data_6ZM9 # _entry.id 6ZM9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6ZM9 pdb_00006zm9 10.2210/pdb6zm9/pdb WWPDB D_1292104507 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-02-24 2 'Structure model' 1 1 2024-05-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6ZM9 _pdbx_database_status.recvd_initial_deposition_date 2020-07-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name SASBDB _pdbx_database_related.details 'Svi3-3 in presence of SAM (in complex with MTA after catalysis)' _pdbx_database_related.db_id SASDJ65 _pdbx_database_related.content_type 'associated SAS data' # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Guo, X.' 1 0000-0001-8093-9437 'Kanchugal P, S.' 2 0000-0001-5127-9695 'Selmer, M.' 3 0000-0001-9079-2774 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Elife _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2050-084X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 10 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structure and mechanism of a phage-encoded SAM lyase revises catalytic function of enzyme family.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.7554/eLife.61818 _citation.pdbx_database_id_PubMed 33567250 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Guo, X.' 1 ? primary 'Soderholm, A.' 2 0000-0003-3444-5203 primary 'Kanchugal P, S.' 3 0000-0001-5127-9695 primary 'Isaksen, G.V.' 4 0000-0001-7828-7652 primary 'Warsi, O.' 5 ? primary 'Eckhard, U.' 6 0000-0001-5863-4514 primary 'Triguis, S.' 7 ? primary 'Gogoll, A.' 8 0000-0002-9092-261X primary 'Jerlstrom-Hultqvist, J.' 9 ? primary 'Aqvist, J.' 10 ? primary 'Andersson, D.I.' 11 0000-0001-6640-2174 primary 'Selmer, M.' 12 0000-0001-9079-2774 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Chains: A' 16303.464 1 ? ? ? ? 2 non-polymer syn 'PHOSPHATE ION' 94.971 2 ? ? ? ? 3 non-polymer nat 'SODIUM ION' 22.990 1 ? ? ? ? 4 non-polymer syn PROLINE 115.130 1 ? ? ? ? 5 non-polymer syn "5'-DEOXY-5'-METHYLTHIOADENOSINE" 297.334 1 ? ? ? ? 6 water nat water 18.015 123 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SLMERLGGGGFSARIFVGLNVGDKPTYTIEDVVKDTIAIRKRQGILPDASFVAQRGVYTEQRSGQLVTENSVQIIIIDLE GLSKEDFTGKVQALGKELREDFKQESVIVEIQERGIVQDVYSITAEWYEEGPMRPLRVDLQPSLIS ; _entity_poly.pdbx_seq_one_letter_code_can ;SLMERLGGGGFSARIFVGLNVGDKPTYTIEDVVKDTIAIRKRQGILPDASFVAQRGVYTEQRSGQLVTENSVQIIIIDLE GLSKEDFTGKVQALGKELREDFKQESVIVEIQERGIVQDVYSITAEWYEEGPMRPLRVDLQPSLIS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHATE ION' PO4 3 'SODIUM ION' NA 4 PROLINE PRO 5 "5'-DEOXY-5'-METHYLTHIOADENOSINE" MTA 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 LEU n 1 3 MET n 1 4 GLU n 1 5 ARG n 1 6 LEU n 1 7 GLY n 1 8 GLY n 1 9 GLY n 1 10 GLY n 1 11 PHE n 1 12 SER n 1 13 ALA n 1 14 ARG n 1 15 ILE n 1 16 PHE n 1 17 VAL n 1 18 GLY n 1 19 LEU n 1 20 ASN n 1 21 VAL n 1 22 GLY n 1 23 ASP n 1 24 LYS n 1 25 PRO n 1 26 THR n 1 27 TYR n 1 28 THR n 1 29 ILE n 1 30 GLU n 1 31 ASP n 1 32 VAL n 1 33 VAL n 1 34 LYS n 1 35 ASP n 1 36 THR n 1 37 ILE n 1 38 ALA n 1 39 ILE n 1 40 ARG n 1 41 LYS n 1 42 ARG n 1 43 GLN n 1 44 GLY n 1 45 ILE n 1 46 LEU n 1 47 PRO n 1 48 ASP n 1 49 ALA n 1 50 SER n 1 51 PHE n 1 52 VAL n 1 53 ALA n 1 54 GLN n 1 55 ARG n 1 56 GLY n 1 57 VAL n 1 58 TYR n 1 59 THR n 1 60 GLU n 1 61 GLN n 1 62 ARG n 1 63 SER n 1 64 GLY n 1 65 GLN n 1 66 LEU n 1 67 VAL n 1 68 THR n 1 69 GLU n 1 70 ASN n 1 71 SER n 1 72 VAL n 1 73 GLN n 1 74 ILE n 1 75 ILE n 1 76 ILE n 1 77 ILE n 1 78 ASP n 1 79 LEU n 1 80 GLU n 1 81 GLY n 1 82 LEU n 1 83 SER n 1 84 LYS n 1 85 GLU n 1 86 ASP n 1 87 PHE n 1 88 THR n 1 89 GLY n 1 90 LYS n 1 91 VAL n 1 92 GLN n 1 93 ALA n 1 94 LEU n 1 95 GLY n 1 96 LYS n 1 97 GLU n 1 98 LEU n 1 99 ARG n 1 100 GLU n 1 101 ASP n 1 102 PHE n 1 103 LYS n 1 104 GLN n 1 105 GLU n 1 106 SER n 1 107 VAL n 1 108 ILE n 1 109 VAL n 1 110 GLU n 1 111 ILE n 1 112 GLN n 1 113 GLU n 1 114 ARG n 1 115 GLY n 1 116 ILE n 1 117 VAL n 1 118 GLN n 1 119 ASP n 1 120 VAL n 1 121 TYR n 1 122 SER n 1 123 ILE n 1 124 THR n 1 125 ALA n 1 126 GLU n 1 127 TRP n 1 128 TYR n 1 129 GLU n 1 130 GLU n 1 131 GLY n 1 132 PRO n 1 133 MET n 1 134 ARG n 1 135 PRO n 1 136 LEU n 1 137 ARG n 1 138 VAL n 1 139 ASP n 1 140 LEU n 1 141 GLN n 1 142 PRO n 1 143 SER n 1 144 LEU n 1 145 ILE n 1 146 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 146 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name unidentified _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 32644 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant AI _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pEXP5-NT _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MTA non-polymer . "5'-DEOXY-5'-METHYLTHIOADENOSINE" ? 'C11 H15 N5 O3 S' 297.334 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 1 SER SER A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 MET 3 3 3 MET MET A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 PHE 11 11 11 PHE PHE A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 PHE 16 16 16 PHE PHE A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 ASN 20 20 20 ASN ASN A . n A 1 21 VAL 21 21 21 VAL VAL A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 ASP 23 23 23 ASP ASP A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 PRO 25 25 25 PRO PRO A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 TYR 27 27 27 TYR TYR A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 GLU 30 30 30 GLU GLU A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 LYS 34 34 34 LYS LYS A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 ILE 39 39 39 ILE ILE A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 GLN 43 43 43 GLN GLN A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 PHE 51 51 51 PHE PHE A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 GLN 54 54 54 GLN GLN A . n A 1 55 ARG 55 55 55 ARG ARG A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 TYR 58 58 58 TYR TYR A . n A 1 59 THR 59 59 59 THR THR A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 ARG 62 62 62 ARG ARG A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 THR 68 68 68 THR THR A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 ASN 70 70 70 ASN ASN A . n A 1 71 SER 71 71 71 SER SER A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 GLN 73 73 73 GLN GLN A . n A 1 74 ILE 74 74 74 ILE ILE A . n A 1 75 ILE 75 75 75 ILE ILE A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 ASP 78 78 78 ASP ASP A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 GLY 81 81 81 GLY GLY A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 SER 83 83 83 SER SER A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 GLU 85 85 85 GLU GLU A . n A 1 86 ASP 86 86 86 ASP ASP A . n A 1 87 PHE 87 87 87 PHE PHE A . n A 1 88 THR 88 88 88 THR THR A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 LYS 90 90 90 LYS LYS A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 GLY 95 95 95 GLY GLY A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 ARG 99 99 99 ARG ARG A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 PHE 102 102 102 PHE PHE A . n A 1 103 LYS 103 103 103 LYS LYS A . n A 1 104 GLN 104 104 104 GLN GLN A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 SER 106 106 106 SER SER A . n A 1 107 VAL 107 107 107 VAL VAL A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 GLU 110 110 110 GLU GLU A . n A 1 111 ILE 111 111 111 ILE ILE A . n A 1 112 GLN 112 112 112 GLN GLN A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 ARG 114 114 114 ARG ARG A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 ILE 116 116 116 ILE ILE A . n A 1 117 VAL 117 117 117 VAL VAL A . n A 1 118 GLN 118 118 118 GLN GLN A . n A 1 119 ASP 119 119 119 ASP ASP A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 TYR 121 121 121 TYR TYR A . n A 1 122 SER 122 122 122 SER SER A . n A 1 123 ILE 123 123 123 ILE ILE A . n A 1 124 THR 124 124 124 THR THR A . n A 1 125 ALA 125 125 125 ALA ALA A . n A 1 126 GLU 126 126 126 GLU GLU A . n A 1 127 TRP 127 127 127 TRP TRP A . n A 1 128 TYR 128 128 128 TYR TYR A . n A 1 129 GLU 129 129 129 GLU GLU A . n A 1 130 GLU 130 130 ? ? ? A . n A 1 131 GLY 131 131 ? ? ? A . n A 1 132 PRO 132 132 ? ? ? A . n A 1 133 MET 133 133 ? ? ? A . n A 1 134 ARG 134 134 ? ? ? A . n A 1 135 PRO 135 135 ? ? ? A . n A 1 136 LEU 136 136 ? ? ? A . n A 1 137 ARG 137 137 ? ? ? A . n A 1 138 VAL 138 138 ? ? ? A . n A 1 139 ASP 139 139 ? ? ? A . n A 1 140 LEU 140 140 ? ? ? A . n A 1 141 GLN 141 141 ? ? ? A . n A 1 142 PRO 142 142 ? ? ? A . n A 1 143 SER 143 143 ? ? ? A . n A 1 144 LEU 144 144 ? ? ? A . n A 1 145 ILE 145 145 ? ? ? A . n A 1 146 SER 146 146 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 1 201 131 PO4 PO4 A . C 2 PO4 1 202 132 PO4 PO4 A . D 3 NA 1 203 134 NA NA A . E 4 PRO 1 204 135 PRO PRO A . F 5 MTA 1 205 133 MTA MTA A . G 6 HOH 1 301 178 HOH HOH A . G 6 HOH 2 302 229 HOH HOH A . G 6 HOH 3 303 180 HOH HOH A . G 6 HOH 4 304 179 HOH HOH A . G 6 HOH 5 305 261 HOH HOH A . G 6 HOH 6 306 163 HOH HOH A . G 6 HOH 7 307 138 HOH HOH A . G 6 HOH 8 308 139 HOH HOH A . G 6 HOH 9 309 262 HOH HOH A . G 6 HOH 10 310 156 HOH HOH A . G 6 HOH 11 311 137 HOH HOH A . G 6 HOH 12 312 240 HOH HOH A . G 6 HOH 13 313 197 HOH HOH A . G 6 HOH 14 314 242 HOH HOH A . G 6 HOH 15 315 143 HOH HOH A . G 6 HOH 16 316 199 HOH HOH A . G 6 HOH 17 317 171 HOH HOH A . G 6 HOH 18 318 217 HOH HOH A . G 6 HOH 19 319 231 HOH HOH A . G 6 HOH 20 320 227 HOH HOH A . G 6 HOH 21 321 162 HOH HOH A . G 6 HOH 22 322 210 HOH HOH A . G 6 HOH 23 323 238 HOH HOH A . G 6 HOH 24 324 182 HOH HOH A . G 6 HOH 25 325 258 HOH HOH A . G 6 HOH 26 326 155 HOH HOH A . G 6 HOH 27 327 136 HOH HOH A . G 6 HOH 28 328 187 HOH HOH A . G 6 HOH 29 329 186 HOH HOH A . G 6 HOH 30 330 241 HOH HOH A . G 6 HOH 31 331 161 HOH HOH A . G 6 HOH 32 332 170 HOH HOH A . G 6 HOH 33 333 200 HOH HOH A . G 6 HOH 34 334 147 HOH HOH A . G 6 HOH 35 335 159 HOH HOH A . G 6 HOH 36 336 160 HOH HOH A . G 6 HOH 37 337 152 HOH HOH A . G 6 HOH 38 338 153 HOH HOH A . G 6 HOH 39 339 190 HOH HOH A . G 6 HOH 40 340 177 HOH HOH A . G 6 HOH 41 341 144 HOH HOH A . G 6 HOH 42 342 194 HOH HOH A . G 6 HOH 43 343 233 HOH HOH A . G 6 HOH 44 344 211 HOH HOH A . G 6 HOH 45 345 146 HOH HOH A . G 6 HOH 46 346 220 HOH HOH A . G 6 HOH 47 347 166 HOH HOH A . G 6 HOH 48 348 164 HOH HOH A . G 6 HOH 49 349 221 HOH HOH A . G 6 HOH 50 350 183 HOH HOH A . G 6 HOH 51 351 244 HOH HOH A . G 6 HOH 52 352 236 HOH HOH A . G 6 HOH 53 353 168 HOH HOH A . G 6 HOH 54 354 141 HOH HOH A . G 6 HOH 55 355 154 HOH HOH A . G 6 HOH 56 356 184 HOH HOH A . G 6 HOH 57 357 169 HOH HOH A . G 6 HOH 58 358 189 HOH HOH A . G 6 HOH 59 359 205 HOH HOH A . G 6 HOH 60 360 224 HOH HOH A . G 6 HOH 61 361 149 HOH HOH A . G 6 HOH 62 362 140 HOH HOH A . G 6 HOH 63 363 252 HOH HOH A . G 6 HOH 64 364 148 HOH HOH A . G 6 HOH 65 365 201 HOH HOH A . G 6 HOH 66 366 198 HOH HOH A . G 6 HOH 67 367 207 HOH HOH A . G 6 HOH 68 368 245 HOH HOH A . G 6 HOH 69 369 150 HOH HOH A . G 6 HOH 70 370 158 HOH HOH A . G 6 HOH 71 371 235 HOH HOH A . G 6 HOH 72 372 247 HOH HOH A . G 6 HOH 73 373 145 HOH HOH A . G 6 HOH 74 374 223 HOH HOH A . G 6 HOH 75 375 214 HOH HOH A . G 6 HOH 76 376 192 HOH HOH A . G 6 HOH 77 377 202 HOH HOH A . G 6 HOH 78 378 173 HOH HOH A . G 6 HOH 79 379 175 HOH HOH A . G 6 HOH 80 380 188 HOH HOH A . G 6 HOH 81 381 257 HOH HOH A . G 6 HOH 82 382 239 HOH HOH A . G 6 HOH 83 383 151 HOH HOH A . G 6 HOH 84 384 254 HOH HOH A . G 6 HOH 85 385 230 HOH HOH A . G 6 HOH 86 386 142 HOH HOH A . G 6 HOH 87 387 193 HOH HOH A . G 6 HOH 88 388 165 HOH HOH A . G 6 HOH 89 389 249 HOH HOH A . G 6 HOH 90 390 208 HOH HOH A . G 6 HOH 91 391 185 HOH HOH A . G 6 HOH 92 392 243 HOH HOH A . G 6 HOH 93 393 225 HOH HOH A . G 6 HOH 94 394 213 HOH HOH A . G 6 HOH 95 395 228 HOH HOH A . G 6 HOH 96 396 216 HOH HOH A . G 6 HOH 97 397 226 HOH HOH A . G 6 HOH 98 398 259 HOH HOH A . G 6 HOH 99 399 176 HOH HOH A . G 6 HOH 100 400 191 HOH HOH A . G 6 HOH 101 401 218 HOH HOH A . G 6 HOH 102 402 232 HOH HOH A . G 6 HOH 103 403 237 HOH HOH A . G 6 HOH 104 404 234 HOH HOH A . G 6 HOH 105 405 260 HOH HOH A . G 6 HOH 106 406 209 HOH HOH A . G 6 HOH 107 407 255 HOH HOH A . G 6 HOH 108 408 157 HOH HOH A . G 6 HOH 109 409 167 HOH HOH A . G 6 HOH 110 410 219 HOH HOH A . G 6 HOH 111 411 172 HOH HOH A . G 6 HOH 112 412 215 HOH HOH A . G 6 HOH 113 413 250 HOH HOH A . G 6 HOH 114 414 196 HOH HOH A . G 6 HOH 115 415 204 HOH HOH A . G 6 HOH 116 416 195 HOH HOH A . G 6 HOH 117 417 206 HOH HOH A . G 6 HOH 118 418 222 HOH HOH A . G 6 HOH 119 419 246 HOH HOH A . G 6 HOH 120 420 212 HOH HOH A . G 6 HOH 121 421 253 HOH HOH A . G 6 HOH 122 422 248 HOH HOH A . G 6 HOH 123 423 181 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.16_3549 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? Arcimboldo ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6ZM9 _cell.details ? _cell.formula_units_Z ? _cell.length_a 154.324 _cell.length_a_esd ? _cell.length_b 154.324 _cell.length_b_esd ? _cell.length_c 154.324 _cell.length_c_esd ? _cell.volume 3675364.485 _cell.volume_esd ? _cell.Z_PDB 96 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZM9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 210 _symmetry.space_group_name_Hall 'F 4d 2 3' _symmetry.space_group_name_H-M 'F 41 3 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6ZM9 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.35 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 47.70 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.6 M Ammonium phosphate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 S 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-12-14 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'silicon (1 1 1) channel-cut' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9184 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID23-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9184 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID23-1 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate 16.29 _reflns.entry_id 6ZM9 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.448 _reflns.d_resolution_low 46.54 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 28596 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 41.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 18.8 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.152 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.45 _reflns_shell.d_res_low 1.54 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.91 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 8580 _reflns_shell.percent_possible_all 99.7 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 40.2 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.862 _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.948 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 22.83 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6ZM9 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.45 _refine.ls_d_res_low 46.53 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 28594 _refine.ls_number_reflns_R_free 1429 _refine.ls_number_reflns_R_work 27165 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.96 _refine.ls_percent_reflns_R_free 5.00 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1344 _refine.ls_R_factor_R_free 0.1546 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1334 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.38 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'AB INITIO PHASING' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details 'Random selection' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 12.2012 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1155 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.45 _refine_hist.d_res_low 46.53 _refine_hist.number_atoms_solvent 123 _refine_hist.number_atoms_total 1176 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1014 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 39 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0082 ? 1172 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.0878 ? 1592 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0930 ? 178 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0062 ? 221 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 15.3829 ? 465 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.45 1.50 . . 140 2672 99.72 . . . 0.1871 . 0.1481 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.50 1.56 . . 140 2661 100.00 . . . 0.1441 . 0.1042 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.56 1.63 . . 140 2660 100.00 . . . 0.1372 . 0.0861 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.63 1.72 . . 140 2644 100.00 . . . 0.1409 . 0.0940 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.72 1.82 . . 141 2685 99.96 . . . 0.1248 . 0.1005 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.82 1.96 . . 141 2688 100.00 . . . 0.1422 . 0.0994 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.96 2.16 . . 143 2701 100.00 . . . 0.1522 . 0.1089 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.16 2.48 . . 143 2730 100.00 . . . 0.1248 . 0.1160 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.48 3.12 . . 146 2770 100.00 . . . 0.1738 . 0.1450 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.12 46.53 . . 155 2954 99.94 . . . 0.1680 . 0.1689 . . . . . . . . . . . # _struct.entry_id 6ZM9 _struct.title ;PHAGE SAM LYASE IN COMPLEX WITH S-METHYL-5'-THIOADENOSINE ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6ZM9 _struct_keywords.text 'SAM lyase, S-adenosyl methionine, phage, LYASE' _struct_keywords.pdbx_keywords LYASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 6 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6ZM9 _struct_ref.pdbx_db_accession 6ZM9 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6ZM9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 146 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6ZM9 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 146 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 146 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 9670 ? 1 MORE -83 ? 1 'SSA (A^2)' 15750 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support SAXS _pdbx_struct_assembly_auth_evidence.details 'Size exclusion chromatography and SAXS both agree with a trimer' # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_555 z,x,y 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 3 'crystal symmetry operation' 9_555 y,z,x 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 28 ? GLY A 44 ? THR A 28 GLY A 44 1 ? 17 HELX_P HELX_P2 AA2 SER A 83 ? PHE A 102 ? SER A 83 PHE A 102 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 48 OD2 ? ? ? 1_555 D NA . NA ? ? A ASP 48 A NA 203 1_555 ? ? ? ? ? ? ? 2.692 ? ? metalc2 metalc ? ? D NA . NA ? ? ? 1_555 G HOH . O A ? A NA 203 A HOH 400 5_555 ? ? ? ? ? ? ? 2.751 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id OD2 _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id A _pdbx_struct_conn_angle.ptnr1_label_comp_id ASP _pdbx_struct_conn_angle.ptnr1_label_seq_id 48 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id ASP _pdbx_struct_conn_angle.ptnr1_auth_seq_id 48 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id NA _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id D _pdbx_struct_conn_angle.ptnr2_label_comp_id NA _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id NA _pdbx_struct_conn_angle.ptnr2_auth_seq_id 203 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id O _pdbx_struct_conn_angle.ptnr3_label_alt_id A _pdbx_struct_conn_angle.ptnr3_label_asym_id G _pdbx_struct_conn_angle.ptnr3_label_comp_id HOH _pdbx_struct_conn_angle.ptnr3_label_seq_id . _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id HOH _pdbx_struct_conn_angle.ptnr3_auth_seq_id 400 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 5_555 _pdbx_struct_conn_angle.value 108.9 _pdbx_struct_conn_angle.value_esd ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 50 ? THR A 59 ? SER A 50 THR A 59 AA1 2 LEU A 66 ? ILE A 77 ? LEU A 66 ILE A 77 AA1 3 PHE A 11 ? GLY A 18 ? PHE A 11 GLY A 18 AA1 4 SER A 106 ? GLU A 113 ? SER A 106 GLU A 113 AA1 5 ILE A 116 ? THR A 124 ? ILE A 116 THR A 124 AA1 6 LEU A 2 ? LEU A 6 ? LEU A 2 LEU A 6 AA2 1 ASN A 20 ? VAL A 21 ? ASN A 20 VAL A 21 AA2 2 LYS A 24 ? PRO A 25 ? LYS A 24 PRO A 25 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N TYR A 58 ? N TYR A 58 O VAL A 67 ? O VAL A 67 AA1 2 3 O ILE A 74 ? O ILE A 74 N ILE A 15 ? N ILE A 15 AA1 3 4 N SER A 12 ? N SER A 12 O GLN A 112 ? O GLN A 112 AA1 4 5 N VAL A 107 ? N VAL A 107 O ILE A 123 ? O ILE A 123 AA1 5 6 O VAL A 120 ? O VAL A 120 N LEU A 6 ? N LEU A 6 AA2 1 2 N VAL A 21 ? N VAL A 21 O LYS A 24 ? O LYS A 24 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PO4 201 ? 8 'binding site for residue PO4 A 201' AC2 Software A PO4 202 ? 10 'binding site for residue PO4 A 202' AC3 Software A NA 203 ? 5 'binding site for residue NA A 203' AC4 Software A PRO 204 ? 10 'binding site for residue PRO A 204' AC5 Software A MTA 205 ? 17 'binding site for residue MTA A 205' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 ARG A 99 ? ARG A 99 . ? 1_555 ? 2 AC1 8 ARG A 99 ? ARG A 99 . ? 13_455 ? 3 AC1 8 GLU A 100 ? GLU A 100 . ? 1_555 ? 4 AC1 8 LYS A 103 ? LYS A 103 . ? 1_555 ? 5 AC1 8 TRP A 127 ? TRP A 127 . ? 13_455 ? 6 AC1 8 TRP A 127 ? TRP A 127 . ? 1_555 ? 7 AC1 8 HOH G . ? HOH A 329 . ? 1_555 ? 8 AC1 8 HOH G . ? HOH A 329 . ? 13_455 ? 9 AC2 10 SER A 1 ? SER A 1 . ? 21_455 ? 10 AC2 10 ARG A 99 ? ARG A 99 . ? 13_455 ? 11 AC2 10 ARG A 99 ? ARG A 99 . ? 1_555 ? 12 AC2 10 GLU A 100 ? GLU A 100 . ? 1_555 ? 13 AC2 10 GLU A 100 ? GLU A 100 . ? 13_455 ? 14 AC2 10 HOH G . ? HOH A 301 . ? 13_455 ? 15 AC2 10 HOH G . ? HOH A 301 . ? 1_555 ? 16 AC2 10 HOH G . ? HOH A 302 . ? 13_455 ? 17 AC2 10 HOH G . ? HOH A 308 . ? 13_455 ? 18 AC2 10 HOH G . ? HOH A 308 . ? 1_555 ? 19 AC3 5 ASP A 48 ? ASP A 48 . ? 1_555 ? 20 AC3 5 TYR A 58 ? TYR A 58 . ? 5_555 ? 21 AC3 5 LEU A 79 ? LEU A 79 . ? 1_555 ? 22 AC3 5 MTA F . ? MTA A 205 . ? 5_555 ? 23 AC3 5 HOH G . ? HOH A 400 . ? 5_555 ? 24 AC4 10 ASN A 20 ? ASN A 20 . ? 1_555 ? 25 AC4 10 GLY A 22 ? GLY A 22 . ? 1_555 ? 26 AC4 10 TYR A 58 ? TYR A 58 . ? 1_555 ? 27 AC4 10 GLU A 69 ? GLU A 69 . ? 1_555 ? 28 AC4 10 GLN A 104 ? GLN A 104 . ? 1_555 ? 29 AC4 10 GLU A 105 ? GLU A 105 . ? 1_555 ? 30 AC4 10 MTA F . ? MTA A 205 . ? 1_555 ? 31 AC4 10 HOH G . ? HOH A 310 . ? 1_555 ? 32 AC4 10 HOH G . ? HOH A 327 . ? 1_555 ? 33 AC4 10 HOH G . ? HOH A 338 . ? 1_555 ? 34 AC5 17 PHE A 16 ? PHE A 16 . ? 1_555 ? 35 AC5 17 GLY A 18 ? GLY A 18 . ? 1_555 ? 36 AC5 17 ASP A 48 ? ASP A 48 . ? 9_555 ? 37 AC5 17 ALA A 49 ? ALA A 49 . ? 9_555 ? 38 AC5 17 SER A 50 ? SER A 50 . ? 9_555 ? 39 AC5 17 GLN A 54 ? GLN A 54 . ? 1_555 ? 40 AC5 17 GLY A 56 ? GLY A 56 . ? 1_555 ? 41 AC5 17 TYR A 58 ? TYR A 58 . ? 1_555 ? 42 AC5 17 GLU A 69 ? GLU A 69 . ? 1_555 ? 43 AC5 17 SER A 71 ? SER A 71 . ? 1_555 ? 44 AC5 17 ILE A 75 ? ILE A 75 . ? 9_555 ? 45 AC5 17 ILE A 77 ? ILE A 77 . ? 9_555 ? 46 AC5 17 LEU A 79 ? LEU A 79 . ? 9_555 ? 47 AC5 17 SER A 106 ? SER A 106 . ? 1_555 ? 48 AC5 17 ILE A 108 ? ILE A 108 . ? 1_555 ? 49 AC5 17 NA D . ? NA A 203 . ? 9_555 ? 50 AC5 17 PRO E . ? PRO A 204 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 26 ? ? -130.74 -45.42 2 1 ARG A 62 ? A 96.27 -71.07 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 356 ? G HOH . 2 1 A HOH 413 ? G HOH . # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x+1/4,-z+1/4,y+1/4 3 x+1/4,z+1/4,-y+1/4 4 z+1/4,y+1/4,-x+1/4 5 -z+1/4,y+1/4,x+1/4 6 -y+1/4,x+1/4,z+1/4 7 y+1/4,-x+1/4,z+1/4 8 z,x,y 9 y,z,x 10 -y,-z,x 11 z,-x,-y 12 -y,z,-x 13 -z,-x,y 14 -z,x,-y 15 y,-z,-x 16 x,-y,-z 17 -x,y,-z 18 -x,-y,z 19 y+1/4,x+1/4,-z+1/4 20 -y+1/4,-x+1/4,-z+1/4 21 z+1/4,-y+1/4,x+1/4 22 -z+1/4,-y+1/4,-x+1/4 23 -x+1/4,z+1/4,y+1/4 24 -x+1/4,-z+1/4,-y+1/4 25 x,y+1/2,z+1/2 26 x+1/4,-z+3/4,y+3/4 27 x+1/4,z+3/4,-y+3/4 28 z+1/4,y+3/4,-x+3/4 29 -z+1/4,y+3/4,x+3/4 30 -y+1/4,x+3/4,z+3/4 31 y+1/4,-x+3/4,z+3/4 32 z,x+1/2,y+1/2 33 y,z+1/2,x+1/2 34 -y,-z+1/2,x+1/2 35 z,-x+1/2,-y+1/2 36 -y,z+1/2,-x+1/2 37 -z,-x+1/2,y+1/2 38 -z,x+1/2,-y+1/2 39 y,-z+1/2,-x+1/2 40 x,-y+1/2,-z+1/2 41 -x,y+1/2,-z+1/2 42 -x,-y+1/2,z+1/2 43 y+1/4,x+3/4,-z+3/4 44 -y+1/4,-x+3/4,-z+3/4 45 z+1/4,-y+3/4,x+3/4 46 -z+1/4,-y+3/4,-x+3/4 47 -x+1/4,z+3/4,y+3/4 48 -x+1/4,-z+3/4,-y+3/4 49 x+1/2,y,z+1/2 50 x+3/4,-z+1/4,y+3/4 51 x+3/4,z+1/4,-y+3/4 52 z+3/4,y+1/4,-x+3/4 53 -z+3/4,y+1/4,x+3/4 54 -y+3/4,x+1/4,z+3/4 55 y+3/4,-x+1/4,z+3/4 56 z+1/2,x,y+1/2 57 y+1/2,z,x+1/2 58 -y+1/2,-z,x+1/2 59 z+1/2,-x,-y+1/2 60 -y+1/2,z,-x+1/2 61 -z+1/2,-x,y+1/2 62 -z+1/2,x,-y+1/2 63 y+1/2,-z,-x+1/2 64 x+1/2,-y,-z+1/2 65 -x+1/2,y,-z+1/2 66 -x+1/2,-y,z+1/2 67 y+3/4,x+1/4,-z+3/4 68 -y+3/4,-x+1/4,-z+3/4 69 z+3/4,-y+1/4,x+3/4 70 -z+3/4,-y+1/4,-x+3/4 71 -x+3/4,z+1/4,y+3/4 72 -x+3/4,-z+1/4,-y+3/4 73 x+1/2,y+1/2,z 74 x+3/4,-z+3/4,y+1/4 75 x+3/4,z+3/4,-y+1/4 76 z+3/4,y+3/4,-x+1/4 77 -z+3/4,y+3/4,x+1/4 78 -y+3/4,x+3/4,z+1/4 79 y+3/4,-x+3/4,z+1/4 80 z+1/2,x+1/2,y 81 y+1/2,z+1/2,x 82 -y+1/2,-z+1/2,x 83 z+1/2,-x+1/2,-y 84 -y+1/2,z+1/2,-x 85 -z+1/2,-x+1/2,y 86 -z+1/2,x+1/2,-y 87 y+1/2,-z+1/2,-x 88 x+1/2,-y+1/2,-z 89 -x+1/2,y+1/2,-z 90 -x+1/2,-y+1/2,z 91 y+3/4,x+3/4,-z+1/4 92 -y+3/4,-x+3/4,-z+1/4 93 z+3/4,-y+3/4,x+1/4 94 -z+3/4,-y+3/4,-x+1/4 95 -x+3/4,z+3/4,y+1/4 96 -x+3/4,-z+3/4,-y+1/4 # _pdbx_database_remark.id 700 _pdbx_database_remark.text 'STRAND 6 IN SHEET AA1 IS CONTRIBUTED FROM A SYMMETRY-RELATED MOLECUL' # _pdbx_entry_details.entry_id 6ZM9 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 130 ? A GLU 130 2 1 Y 1 A GLY 131 ? A GLY 131 3 1 Y 1 A PRO 132 ? A PRO 132 4 1 Y 1 A MET 133 ? A MET 133 5 1 Y 1 A ARG 134 ? A ARG 134 6 1 Y 1 A PRO 135 ? A PRO 135 7 1 Y 1 A LEU 136 ? A LEU 136 8 1 Y 1 A ARG 137 ? A ARG 137 9 1 Y 1 A VAL 138 ? A VAL 138 10 1 Y 1 A ASP 139 ? A ASP 139 11 1 Y 1 A LEU 140 ? A LEU 140 12 1 Y 1 A GLN 141 ? A GLN 141 13 1 Y 1 A PRO 142 ? A PRO 142 14 1 Y 1 A SER 143 ? A SER 143 15 1 Y 1 A LEU 144 ? A LEU 144 16 1 Y 1 A ILE 145 ? A ILE 145 17 1 Y 1 A SER 146 ? A SER 146 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HOH O O N N 123 HOH H1 H N N 124 HOH H2 H N N 125 ILE N N N N 126 ILE CA C N S 127 ILE C C N N 128 ILE O O N N 129 ILE CB C N S 130 ILE CG1 C N N 131 ILE CG2 C N N 132 ILE CD1 C N N 133 ILE OXT O N N 134 ILE H H N N 135 ILE H2 H N N 136 ILE HA H N N 137 ILE HB H N N 138 ILE HG12 H N N 139 ILE HG13 H N N 140 ILE HG21 H N N 141 ILE HG22 H N N 142 ILE HG23 H N N 143 ILE HD11 H N N 144 ILE HD12 H N N 145 ILE HD13 H N N 146 ILE HXT H N N 147 LEU N N N N 148 LEU CA C N S 149 LEU C C N N 150 LEU O O N N 151 LEU CB C N N 152 LEU CG C N N 153 LEU CD1 C N N 154 LEU CD2 C N N 155 LEU OXT O N N 156 LEU H H N N 157 LEU H2 H N N 158 LEU HA H N N 159 LEU HB2 H N N 160 LEU HB3 H N N 161 LEU HG H N N 162 LEU HD11 H N N 163 LEU HD12 H N N 164 LEU HD13 H N N 165 LEU HD21 H N N 166 LEU HD22 H N N 167 LEU HD23 H N N 168 LEU HXT H N N 169 LYS N N N N 170 LYS CA C N S 171 LYS C C N N 172 LYS O O N N 173 LYS CB C N N 174 LYS CG C N N 175 LYS CD C N N 176 LYS CE C N N 177 LYS NZ N N N 178 LYS OXT O N N 179 LYS H H N N 180 LYS H2 H N N 181 LYS HA H N N 182 LYS HB2 H N N 183 LYS HB3 H N N 184 LYS HG2 H N N 185 LYS HG3 H N N 186 LYS HD2 H N N 187 LYS HD3 H N N 188 LYS HE2 H N N 189 LYS HE3 H N N 190 LYS HZ1 H N N 191 LYS HZ2 H N N 192 LYS HZ3 H N N 193 LYS HXT H N N 194 MET N N N N 195 MET CA C N S 196 MET C C N N 197 MET O O N N 198 MET CB C N N 199 MET CG C N N 200 MET SD S N N 201 MET CE C N N 202 MET OXT O N N 203 MET H H N N 204 MET H2 H N N 205 MET HA H N N 206 MET HB2 H N N 207 MET HB3 H N N 208 MET HG2 H N N 209 MET HG3 H N N 210 MET HE1 H N N 211 MET HE2 H N N 212 MET HE3 H N N 213 MET HXT H N N 214 MTA CS C N N 215 MTA "S5'" S N N 216 MTA "C5'" C N N 217 MTA "C4'" C N S 218 MTA "O4'" O N N 219 MTA "C2'" C N R 220 MTA "O2'" O N N 221 MTA "C3'" C N S 222 MTA "O3'" O N N 223 MTA "C1'" C N R 224 MTA N9 N Y N 225 MTA C8 C Y N 226 MTA N7 N Y N 227 MTA C5 C Y N 228 MTA C6 C Y N 229 MTA N6 N N N 230 MTA N1 N Y N 231 MTA C2 C Y N 232 MTA N3 N Y N 233 MTA C4 C Y N 234 MTA HCS1 H N N 235 MTA HCS2 H N N 236 MTA HCS3 H N N 237 MTA "H5'1" H N N 238 MTA "H5'2" H N N 239 MTA "H4'" H N N 240 MTA "H2'" H N N 241 MTA "HO2'" H N N 242 MTA "H3'" H N N 243 MTA H3T H N N 244 MTA "H1'" H N N 245 MTA H8 H N N 246 MTA H61 H N N 247 MTA H62 H N N 248 MTA H2 H N N 249 NA NA NA N N 250 PHE N N N N 251 PHE CA C N S 252 PHE C C N N 253 PHE O O N N 254 PHE CB C N N 255 PHE CG C Y N 256 PHE CD1 C Y N 257 PHE CD2 C Y N 258 PHE CE1 C Y N 259 PHE CE2 C Y N 260 PHE CZ C Y N 261 PHE OXT O N N 262 PHE H H N N 263 PHE H2 H N N 264 PHE HA H N N 265 PHE HB2 H N N 266 PHE HB3 H N N 267 PHE HD1 H N N 268 PHE HD2 H N N 269 PHE HE1 H N N 270 PHE HE2 H N N 271 PHE HZ H N N 272 PHE HXT H N N 273 PO4 P P N N 274 PO4 O1 O N N 275 PO4 O2 O N N 276 PO4 O3 O N N 277 PO4 O4 O N N 278 PRO N N N N 279 PRO CA C N S 280 PRO C C N N 281 PRO O O N N 282 PRO CB C N N 283 PRO CG C N N 284 PRO CD C N N 285 PRO OXT O N N 286 PRO H H N N 287 PRO HA H N N 288 PRO HB2 H N N 289 PRO HB3 H N N 290 PRO HG2 H N N 291 PRO HG3 H N N 292 PRO HD2 H N N 293 PRO HD3 H N N 294 PRO HXT H N N 295 SER N N N N 296 SER CA C N S 297 SER C C N N 298 SER O O N N 299 SER CB C N N 300 SER OG O N N 301 SER OXT O N N 302 SER H H N N 303 SER H2 H N N 304 SER HA H N N 305 SER HB2 H N N 306 SER HB3 H N N 307 SER HG H N N 308 SER HXT H N N 309 THR N N N N 310 THR CA C N S 311 THR C C N N 312 THR O O N N 313 THR CB C N R 314 THR OG1 O N N 315 THR CG2 C N N 316 THR OXT O N N 317 THR H H N N 318 THR H2 H N N 319 THR HA H N N 320 THR HB H N N 321 THR HG1 H N N 322 THR HG21 H N N 323 THR HG22 H N N 324 THR HG23 H N N 325 THR HXT H N N 326 TRP N N N N 327 TRP CA C N S 328 TRP C C N N 329 TRP O O N N 330 TRP CB C N N 331 TRP CG C Y N 332 TRP CD1 C Y N 333 TRP CD2 C Y N 334 TRP NE1 N Y N 335 TRP CE2 C Y N 336 TRP CE3 C Y N 337 TRP CZ2 C Y N 338 TRP CZ3 C Y N 339 TRP CH2 C Y N 340 TRP OXT O N N 341 TRP H H N N 342 TRP H2 H N N 343 TRP HA H N N 344 TRP HB2 H N N 345 TRP HB3 H N N 346 TRP HD1 H N N 347 TRP HE1 H N N 348 TRP HE3 H N N 349 TRP HZ2 H N N 350 TRP HZ3 H N N 351 TRP HH2 H N N 352 TRP HXT H N N 353 TYR N N N N 354 TYR CA C N S 355 TYR C C N N 356 TYR O O N N 357 TYR CB C N N 358 TYR CG C Y N 359 TYR CD1 C Y N 360 TYR CD2 C Y N 361 TYR CE1 C Y N 362 TYR CE2 C Y N 363 TYR CZ C Y N 364 TYR OH O N N 365 TYR OXT O N N 366 TYR H H N N 367 TYR H2 H N N 368 TYR HA H N N 369 TYR HB2 H N N 370 TYR HB3 H N N 371 TYR HD1 H N N 372 TYR HD2 H N N 373 TYR HE1 H N N 374 TYR HE2 H N N 375 TYR HH H N N 376 TYR HXT H N N 377 VAL N N N N 378 VAL CA C N S 379 VAL C C N N 380 VAL O O N N 381 VAL CB C N N 382 VAL CG1 C N N 383 VAL CG2 C N N 384 VAL OXT O N N 385 VAL H H N N 386 VAL H2 H N N 387 VAL HA H N N 388 VAL HB H N N 389 VAL HG11 H N N 390 VAL HG12 H N N 391 VAL HG13 H N N 392 VAL HG21 H N N 393 VAL HG22 H N N 394 VAL HG23 H N N 395 VAL HXT H N N 396 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 ILE N CA sing N N 118 ILE N H sing N N 119 ILE N H2 sing N N 120 ILE CA C sing N N 121 ILE CA CB sing N N 122 ILE CA HA sing N N 123 ILE C O doub N N 124 ILE C OXT sing N N 125 ILE CB CG1 sing N N 126 ILE CB CG2 sing N N 127 ILE CB HB sing N N 128 ILE CG1 CD1 sing N N 129 ILE CG1 HG12 sing N N 130 ILE CG1 HG13 sing N N 131 ILE CG2 HG21 sing N N 132 ILE CG2 HG22 sing N N 133 ILE CG2 HG23 sing N N 134 ILE CD1 HD11 sing N N 135 ILE CD1 HD12 sing N N 136 ILE CD1 HD13 sing N N 137 ILE OXT HXT sing N N 138 LEU N CA sing N N 139 LEU N H sing N N 140 LEU N H2 sing N N 141 LEU CA C sing N N 142 LEU CA CB sing N N 143 LEU CA HA sing N N 144 LEU C O doub N N 145 LEU C OXT sing N N 146 LEU CB CG sing N N 147 LEU CB HB2 sing N N 148 LEU CB HB3 sing N N 149 LEU CG CD1 sing N N 150 LEU CG CD2 sing N N 151 LEU CG HG sing N N 152 LEU CD1 HD11 sing N N 153 LEU CD1 HD12 sing N N 154 LEU CD1 HD13 sing N N 155 LEU CD2 HD21 sing N N 156 LEU CD2 HD22 sing N N 157 LEU CD2 HD23 sing N N 158 LEU OXT HXT sing N N 159 LYS N CA sing N N 160 LYS N H sing N N 161 LYS N H2 sing N N 162 LYS CA C sing N N 163 LYS CA CB sing N N 164 LYS CA HA sing N N 165 LYS C O doub N N 166 LYS C OXT sing N N 167 LYS CB CG sing N N 168 LYS CB HB2 sing N N 169 LYS CB HB3 sing N N 170 LYS CG CD sing N N 171 LYS CG HG2 sing N N 172 LYS CG HG3 sing N N 173 LYS CD CE sing N N 174 LYS CD HD2 sing N N 175 LYS CD HD3 sing N N 176 LYS CE NZ sing N N 177 LYS CE HE2 sing N N 178 LYS CE HE3 sing N N 179 LYS NZ HZ1 sing N N 180 LYS NZ HZ2 sing N N 181 LYS NZ HZ3 sing N N 182 LYS OXT HXT sing N N 183 MET N CA sing N N 184 MET N H sing N N 185 MET N H2 sing N N 186 MET CA C sing N N 187 MET CA CB sing N N 188 MET CA HA sing N N 189 MET C O doub N N 190 MET C OXT sing N N 191 MET CB CG sing N N 192 MET CB HB2 sing N N 193 MET CB HB3 sing N N 194 MET CG SD sing N N 195 MET CG HG2 sing N N 196 MET CG HG3 sing N N 197 MET SD CE sing N N 198 MET CE HE1 sing N N 199 MET CE HE2 sing N N 200 MET CE HE3 sing N N 201 MET OXT HXT sing N N 202 MTA CS "S5'" sing N N 203 MTA CS HCS1 sing N N 204 MTA CS HCS2 sing N N 205 MTA CS HCS3 sing N N 206 MTA "S5'" "C5'" sing N N 207 MTA "C5'" "C4'" sing N N 208 MTA "C5'" "H5'1" sing N N 209 MTA "C5'" "H5'2" sing N N 210 MTA "C4'" "O4'" sing N N 211 MTA "C4'" "C3'" sing N N 212 MTA "C4'" "H4'" sing N N 213 MTA "O4'" "C1'" sing N N 214 MTA "C2'" "O2'" sing N N 215 MTA "C2'" "C3'" sing N N 216 MTA "C2'" "C1'" sing N N 217 MTA "C2'" "H2'" sing N N 218 MTA "O2'" "HO2'" sing N N 219 MTA "C3'" "O3'" sing N N 220 MTA "C3'" "H3'" sing N N 221 MTA "O3'" H3T sing N N 222 MTA "C1'" N9 sing N N 223 MTA "C1'" "H1'" sing N N 224 MTA N9 C8 sing Y N 225 MTA N9 C4 sing Y N 226 MTA C8 N7 doub Y N 227 MTA C8 H8 sing N N 228 MTA N7 C5 sing Y N 229 MTA C5 C6 sing Y N 230 MTA C5 C4 doub Y N 231 MTA C6 N6 sing N N 232 MTA C6 N1 doub Y N 233 MTA N6 H61 sing N N 234 MTA N6 H62 sing N N 235 MTA N1 C2 sing Y N 236 MTA C2 N3 doub Y N 237 MTA C2 H2 sing N N 238 MTA N3 C4 sing Y N 239 PHE N CA sing N N 240 PHE N H sing N N 241 PHE N H2 sing N N 242 PHE CA C sing N N 243 PHE CA CB sing N N 244 PHE CA HA sing N N 245 PHE C O doub N N 246 PHE C OXT sing N N 247 PHE CB CG sing N N 248 PHE CB HB2 sing N N 249 PHE CB HB3 sing N N 250 PHE CG CD1 doub Y N 251 PHE CG CD2 sing Y N 252 PHE CD1 CE1 sing Y N 253 PHE CD1 HD1 sing N N 254 PHE CD2 CE2 doub Y N 255 PHE CD2 HD2 sing N N 256 PHE CE1 CZ doub Y N 257 PHE CE1 HE1 sing N N 258 PHE CE2 CZ sing Y N 259 PHE CE2 HE2 sing N N 260 PHE CZ HZ sing N N 261 PHE OXT HXT sing N N 262 PO4 P O1 doub N N 263 PO4 P O2 sing N N 264 PO4 P O3 sing N N 265 PO4 P O4 sing N N 266 PRO N CA sing N N 267 PRO N CD sing N N 268 PRO N H sing N N 269 PRO CA C sing N N 270 PRO CA CB sing N N 271 PRO CA HA sing N N 272 PRO C O doub N N 273 PRO C OXT sing N N 274 PRO CB CG sing N N 275 PRO CB HB2 sing N N 276 PRO CB HB3 sing N N 277 PRO CG CD sing N N 278 PRO CG HG2 sing N N 279 PRO CG HG3 sing N N 280 PRO CD HD2 sing N N 281 PRO CD HD3 sing N N 282 PRO OXT HXT sing N N 283 SER N CA sing N N 284 SER N H sing N N 285 SER N H2 sing N N 286 SER CA C sing N N 287 SER CA CB sing N N 288 SER CA HA sing N N 289 SER C O doub N N 290 SER C OXT sing N N 291 SER CB OG sing N N 292 SER CB HB2 sing N N 293 SER CB HB3 sing N N 294 SER OG HG sing N N 295 SER OXT HXT sing N N 296 THR N CA sing N N 297 THR N H sing N N 298 THR N H2 sing N N 299 THR CA C sing N N 300 THR CA CB sing N N 301 THR CA HA sing N N 302 THR C O doub N N 303 THR C OXT sing N N 304 THR CB OG1 sing N N 305 THR CB CG2 sing N N 306 THR CB HB sing N N 307 THR OG1 HG1 sing N N 308 THR CG2 HG21 sing N N 309 THR CG2 HG22 sing N N 310 THR CG2 HG23 sing N N 311 THR OXT HXT sing N N 312 TRP N CA sing N N 313 TRP N H sing N N 314 TRP N H2 sing N N 315 TRP CA C sing N N 316 TRP CA CB sing N N 317 TRP CA HA sing N N 318 TRP C O doub N N 319 TRP C OXT sing N N 320 TRP CB CG sing N N 321 TRP CB HB2 sing N N 322 TRP CB HB3 sing N N 323 TRP CG CD1 doub Y N 324 TRP CG CD2 sing Y N 325 TRP CD1 NE1 sing Y N 326 TRP CD1 HD1 sing N N 327 TRP CD2 CE2 doub Y N 328 TRP CD2 CE3 sing Y N 329 TRP NE1 CE2 sing Y N 330 TRP NE1 HE1 sing N N 331 TRP CE2 CZ2 sing Y N 332 TRP CE3 CZ3 doub Y N 333 TRP CE3 HE3 sing N N 334 TRP CZ2 CH2 doub Y N 335 TRP CZ2 HZ2 sing N N 336 TRP CZ3 CH2 sing Y N 337 TRP CZ3 HZ3 sing N N 338 TRP CH2 HH2 sing N N 339 TRP OXT HXT sing N N 340 TYR N CA sing N N 341 TYR N H sing N N 342 TYR N H2 sing N N 343 TYR CA C sing N N 344 TYR CA CB sing N N 345 TYR CA HA sing N N 346 TYR C O doub N N 347 TYR C OXT sing N N 348 TYR CB CG sing N N 349 TYR CB HB2 sing N N 350 TYR CB HB3 sing N N 351 TYR CG CD1 doub Y N 352 TYR CG CD2 sing Y N 353 TYR CD1 CE1 sing Y N 354 TYR CD1 HD1 sing N N 355 TYR CD2 CE2 doub Y N 356 TYR CD2 HD2 sing N N 357 TYR CE1 CZ doub Y N 358 TYR CE1 HE1 sing N N 359 TYR CE2 CZ sing Y N 360 TYR CE2 HE2 sing N N 361 TYR CZ OH sing N N 362 TYR OH HH sing N N 363 TYR OXT HXT sing N N 364 VAL N CA sing N N 365 VAL N H sing N N 366 VAL N H2 sing N N 367 VAL CA C sing N N 368 VAL CA CB sing N N 369 VAL CA HA sing N N 370 VAL C O doub N N 371 VAL C OXT sing N N 372 VAL CB CG1 sing N N 373 VAL CB CG2 sing N N 374 VAL CB HB sing N N 375 VAL CG1 HG11 sing N N 376 VAL CG1 HG12 sing N N 377 VAL CG1 HG13 sing N N 378 VAL CG2 HG21 sing N N 379 VAL CG2 HG22 sing N N 380 VAL CG2 HG23 sing N N 381 VAL OXT HXT sing N N 382 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Knut and Alice Wallenberg Foundation' Sweden 'Evolution of new genes and proteins' 1 'Swedish Research Council' Sweden 2017-03827 2 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id MTA _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id MTA _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _space_group.crystal_system cubic _space_group.name_H-M_alt 'F 41 3 2' _space_group.IT_number 210 _space_group.name_Hall 'F 4d 2 3' _space_group.id 1 # _atom_sites.entry_id 6ZM9 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.006480 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006480 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006480 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N NA O P S # loop_