C Y N 259 PHE CE2 C Y N 260 PHE CZ C Y N 261 PHE OXT O N N 262 PHE H H N N 263 PHE H2 H N N 264 PHE HA H N N 265 PHE HB2 H N N 266 PHE HB3 H N N 267 PHE HD1 H N N 268 PHE HD2 H N N 269 PHE HE1 H N N 270 PHE HE2 H N N 271 PHE HZ H N N 272 PHE HXT H N N 273 PRO N N N N 274 PRO CA C N S 275 PRO C C N N 276 PRO O O N N 277 PRO CB C N N 278 PRO CG C N N 279 PRO CD C N N 280 PRO OXT O N N 281 PRO H H N N 282 PRO HA H N N 283 PRO HB2 H N N 284 PRO HB3 H N N 285 PRO HG2 H N N 286 PRO HG3 H N N 287 PRO HD2 H N N 288 PRO HD3 H N N 289 PRO HXT H N N 290 SER N N N N 291 SER CA C N S 292 SER C C N N 293 SER O O N N 294 SER CB C N N 295 SER OG O N N 296 SER OXT O N N 297 SER H H N N 298 SER H2 H N N 299 SER HA H N N 300 SER HB2 H N N 301 SER HB3 H N N 302 SER HG H N N 303 SER HXT H N N 304 THR N N N N 305 THR CA C N S 306 THR C C N N 307 THR O O N N 308 THR CB C N R 309 THR OG1 O N N 310 THR CG2 C N N 311 THR OXT O N N 312 THR H H N N 313 THR H2 H N N 314 THR HA H N N 315 THR HB H N N 316 THR HG1 H N N 317 THR HG21 H N N 318 THR HG22 H N N 319 THR HG23 H N N 320 THR HXT H N N 321 TRP N N N N 322 TRP CA C N S 323 TRP C C N N 324 TRP O O N N 325 TRP CB C N N 326 TRP CG C Y N 327 TRP CD1 C Y N 328 TRP CD2 C Y N 329 TRP NE1 N Y N 330 TRP CE2 C Y N 331 TRP CE3 C Y N 332 TRP CZ2 C Y N 333 TRP CZ3 C Y N 334 TRP CH2 C Y N 335 TRP OXT O N N 336 TRP H H N N 337 TRP H2 H N N 338 TRP HA H N N 339 TRP HB2 H N N 340 TRP HB3 H N N 341 TRP HD1 H N N 342 TRP HE1 H N N 343 TRP HE3 H N N 344 TRP HZ2 H N N 345 TRP HZ3 H N N 346 TRP HH2 H N N 347 TRP HXT H N N 348 TYR N N N N 349 TYR CA C N S 350 TYR C C N N 351 TYR O O N N 352 TYR CB C N N 353 TYR CG C Y N 354 TYR CD1 C Y N 355 TYR CD2 C Y N 356 TYR CE1 C Y N 357 TYR CE2 C Y N 358 TYR CZ C Y N 359 TYR OH O N N 360 TYR OXT O N N 361 TYR H H N N 362 TYR H2 H N N 363 TYR HA H N N 364 TYR HB2 H N N 365 TYR HB3 H N N 366 TYR HD1 H N N 367 TYR HD2 H N N 368 TYR HE1 H N N 369 TYR HE2 H N N 370 TYR HH H N N 371 TYR HXT H N N 372 VAL N N N N 373 VAL CA C N S 374 VAL C C N N 375 VAL O O N N 376 VAL CB C N N 377 VAL CG1 C N N 378 VAL CG2 C N N 379 VAL OXT O N N 380 VAL H H N N 381 VAL H2 H N N 382 VAL HA H N N 383 VAL HB H N N 384 VAL HG11 H N N 385 VAL HG12 H N N 386 VAL HG13 H N N 387 VAL HG21 H N N 388 VAL HG22 H N N 389 VAL HG23 H N N 390 VAL HXT H N N 391 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _em_3d_crystal_entity.id 1 _em_3d_crystal_entity.image_processing_id 1 _em_3d_crystal_entity.angle_alpha 90 _em_3d_crystal_entity.angle_beta 90 _em_3d_crystal_entity.angle_gamma 90 _em_3d_crystal_entity.length_a 67.3308 _em_3d_crystal_entity.length_b 67.3308 _em_3d_crystal_entity.length_c 106.8780 _em_3d_crystal_entity.space_group_name P43212 _em_3d_crystal_entity.space_group_num 96 # _em_buffer_component.buffer_id 1 _em_buffer_component.id 1 _em_buffer_component.concentration 25 _em_buffer_component.concentration_units mM _em_buffer_component.formula ? _em_buffer_component.name Tris # _em_crystal_formation.id 1 _em_crystal_formation.specimen_id 1 _em_crystal_formation.atmosphere ? _em_crystal_formation.details ? _em_crystal_formation.instrument ? _em_crystal_formation.lipid_mixture ? _em_crystal_formation.lipid_protein_ratio ? _em_crystal_formation.temperature ? _em_crystal_formation.time ? _em_crystal_formation.time_unit ? # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type NONE _em_ctf_correction.details ? # _em_diffraction.id 1 _em_diffraction.camera_length 1350 _em_diffraction.imaging_id 1 _em_diffraction.tilt_angle_list ? # _em_diffraction_stats.id 1 _em_diffraction_stats.details ? _em_diffraction_stats.image_processing_id 1 _em_diffraction_stats.fourier_space_coverage 93 _em_diffraction_stats.high_resolution 2.0 _em_diffraction_stats.num_intensities_measured 139242 _em_diffraction_stats.num_structure_factors 15787 _em_diffraction_stats.overall_phase_error 0.0 _em_diffraction_stats.overall_phase_residual 0.1 _em_diffraction_stats.phase_error_rejection_criteria none _em_diffraction_stats.r_merge 0.303 _em_diffraction_stats.r_sym 0.303 # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # loop_ _em_image_recording.id _em_image_recording.imaging_id _em_image_recording.avg_electron_dose_per_image _em_image_recording.average_exposure_time _em_image_recording.details _em_image_recording.detector_mode _em_image_recording.film_or_detector_model _em_image_recording.num_diffraction_images _em_image_recording.num_grids_imaged _em_image_recording.num_real_images 1 1 0.034 0.85 'The images were recorded using a Ceta-D detector operated in rolling-shutter mode with 2x2 binning.' ? OTHER 122 1 ? 2 1 0.034 0.85 'The images were recorded using a Ceta-D detector operated in rolling-shutter mode with 2x2 binning.' ? OTHER 78 1 ? # _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_name ? _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.energyfilter_slit_width ? _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'SERIES ALIGNMENT' ? ? ? 1 1 1 2 MASKING ? ? ? ? ? ? 3 'CTF CORRECTION' ? ? ? 1 ? ? 4 'LAYERLINE INDEXING' ? ? ? ? ? ? 5 'DIFFRACTION INDEXING' ? ? ? ? ? ? 6 'MODEL FITTING' ? ? ? ? 1 ? 7 OTHER ? ? ? ? ? ? 8 'MODEL REFINEMENT' ? REFMAC 5.8.0258 ? 1 ? 9 'MOLECULAR REPLACEMENT' ? Phaser 2.8.2 1 ? ? 10 'LATTICE DISTORTION CORRECTION' ? ? ? 1 ? ? 11 'SYMMETRY DETERMINATION' ? POINTLESS 1.11.12 1 ? ? 12 'CRYSTALLOGRAPHY MERGING' ? AIMLESS 0.7.1 1 ? ? 13 RECONSTRUCTION ? ? ? 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration 50 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Wellcome Trust' 'United Kingdom' 206422/Z/17/Z 1 'Biotechnology and Biological Sciences Research Council (BBSRC)' 'United Kingdom' BB/S003339/1 2 'Wellcome Trust' 'United Kingdom' 202933/Z/16/Z 3 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2ID8 # _pdbx_related_exp_data_set.data_reference 10.5281/zenodo.4121941 _pdbx_related_exp_data_set.data_set_type 'diffraction image data' _pdbx_related_exp_data_set.details ? _pdbx_related_exp_data_set.metadata_reference ? _pdbx_related_exp_data_set.ordinal 1 # _atom_sites.entry_id 6ZEU _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.014852 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014852 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009356 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c C 2.310 20.844 1.020 10.208 1.589 0.569 0.865 51.651 0.216 CA 8.627 10.442 7.387 0.660 1.590 85.748 1.021 178.437 1.675 H 0.493 10.511 0.323 26.126 0.140 3.142 0.041 57.800 0.003 N 12.222 0.006 3.135 9.893 2.014 28.997 1.167 0.583 -11.538 O 3.049 13.277 2.287 5.701 1.546 0.324 0.867 32.909 0.251 S 6.905 1.468 5.203 22.215 1.438 0.254 1.586 56.172 1.056 # loop_